; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/30/dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/03/30/dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/03/30/dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2026/03/30/dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2026/03/30/dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 1940 2324 4516 5297 4780 439 218 200 370 5656 4407 1067 2462 2278
c 1181 1082 414 218 45 262 5321 5649 5323 216 308 426 801 914
g 816 779 372 212 1119 5147 290 62 91 83 200 278 774 1069
t 2152 1904 787 362 145 241 260 178 305 134 1174 4318 2052 1828
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m1_rc.png
;
a 2829 2751 2367 558 159 74 69 99 7506 3364 2644
c 1253 1251 2957 75 44 5733 7684 7670 83 819 1136
g 1070 825 521 7189 7649 1995 27 39 114 792 954
t 2773 3098 2080 103 73 123 145 117 222 2950 3191
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m2_rc.png
;
a 446 538 1323 1306 6 8 0 21 4 12 192 626 578
c 267 152 27 23 17 1 1 4 1448 1385 77 144 156
g 158 101 45 35 1 1463 1471 1446 3 6 681 257 260
t 606 686 82 113 1453 5 5 6 22 74 527 450 483
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m3_rc.png
;
a 5285 5053 2367 804 438 304 206 276 10231 5738 4892
c 1981 1564 833 102 85 6672 13223 12770 521 1597 1794
g 1794 1597 521 12770 13223 6672 85 102 833 1564 1981
t 4892 5738 10231 276 206 304 438 804 2367 5053 5285
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m4_rc.png
;
a 3093 4606 6308 392 150 124 206 8146 1782 2482 3354
c 1340 1154 52 70 7845 8059 7990 28 447 1132 1054
g 1124 1005 1905 7786 160 29 49 133 289 1066 1043
t 2851 1643 143 160 253 196 163 101 5890 3728 2957
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m5_rc.png
;
a 1912 2109 4288 1108 154 39 28 55 5223 3993 1831 2294
c 851 784 302 18 29 5167 5239 5076 29 170 778 669
g 579 642 249 4113 5082 31 8 44 35 150 498 605
t 1976 1783 479 79 53 81 43 143 31 1005 2211 1750
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m6_rc.png
;
a 1770 1794 966 3517 888 282 165 95 215 4849 4002 3532 1988 1826
c 791 740 340 331 36 91 4593 4791 4427 84 188 333 746 851
g 741 550 286 662 4008 4589 172 34 111 52 100 195 612 838
t 1774 1992 3484 566 144 114 146 156 323 91 786 1016 1730 1561
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m7_rc.png
;
a 1762 1863 3987 976 86 37 20 37 4731 955 1451 2032
c 756 700 314 19 17 4739 4810 4723 14 170 605 511
g 493 597 177 3827 4761 29 6 17 92 150 520 561
t 1872 1723 405 61 19 78 47 106 46 3608 2307 1779
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m8_rc.png
;
a 1681 1896 3363 4081 1256 184 96 63 235 4797 1068 729 2183 1998
c 846 807 377 290 43 185 4700 4869 4579 31 240 280 511 635
g 667 557 312 175 3614 4600 107 16 44 106 179 233 592 906
t 1849 1783 991 497 130 74 140 95 185 109 3556 3801 1757 1504
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m9_rc.png
;
a 1890 2188 4577 4520 0 4546 4773 4759 4588 602 1800 2010
c 964 941 150 222 4428 236 81 112 121 3517 1020 850
g 801 759 137 97 297 76 59 78 107 285 680 812
t 1390 1157 181 206 320 187 132 96 229 641 1545 1373
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m10_rc.png
;
a 855 901 915 2456 75 8 11 3 10 2532 953 788 1120
c 432 362 325 37 2 2 2518 2534 2515 1 436 326 272
g 346 246 264 17 2460 2526 5 1 2 4 150 232 275
t 911 1035 1040 34 7 8 10 6 17 7 1005 1198 877
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m11_rc.png
;
a 5113 6090 13184 13020 2046 1930 13381 13809 13505 5567 4719
c 2993 2553 401 603 10748 11244 643 226 323 2703 3091
g 2394 2470 464 283 631 449 250 244 265 2001 2166
t 4139 3526 590 733 1214 1016 365 360 546 4368 4663
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m12_rc.png
;
a 1007 1026 385 1829 2194 132 2267 2223 145 2282 2119 860 1086
c 333 333 119 129 49 46 25 45 63 40 63 282 406
g 433 410 1624 229 64 2140 42 37 2110 30 71 752 390
t 594 598 239 180 60 49 33 62 49 15 114 473 485
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m13_rc.png
;
a 2950 2985 5239 546 356 715 6934 6583 603 2571 2548
c 1224 799 137 6019 6472 6073 70 137 244 1147 1171
g 984 2028 1597 206 88 158 74 75 132 955 1261
t 2026 1372 211 413 268 238 106 389 6205 2511 2204
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m14_rc.png
;
a 927 869 1003 175 48 13 14 20 2764 302 840 1202 1083
c 490 503 1233 13 5 2739 2783 2772 2 87 346 259 372
g 314 289 177 2603 2748 17 4 3 33 55 305 322 495
t 1083 1153 401 23 13 45 13 19 15 2370 1323 1031 864
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m15_rc.png
;
a 2359 2526 6214 398 277 241 260 791 375 330 1917 2070
c 1324 1252 285 154 144 99 146 631 170 224 1069 1191
g 1114 1358 393 195 174 119 278 6072 312 255 1337 1396
t 2697 2358 602 6747 6899 7035 6810 0 6637 6685 3171 2837
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m16_rc.png
;
a 986 946 117 1738 69 25 32 27 47 2374 1089 870
c 344 288 46 21 10 15 2508 2474 774 43 257 380
g 380 257 43 774 2474 2508 15 10 21 46 288 344
t 870 1089 2374 47 27 32 25 69 1738 117 946 986
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m17_rc.png
;
a 468 691 0 1486 0 1486 0 1486 490 608
c 243 179 0 0 0 0 0 0 236 223
g 410 281 1486 0 1486 0 1486 0 435 311
t 365 335 0 0 0 0 0 0 325 344
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m18_rc.png
;
a 1389 1632 3366 3856 3566 340 138 133 260 4110 3366 1067 1777 1620
c 888 842 290 120 40 141 3902 4038 3849 85 201 1803 706 786
g 590 545 227 135 633 3702 109 19 63 55 131 278 493 703
t 1459 1307 443 215 87 143 177 136 154 76 628 1178 1350 1217
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m19_rc.png
;
a 5995 6407 14223 1179 15077 15105 14989 14600 1422 5292 5826
c 2470 2571 413 1460 423 293 294 492 665 2546 2349
g 2767 2999 600 11939 368 460 547 401 672 3327 3057
t 5138 4393 1134 1792 502 512 540 877 13611 5205 5138
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30//dyad-analysis_2026-03-30.180953_73Y3CZ_pssm_count_matrices_logo_m20_rc.png
;
; Host name rsat
; Job started 2026-03-30.181030
; Job done 2026-03-30.181042
; Seconds 1.97
; user 1.97
; system 0.44
; cuser 8.83
; csystem 1.03