; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.142119_2026-03-30.142119_XX18DY/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvkauto_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.142119_2026-03-30.142119_XX18DY/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvkauto_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.142119_2026-03-30.142119_XX18DY/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvkauto_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.142119_2026-03-30.142119_XX18DY/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvkauto_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	13	12	20	0	3	24	0	0	8	10
c	3	1	3	0	1	2	0	1	3	6
g	5	6	1	26	1	0	26	25	4	2
t	5	7	2	0	21	0	0	0	11	8
//
; Sites	26
>site_0
AAAGTAGGAA
>site_1
TATGTAGGTA
>site_2
AGAGAAGGTA
>site_3
TTAGTAGGCC
>site_4
GATGTAGGTA
>site_5
AGAGAAGGTA
>site_6
GAAGTAGGAA
>site_7
AGAGTAGGTT
>site_8
CGGGTAGGAG
>site_9
AGAGCAGGCC
>site_10
CAAGTAGGTG
>site_11
TCCGTAGGGT
>site_12
ATAGTAGGTA
>site_13
ATAGTAGCGC
>site_14
ATAGGAGGAC
>site_15
ATAGTCGGGA
>site_16
AAAGTAGGTT
>site_17
AACGTAGGAT
>site_18
AAAGTAGGTT
>site_19
TAAGTAGGTT
>site_20
CGAGTAGGGC
>site_21
GAAGTAGGAA
>site_22
GTAGTCGGCT
>site_23
AAAGTAGGAA
>site_24
TTAGAAGGAT
>site_25
GACGTAGGTC
; Host name	rsat
; Job started	2026-03-30.145332
; Job done	2026-03-30.145332
; Seconds	0.11
;	user	0.11
;	system	0
;	cuser	0
;	csystem	0
