| Matrix name | Aligned logos | cor |
Ncor |
logoDP |
NsEucl |
NSW |
rcor |
rNcor |
rlogoDP |
rNsEucl |
rNSW |
rank_mean |
match_rank |
Aligned matrices |
|---|
| oligos_7nt_mkv5_m5_shift5 (oligos_7nt_mkv5_m5) |
 |
|
|
|
|
|
|
|
|
|
|
|
|
; oligos_7nt_mkv5_m5; m=0 (reference); ncol1=11; shift=5; ncol=16; -----wtCTTCTTCww
; Alignment reference
a 0 0 0 0 0 1368 1026 268 320 168 243 257 173 371 1374 1368
c 0 0 0 0 0 897 696 4337 184 173 4607 245 278 4340 739 943
g 0 0 0 0 0 863 809 165 170 128 109 171 116 109 802 698
t 0 0 0 0 0 1911 2508 269 4365 4570 80 4366 4472 219 2124 2030
|
| NTM2.DAP_M0677_AthalianaCistrome_shift5 (NTM2.DAP:M0677:AthalianaCistrome) |
 |
0.790 |
0.579 |
3.472 |
0.921 |
0.932 |
8 |
6 |
11 |
3 |
3 |
6.200 |
1 |
; oligos_7nt_mkv5_m5 versus NTM2.DAP_M0677_AthalianaCistrome (NTM2.DAP:M0677:AthalianaCistrome); m=1/34; ncol2=15; w=0; offset=0; strand=D; shift=5; score= 6.2; -----wmCTTsTtyaa
; cor=0.790; Ncor=0.579; logoDP=3.472; NsEucl=0.921; NSW=0.932; rcor=8; rNcor=6; rlogoDP=11; rNsEucl=3; rNSW=3; rank_mean=6.200; match_rank=1
a 0 0 0 0 0 227 264 0 0 0 99 42 82 79 210 215
c 0 0 0 0 0 0 221 587 0 0 267 104 126 230 145 144
g 0 0 0 0 0 73 74 0 41 0 211 28 110 110 123 101
t 0 0 0 0 0 287 28 0 546 587 10 413 269 168 109 127
|
| ANAC004.DAP_M0664_AthalianaCistrome_shift7 (ANAC004.DAP:M0664:AthalianaCistrome) |
 |
0.823 |
0.463 |
3.881 |
0.912 |
0.931 |
2 |
17 |
4 |
7 |
6 |
7.200 |
2 |
; oligos_7nt_mkv5_m5 versus ANAC004.DAP_M0664_AthalianaCistrome (ANAC004.DAP:M0664:AthalianaCistrome); m=2/34; ncol2=14; w=0; offset=2; strand=D; shift=7; score= 7.2; -------CTTsYtywr
; cor=0.823; Ncor=0.463; logoDP=3.881; NsEucl=0.912; NSW=0.931; rcor=2; rNcor=17; rlogoDP=4; rNsEucl=7; rNSW=6; rank_mean=7.200; match_rank=2
a 0 0 0 0 0 0 0 0 0 0 143 14 79 48 156 325
c 0 0 0 0 0 0 0 598 0 0 222 154 102 283 127 57
g 0 0 0 0 0 0 0 0 0 0 220 3 89 55 95 195
t 0 0 0 0 0 0 0 0 598 598 13 427 328 212 220 21
|
| TGA5_2_EEAD0137_EEADannot_rc_shift3 (TGA5_2:EEAD0137:EEADannot_rc) |
 |
0.821 |
0.602 |
0.325 |
0.925 |
0.938 |
3 |
4 |
33 |
1 |
1 |
8.400 |
3 |
; oligos_7nt_mkv5_m5 versus TGA5_2_EEAD0137_EEADannot_rc (TGA5_2:EEAD0137:EEADannot_rc); m=3/34; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score= 8.4; ---tCwTCwYCwtCwy
; cor=0.821; Ncor=0.602; logoDP=0.325; NsEucl=0.925; NSW=0.938; rcor=3; rNcor=4; rlogoDP=33; rNsEucl=1; rNSW=1; rank_mean=8.400; match_rank=3
a 0 0 0 8 0 68 0 0 84 5 0 82 23 0 76 12
c 0 0 0 40 163 13 47 204 19 53 204 15 38 201 26 70
g 0 0 0 38 0 30 9 0 29 0 0 47 6 0 18 12
t 0 0 0 118 41 93 148 0 72 146 0 60 137 3 84 110
|
| NAC005_MA1783.1_JASPAR_shift4 (NAC005:MA1783.1:JASPAR) |
 |
0.788 |
0.456 |
3.519 |
0.921 |
0.932 |
12 |
19 |
8 |
4 |
4 |
9.400 |
4 |
; oligos_7nt_mkv5_m5 versus NAC005_MA1783.1_JASPAR (NAC005:MA1783.1:JASPAR); m=4/34; ncol2=19; w=-1; offset=-1; strand=D; shift=4; score= 9.4; ----TwrCTTsttywa
; cor=0.788; Ncor=0.456; logoDP=3.519; NsEucl=0.921; NSW=0.932; rcor=12; rNcor=19; rlogoDP=8; rNsEucl=4; rNSW=4; rank_mean=9.400; match_rank=4
a 0 0 0 0 222 361 415 0 0 0 236 125 190 180 320 495
c 0 0 0 0 59.322 77.966 183 998 0 0 376 149 149 346 210 153
g 0 0 0 0 27.119 91.525 271 0 3.39 0 286 93.22 171 62.712 115 178
t 0 0 0 0 692 469 131 1.695 996.61 1000 102 632 490 412 354 175
|
| ANAC005.DAP_M0659_AthalianaCistrome_shift4 (ANAC005.DAP:M0659:AthalianaCistrome) |
 |
0.788 |
0.456 |
3.519 |
0.921 |
0.931 |
13 |
20 |
9 |
5 |
5 |
10.400 |
5 |
; oligos_7nt_mkv5_m5 versus ANAC005.DAP_M0659_AthalianaCistrome (ANAC005.DAP:M0659:AthalianaCistrome); m=5/34; ncol2=19; w=-1; offset=-1; strand=D; shift=4; score= 10.4; ----TwrCTTsttywa
; cor=0.788; Ncor=0.456; logoDP=3.519; NsEucl=0.921; NSW=0.931; rcor=13; rNcor=20; rlogoDP=9; rNsEucl=5; rNSW=5; rank_mean=10.400; match_rank=5
a 0 0 0 0 131 213 245 0 0 0 139 74 112 106 189 292
c 0 0 0 0 35 46 108 589 0 0 222 88 88 204 124 90
g 0 0 0 0 16 54 160 0 2 0 169 55 101 37 68 105
t 0 0 0 0 408 277 77 1 588 590 60 373 289 243 209 103
|
| SND3.ampDAP_M0626_AthalianaCistrome_shift3 (SND3.ampDAP:M0626:AthalianaCistrome) |
 |
0.804 |
0.402 |
2.955 |
0.924 |
0.937 |
7 |
33 |
15 |
2 |
2 |
11.800 |
6 |
; oligos_7nt_mkv5_m5 versus SND3.ampDAP_M0626_AthalianaCistrome (SND3.ampDAP:M0626:AthalianaCistrome); m=6/34; ncol2=22; w=-2; offset=-2; strand=D; shift=3; score= 11.8; ---gTwdCTTswtcyw
; cor=0.804; Ncor=0.402; logoDP=2.955; NsEucl=0.924; NSW=0.937; rcor=7; rNcor=33; rlogoDP=15; rNsEucl=2; rNSW=2; rank_mean=11.800; match_rank=6
a 0 0 0 115 124 251 178 8 0 0 69 163 122 133 143 233
c 0 0 0 83 33 13 76 577 0 0 263 86 140 233 188 39
g 0 0 0 268 22 93 163 1 96 0 219 27 99 105 74 69
t 0 0 0 124 411 233 173 4 494 590 39 314 229 119 185 249
|
| SND2.DAP_M0707_AthalianaCistrome_shift7 (SND2.DAP:M0707:AthalianaCistrome) |
 |
0.810 |
0.429 |
2.909 |
0.910 |
0.927 |
4 |
24 |
17 |
8 |
7 |
12.000 |
7 |
; oligos_7nt_mkv5_m5 versus SND2.DAP_M0707_AthalianaCistrome (SND2.DAP:M0707:AthalianaCistrome); m=7/34; ncol2=15; w=0; offset=2; strand=D; shift=7; score= 12; -------CTTswtcyw
; cor=0.810; Ncor=0.429; logoDP=2.909; NsEucl=0.910; NSW=0.927; rcor=4; rNcor=24; rlogoDP=17; rNsEucl=8; rNSW=7; rank_mean=12.000; match_rank=7
a 0 0 0 0 0 0 0 2 3 0 80 191 107 111 146 252
c 0 0 0 0 0 0 0 588 0 4 270 61 143 237 155 16
g 0 0 0 0 0 0 0 0 119 1 232 24 113 130 75 28
t 0 0 0 0 0 0 0 7 475 592 15 321 234 119 221 301
|
| REM21_UN0408.1_JASPAR_shift2 (REM21:UN0408.1:JASPAR) |
 |
0.752 |
0.552 |
5.709 |
0.906 |
0.902 |
21 |
7 |
1 |
12 |
19 |
12.000 |
8 |
; oligos_7nt_mkv5_m5 versus REM21_UN0408.1_JASPAR (REM21:UN0408.1:JASPAR); m=8/34; ncol2=15; w=-3; offset=-3; strand=D; shift=2; score= 12; --htytkyTTCATCwt
; cor=0.752; Ncor=0.552; logoDP=5.709; NsEucl=0.906; NSW=0.902; rcor=21; rNcor=7; rlogoDP=1; rNsEucl=12; rNSW=19; rank_mean=12.000; match_rank=8
a 0 0 306 211 218 224.49 170 224.49 0 0 0 1000 0 0 381 197
c 0 0 327 211 279 204 177 361 0 0 993 0 0 1000 129 238
g 0 0 102 143 163 190 259 122 0 0 6.803 0 0 0 177 149.66
t 0 0 265 435 340 381 395 293 1000 1000 0 0 1000 0 313 415
|
| NAC073_MA1790.1_JASPAR_shift7 (NAC073:MA1790.1:JASPAR) |
 |
0.810 |
0.429 |
2.909 |
0.910 |
0.927 |
5 |
25 |
16 |
9 |
8 |
12.600 |
9 |
; oligos_7nt_mkv5_m5 versus NAC073_MA1790.1_JASPAR (NAC073:MA1790.1:JASPAR); m=9/34; ncol2=15; w=0; offset=2; strand=D; shift=7; score= 12.6; -------CTTswtcyw
; cor=0.810; Ncor=0.429; logoDP=2.909; NsEucl=0.910; NSW=0.927; rcor=5; rNcor=25; rlogoDP=16; rNsEucl=9; rNSW=8; rank_mean=12.600; match_rank=9
a 0 0 0 0 0 0 0 3.35 5.025 0 134 320 179 185.93 245 422
c 0 0 0 0 0 0 0 985 0 6.7 452 102 240 397 260 26.801
g 0 0 0 0 0 0 0 0 199.33 1.675 388.61 40.201 189.28 218 126 46.901
t 0 0 0 0 0 0 0 11.725 796 992 25.126 538 391.96 199.33 370 504
|
| ONAC127_UN0429.2_JASPAR_rc_shift9 (ONAC127:UN0429.2:JASPAR_rc) |
 |
0.864 |
0.550 |
0.509 |
0.897 |
0.926 |
1 |
9 |
25 |
22 |
10 |
13.400 |
10 |
; oligos_7nt_mkv5_m5 versus ONAC127_UN0429.2_JASPAR_rc (ONAC127:UN0429.2:JASPAR_rc); m=10/34; ncol2=7; w=0; offset=4; strand=R; shift=9; score= 13.4; ---------TCTTCCT
; cor=0.864; Ncor=0.550; logoDP=0.509; NsEucl=0.897; NSW=0.926; rcor=1; rNcor=9; rlogoDP=25; rNsEucl=22; rNSW=10; rank_mean=13.400; match_rank=10
a 0 0 0 0 0 0 0 0 0 2 1 0 5 6 6 5
c 0 0 0 0 0 0 0 0 0 2 52 1 0 48 46 1
g 0 0 0 0 0 0 0 0 0 0 1 1 0 0 3 0
t 0 0 0 0 0 0 0 0 0 51 1 53 50 1 0 49
|
| NTL8.DAP_M0671_AthalianaCistrome_shift3 (NTL8.DAP:M0671:AthalianaCistrome) |
 |
0.771 |
0.447 |
3.378 |
0.918 |
0.925 |
16 |
22 |
13 |
6 |
11 |
13.600 |
11 |
; oligos_7nt_mkv5_m5 versus NTL8.DAP_M0671_AthalianaCistrome (NTL8.DAP:M0671:AthalianaCistrome); m=11/34; ncol2=19; w=-2; offset=-2; strand=D; shift=3; score= 13.6; ---kTTyCTTCwyyyt
; cor=0.771; Ncor=0.447; logoDP=3.378; NsEucl=0.918; NSW=0.925; rcor=16; rNcor=22; rlogoDP=13; rNsEucl=6; rNSW=11; rank_mean=13.600; match_rank=11
a 0 0 0 136 23 86 101 0 0 0 36 291 121 78 146 104
c 0 0 0 116 4 5 184 591 71 5 456 67 162 236 151 116
g 0 0 0 189 21 10 87 0 0 0 46 81 71 110 96 145
t 0 0 0 150 543 490 219 0 520 586 53 152 237 167 198 226
|
| ANAC075.DAP_M0685_AthalianaCistrome_rc_shift7 (ANAC075.DAP:M0685:AthalianaCistrome_rc) |
 |
0.807 |
0.427 |
1.243 |
0.909 |
0.926 |
6 |
28 |
18 |
10 |
9 |
14.200 |
12 |
; oligos_7nt_mkv5_m5 versus ANAC075.DAP_M0685_AthalianaCistrome_rc (ANAC075.DAP:M0685:AthalianaCistrome_rc); m=12/34; ncol2=15; w=0; offset=2; strand=R; shift=7; score= 14.2; -------CTTswtcww
; cor=0.807; Ncor=0.427; logoDP=1.243; NsEucl=0.909; NSW=0.926; rcor=6; rNcor=28; rlogoDP=18; rNsEucl=10; rNSW=9; rank_mean=14.200; match_rank=12
a 0 0 0 0 0 0 0 0 0 0 32 200 129 83 170 250
c 0 0 0 0 0 0 0 599 0 3 299 63 139 255 136 6
g 0 0 0 0 0 0 0 0 143 0 253 9 117 134 97 52
t 0 0 0 0 0 0 0 0 456 596 15 327 214 127 196 291
|
| NAC071_MA1789.1_JASPAR_shift7 (NAC071:MA1789.1:JASPAR) |
 |
0.788 |
0.417 |
3.036 |
0.906 |
0.920 |
9 |
29 |
14 |
14 |
12 |
15.600 |
13 |
; oligos_7nt_mkv5_m5 versus NAC071_MA1789.1_JASPAR (NAC071:MA1789.1:JASPAR); m=13/34; ncol2=15; w=0; offset=2; strand=D; shift=7; score= 15.6; -------CTTswtyyt
; cor=0.788; Ncor=0.417; logoDP=3.036; NsEucl=0.906; NSW=0.920; rcor=9; rNcor=29; rlogoDP=14; rNsEucl=14; rNSW=12; rank_mean=15.600; match_rank=13
a 0 0 0 0 0 0 0 5.051 0 0 45.455 414 229 184 116 150
c 0 0 0 0 0 0 0 995 3.367 3.367 508 133 227 380 310 190
g 0 0 0 0 0 0 0 0 134.68 0 338 103 126 134.68 125 123
t 0 0 0 0 0 0 0 0 862 997 108 350 418 301 449 537
|
| PEND_MA0127.1_JASPAR_shift6 (PEND:MA0127.1:JASPAR) |
 |
0.737 |
0.670 |
3.461 |
0.899 |
0.897 |
24 |
1 |
12 |
20 |
22 |
15.800 |
14 |
; oligos_7nt_mkv5_m5 versus PEND_MA0127.1_JASPAR (PEND:MA0127.1:JASPAR); m=14/34; ncol2=10; w=0; offset=1; strand=D; shift=6; score= 15.8; ------AcTTCTTATk
; cor=0.737; Ncor=0.670; logoDP=3.461; NsEucl=0.899; NSW=0.897; rcor=24; rNcor=1; rlogoDP=12; rNsEucl=20; rNSW=22; rank_mean=15.800; match_rank=14
a 0 0 0 0 0 0 30 6 1 4 3 0 2 32 4 2
c 0 0 0 0 0 0 2 19 0 0 33 2 0 7 3 5
g 0 0 0 0 0 0 8 7 2 4 2 2 1 2 0 14
t 0 0 0 0 0 0 2 10 39 34 4 38 39 1 35 21
|
| NTM1.DAP_M0646_AthalianaCistrome_shift6 (NTM1.DAP:M0646:AthalianaCistrome) |
 |
0.732 |
0.457 |
3.527 |
0.903 |
0.906 |
25 |
18 |
7 |
17 |
16 |
16.600 |
15 |
; oligos_7nt_mkv5_m5 versus NTM1.DAP_M0646_AthalianaCistrome (NTM1.DAP:M0646:AthalianaCistrome); m=15/34; ncol2=15; w=0; offset=1; strand=D; shift=6; score= 16.6; ------aCTTsttymh
; cor=0.732; Ncor=0.457; logoDP=3.527; NsEucl=0.903; NSW=0.906; rcor=25; rNcor=18; rlogoDP=7; rNsEucl=17; rNSW=16; rank_mean=16.600; match_rank=15
a 0 0 0 0 0 0 392 0 0 0 122 59 112 71 204 180
c 0 0 0 0 0 0 95 599 0 0 217 129 126 246 175 167
g 0 0 0 0 0 0 112 0 5 0 253 40 140 90 122 86
t 0 0 0 0 0 0 0 0 594 599 7 371 221 192 98 166
|
| ONAC127_UN0429.1_JASPAR_rc_shift4 (ONAC127:UN0429.1:JASPAR_rc) |
 |
0.763 |
0.635 |
0.505 |
0.902 |
0.904 |
19 |
3 |
26 |
18 |
18 |
16.800 |
16 |
; oligos_7nt_mkv5_m5 versus ONAC127_UN0429.1_JASPAR_rc (ONAC127:UN0429.1:JASPAR_rc); m=16/34; ncol2=11; w=-1; offset=-1; strand=R; shift=4; score= 16.8; ----brTCTTCCTcy-
; cor=0.763; Ncor=0.635; logoDP=0.505; NsEucl=0.902; NSW=0.904; rcor=19; rNcor=3; rlogoDP=26; rNsEucl=18; rNSW=18; rank_mean=16.800; match_rank=16
a 0 0 0 0 5 17 2 1 0 5 6 6 5 7 10 0
c 0 0 0 0 21 11 2 52 1 0 48 46 1 27 15 0
g 0 0 0 0 15 15 0 1 1 0 0 3 0 10 9 0
t 0 0 0 0 14 12 51 1 53 50 1 0 49 11 21 0
|
| ANAC071.DAP_M0632_AthalianaCistrome_rc_shift7 (ANAC071.DAP:M0632:AthalianaCistrome_rc) |
 |
0.788 |
0.417 |
1.190 |
0.906 |
0.920 |
10 |
30 |
20 |
15 |
13 |
17.600 |
17 |
; oligos_7nt_mkv5_m5 versus ANAC071.DAP_M0632_AthalianaCistrome_rc (ANAC071.DAP:M0632:AthalianaCistrome_rc); m=17/34; ncol2=15; w=0; offset=2; strand=R; shift=7; score= 17.6; -------CTTswtyyt
; cor=0.788; Ncor=0.417; logoDP=1.190; NsEucl=0.906; NSW=0.920; rcor=10; rNcor=30; rlogoDP=20; rNsEucl=15; rNSW=13; rank_mean=17.600; match_rank=17
a 0 0 0 0 0 0 0 3 0 0 27 246 136 109 69 89
c 0 0 0 0 0 0 0 591 2 2 302 79 135 226 184 113
g 0 0 0 0 0 0 0 0 80 0 201 61 75 80 74 73
t 0 0 0 0 0 0 0 0 512 592 64 208 248 179 267 319
|
| SND2.ampDAP_M0628_AthalianaCistrome_rc_shift7 (SND2.ampDAP:M0628:AthalianaCistrome_rc) |
 |
0.788 |
0.417 |
1.210 |
0.906 |
0.920 |
11 |
31 |
19 |
16 |
14 |
18.200 |
18 |
; oligos_7nt_mkv5_m5 versus SND2.ampDAP_M0628_AthalianaCistrome_rc (SND2.ampDAP:M0628:AthalianaCistrome_rc); m=18/34; ncol2=15; w=0; offset=2; strand=R; shift=7; score= 18.2; -------CKTswtcww
; cor=0.788; Ncor=0.417; logoDP=1.210; NsEucl=0.906; NSW=0.920; rcor=11; rNcor=31; rlogoDP=19; rNsEucl=16; rNSW=14; rank_mean=18.200; match_rank=18
a 0 0 0 0 0 0 0 1 0 0 78 203 128 104 176 251
c 0 0 0 0 0 0 0 587 0 0 266 74 124 252 131 2
g 0 0 0 0 0 0 0 0 178 0 244 18 117 146 121 34
t 0 0 0 0 0 0 0 8 418 596 8 301 227 94 168 309
|
| AT5G18090.DAP_M0009_AthalianaCistrome_rc_shift2 (AT5G18090.DAP:M0009:AthalianaCistrome_rc) |
 |
0.752 |
0.552 |
0.301 |
0.906 |
0.902 |
22 |
8 |
34 |
13 |
20 |
19.400 |
19 |
; oligos_7nt_mkv5_m5 versus AT5G18090.DAP_M0009_AthalianaCistrome_rc (AT5G18090.DAP:M0009:AthalianaCistrome_rc); m=19/34; ncol2=15; w=-3; offset=-3; strand=R; shift=2; score= 19.4; --htytkyTTCATCwt
; cor=0.752; Ncor=0.552; logoDP=0.301; NsEucl=0.906; NSW=0.902; rcor=22; rNcor=8; rlogoDP=34; rNsEucl=13; rNSW=20; rank_mean=19.400; match_rank=19
a 0 0 45 31 32 33 25 33 0 0 0 147 0 0 56 29
c 0 0 48 31 41 30 26 53 0 0 146 0 0 147 19 35
g 0 0 15 21 24 28 38 18 0 0 1 0 0 0 26 22
t 0 0 39 64 50 56 58 43 147 147 0 0 147 0 46 61
|
| XP_013591813.1_RWPRK_1_AT1G74480_EEAD0667_EEADannot_shift2 (XP_013591813.1_RWPRK_1_AT1G74480:EEAD0667:EEADannot) |
 |
0.739 |
0.475 |
3.794 |
0.885 |
0.880 |
23 |
16 |
6 |
28 |
26 |
19.800 |
20 |
; oligos_7nt_mkv5_m5 versus XP_013591813.1_RWPRK_1_AT1G74480_EEAD0667_EEADannot (XP_013591813.1_RWPRK_1_AT1G74480:EEAD0667:EEADannot); m=20/34; ncol2=12; w=-3; offset=-3; strand=D; shift=2; score= 19.8; --CgbTTCrwCTTC--
; cor=0.739; Ncor=0.475; logoDP=3.794; NsEucl=0.885; NSW=0.880; rcor=23; rNcor=16; rlogoDP=6; rNsEucl=28; rNSW=26; rank_mean=19.800; match_rank=20
a 0 0 0 1 6 0 0 14 48 29 13 0 1 0 0 0
c 0 0 99 22 26 1 15 83 0 10 76 2 5 95 0 0
g 0 0 0 58 28 0 0 2 51 11 1 0 0 0 0 0
t 0 0 1 19 40 99 85 1 1 50 10 98 94 5 0 0
|
| ANAC096.DAP_M0645_AthalianaCistrome_rc_shift4 (ANAC096.DAP:M0645:AthalianaCistrome_rc) |
 |
0.705 |
0.484 |
0.423 |
0.907 |
0.905 |
32 |
14 |
28 |
11 |
17 |
20.400 |
21 |
; oligos_7nt_mkv5_m5 versus ANAC096.DAP_M0645_AthalianaCistrome_rc (ANAC096.DAP:M0645:AthalianaCistrome_rc); m=21/34; ncol2=16; w=-1; offset=-1; strand=R; shift=4; score= 20.4; ----TTrCTTswtyyt
; cor=0.705; Ncor=0.484; logoDP=0.423; NsEucl=0.907; NSW=0.905; rcor=32; rNcor=14; rlogoDP=28; rNsEucl=11; rNSW=17; rank_mean=20.400; match_rank=21
a 0 0 0 0 6 53 190 3 0 0 42 283 138 88 105 137
c 0 0 0 0 0 0 84 594 0 0 271 65 136 212 172 104
g 0 0 0 0 0 17 195 0 44 0 217 48 109 106 59 133
t 0 0 0 0 591 527 128 0 553 597 67 201 214 191 261 223
|
| DcWRKY75_EEAD0058_EEADannot_rc_shift5 (DcWRKY75:EEAD0058:EEADannot_rc) |
 |
0.766 |
0.487 |
0.985 |
0.881 |
0.901 |
17 |
13 |
22 |
29 |
21 |
20.400 |
22 |
; oligos_7nt_mkv5_m5 versus DcWRKY75_EEAD0058_EEADannot_rc (DcWRKY75:EEAD0058:EEADannot_rc); m=22/34; ncol2=7; w=0; offset=0; strand=R; shift=5; score= 20.4; -----AvmTTCT----
; cor=0.766; Ncor=0.487; logoDP=0.985; NsEucl=0.881; NSW=0.901; rcor=17; rNcor=13; rlogoDP=22; rNsEucl=29; rNSW=21; rank_mean=20.400; match_rank=22
a 0 0 0 0 0 83 33 50 0 17 0 17 0 0 0 0
c 0 0 0 0 0 0 33 33 0 0 100 0 0 0 0 0
g 0 0 0 0 0 17 33 17 0 0 0 0 0 0 0 0
t 0 0 0 0 0 0 1 0 100 83 0 83 0 0 0 0
|
| AL2G34360.t1_RWPRK_1_AT1G74480_EEAD0584_EEADannot_shift1 (AL2G34360.t1_RWPRK_1_AT1G74480:EEAD0584:EEADannot) |
 |
0.714 |
0.476 |
3.863 |
0.889 |
0.876 |
29 |
15 |
5 |
26 |
28 |
20.600 |
23 |
; oligos_7nt_mkv5_m5 versus AL2G34360.t1_RWPRK_1_AT1G74480_EEAD0584_EEADannot (AL2G34360.t1_RWPRK_1_AT1G74480:EEAD0584:EEADannot); m=23/34; ncol2=14; w=-4; offset=-4; strand=D; shift=1; score= 20.6; -ACskTTCrwCTTCy-
; cor=0.714; Ncor=0.476; logoDP=3.863; NsEucl=0.889; NSW=0.876; rcor=29; rNcor=15; rlogoDP=5; rNsEucl=26; rNSW=28; rank_mean=20.600; match_rank=23
a 0 78 0 0 7 0 1 13 54 28 7 0 0 1 0 0
c 0 4 98 26 24 1 15 81 0 8 85 1 12 96 63 0
g 0 4 0 52 27 0 0 4 46 14 1 0 0 0 1 0
t 0 14 2 22 42 99 84 2 0 50 7 99 88 3 36 0
|
| NTL8_MA1678.2_JASPAR_rc_shift3 (NTL8:MA1678.2:JASPAR_rc) |
 |
0.706 |
0.598 |
0.472 |
0.897 |
0.884 |
30 |
5 |
27 |
21 |
24 |
21.400 |
24 |
; oligos_7nt_mkv5_m5 versus NTL8_MA1678.2_JASPAR_rc (NTL8:MA1678.2:JASPAR_rc); m=24/34; ncol2=13; w=-2; offset=-2; strand=R; shift=3; score= 21.4; ---wagGTTTCTTCaw
; cor=0.706; Ncor=0.598; logoDP=0.472; NsEucl=0.897; NSW=0.884; rcor=30; rNcor=5; rlogoDP=27; rNsEucl=21; rNSW=24; rank_mean=21.400; match_rank=24
a 0 0 0 303 406 198 47 23 18 73 12 16 9 78 397 264
c 0 0 0 154 142 96 40 16 3 35 956 42 10 669 175 197
g 0 0 0 201 189 468 850 10 4 79 6 12 5 171 165 197
t 0 0 0 324 245 220 45 933 957 795 8 912 958 64 245 324
|
| AT5G18090_UN0847.1_JASPAR_shift8 (AT5G18090:UN0847.1:JASPAR) |
 |
0.784 |
0.428 |
5.687 |
0.844 |
0.855 |
14 |
26 |
2 |
33 |
32 |
21.400 |
25 |
; oligos_7nt_mkv5_m5 versus AT5G18090_UN0847.1_JASPAR (AT5G18090:UN0847.1:JASPAR); m=25/34; ncol2=6; w=0; offset=3; strand=D; shift=8; score= 21.4; --------TTCATC--
; cor=0.784; Ncor=0.428; logoDP=5.687; NsEucl=0.844; NSW=0.855; rcor=14; rNcor=26; rlogoDP=2; rNsEucl=33; rNSW=32; rank_mean=21.400; match_rank=25
a 0 0 0 0 0 0 0 0 0 0 0 1000 0 0 0 0
c 0 0 0 0 0 0 0 0 0 0 993 0 0 1000 0 0
g 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0
t 0 0 0 0 0 0 0 0 1000 1000 0 0 1000 0 0 0
|
| REM21_UN0408.2_JASPAR_shift8 (REM21:UN0408.2:JASPAR) |
 |
0.784 |
0.428 |
5.681 |
0.844 |
0.855 |
15 |
27 |
3 |
32 |
31 |
21.600 |
26 |
; oligos_7nt_mkv5_m5 versus REM21_UN0408.2_JASPAR (REM21:UN0408.2:JASPAR); m=26/34; ncol2=6; w=0; offset=3; strand=D; shift=8; score= 21.6; --------TTCATC--
; cor=0.784; Ncor=0.428; logoDP=5.681; NsEucl=0.844; NSW=0.855; rcor=15; rNcor=27; rlogoDP=3; rNsEucl=32; rNSW=31; rank_mean=21.600; match_rank=26
a 0 0 0 0 0 0 0 0 0 0 0 1000 0 0 0 0
c 0 0 0 0 0 0 0 0 0 0 993 0 0 1000 0 0
g 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0
t 0 0 0 0 0 0 0 0 1000 1000 0 0 1000 0 0 0
|
| SND3.DAP_M0629_AthalianaCistrome_rc_shift7 (SND3.DAP:M0629:AthalianaCistrome_rc) |
 |
0.758 |
0.401 |
1.187 |
0.900 |
0.910 |
20 |
34 |
21 |
19 |
15 |
21.800 |
27 |
; oligos_7nt_mkv5_m5 versus SND3.DAP_M0629_AthalianaCistrome_rc (SND3.DAP:M0629:AthalianaCistrome_rc); m=27/34; ncol2=15; w=0; offset=2; strand=R; shift=7; score= 21.8; -------CKTswtchw
; cor=0.758; Ncor=0.401; logoDP=1.187; NsEucl=0.900; NSW=0.910; rcor=20; rNcor=34; rlogoDP=21; rNsEucl=19; rNSW=15; rank_mean=21.800; match_rank=27
a 0 0 0 0 0 0 0 3 0 0 56 193 127 96 152 270
c 0 0 0 0 0 0 0 595 0 0 222 76 144 277 164 24
g 0 0 0 0 0 0 0 0 179 0 307 28 129 131 123 53
t 0 0 0 0 0 0 0 0 419 598 13 301 198 94 159 251
|
| Solyc03g116010.3.1_RWPRK_1_AT1G74480_EEAD0647_EEADannot_shift0 (Solyc03g116010.3.1_RWPRK_1_AT1G74480:EEAD0647:EEADannot) |
 |
0.706 |
0.441 |
3.500 |
0.889 |
0.877 |
31 |
23 |
10 |
25 |
27 |
23.200 |
28 |
; oligos_7nt_mkv5_m5 versus Solyc03g116010.3.1_RWPRK_1_AT1G74480_EEAD0647_EEADannot (Solyc03g116010.3.1_RWPRK_1_AT1G74480:EEAD0647:EEADannot); m=28/34; ncol2=15; w=-5; offset=-5; strand=D; shift=0; score= 23.2; GACgbTTCrwCTTCy-
; cor=0.706; Ncor=0.441; logoDP=3.500; NsEucl=0.889; NSW=0.877; rcor=31; rNcor=23; rlogoDP=10; rNsEucl=25; rNSW=27; rank_mean=23.200; match_rank=28
a 20 74 0 0 16 0 0 16 52 30 12 0 4 2 2 0
c 0 2 99 20 26 1 22 74 0 8 81 2 2 93 66 0
g 80 8 0 66 29 0 0 8 48 8 1 0 4 2 1 0
t 0 16 1 14 29 99 78 2 0 54 6 98 90 3 31 0
|
| Carub.0002s2128.1_RWPRK_1_AT1G74480_EEAD0605_EEADannot_rc_shift1 (Carub.0002s2128.1_RWPRK_1_AT1G74480:EEAD0605:EEADannot_rc) |
 |
0.700 |
0.513 |
0.672 |
0.896 |
0.882 |
34 |
12 |
24 |
23 |
25 |
23.600 |
29 |
; oligos_7nt_mkv5_m5 versus Carub.0002s2128.1_RWPRK_1_AT1G74480_EEAD0605_EEADannot_rc (Carub.0002s2128.1_RWPRK_1_AT1G74480:EEAD0605:EEADannot_rc); m=29/34; ncol2=15; w=-4; offset=-4; strand=R; shift=1; score= 23.6; -ACskTTCrwCTTCyy
; cor=0.700; Ncor=0.513; logoDP=0.672; NsEucl=0.896; NSW=0.882; rcor=34; rNcor=12; rlogoDP=24; rNsEucl=23; rNSW=25; rank_mean=23.600; match_rank=29
a 0 74 0 1 3 0 1 11 51 29 10 0 2 0 0 16
c 0 7 98 28 22 1 12 82 0 8 79 3 8 95 65 43
g 0 4 0 49 28 0 0 4 48 14 1 0 0 0 1 14
t 0 15 2 22 47 99 87 3 1 49 10 97 90 5 34 27
|
| CDF5_UN0360.1_JASPAR_rc_shift5 (CDF5:UN0360.1:JASPAR_rc) |
 |
0.701 |
0.637 |
0.358 |
0.887 |
0.871 |
33 |
2 |
31 |
27 |
29 |
24.400 |
30 |
; oligos_7nt_mkv5_m5 versus CDF5_UN0360.1_JASPAR_rc (CDF5:UN0360.1:JASPAR_rc); m=30/34; ncol2=10; w=0; offset=0; strand=R; shift=5; score= 24.4; -----yaCTTTTTaw-
; cor=0.701; Ncor=0.637; logoDP=0.358; NsEucl=0.887; NSW=0.871; rcor=33; rNcor=2; rlogoDP=31; rNsEucl=27; rNSW=29; rank_mean=24.400; match_rank=30
a 0 0 0 0 0 914 1646 0 0 1 1 19 0 1169 1388 0
c 0 0 0 0 0 985 724 3821 0 0 0 0 0 926 645 0
g 0 0 0 0 0 325 510 0 0 0 0 0 0 900 482 0
t 0 0 0 0 0 1597 941 0 3821 3820 3820 3802 3821 826 1306 0
|
| bZIP44_2_EEAD0099_EEADannot_rc_shift6 (bZIP44_2:EEAD0099:EEADannot_rc) |
 |
0.723 |
0.452 |
0.395 |
0.895 |
0.890 |
27 |
21 |
29 |
24 |
23 |
24.800 |
31 |
; oligos_7nt_mkv5_m5 versus bZIP44_2_EEAD0099_EEADannot_rc (bZIP44_2:EEAD0099:EEADannot_rc); m=31/34; ncol2=15; w=0; offset=1; strand=R; shift=6; score= 24.8; ------TCATCaTCay
; cor=0.723; Ncor=0.452; logoDP=0.395; NsEucl=0.895; NSW=0.890; rcor=27; rNcor=21; rlogoDP=29; rNsEucl=24; rNSW=23; rank_mean=24.800; match_rank=31
a 0 0 0 0 0 0 7 0 136 1 0 99 11 0 107 10
c 0 0 0 0 0 0 14 199 18 20 180 31 19 193 38 65
g 0 0 0 0 0 0 10 0 20 21 1 38 2 3 27 0
t 0 0 0 0 0 0 169 1 26 158 19 32 168 4 28 125
|
| ONAC127_UN0430.2_JASPAR_rc_shift5 (ONAC127:UN0430.2:JASPAR_rc) |
 |
0.730 |
0.531 |
0.364 |
0.869 |
0.863 |
26 |
10 |
30 |
30 |
30 |
25.200 |
32 |
; oligos_7nt_mkv5_m5 versus ONAC127_UN0430.2_JASPAR_rc (ONAC127:UN0430.2:JASPAR_rc); m=32/34; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 25.2; -----CTTTTCTT---
; cor=0.730; Ncor=0.531; logoDP=0.364; NsEucl=0.869; NSW=0.863; rcor=26; rNcor=10; rlogoDP=30; rNsEucl=30; rNSW=30; rank_mean=25.200; match_rank=32
a 0 0 0 0 0 2 6 0 1 2 2 1 3 0 0 0
c 0 0 0 0 0 56 3 5 1 7 62 0 0 0 0 0
g 0 0 0 0 0 7 1 0 5 2 0 0 0 0 0 0
t 0 0 0 0 0 3 58 63 61 57 4 67 65 0 0 0
|
| NTL8_MA1678.3_JASPAR_rc_shift6 (NTL8:MA1678.3:JASPAR_rc) |
 |
0.720 |
0.524 |
0.928 |
0.864 |
0.852 |
28 |
11 |
23 |
31 |
33 |
25.200 |
33 |
; oligos_7nt_mkv5_m5 versus NTL8_MA1678.3_JASPAR_rc (NTL8:MA1678.3:JASPAR_rc); m=33/34; ncol2=8; w=0; offset=1; strand=R; shift=6; score= 25.2; ------GTTTCTTC--
; cor=0.720; Ncor=0.524; logoDP=0.928; NsEucl=0.864; NSW=0.852; rcor=28; rNcor=11; rlogoDP=23; rNsEucl=31; rNSW=33; rank_mean=25.200; match_rank=33
a 0 0 0 0 0 0 47 23 18 73 12 16 9 78 0 0
c 0 0 0 0 0 0 40 16 3 35 956 42 10 669 0 0
g 0 0 0 0 0 0 850 10 4 79 6 12 5 171 0 0
t 0 0 0 0 0 0 45 933 957 795 8 912 958 64 0 0
|
| DOF2.2_MA1272.3_JASPAR_rc_shift7 (DOF2.2:MA1272.3:JASPAR_rc) |
 |
0.763 |
0.416 |
0.342 |
0.837 |
0.841 |
18 |
32 |
32 |
34 |
34 |
30.000 |
34 |
; oligos_7nt_mkv5_m5 versus DOF2.2_MA1272.3_JASPAR_rc (DOF2.2:MA1272.3:JASPAR_rc); m=34/34; ncol2=6; w=0; offset=2; strand=R; shift=7; score= 30; -------CTTTTT---
; cor=0.763; Ncor=0.416; logoDP=0.342; NsEucl=0.837; NSW=0.841; rcor=18; rNcor=32; rlogoDP=32; rNsEucl=34; rNSW=34; rank_mean=30.000; match_rank=34
a 0 0 0 0 0 0 0 0 0 2 0 9 0 0 0 0
c 0 0 0 0 0 0 0 1086 0 0 0 0 0 0 0 0
g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
t 0 0 0 0 0 0 0 0 1086 1084 1086 1077 1086 0 0 0
|