; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.142119_2026-03-30.142119_XX18DY/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.142119_2026-03-30.142119_XX18DY/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.142119_2026-03-30.142119_XX18DY/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.142119_2026-03-30.142119_XX18DY/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.142119_2026-03-30.142119_XX18DY/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	11	12	0	0	0	11	21	47	47	47	20	10
c	4	9	47	0	0	7	2	0	0	0	10	7
g	10	9	0	0	0	8	10	0	0	0	5	9
t	22	17	0	47	47	21	14	0	0	0	12	21
//
; Sites	47
>site_0
GGCTTTAAAAAC
>site_1
ATCTTAAAAACT
>site_2
TTCTTAAAAAAG
>site_3
TTCTTGAAAAGA
>site_4
TGCTTTTAAATT
>site_5
TTCTTAAAAAAT
>site_6
CGCTTTTAAACG
>site_7
GACTTTGAAATA
>site_8
TGCTTGAAAACT
>site_9
GGCTTATAAAAT
>site_10
TTCTTCAAAACG
>site_11
GGCTTTAAAAGT
>site_12
TCCTTTAAAACA
>site_13
ATCTTGTAAAAT
>site_14
GACTTTAAAAGC
>site_15
TGCTTTTAAAGT
>site_16
CTCTTAAAAATT
>site_17
TTCTTAAAAAAC
>site_18
AGCTTAGAAAAA
>site_19
GCCTTCAAAACC
>site_20
ACCTTATAAAGT
>site_21
TCCTTCGAAATA
>site_22
TCCTTTTAAAAG
>site_23
CACTTTTAAAAG
>site_24
TTCTTTAAAAAT
>site_25
GCCTTTGAAACT
>site_26
CTCTTTGAAAAC
>site_27
TACTTATAAAAC
>site_28
AACTTGTAAATT
>site_29
TTCTTCTAAAAG
>site_30
ATCTTACAAATT
>site_31
TTCTTTAAAATG
>site_32
AACTTGAAAATC
>site_33
AACTTTTAAATG
>site_34
TCCTTTGAAAAT
>site_35
GGCTTGAAAATA
>site_36
GTCTTCAAAAAA
>site_37
GACTTTTAAATT
>site_38
AACTTACAAATG
>site_39
TACTTTGAAAAT
>site_40
TCCTTGGAAAAA
>site_41
TTCTTCGAAAAA
>site_42
TACTTGGAAACA
>site_43
TTCTTTAAAACT
>site_44
ATCTTTAAAACT
>site_45
TCCTTCTAAAAT
>site_46
AACTTTAAAAAT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.142119_2026-03-30.142119_XX18DY/results/dyads_test_vs_ctrl//peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.142119_2026-03-30.142119_XX18DY/results/dyads_test_vs_ctrl//peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices_logo_m1_rc.png
;
; Host name	rsat
; Job started	2026-03-30.145338
; Job done	2026-03-30.145338
; Seconds	0.15
;	user	0.15
;	system	0
;	cuser	0.21
;	csystem	0.03
