AC  JKD_MA1156.2_JASPAR_rc_shift5
XX
ID  JKD:MA1156.2:JASPAR_rc
XX
DE  oligos_7nt_mkv5_m1 versus JKD_MA1156.2_JASPAR_rc (JKD:MA1156.2:JASPAR_rc); m=26/56; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score=   29.2; -----AAAAmGACAAAA----
P0           a         c         g         t
1            0         0         0         0
2            0         0         0         0
3            0         0         0         0
4            0         0         0         0
5            0         0         0         0
6          427         8        27       134
7          509         0         0        87
8          406        34        99        57
9          525        42        20         9
10         172       331        62        31
11          21         0       564        11
12         583        13         0         0
13           0       596         0         0
14         586         0        10         0
15         587         4         5         0
16         553        13        24         6
17         452        31        30        83
18           0         0         0         0
19           0         0         0         0
20           0         0         0         0
21           0         0         0         0
XX
CC  shift: 5
CC  consensus.strict: -----AAAAcGACAAAA----
CC  consensus.strict.rc: ----TTTTGTCGTTTT-----
CC  consensus.IUPAC: -----AAAAmGACAAAA----
CC  consensus.IUPAC.rc: ----TTTTGTCKTTTT-----
CC  consensus.regexp: -----AAAA[ac]GACAAAA----
CC  consensus.regexp.rc: ----TTTTGTC[GT]TTTT-----
CC  description: oligos_7nt_mkv5_m1 versus JKD_MA1156.2_JASPAR_rc (JKD:MA1156.2:JASPAR_rc); m=26/56; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score=   29.2; -----AAAAmGACAAAA----
XX
//