| Matrix name | Aligned logos | cor |
Ncor |
logoDP |
NsEucl |
NSW |
rcor |
rNcor |
rlogoDP |
rNsEucl |
rNSW |
rank_mean |
match_rank |
Aligned matrices |
|---|
| oligos_7nt_mkv5_m1_shift6 (oligos_7nt_mkv5_m1) |
 |
|
|
|
|
|
|
|
|
|
|
|
|
; oligos_7nt_mkv5_m1; m=0 (reference); ncol1=15; shift=6; ncol=21; ------wwaAGAAAAAATaww
; Alignment reference
a 0 0 0 0 0 0 671 689 1288 1349 0 1782 1679 1707 1729 1657 1697 0 1161 716 776
c 0 0 0 0 0 0 331 270 142 136 105 36 69 54 39 61 61 78 175 225 238
g 0 0 0 0 0 0 316 364 192 142 1675 44 63 66 47 47 70 85 217 322 294
t 0 0 0 0 0 0 591 586 287 282 129 47 98 82 94 144 81 1746 356 646 601
|
| Zm00001d027846_MA1823.1_JASPAR_shift5 (Zm00001d027846:MA1823.1:JASPAR) |
 |
0.879 |
0.604 |
4.208 |
0.933 |
0.951 |
3 |
4 |
30 |
2 |
3 |
8.400 |
1 |
; oligos_7nt_mkv5_m1 versus Zm00001d027846_MA1823.1_JASPAR (Zm00001d027846:MA1823.1:JASPAR); m=1/56; ncol2=12; w=-1; offset=-1; strand=D; shift=5; score= 8.4; -----arAAAGAAAAar----
; cor=0.879; Ncor=0.604; logoDP=4.208; NsEucl=0.933; NSW=0.951; rcor=3; rNcor=4; rlogoDP=30; rNsEucl=2; rNSW=3; rank_mean=8.400; match_rank=1
a 0 0 0 0 0 430 399 818 893 929 23 896 915 914 752 429 424 0 0 0 0
c 0 0 0 0 0 159 157 46 17 6 24 29 11 27 53 154 130 0 0 0 0
g 0 0 0 0 0 223 264 86 44 30 866 38 28 33 123 233 261 0 0 0 0
t 0 0 0 0 0 175 167 37 33 22 74 24 33 13 59 171 172 0 0 0 0
|
| SGR5_MA1159.2_JASPAR_shift4 (SGR5:MA1159.2:JASPAR) |
 |
0.802 |
0.519 |
6.071 |
0.906 |
0.902 |
7 |
11 |
5 |
18 |
5 |
9.200 |
2 |
; oligos_7nt_mkv5_m1 versus SGR5_MA1159.2_JASPAR (SGR5:MA1159.2:JASPAR); m=2/56; ncol2=13; w=-2; offset=-2; strand=D; shift=4; score= 9.2; ----raAwAAGACAAAA----
; cor=0.802; Ncor=0.519; logoDP=6.071; NsEucl=0.906; NSW=0.902; rcor=7; rNcor=11; rlogoDP=5; rNsEucl=18; rNSW=5; rank_mean=9.200; match_rank=2
a 0 0 0 0 343 340 433 310 486 532 33 591 0 592 598 560 428 0 0 0 0
c 0 0 0 0 57 48 0 16 22 4 0 6 599 1 1 10 34 0 0 0 0
g 0 0 0 0 160 116 44 27 92 22 566 0 1 7 0 11 21 0 0 0 0
t 0 0 0 0 40 96 123 247 0 42 1 3 0 0 1 19 117 0 0 0 0
|
| Zm00001d027846_MA1823.2_JASPAR_shift7 (Zm00001d027846:MA1823.2:JASPAR) |
 |
0.942 |
0.503 |
4.138 |
0.937 |
0.969 |
1 |
21 |
31 |
1 |
1 |
11.000 |
3 |
; oligos_7nt_mkv5_m1 versus Zm00001d027846_MA1823.2_JASPAR (Zm00001d027846:MA1823.2:JASPAR); m=3/56; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 11; -------AAAGAAAA------
; cor=0.942; Ncor=0.503; logoDP=4.138; NsEucl=0.937; NSW=0.969; rcor=1; rNcor=21; rlogoDP=31; rNsEucl=1; rNSW=1; rank_mean=11.000; match_rank=3
a 0 0 0 0 0 0 0 818 893 929 23 896 915 914 752 0 0 0 0 0 0
c 0 0 0 0 0 0 0 46 17 6 24 29 11 27 53 0 0 0 0 0 0
g 0 0 0 0 0 0 0 86 44 30 866 38 28 33 123 0 0 0 0 0 0
t 0 0 0 0 0 0 0 37 33 22 74 24 33 13 59 0 0 0 0 0 0
|
| Medtr8g106590.1_M0145_1.02_CISBP_shift13 (Medtr8g106590.1:M0145_1.02:CISBP) |
 |
0.887 |
0.473 |
3.374 |
0.923 |
0.953 |
2 |
31 |
34 |
3 |
2 |
14.400 |
4 |
; oligos_7nt_mkv5_m1 versus Medtr8g106590.1_M0145_1.02_CISBP (Medtr8g106590.1:M0145_1.02:CISBP); m=4/56; ncol2=8; w=0; offset=7; strand=D; shift=13; score= 14.4; -------------AAAWTAAT
; cor=0.887; Ncor=0.473; logoDP=3.374; NsEucl=0.923; NSW=0.953; rcor=2; rNcor=31; rlogoDP=34; rNsEucl=3; rNSW=2; rank_mean=14.400; match_rank=4
a 0 0 0 0 0 0 0 0 0 0 0 0 0 84 88 83 69 17 83 76 18
c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4
g 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 17 31 83 17 21 78
|
| Adof1.ampDAP_M0277_AthalianaCistrome_shift4 (Adof1.ampDAP:M0277:AthalianaCistrome) |
 |
0.715 |
0.511 |
4.776 |
0.920 |
0.904 |
34 |
15 |
19 |
4 |
4 |
15.200 |
5 |
; oligos_7nt_mkv5_m1 versus Adof1.ampDAP_M0277_AthalianaCistrome (Adof1.ampDAP:M0277:AthalianaCistrome); m=5/56; ncol2=21; w=-2; offset=-2; strand=D; shift=4; score= 15.2; ----araaaasAAAAAGtwaa
; cor=0.715; Ncor=0.511; logoDP=4.776; NsEucl=0.920; NSW=0.904; rcor=34; rNcor=15; rlogoDP=19; rNsEucl=4; rNSW=4; rank_mean=15.200; match_rank=5
a 0 0 0 0 314 249 320 315 266 228 133 477 457 591 591 585 0 8 324 380 296
c 0 0 0 0 50 75 79 55 71 99 172 34 22 0 0 0 0 133 44 28 106
g 0 0 0 0 100 153 97 112 125 119 187 51 6 0 0 6 591 77 64 135 94
t 0 0 0 0 127 114 95 109 129 145 99 29 106 0 0 0 0 373 159 48 95
|
| SGR5_MA1159.1_JASPAR_shift3 (SGR5:MA1159.1:JASPAR) |
 |
0.756 |
0.504 |
6.134 |
0.902 |
0.886 |
12 |
19 |
4 |
21 |
23 |
15.800 |
6 |
; oligos_7nt_mkv5_m1 versus SGR5_MA1159.1_JASPAR (SGR5:MA1159.1:JASPAR); m=6/56; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score= 15.8; ---araAwAAGACAAAAw---
; cor=0.756; Ncor=0.504; logoDP=6.134; NsEucl=0.902; NSW=0.886; rcor=12; rNcor=19; rlogoDP=4; rNsEucl=21; rNSW=23; rank_mean=15.800; match_rank=6
a 0 0 0 293 343 340 433 310 486 532 33 591 0 592 598 560 428 285 0 0 0
c 0 0 0 126 57 48 0 16 22 4 0 6 599 1 1 10 34 83 0 0 0
g 0 0 0 40 160 116 44 27 92 22 566 0 1 7 0 11 21 43 0 0 0
t 0 0 0 141 40 96 123 247 0 42 1 3 0 0 1 19 117 189 0 0 0
|
| C3H67_UN0851.1_JASPAR_shift11 (C3H67:UN0851.1:JASPAR) |
 |
0.757 |
0.505 |
5.313 |
0.896 |
0.891 |
11 |
18 |
12 |
25 |
19 |
17.000 |
7 |
; oligos_7nt_mkv5_m1 versus C3H67_UN0851.1_JASPAR (C3H67:UN0851.1:JASPAR); m=7/56; ncol2=10; w=0; offset=5; strand=D; shift=11; score= 17; -----------AAAAAGTdaa
; cor=0.757; Ncor=0.505; logoDP=5.313; NsEucl=0.896; NSW=0.891; rcor=11; rNcor=18; rlogoDP=12; rNsEucl=25; rNSW=19; rank_mean=17.000; match_rank=7
a 0 0 0 0 0 0 0 0 0 0 0 911 836 990 1000 985 0 8 341 678 523
c 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 75 51 48 216
g 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 15 1000 225 275 155 68
t 0 0 0 0 0 0 0 0 0 0 0 40 161 0 0 0 0 691 331 118 191
|
| REM19.DAP_M0725_AthalianaCistrome_shift5 (REM19.DAP:M0725:AthalianaCistrome) |
 |
0.712 |
0.623 |
5.526 |
0.908 |
0.880 |
36 |
2 |
10 |
14 |
28 |
18.000 |
8 |
; oligos_7nt_mkv5_m1 versus REM19.DAP_M0725_AthalianaCistrome (REM19.DAP:M0725:AthalianaCistrome); m=8/56; ncol2=15; w=-1; offset=-1; strand=D; shift=5; score= 18; -----ramAAAAAAAAAaAa-
; cor=0.712; Ncor=0.623; logoDP=5.526; NsEucl=0.908; NSW=0.880; rcor=36; rNcor=2; rlogoDP=10; rNsEucl=14; rNSW=28; rank_mean=18.000; match_rank=8
a 0 0 0 0 0 287 333 289 476 451 569 480 571 523 549 490 526 387 394 383 0
c 0 0 0 0 0 90 139 221 31 26 3 61 1 44 0 16 6 32 120 51 0
g 0 0 0 0 0 186 46 63 66 96 0 7 0 0 3 9 41 34 59 87 0
t 0 0 0 0 0 10 55 0 0 0 1 25 1 6 21 58 0 120 0 52 0
|
| DOF1.5_MA1279.2_JASPAR_shift6 (DOF1.5:MA1279.2:JASPAR) |
 |
0.701 |
0.657 |
4.658 |
0.918 |
0.899 |
52 |
1 |
20 |
6 |
11 |
18.000 |
9 |
; oligos_7nt_mkv5_m1 versus DOF1.5_MA1279.2_JASPAR (DOF1.5:MA1279.2:JASPAR); m=9/56; ncol2=16; w=0; offset=0; strand=D; shift=6; score= 18; ------aaaarAAAAAGtraa
; cor=0.701; Ncor=0.657; logoDP=4.658; NsEucl=0.918; NSW=0.899; rcor=52; rNcor=1; rlogoDP=20; rNsEucl=6; rNSW=11; rank_mean=18.000; match_rank=9
a 0 0 0 0 0 0 329 329 301 251 184 440 486 599 599 591 0 46 232 325 400
c 0 0 0 0 0 0 75 55 61 73 94 34 8 1 0 0 0 35 22 122 81
g 0 0 0 0 0 0 121 114 143 147 199 71 1 0 1 9 600 140 273 41 38
t 0 0 0 0 0 0 75 102 95 129 123 55 105 0 0 0 0 379 73 112 81
|
| dof24.ampDAP_M0269_AthalianaCistrome_shift5 (dof24.ampDAP:M0269:AthalianaCistrome) |
 |
0.702 |
0.614 |
5.189 |
0.913 |
0.895 |
47 |
3 |
14 |
12 |
18 |
18.800 |
10 |
; oligos_7nt_mkv5_m1 versus dof24.ampDAP_M0269_AthalianaCistrome (dof24.ampDAP:M0269:AthalianaCistrome); m=10/56; ncol2=15; w=-1; offset=-1; strand=D; shift=5; score= 18.8; -----wwaaacAWAAAGTda-
; cor=0.702; Ncor=0.614; logoDP=5.189; NsEucl=0.913; NSW=0.895; rcor=47; rNcor=3; rlogoDP=14; rNsEucl=12; rNSW=18; rank_mean=18.800; match_rank=10
a 0 0 0 0 0 261 265 287 237 233 122 551 433 597 597 580 0 10 215 324 0
c 0 0 0 0 0 80 63 76 93 122 202 0 0 0 0 0 0 55 32 38 0
g 0 0 0 0 0 102 107 95 134 126 137 29 0 0 0 17 597 120 173 146 0
t 0 0 0 0 0 154 162 139 133 116 136 17 164 0 0 0 0 412 177 89 0
|
| MYBR111_Mo17_1_EEAD0456_EEADannot_shift10 (MYBR111_Mo17_1:EEAD0456:EEADannot) |
 |
0.726 |
0.533 |
6.202 |
0.895 |
0.878 |
24 |
7 |
3 |
28 |
32 |
18.800 |
11 |
; oligos_7nt_mkv5_m1 versus MYBR111_Mo17_1_EEAD0456_EEADannot (MYBR111_Mo17_1:EEAD0456:EEADannot); m=11/56; ncol2=11; w=0; offset=4; strand=D; shift=10; score= 18.8; ----------rrAAAwATCwr
; cor=0.726; Ncor=0.533; logoDP=6.202; NsEucl=0.895; NSW=0.878; rcor=24; rNcor=7; rlogoDP=3; rNsEucl=28; rNSW=32; rank_mean=18.800; match_rank=11
a 0 0 0 0 0 0 0 0 0 0 40 50 97 100 100 36 100 0 0 27 28
c 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 100 18 16
g 0 0 0 0 0 0 0 0 0 0 41 36 0 0 0 10 0 0 0 2 43
t 0 0 0 0 0 0 0 0 0 0 14 8 3 0 0 54 0 100 0 53 13
|
| At4g38000.ampDAP_M0275_AthalianaCistrome_shift10 (At4g38000.ampDAP:M0275:AthalianaCistrome) |
 |
0.725 |
0.532 |
5.092 |
0.897 |
0.884 |
27 |
8 |
15 |
24 |
24 |
19.600 |
12 |
; oligos_7nt_mkv5_m1 versus At4g38000.ampDAP_M0275_AthalianaCistrome (At4g38000.ampDAP:M0275:AthalianaCistrome); m=12/56; ncol2=11; w=0; offset=4; strand=D; shift=10; score= 19.6; ----------sAWAAAGTwaa
; cor=0.725; Ncor=0.532; logoDP=5.092; NsEucl=0.897; NSW=0.884; rcor=27; rNcor=8; rlogoDP=15; rNsEucl=24; rNSW=24; rank_mean=19.600; match_rank=12
a 0 0 0 0 0 0 0 0 0 0 131 524 423 599 599 599 0 20 231 346 302
c 0 0 0 0 0 0 0 0 0 0 181 23 0 0 0 0 0 46 35 35 80
g 0 0 0 0 0 0 0 0 0 0 213 24 0 0 0 0 599 110 74 145 90
t 0 0 0 0 0 0 0 0 0 0 74 28 176 0 0 0 0 423 259 73 127
|
| DOF5.1_MA1281.2_JASPAR_shift5 (DOF5.1:MA1281.2:JASPAR) |
 |
0.704 |
0.556 |
3.090 |
0.918 |
0.898 |
41 |
6 |
36 |
9 |
14 |
21.200 |
13 |
; oligos_7nt_mkv5_m1 versus DOF5.1_MA1281.2_JASPAR (DOF5.1:MA1281.2:JASPAR); m=13/56; ncol2=19; w=-1; offset=-1; strand=D; shift=5; score= 21.2; -----AAAAAGwaAAaaraaa
; cor=0.704; Ncor=0.556; logoDP=3.090; NsEucl=0.918; NSW=0.898; rcor=41; rNcor=6; rlogoDP=36; rNsEucl=9; rNSW=14; rank_mean=21.200; match_rank=13
a 0 0 0 0 0 355 412 512 505 464 2 150 306 369 354 320 328 225 261 329 349
c 0 0 0 0 0 25 4 0 0 2 0 93 16 0 76 39 20 37 61 16 0
g 0 0 0 0 0 90 13 1 0 49 511 82 71 104 58 99 80 149 96 103 73
t 0 0 0 0 0 45 86 2 10 0 2 190 122 42 27 57 87 104 97 67 93
|
| AT5G63260.ampDAP_M0343_AthalianaCistrome_shift10 (AT5G63260.ampDAP:M0343:AthalianaCistrome) |
 |
0.720 |
0.528 |
5.316 |
0.895 |
0.880 |
32 |
9 |
11 |
27 |
30 |
21.800 |
14 |
; oligos_7nt_mkv5_m1 versus AT5G63260.ampDAP_M0343_AthalianaCistrome (AT5G63260.ampDAP:M0343:AthalianaCistrome); m=14/56; ncol2=11; w=0; offset=4; strand=D; shift=10; score= 21.8; ----------sAAAAAGTdaa
; cor=0.720; Ncor=0.528; logoDP=5.316; NsEucl=0.895; NSW=0.880; rcor=32; rNcor=9; rlogoDP=11; rNsEucl=27; rNSW=30; rank_mean=21.800; match_rank=14
a 0 0 0 0 0 0 0 0 0 0 101 547 502 594 600 591 0 5 205 407 314
c 0 0 0 0 0 0 0 0 0 0 199 0 1 6 0 0 0 45 31 29 130
g 0 0 0 0 0 0 0 0 0 0 173 29 0 0 0 9 600 135 165 93 41
t 0 0 0 0 0 0 0 0 0 0 127 24 97 0 0 0 0 415 199 71 115
|
| COG1_MA1279.1_JASPAR_shift2 (COG1:MA1279.1:JASPAR) |
 |
0.701 |
0.501 |
4.658 |
0.918 |
0.899 |
52 |
24 |
20 |
6 |
11 |
22.600 |
15 |
; oligos_7nt_mkv5_m1 versus COG1_MA1279.1_JASPAR (COG1:MA1279.1:JASPAR); m=15/56; ncol2=21; w=-4; offset=-4; strand=D; shift=2; score= 22.6; --aaaaaaaarAAAAAGtraa
; cor=0.701; Ncor=0.501; logoDP=4.658; NsEucl=0.918; NSW=0.899; rcor=52; rNcor=24; rlogoDP=20; rNsEucl=6; rNSW=11; rank_mean=22.600; match_rank=15
a 0 0 257 259 333 318 329 329 301 251 184 440 486 599 599 591 0 46 232 325 400
c 0 0 82 86 60 62 75 55 61 73 94 34 8 1 0 0 0 35 22 122 81
g 0 0 140 118 105 101 121 114 143 147 199 71 1 0 1 9 600 140 273 41 38
t 0 0 121 137 102 119 75 102 95 129 123 55 105 0 0 0 0 379 73 112 81
|
| At3g13040.DAP_M0399_AthalianaCistrome_shift8 (At3g13040.DAP:M0399:AthalianaCistrome) |
 |
0.773 |
0.464 |
5.883 |
0.887 |
0.886 |
10 |
33 |
8 |
43 |
22 |
23.200 |
16 |
; oligos_7nt_mkv5_m1 versus At3g13040.DAP_M0399_AthalianaCistrome (At3g13040.DAP:M0399:AthalianaCistrome); m=16/56; ncol2=9; w=0; offset=2; strand=D; shift=8; score= 23.2; --------awGAAAACa----
; cor=0.773; Ncor=0.464; logoDP=5.883; NsEucl=0.887; NSW=0.886; rcor=10; rNcor=33; rlogoDP=8; rNsEucl=43; rNSW=22; rank_mean=23.200; match_rank=16
a 0 0 0 0 0 0 0 0 76 72 0 154 157 150 157 0 88 0 0 0 0
c 0 0 0 0 0 0 0 0 20 10 0 0 0 0 0 157 23 0 0 0 0
g 0 0 0 0 0 0 0 0 24 25 157 3 0 7 0 0 13 0 0 0 0
t 0 0 0 0 0 0 0 0 37 50 0 0 0 0 0 0 33 0 0 0 0
|
| NTM1.ampDAP_M0681_AthalianaCistrome_shift1 (NTM1.ampDAP:M0681:AthalianaCistrome) |
 |
0.700 |
0.500 |
4.458 |
0.918 |
0.899 |
55 |
25 |
23 |
5 |
10 |
23.600 |
17 |
; oligos_7nt_mkv5_m1 versus NTM1.ampDAP_M0681_AthalianaCistrome (NTM1.ampDAP:M0681:AthalianaCistrome); m=17/56; ncol2=21; w=-5; offset=-5; strand=D; shift=1; score= 23.6; -aaaaaaaarraAAAAGyaaa
; cor=0.700; Ncor=0.500; logoDP=4.458; NsEucl=0.918; NSW=0.899; rcor=55; rNcor=25; rlogoDP=23; rNsEucl=5; rNSW=10; rank_mean=23.600; match_rank=17
a 0 318 274 309 367 349 358 337 289 224 166 405 484 598 598 546 0 25 380 382 327
c 0 85 99 94 54 55 47 48 68 94 137 72 0 0 0 0 0 166 17 43 115
g 0 87 115 83 83 116 104 131 115 160 176 68 15 0 0 52 598 11 121 111 57
t 0 108 110 112 94 78 89 82 126 120 119 53 99 0 0 0 0 396 80 62 99
|
| AT5G02460_MA1281.1_JASPAR_shift4 (AT5G02460:MA1281.1:JASPAR) |
 |
0.704 |
0.503 |
3.090 |
0.918 |
0.898 |
41 |
20 |
36 |
9 |
14 |
24.000 |
18 |
; oligos_7nt_mkv5_m1 versus AT5G02460_MA1281.1_JASPAR (AT5G02460:MA1281.1:JASPAR); m=18/56; ncol2=21; w=-2; offset=-2; strand=D; shift=4; score= 24; ----aAAAAAGwaAAaaraaa
; cor=0.704; Ncor=0.503; logoDP=3.090; NsEucl=0.918; NSW=0.898; rcor=41; rNcor=20; rlogoDP=36; rNsEucl=9; rNSW=14; rank_mean=24.000; match_rank=18
a 0 0 0 0 217 355 412 512 505 464 2 150 306 369 354 320 328 225 261 329 349
c 0 0 0 0 86 25 4 0 0 2 0 93 16 0 76 39 20 37 61 16 0
g 0 0 0 0 116 90 13 1 0 49 511 82 71 104 58 99 80 149 96 103 73
t 0 0 0 0 96 45 86 2 10 0 2 190 122 42 27 57 87 104 97 67 93
|
| At1g64620.ampDAP_M0251_AthalianaCistrome_shift10 (At1g64620.ampDAP:M0251:AthalianaCistrome) |
 |
0.712 |
0.522 |
5.265 |
0.895 |
0.878 |
37 |
10 |
13 |
29 |
33 |
24.400 |
19 |
; oligos_7nt_mkv5_m1 versus At1g64620.ampDAP_M0251_AthalianaCistrome (At1g64620.ampDAP:M0251:AthalianaCistrome); m=19/56; ncol2=11; w=0; offset=4; strand=D; shift=10; score= 24.4; ----------sAAAAAGkwaa
; cor=0.712; Ncor=0.522; logoDP=5.265; NsEucl=0.895; NSW=0.878; rcor=37; rNcor=10; rlogoDP=13; rNsEucl=29; rNSW=33; rank_mean=24.400; match_rank=19
a 0 0 0 0 0 0 0 0 0 0 146 560 490 600 600 599 0 33 260 358 308
c 0 0 0 0 0 0 0 0 0 0 163 5 0 0 0 0 0 57 30 22 97
g 0 0 0 0 0 0 0 0 0 0 161 12 0 0 0 1 600 183 94 126 77
t 0 0 0 0 0 0 0 0 0 0 130 23 110 0 0 0 0 327 216 94 118
|
| ONAC127_UN0430.2_JASPAR_shift8 (ONAC127:UN0430.2:JASPAR) |
 |
0.815 |
0.435 |
4.434 |
0.889 |
0.902 |
5 |
50 |
25 |
38 |
7 |
25.000 |
20 |
; oligos_7nt_mkv5_m1 versus ONAC127_UN0430.2_JASPAR (ONAC127:UN0430.2:JASPAR); m=20/56; ncol2=8; w=0; offset=2; strand=D; shift=8; score= 25; --------AAGAAAAG-----
; cor=0.815; Ncor=0.435; logoDP=4.434; NsEucl=0.889; NSW=0.902; rcor=5; rNcor=50; rlogoDP=25; rNsEucl=38; rNSW=7; rank_mean=25.000; match_rank=20
a 0 0 0 0 0 0 0 0 65 67 4 57 61 63 58 3 0 0 0 0 0
c 0 0 0 0 0 0 0 0 0 0 0 2 5 0 1 7 0 0 0 0 0
g 0 0 0 0 0 0 0 0 0 0 62 7 1 5 3 56 0 0 0 0 0
t 0 0 0 0 0 0 0 0 3 1 2 2 1 0 6 2 0 0 0 0 0
|
| SGR5.ampDAP_M0303_AthalianaCistrome_rc_shift2 (SGR5.ampDAP:M0303:AthalianaCistrome_rc) |
 |
0.782 |
0.453 |
0.500 |
0.906 |
0.902 |
9 |
38 |
55 |
19 |
6 |
25.400 |
21 |
; oligos_7nt_mkv5_m1 versus SGR5.ampDAP_M0303_AthalianaCistrome_rc (SGR5.ampDAP:M0303:AthalianaCistrome_rc); m=21/56; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score= 25.4; --aaraawrAGACAAAa----
; cor=0.782; Ncor=0.453; logoDP=0.500; NsEucl=0.906; NSW=0.902; rcor=9; rNcor=38; rlogoDP=55; rNsEucl=19; rNSW=6; rank_mean=25.400; match_rank=21
a 0 0 201 274 297 317 405 309 406 516 30 597 0 595 582 472 350 0 0 0 0
c 0 0 137 119 81 69 5 44 34 0 0 1 598 0 2 21 57 0 0 0 0
g 0 0 112 88 161 126 45 59 158 39 568 0 0 3 14 68 79 0 0 0 0
t 0 0 148 117 59 86 143 186 0 43 0 0 0 0 0 37 112 0 0 0 0
|
| AT5G60130.DAP_M0001_AthalianaCistrome_shift8 (AT5G60130.DAP:M0001:AthalianaCistrome) |
 |
0.720 |
0.446 |
3.161 |
0.912 |
0.899 |
31 |
42 |
35 |
13 |
9 |
26.000 |
22 |
; oligos_7nt_mkv5_m1 versus AT5G60130.DAP_M0001_AthalianaCistrome (AT5G60130.DAP:M0001:AthalianaCistrome); m=22/56; ncol2=19; w=0; offset=2; strand=D; shift=8; score= 26; --------AAGcAAAwwmtAA
; cor=0.720; Ncor=0.446; logoDP=3.161; NsEucl=0.912; NSW=0.899; rcor=31; rNcor=42; rlogoDP=35; rNsEucl=13; rNSW=9; rank_mean=26.000; match_rank=22
a 0 0 0 0 0 0 0 0 421 464 21 121 532 510 473 376 217 221 149 438 501
c 0 0 0 0 0 0 0 0 31 18 12 276 19 1 0 22 117 159 80 22 6
g 0 0 0 0 0 0 0 0 83 57 538 128 33 24 9 26 82 72 87 84 24
t 0 0 0 0 0 0 0 0 65 61 29 75 16 65 118 176 184 148 284 56 69
|
| AT5G66940.ampDAP_M0257_AthalianaCistrome_rc_shift4 (AT5G66940.ampDAP:M0257:AthalianaCistrome_rc) |
 |
0.703 |
0.502 |
0.957 |
0.918 |
0.898 |
46 |
22 |
43 |
8 |
13 |
26.400 |
23 |
; oligos_7nt_mkv5_m1 versus AT5G66940.ampDAP_M0257_AthalianaCistrome_rc (AT5G66940.ampDAP:M0257:AthalianaCistrome_rc); m=23/56; ncol2=21; w=-2; offset=-2; strand=R; shift=4; score= 26.4; ----aaaaarsAAAAAGtara
; cor=0.703; Ncor=0.502; logoDP=0.957; NsEucl=0.918; NSW=0.898; rcor=46; rNcor=22; rlogoDP=43; rNsEucl=8; rNSW=13; rank_mean=26.400; match_rank=23
a 0 0 0 0 344 315 356 377 333 231 140 416 495 600 600 596 0 42 361 370 349
c 0 0 0 0 56 76 65 54 59 81 170 61 0 0 0 0 0 139 15 33 88
g 0 0 0 0 94 116 87 109 123 183 197 70 0 0 0 3 600 80 88 151 66
t 0 0 0 0 106 93 92 60 85 105 93 53 105 0 0 1 0 339 136 46 97
|
| REM19.ampDAP_M0724_AthalianaCistrome_shift0 (REM19.ampDAP:M0724:AthalianaCistrome) |
 |
0.702 |
0.501 |
5.929 |
0.907 |
0.870 |
48 |
23 |
7 |
16 |
41 |
27.000 |
24 |
; oligos_7nt_mkv5_m1 versus REM19.ampDAP_M0724_AthalianaCistrome (REM19.ampDAP:M0724:AthalianaCistrome); m=24/56; ncol2=21; w=-6; offset=-6; strand=D; shift=0; score= 27; wwkamAAAAAAAAAAAAAawa
; cor=0.702; Ncor=0.501; logoDP=5.929; NsEucl=0.907; NSW=0.870; rcor=48; rNcor=23; rlogoDP=7; rNsEucl=16; rNSW=41; rank_mean=27.000; match_rank=24
a 226 148 111 253 248 403 499 498 481 534 523 535 519 540 504 489 471 392 333 349 235
c 30 65 50 60 214 136 43 10 61 2 2 3 14 0 6 44 1 47 102 23 105
g 84 14 201 104 36 13 1 32 9 16 13 0 13 4 22 19 35 34 90 24 104
t 212 325 190 135 54 0 9 12 1 0 14 14 6 8 20 0 45 79 27 156 108
|
| AtIDD11.DAP_M0325_AthalianaCistrome_rc_shift3 (AtIDD11.DAP:M0325:AthalianaCistrome_rc) |
 |
0.711 |
0.508 |
0.601 |
0.917 |
0.898 |
38 |
17 |
54 |
11 |
16 |
27.200 |
25 |
; oligos_7nt_mkv5_m1 versus AtIDD11.DAP_M0325_AthalianaCistrome_rc (AtIDD11.DAP:M0325:AthalianaCistrome_rc); m=25/56; ncol2=21; w=-3; offset=-3; strand=R; shift=3; score= 27.2; ---araAaAmGACAAAaawaa
; cor=0.711; Ncor=0.508; logoDP=0.601; NsEucl=0.917; NSW=0.898; rcor=38; rNcor=17; rlogoDP=54; rNsEucl=11; rNSW=16; rank_mean=27.200; match_rank=25
a 0 0 0 298 156 359 421 336 437 305 34 573 0 568 551 454 353 279 249 267 243
c 0 0 0 70 125 29 26 50 46 185 0 1 573 0 9 28 42 81 90 71 100
g 0 0 0 127 197 77 22 104 60 60 536 0 0 6 14 76 94 83 77 113 114
t 0 0 0 79 96 109 105 84 31 24 4 0 1 0 0 16 85 131 158 123 117
|
| JKD_MA1156.2_JASPAR_rc_shift5 (JKD:MA1156.2:JASPAR_rc) |
 |
0.743 |
0.511 |
0.731 |
0.893 |
0.875 |
16 |
16 |
48 |
31 |
35 |
29.200 |
26 |
; oligos_7nt_mkv5_m1 versus JKD_MA1156.2_JASPAR_rc (JKD:MA1156.2:JASPAR_rc); m=26/56; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score= 29.2; -----AAAAmGACAAAA----
; cor=0.743; Ncor=0.511; logoDP=0.731; NsEucl=0.893; NSW=0.875; rcor=16; rNcor=16; rlogoDP=48; rNsEucl=31; rNSW=35; rank_mean=29.200; match_rank=26
a 0 0 0 0 0 427 509 406 525 172 21 583 0 586 587 553 452 0 0 0 0
c 0 0 0 0 0 8 0 34 42 331 0 13 596 0 4 13 31 0 0 0 0
g 0 0 0 0 0 27 0 99 20 62 564 0 0 10 5 24 30 0 0 0 0
t 0 0 0 0 0 134 87 57 9 31 11 0 0 0 0 6 83 0 0 0 0
|
| VRN1.ampDAP_M0006_AthalianaCistrome_rc_shift5 (VRN1.ampDAP:M0006:AthalianaCistrome_rc) |
 |
0.706 |
0.557 |
1.453 |
0.907 |
0.869 |
40 |
5 |
42 |
17 |
42 |
29.200 |
27 |
; oligos_7nt_mkv5_m1 versus VRN1.ampDAP_M0006_AthalianaCistrome_rc (VRN1.ampDAP:M0006:AthalianaCistrome_rc); m=27/56; ncol2=19; w=-1; offset=-1; strand=R; shift=5; score= 29.2; -----mmaAAAAAAAAAAAAa
; cor=0.706; Ncor=0.557; logoDP=1.453; NsEucl=0.907; NSW=0.869; rcor=40; rNcor=5; rlogoDP=42; rNsEucl=17; rNSW=42; rank_mean=29.200; match_rank=27
a 0 0 0 0 0 144 155 237 278 276 276 333 370 368 367 373 366 368 364 324 214
c 0 0 0 0 0 104 135 85 45 44 54 26 3 5 2 0 7 5 7 20 49
g 0 0 0 0 0 79 40 45 41 49 43 14 0 0 4 0 0 0 2 4 55
t 0 0 0 0 0 46 43 6 9 4 0 0 0 0 0 0 0 0 0 25 55
|
| ENY_UN0398.2_JASPAR_rc_shift5 (ENY:UN0398.2:JASPAR_rc) |
 |
0.746 |
0.513 |
0.684 |
0.892 |
0.872 |
14 |
13 |
52 |
32 |
37 |
29.600 |
28 |
; oligos_7nt_mkv5_m1 versus ENY_UN0398.2_JASPAR_rc (ENY:UN0398.2:JASPAR_rc); m=28/56; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score= 29.6; -----aAaAmGACAAAA----
; cor=0.746; Ncor=0.513; logoDP=0.684; NsEucl=0.892; NSW=0.872; rcor=14; rNcor=13; rlogoDP=52; rNsEucl=32; rNSW=37; rank_mean=29.600; match_rank=28
a 0 0 0 0 0 637 820 661 911 250 0 993 0 997 988 945 785 0 0 0 0
c 0 0 0 0 0 32 3 62 45 627 0 5 1000 0 7 13 50 0 0 0 0
g 0 0 0 0 0 92 2 133 40 96 1000 2 0 3 5 34 50 0 0 0 0
t 0 0 0 0 0 239 175 145 3 27 0 0 0 0 0 8 114 0 0 0 0
|
| LCL1_MA1187.1_JASPAR_rc_shift12 (LCL1:MA1187.1:JASPAR_rc) |
 |
0.785 |
0.442 |
4.586 |
0.885 |
0.881 |
8 |
44 |
22 |
48 |
27 |
29.800 |
29 |
; oligos_7nt_mkv5_m1 versus LCL1_MA1187.1_JASPAR_rc (LCL1:MA1187.1:JASPAR_rc); m=29/56; ncol2=10; w=0; offset=6; strand=R; shift=12; score= 29.8; ------------aAAAATATC
; cor=0.785; Ncor=0.442; logoDP=4.586; NsEucl=0.885; NSW=0.881; rcor=8; rNcor=44; rlogoDP=22; rNsEucl=48; rNSW=27; rank_mean=29.800; match_rank=29
a 0 0 0 0 0 0 0 0 0 0 0 0 273 447 545 560 556 12 560 0 3
c 0 0 0 0 0 0 0 0 0 0 0 0 93 10 0 0 4 0 0 0 558
g 0 0 0 0 0 0 0 0 0 0 0 0 100 25 0 1 1 1 1 0 0
t 0 0 0 0 0 0 0 0 0 0 0 0 95 79 16 0 0 548 0 561 0
|
| IDD7_MA1374.2_JASPAR_shift3 (IDD7:MA1374.2:JASPAR) |
 |
0.732 |
0.447 |
6.031 |
0.890 |
0.866 |
23 |
41 |
6 |
35 |
44 |
29.800 |
30 |
; oligos_7nt_mkv5_m1 versus IDD7_MA1374.2_JASPAR (IDD7:MA1374.2:JASPAR); m=30/56; ncol2=14; w=-3; offset=-3; strand=D; shift=3; score= 29.8; ---rsAAAAcGACAAAA----
; cor=0.732; Ncor=0.447; logoDP=6.031; NsEucl=0.890; NSW=0.866; rcor=23; rNcor=41; rlogoDP=6; rNsEucl=35; rNSW=44; rank_mean=29.800; match_rank=30
a 0 0 0 394 95 400 489 424 528 136 2 575 0 574 576 540 441 0 0 0 0
c 0 0 0 20 224 3 1 49 31 375 0 9 585 0 2 11 25 0 0 0 0
g 0 0 0 153 197 36 0 88 23 57 583 0 0 11 6 29 39 0 0 0 0
t 0 0 0 18 69 146 95 24 3 17 0 1 0 0 1 5 80 0 0 0 0
|
| IDD11_MA2104.1_JASPAR_shift5 (IDD11:MA2104.1:JASPAR) |
 |
0.723 |
0.497 |
5.791 |
0.889 |
0.865 |
29 |
27 |
9 |
37 |
49 |
30.200 |
31 |
; oligos_7nt_mkv5_m1 versus IDD11_MA2104.1_JASPAR (IDD11:MA2104.1:JASPAR); m=31/56; ncol2=12; w=-1; offset=-1; strand=D; shift=5; score= 30.2; -----AAaACGACAAAA----
; cor=0.723; Ncor=0.497; logoDP=5.791; NsEucl=0.889; NSW=0.865; rcor=29; rNcor=27; rlogoDP=9; rNsEucl=37; rNSW=49; rank_mean=30.200; match_rank=31
a 0 0 0 0 0 680 846 641 915 209 7 991 0 1000 959 885 682 0 0 0 0
c 0 0 0 0 0 12 2 70 39 682 0 9 1000 0 12 31 70 0 0 0 0
g 0 0 0 0 0 72 2 142 41 75 990 0 0 0 24 63 77 0 0 0 0
t 0 0 0 0 0 236 150 147 5 34 3 0 0 0 5 21 171 0 0 0 0
|
| IDD1_MA2396.1_JASPAR_rc_shift5 (IDD1:MA2396.1:JASPAR_rc) |
 |
0.746 |
0.513 |
0.686 |
0.892 |
0.872 |
15 |
14 |
51 |
33 |
38 |
30.200 |
32 |
; oligos_7nt_mkv5_m1 versus IDD1_MA2396.1_JASPAR_rc (IDD1:MA2396.1:JASPAR_rc); m=32/56; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score= 30.2; -----aAaAmGACAAAA----
; cor=0.746; Ncor=0.513; logoDP=0.686; NsEucl=0.892; NSW=0.872; rcor=15; rNcor=14; rlogoDP=51; rNsEucl=33; rNSW=38; rank_mean=30.200; match_rank=32
a 0 0 0 0 0 636 820 660 910 250 0 993 0 996 988 944 784 0 0 0 0
c 0 0 0 0 0 31 3 62 45 626 0 5 1000 0 6 13 50 0 0 0 0
g 0 0 0 0 0 92 1 132 40 95 1000 1 0 3 5 33 50 0 0 0 0
t 0 0 0 0 0 238 174 144 3 26 0 0 0 0 0 8 114 0 0 0 0
|
| At5g52660_MA1183.1_JASPAR_rc_shift11 (At5g52660:MA1183.1:JASPAR_rc) |
 |
0.741 |
0.463 |
4.441 |
0.887 |
0.871 |
17 |
34 |
24 |
44 |
39 |
31.600 |
33 |
; oligos_7nt_mkv5_m1 versus At5g52660_MA1183.1_JASPAR_rc (At5g52660:MA1183.1:JASPAR_rc); m=33/56; ncol2=11; w=0; offset=5; strand=R; shift=11; score= 31.6; -----------aaAAAATATC
; cor=0.741; Ncor=0.463; logoDP=4.441; NsEucl=0.887; NSW=0.871; rcor=17; rNcor=34; rlogoDP=24; rNsEucl=44; rNSW=39; rank_mean=31.600; match_rank=33
a 0 0 0 0 0 0 0 0 0 0 0 230 305 427 555 596 594 16 596 0 0
c 0 0 0 0 0 0 0 0 0 0 0 141 92 20 1 0 0 0 0 0 596
g 0 0 0 0 0 0 0 0 0 0 0 91 109 36 0 0 2 1 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 134 90 113 40 0 0 579 0 596 0
|
| IDD2.ampDAP_M0320_AthalianaCistrome_rc_shift2 (IDD2.ampDAP:M0320:AthalianaCistrome_rc) |
 |
0.700 |
0.516 |
0.699 |
0.907 |
0.880 |
54 |
12 |
49 |
15 |
29 |
31.800 |
34 |
; oligos_7nt_mkv5_m1 versus IDD2.ampDAP_M0320_AthalianaCistrome_rc (IDD2.ampDAP:M0320:AthalianaCistrome_rc); m=34/56; ncol2=18; w=-4; offset=-4; strand=R; shift=2; score= 31.8; --masaAaAmGACAAAAwwa-
; cor=0.700; Ncor=0.516; logoDP=0.699; NsEucl=0.907; NSW=0.880; rcor=54; rNcor=12; rlogoDP=49; rNsEucl=15; rNSW=29; rank_mean=31.800; match_rank=34
a 0 0 188 288 142 386 452 339 507 165 11 572 0 578 569 519 407 239 242 208 0
c 0 0 183 84 157 12 5 49 30 345 0 6 578 0 8 13 31 109 95 92 0
g 0 0 71 144 205 61 0 97 36 53 567 0 0 0 0 40 59 78 76 134 0
t 0 0 136 62 74 119 121 93 5 15 0 0 0 0 1 6 81 152 165 144 0
|
| AHL12_AHL12_2_ArabidopsisPBM_rc_shift11 (AHL12:AHL12_2:ArabidopsisPBM_rc) |
 |
0.704 |
0.469 |
2.411 |
0.896 |
0.891 |
43 |
32 |
38 |
26 |
20 |
31.800 |
35 |
; oligos_7nt_mkv5_m1 versus AHL12_AHL12_2_ArabidopsisPBM_rc (AHL12:AHL12_2:ArabidopsisPBM_rc); m=35/56; ncol2=10; w=0; offset=5; strand=R; shift=11; score= 31.8; -----------AwwAWWTwwy
; cor=0.704; Ncor=0.469; logoDP=2.411; NsEucl=0.896; NSW=0.891; rcor=43; rNcor=32; rlogoDP=38; rNsEucl=26; rNSW=20; rank_mean=31.800; match_rank=35
a 0 0 0 0 0 0 0 0 0 0 0 74 56 37 79 74 25 20 59 40 15
c 0 0 0 0 0 0 0 0 0 0 0 3 2 2 0 0 1 1 2 3 42
g 0 0 0 0 0 0 0 0 0 0 0 18 2 2 1 1 0 0 2 2 9
t 0 0 0 0 0 0 0 0 0 0 0 5 40 59 20 25 74 79 37 55 34
|
| AHL25_AHL25_2_ArabidopsisPBM_shift12 (AHL25:AHL25_2:ArabidopsisPBM) |
 |
0.725 |
0.408 |
2.371 |
0.895 |
0.900 |
28 |
54 |
39 |
30 |
8 |
31.800 |
36 |
; oligos_7nt_mkv5_m1 versus AHL25_AHL25_2_ArabidopsisPBM (AHL25:AHL25_2:ArabidopsisPBM); m=36/56; ncol2=10; w=0; offset=6; strand=D; shift=12; score= 31.8; ------------aAwwWWwwT
; cor=0.725; Ncor=0.408; logoDP=2.371; NsEucl=0.895; NSW=0.900; rcor=28; rNcor=54; rlogoDP=39; rNsEucl=30; rNSW=8; rank_mean=31.800; match_rank=36
a 0 0 0 0 0 0 0 0 0 0 0 0 50 86 65 35 70 30 64 34 4
c 0 0 0 0 0 0 0 0 0 0 0 0 14 4 0 0 1 0 1 1 6
g 0 0 0 0 0 0 0 0 0 0 0 0 13 6 1 1 0 0 0 1 4
t 0 0 0 0 0 0 0 0 0 0 0 0 23 4 34 64 29 70 35 64 86
|
| ATGRP2B_M0583_1.02_CISBP_rc_shift8 (ATGRP2B:M0583_1.02:CISBP_rc) |
 |
0.818 |
0.436 |
0.887 |
0.886 |
0.896 |
4 |
49 |
45 |
46 |
17 |
32.200 |
37 |
; oligos_7nt_mkv5_m1 versus ATGRP2B_M0583_1.02_CISBP_rc (ATGRP2B:M0583_1.02:CISBP_rc); m=37/56; ncol2=8; w=0; offset=2; strand=R; shift=8; score= 32.2; --------AAwAAAAm-----
; cor=0.818; Ncor=0.436; logoDP=0.887; NsEucl=0.886; NSW=0.896; rcor=4; rNcor=49; rlogoDP=45; rNsEucl=46; rNSW=17; rank_mean=32.200; match_rank=37
a 0 0 0 0 0 0 0 0 99 99 34 99 99 100 99 66 0 0 0 0 0
c 0 0 0 0 0 0 0 0 1 1 0 1 1 0 1 33 0 0 0 0 0
g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 66 0 0 0 0 1 0 0 0 0 0
|
| DOF1.7_MA1277.2_JASPAR_shift11 (DOF1.7:MA1277.2:JASPAR) |
 |
0.718 |
0.449 |
4.248 |
0.891 |
0.881 |
33 |
40 |
29 |
34 |
25 |
32.200 |
38 |
; oligos_7nt_mkv5_m1 versus DOF1.7_MA1277.2_JASPAR (DOF1.7:MA1277.2:JASPAR); m=38/56; ncol2=11; w=0; offset=5; strand=D; shift=11; score= 32.2; -----------aAAAAGtara
; cor=0.718; Ncor=0.449; logoDP=4.248; NsEucl=0.891; NSW=0.881; rcor=33; rNcor=40; rlogoDP=29; rNsEucl=34; rNSW=25; rank_mean=32.200; match_rank=38
a 0 0 0 0 0 0 0 0 0 0 0 388 466 595 595 575 0 96 371 342 381
c 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 113 18 26 52
g 0 0 0 0 0 0 0 0 0 0 0 108 3 0 0 20 595 94 90 177 83
t 0 0 0 0 0 0 0 0 0 0 0 51 126 0 0 0 0 292 116 50 79
|
| AT1G47655.ampDAP_M0271_AthalianaCistrome_rc_shift3 (AT1G47655.ampDAP:M0271:AthalianaCistrome_rc) |
 |
0.713 |
0.476 |
0.403 |
0.904 |
0.889 |
35 |
30 |
56 |
20 |
21 |
32.400 |
39 |
; oligos_7nt_mkv5_m1 versus AT1G47655.ampDAP_M0271_AthalianaCistrome_rc (AT1G47655.ampDAP:M0271:AthalianaCistrome_rc); m=39/56; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score= 32.4; ---araaAAAGaaAAarr---
; cor=0.713; Ncor=0.476; logoDP=0.403; NsEucl=0.904; NSW=0.889; rcor=35; rNcor=30; rlogoDP=56; rNsEucl=20; rNSW=21; rank_mean=32.400; match_rank=39
a 0 0 0 264 197 352 353 516 559 529 15 210 348 424 443 379 288 271 0 0 0
c 0 0 0 72 138 82 61 0 0 0 5 134 79 12 30 41 0 62 0 0 0
g 0 0 0 119 183 108 63 51 12 42 551 97 66 120 47 109 208 188 0 0 0
t 0 0 0 116 53 29 94 4 0 0 0 130 78 15 51 42 75 50 0 0 0
|
| DOF4.7_MA2380.1_JASPAR_rc_shift11 (DOF4.7:MA2380.1:JASPAR_rc) |
 |
0.750 |
0.450 |
2.028 |
0.885 |
0.881 |
13 |
39 |
41 |
47 |
26 |
33.200 |
40 |
; oligos_7nt_mkv5_m1 versus DOF4.7_MA2380.1_JASPAR_rc (DOF4.7:MA2380.1:JASPAR_rc); m=40/56; ncol2=9; w=0; offset=5; strand=R; shift=11; score= 33.2; -----------AWAAAGTwa-
; cor=0.750; Ncor=0.450; logoDP=2.028; NsEucl=0.885; NSW=0.881; rcor=13; rNcor=39; rlogoDP=41; rNsEucl=47; rNSW=26; rank_mean=33.200; match_rank=40
a 0 0 0 0 0 0 0 0 0 0 0 874 706 1000 1000 1000 0 33 385 577 0
c 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 76 58 58 0
g 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 1000 183 123 242 0
t 0 0 0 0 0 0 0 0 0 0 0 46 293 0 0 0 0 706 432 121 0
|
| IDD2_MA1373.1_JASPAR_shift2 (IDD2:MA1373.1:JASPAR) |
 |
0.734 |
0.425 |
6.234 |
0.888 |
0.863 |
21 |
51 |
2 |
40 |
52 |
33.200 |
41 |
; oligos_7nt_mkv5_m1 versus IDD2_MA1373.1_JASPAR (IDD2:MA1373.1:JASPAR); m=41/56; ncol2=15; w=-4; offset=-4; strand=D; shift=2; score= 33.2; --hRswAAAMGACAAAA----
; cor=0.734; Ncor=0.425; logoDP=6.234; NsEucl=0.888; NSW=0.863; rcor=21; rNcor=51; rlogoDP=2; rNsEucl=40; rNSW=52; rank_mean=33.200; match_rank=41
a 0 0 28 64 8 57 87 68 91 24 2 94 5 93 83 91 75 0 0 0 0
c 0 0 37 4 34 1 0 6 2 67 0 0 89 0 11 0 7 0 0 0 0
g 0 0 2 25 33 2 0 17 1 3 92 0 0 1 0 3 0 0 0 0 0
t 0 0 27 1 19 34 7 3 0 0 0 0 0 0 0 0 12 0 0 0 0
|
| At4g01280_MA1190.1_JASPAR_rc_shift11 (At4g01280:MA1190.1:JASPAR_rc) |
 |
0.736 |
0.460 |
4.328 |
0.886 |
0.870 |
20 |
35 |
27 |
45 |
40 |
33.400 |
42 |
; oligos_7nt_mkv5_m1 versus At4g01280_MA1190.1_JASPAR_rc (At4g01280:MA1190.1:JASPAR_rc); m=42/56; ncol2=11; w=0; offset=5; strand=R; shift=11; score= 33.4; -----------waAAAATATC
; cor=0.736; Ncor=0.460; logoDP=4.328; NsEucl=0.886; NSW=0.870; rcor=20; rNcor=35; rlogoDP=27; rNsEucl=45; rNSW=40; rank_mean=33.400; match_rank=42
a 0 0 0 0 0 0 0 0 0 0 0 221 311 424 572 598 598 48 599 0 0
c 0 0 0 0 0 0 0 0 0 0 0 120 83 26 0 0 0 0 0 0 599
g 0 0 0 0 0 0 0 0 0 0 0 105 107 33 0 0 1 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 153 98 116 27 1 0 551 0 599 0
|
| LCL1.ampDAP_M0611_AthalianaCistrome_rc_shift11 (LCL1.ampDAP:M0611:AthalianaCistrome_rc) |
 |
0.733 |
0.458 |
4.861 |
0.884 |
0.866 |
22 |
36 |
17 |
49 |
43 |
33.400 |
43 |
; oligos_7nt_mkv5_m1 versus LCL1.ampDAP_M0611_AthalianaCistrome_rc (LCL1.ampDAP:M0611:AthalianaCistrome_rc); m=43/56; ncol2=11; w=0; offset=5; strand=R; shift=11; score= 33.4; -----------aaAAAATATC
; cor=0.733; Ncor=0.458; logoDP=4.861; NsEucl=0.884; NSW=0.866; rcor=22; rNcor=36; rlogoDP=17; rNsEucl=49; rNSW=43; rank_mean=33.400; match_rank=43
a 0 0 0 0 0 0 0 0 0 0 0 216 272 406 569 587 587 0 587 0 0
c 0 0 0 0 0 0 0 0 0 0 0 141 97 15 0 0 0 0 0 0 587
g 0 0 0 0 0 0 0 0 0 0 0 84 111 39 1 0 0 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 146 107 127 17 0 0 587 0 587 0
|
| EPR1.ampDAP_M0582_AthalianaCistrome_shift11 (EPR1.ampDAP:M0582:AthalianaCistrome) |
 |
0.726 |
0.453 |
5.079 |
0.884 |
0.864 |
26 |
37 |
16 |
50 |
50 |
35.800 |
44 |
; oligos_7nt_mkv5_m1 versus EPR1.ampDAP_M0582_AthalianaCistrome (EPR1.ampDAP:M0582:AthalianaCistrome); m=44/56; ncol2=11; w=0; offset=5; strand=D; shift=11; score= 35.8; -----------aawAAATATC
; cor=0.726; Ncor=0.453; logoDP=5.079; NsEucl=0.884; NSW=0.864; rcor=26; rNcor=37; rlogoDP=16; rNsEucl=50; rNSW=50; rank_mean=35.800; match_rank=44
a 0 0 0 0 0 0 0 0 0 0 0 237 268 368 574 598 597 2 598 0 0
c 0 0 0 0 0 0 0 0 0 0 0 119 86 24 0 0 1 0 0 0 598
g 0 0 0 0 0 0 0 0 0 0 0 101 119 39 3 0 0 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 141 125 167 21 0 0 596 0 598 0
|
| RVE4_MA1187.2_JASPAR_rc_shift13 (RVE4:MA1187.2:JASPAR_rc) |
 |
0.808 |
0.404 |
2.195 |
0.877 |
0.879 |
6 |
56 |
40 |
55 |
31 |
37.600 |
45 |
; oligos_7nt_mkv5_m1 versus RVE4_MA1187.2_JASPAR_rc (RVE4:MA1187.2:JASPAR_rc); m=45/56; ncol2=9; w=0; offset=7; strand=R; shift=13; score= 37.6; -------------AAAATATC
; cor=0.808; Ncor=0.404; logoDP=2.195; NsEucl=0.877; NSW=0.879; rcor=6; rNcor=56; rlogoDP=40; rNsEucl=55; rNSW=31; rank_mean=37.600; match_rank=45
a 0 0 0 0 0 0 0 0 0 0 0 0 0 447 545 560 556 12 560 0 3
c 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 4 0 0 0 558
g 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 1 1 1 1 0 0
t 0 0 0 0 0 0 0 0 0 0 0 0 0 79 16 0 0 548 0 561 0
|
| NUC_MA1157.2_JASPAR_rc_shift5 (NUC:MA1157.2:JASPAR_rc) |
 |
0.726 |
0.499 |
0.671 |
0.889 |
0.865 |
25 |
26 |
53 |
36 |
48 |
37.600 |
46 |
; oligos_7nt_mkv5_m1 versus NUC_MA1157.2_JASPAR_rc (NUC:MA1157.2:JASPAR_rc); m=46/56; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score= 37.6; -----wAaAcGACAAAA----
; cor=0.726; Ncor=0.499; logoDP=0.671; NsEucl=0.889; NSW=0.865; rcor=25; rNcor=26; rlogoDP=53; rNsEucl=36; rNSW=48; rank_mean=37.600; match_rank=46
a 0 0 0 0 0 366 493 372 515 120 0 565 0 562 557 510 411 0 0 0 0
c 0 0 0 0 0 15 3 46 33 381 0 5 570 0 8 19 42 0 0 0 0
g 0 0 0 0 0 41 0 89 19 51 570 0 0 8 5 33 47 0 0 0 0
t 0 0 0 0 0 148 74 63 3 18 0 0 0 0 0 8 70 0 0 0 0
|
| ENY_UN0398.1_JASPAR_rc_shift2 (ENY:UN0398.1:JASPAR_rc) |
 |
0.701 |
0.480 |
0.800 |
0.898 |
0.866 |
50 |
28 |
46 |
22 |
45 |
38.200 |
47 |
; oligos_7nt_mkv5_m1 versus ENY_UN0398.1_JASPAR_rc (ENY:UN0398.1:JASPAR_rc); m=47/56; ncol2=17; w=-4; offset=-4; strand=R; shift=2; score= 38.2; --mavaAaAmGACAAAAww--
; cor=0.701; Ncor=0.480; logoDP=0.800; NsEucl=0.898; NSW=0.866; rcor=50; rNcor=28; rlogoDP=46; rNsEucl=22; rNSW=45; rank_mean=38.200; match_rank=47
a 0 0 289 538 264 637 820 661 911 250.42 0 993 0 997 988 945 785 434 464 0 0
c 0 0 353 129 304 31.933 3.361 62.185 45.378 627 0 5.042 1000 0 6.723 13.445 50.42 168 129 0 0
g 0 0 109 239 324.37 92.437 1.681 133 40.336 95.798 1000 1.681 0 3.361 5.042 33.613 50.42 139 113 0 0
t 0 0 249 94.118 108 239 174.79 145 3.361 26.891 0 0 0 0 0 8.403 114 259 294 0 0
|
| AT2G28920.DAP_M0714_AthalianaCistrome_shift12 (AT2G28920.DAP:M0714:AthalianaCistrome) |
 |
0.737 |
0.414 |
4.781 |
0.877 |
0.864 |
18 |
52 |
18 |
54 |
51 |
38.600 |
48 |
; oligos_7nt_mkv5_m1 versus AT2G28920.DAP_M0714_AthalianaCistrome (AT2G28920.DAP:M0714:AthalianaCistrome); m=48/56; ncol2=10; w=0; offset=6; strand=D; shift=12; score= 38.6; ------------awAAATATC
; cor=0.737; Ncor=0.414; logoDP=4.781; NsEucl=0.877; NSW=0.864; rcor=18; rNcor=52; rlogoDP=18; rNsEucl=54; rNSW=51; rank_mean=38.600; match_rank=48
a 0 0 0 0 0 0 0 0 0 0 0 0 224 320 545 580 580 1 584 0 0
c 0 0 0 0 0 0 0 0 0 0 0 0 119 45 0 0 0 0 0 0 584
g 0 0 0 0 0 0 0 0 0 0 0 0 125 49 11 0 4 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 0 116 170 28 4 0 583 0 584 0
|
| At5g66730.ampDAP_M0310_AthalianaCistrome_rc_shift2 (At5g66730.ampDAP:M0310:AthalianaCistrome_rc) |
 |
0.701 |
0.480 |
0.800 |
0.898 |
0.866 |
51 |
29 |
47 |
23 |
46 |
39.200 |
49 |
; oligos_7nt_mkv5_m1 versus At5g66730.ampDAP_M0310_AthalianaCistrome_rc (At5g66730.ampDAP:M0310:AthalianaCistrome_rc); m=49/56; ncol2=17; w=-4; offset=-4; strand=R; shift=2; score= 39.2; --mavaAaAmGACAAAAww--
; cor=0.701; Ncor=0.480; logoDP=0.800; NsEucl=0.898; NSW=0.866; rcor=51; rNcor=29; rlogoDP=47; rNsEucl=23; rNSW=46; rank_mean=39.200; match_rank=49
a 0 0 172 320 157 379 488 393 542 149 0 591 0 593 588 562 467 258 276 0 0
c 0 0 210 77 181 19 2 37 27 373 0 3 595 0 4 8 30 100 77 0 0
g 0 0 65 142 193 55 1 79 24 57 595 1 0 2 3 20 30 83 67 0 0
t 0 0 148 56 64 142 104 86 2 16 0 0 0 0 0 5 68 154 175 0 0
|
| LHY1_MA1185.1_JASPAR_rc_shift12 (LHY1:MA1185.1:JASPAR_rc) |
 |
0.736 |
0.414 |
4.354 |
0.877 |
0.865 |
19 |
53 |
26 |
53 |
47 |
39.600 |
50 |
; oligos_7nt_mkv5_m1 versus LHY1_MA1185.1_JASPAR_rc (LHY1:MA1185.1:JASPAR_rc); m=50/56; ncol2=10; w=0; offset=6; strand=R; shift=12; score= 39.6; ------------awAAATATC
; cor=0.736; Ncor=0.414; logoDP=4.354; NsEucl=0.877; NSW=0.865; rcor=19; rNcor=53; rlogoDP=26; rNsEucl=53; rNSW=47; rank_mean=39.600; match_rank=50
a 0 0 0 0 0 0 0 0 0 0 0 0 225 347 542 593 586 0 599 0 0
c 0 0 0 0 0 0 0 0 0 0 0 0 117 34 0 3 5 0 0 0 599
g 0 0 0 0 0 0 0 0 0 0 0 0 144 46 6 0 8 2 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 0 113 172 51 3 0 597 0 599 0
|
| ANAC057_UN0346.1_JASPAR_shift5 (ANAC057:UN0346.1:JASPAR) |
 |
0.703 |
0.440 |
4.035 |
0.888 |
0.875 |
45 |
46 |
32 |
41 |
36 |
40.000 |
51 |
; oligos_7nt_mkv5_m1 versus ANAC057_UN0346.1_JASPAR (ANAC057:UN0346.1:JASPAR); m=51/56; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score= 40; -----haCAAGAAAym-----
; cor=0.703; Ncor=0.440; logoDP=4.035; NsEucl=0.888; NSW=0.875; rcor=45; rNcor=46; rlogoDP=32; rNsEucl=41; rNSW=36; rank_mean=40.000; match_rank=51
a 0 0 0 0 0 781 1038 0 2674 2614 0 2048 2515 2679 538 700 0 0 0 0 0
c 0 0 0 0 0 692 495 2727 6 105 2 96 36 14 993 946 0 0 0 0 0
g 0 0 0 0 0 453 656 0 22 7 2711 43 15 9 450 478 0 0 0 0 0
t 0 0 0 0 0 826 563 25 50 26 39 565 186 50 771 628 0 0 0 0 0
|
| ID1_ID1_Athamap_rc_shift5 (ID1:ID1:Athamap_rc) |
 |
0.707 |
0.442 |
0.689 |
0.889 |
0.876 |
39 |
43 |
50 |
39 |
34 |
41.000 |
|
; oligos_7nt_mkv5_m1 versus ID1_ID1_Athamap_rc (ID1:ID1:Athamap_rc); m=52/56; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score= 41; -----AwwrsGACAAA-----
; cor=0.707; Ncor=0.442; logoDP=0.689; NsEucl=0.889; NSW=0.876; rcor=39; rNcor=43; rlogoDP=50; rNsEucl=39; rNSW=34; rank_mean=41.000; match_rank=
a 0 0 0 0 0 11 9 9 9 2 1 14 1 14 15 12 0 0 0 0 0
c 0 0 0 0 0 0 0 0 0 8 0 1 14 0 0 0 0 0 0 0 0
g 0 0 0 0 0 1 1 2 6 5 14 0 0 1 0 3 0 0 0 0 0
t 0 0 0 0 0 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0
|
| XP_013599228.1_C2H2_2_AT2G02080_EEAD0669_EEADannot_shift2 (XP_013599228.1_C2H2_2_AT2G02080:EEAD0669:EEADannot) |
 |
0.704 |
0.407 |
6.948 |
0.877 |
0.833 |
44 |
55 |
1 |
56 |
56 |
42.400 |
|
; oligos_7nt_mkv5_m1 versus XP_013599228.1_C2H2_2_AT2G02080_EEAD0669_EEADannot (XP_013599228.1_C2H2_2_AT2G02080:EEAD0669:EEADannot); m=53/56; ncol2=15; w=-4; offset=-4; strand=D; shift=2; score= 42.4; --mAsAAAACGACAAAA----
; cor=0.704; Ncor=0.407; logoDP=6.948; NsEucl=0.877; NSW=0.833; rcor=44; rNcor=55; rlogoDP=1; rNsEucl=56; rNSW=56; rank_mean=42.400; match_rank=
a 0 0 30 79 6 79 90 84 100 9 0 100 0 100 100 98 83 0 0 0 0
c 0 0 55 2 50 0 0 7 0 84 0 0 100 0 0 0 3 0 0 0 0
g 0 0 2 19 39 0 0 9 0 6 100 0 0 0 0 2 0 0 0 0 0
t 0 0 13 0 5 21 10 0 0 1 0 0 0 0 0 0 14 0 0 0 0
|
| IDD5_MA1370.2_JASPAR_rc_shift3 (IDD5:MA1370.2:JASPAR_rc) |
 |
0.721 |
0.441 |
0.888 |
0.887 |
0.861 |
30 |
45 |
44 |
42 |
53 |
42.800 |
|
; oligos_7nt_mkv5_m1 versus IDD5_MA1370.2_JASPAR_rc (IDD5:MA1370.2:JASPAR_rc); m=54/56; ncol2=14; w=-3; offset=-3; strand=R; shift=3; score= 42.8; ---rswAAACGACAAAA----
; cor=0.721; Ncor=0.441; logoDP=0.888; NsEucl=0.887; NSW=0.861; rcor=30; rNcor=45; rlogoDP=44; rNsEucl=42; rNSW=53; rank_mean=42.800; match_rank=
a 0 0 0 107 15 101 131 122 146 32 0 159 1 157 151 148 119 0 0 0 0
c 0 0 0 3 75 0 8 10 8 111 0 0 159 0 7 4 8 0 0 0 0
g 0 0 0 44 57 6 4 25 5 14 160 1 0 3 2 7 4 0 0 0 0
t 0 0 0 6 13 53 17 3 1 3 0 0 0 0 0 1 29 0 0 0 0
|
| At4g01280.ampDAP_M0593_AthalianaCistrome_rc_shift11 (At4g01280.ampDAP:M0593:AthalianaCistrome_rc) |
 |
0.702 |
0.439 |
4.030 |
0.882 |
0.860 |
49 |
47 |
33 |
51 |
54 |
46.800 |
|
; oligos_7nt_mkv5_m1 versus At4g01280.ampDAP_M0593_AthalianaCistrome_rc (At4g01280.ampDAP:M0593:AthalianaCistrome_rc); m=55/56; ncol2=11; w=0; offset=5; strand=R; shift=11; score= 46.8; -----------aaaAAATATC
; cor=0.702; Ncor=0.439; logoDP=4.030; NsEucl=0.882; NSW=0.860; rcor=49; rNcor=47; rlogoDP=33; rNsEucl=51; rNSW=54; rank_mean=46.800; match_rank=
a 0 0 0 0 0 0 0 0 0 0 0 204 248 374 517 591 596 49 597 0 0
c 0 0 0 0 0 0 0 0 0 0 0 131 118 46 8 0 0 0 0 0 597
g 0 0 0 0 0 0 0 0 0 0 0 113 126 49 15 4 1 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 149 105 128 57 2 0 548 0 597 0
|
| At3g09600.ampDAP_M0586_AthalianaCistrome_rc_shift11 (At3g09600.ampDAP:M0586:AthalianaCistrome_rc) |
 |
0.700 |
0.438 |
4.302 |
0.880 |
0.856 |
56 |
48 |
28 |
52 |
55 |
47.800 |
|
; oligos_7nt_mkv5_m1 versus At3g09600.ampDAP_M0586_AthalianaCistrome_rc (At3g09600.ampDAP:M0586:AthalianaCistrome_rc); m=56/56; ncol2=11; w=0; offset=5; strand=R; shift=11; score= 47.8; -----------waaAAATATC
; cor=0.700; Ncor=0.438; logoDP=4.302; NsEucl=0.880; NSW=0.856; rcor=56; rNcor=48; rlogoDP=28; rNsEucl=52; rNSW=55; rank_mean=47.800; match_rank=
a 0 0 0 0 0 0 0 0 0 0 0 185 236 381 535 598 596 15 598 0 0
c 0 0 0 0 0 0 0 0 0 0 0 132 109 40 0 0 0 0 0 0 598
g 0 0 0 0 0 0 0 0 0 0 0 121 121 30 7 0 1 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 160 132 147 56 0 1 583 0 598 0
|