RSAT - peak-motifs result

Analysis: _CYP82C4_Atted2_up2 (30/03/2026 15:30)

peak-motifs  -v 1 -title _CYP82C4_Atted2_up2 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.151159_2026-03-30.151159_kZhxzc/peak-motifspeak_seq -ctrl $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.151159_2026-03-30.151159_kZhxzc/peak-motifscontrol_seq -markov auto -disco oligos,dyads -nmotifs 10 -minol 6 -maxol 8 -merge_lengths -2str -origin end -offset -200 -motif_db footprintDB tf $RSAT/public_html/motif_databases/footprintDB/footprintDB.motif.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.151159_2026-03-30.151159_kZhxzc

motif discovery
oligos_6-8nt	oligos_6-8nt_m1 assembly: ttcatgcc (sig=3.79; e-value=0.00016) RC: ggcatgaa oligos_6-8nt_m2 assembly: atgtatataatatacat (sig=2.23; e-value=0.0059) RC: atgtatattatatacat oligos_6-8nt_m3 assembly: aagtcaac (sig=1.11; e-value=0.078) RC: gttgactt oligos_6-8nt_m4 assembly: gcattatattat (sig=1.84; e-value=0.014) RC: ataatataatgc oligos_6-8nt_m5 assembly: atgtatataatatattatat (sig=2.23; e-value=0.0059) RC: atataatatattatatacat oligos_6-8nt_m6 assembly: ccatgcc (sig=3.79; e-value=0.00016) RC: ggcatgg oligos_6-8nt_m7 assembly: catatacat (sig=2.23; e-value=0.0059) RC: atgtatatg oligos_6-8nt_m8 assembly: gtcaacga (sig=0.40; e-value=0.4) RC: tcgttgac oligos_6-8nt_m9 : (sig=; e-value=1) RC: oligos_6-8nt_m10 : (sig=; e-value=1) RC:	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
dyads_test_vs_ctrl	dyads_test_vs_ctrl_m1 assembly: tcatgcc (sig=3.04; e-value=0.00091) RC: ggcatga dyads_test_vs_ctrl_m2 assembly: atgnnnnntgc (sig=3.04; e-value=0.00091) RC: gcannnnncat dyads_test_vs_ctrl_m3 assembly: catantatg (sig=1.83; e-value=0.015) RC: catantatg dyads_test_vs_ctrl_m4 assembly: atannnnata (sig=1.83; e-value=0.015) RC: tatnnnntat dyads_test_vs_ctrl_m5 assembly: atannnnnnnnnnnnnntta (sig=3.04; e-value=0.00091) RC: taannnnnnnnnnnnnntat dyads_test_vs_ctrl_m6 assembly: atannnnnnnnnnnnnnnntag (sig=3.04; e-value=0.00091) RC: ctannnnnnnnnnnnnnnntat dyads_test_vs_ctrl_m7 assembly: aaannnnnnnnnnnnacg (sig=3.04; e-value=0.00091) RC: cgtnnnnnnnnnnnnttt dyads_test_vs_ctrl_m8 assembly: gtcnnnnnnnnnnnnnnnnnata (sig=3.04; e-value=0.00091) RC: tatnnnnnnnnnnnnnnnnngac dyads_test_vs_ctrl_m9 assembly: agtnnnnnnnnnnnnnntaa (sig=3.04; e-value=0.00091) RC: ttannnnnnnnnnnnnnact dyads_test_vs_ctrl_m10 assembly: tatnnnnnnnnnnnnnnnnata (sig=3.04; e-value=0.00091) RC: tatnnnnnnnnnnnnnnnnata	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]

Motif discovery
Motif 1   oligos_6-8nt_m1	k-mer sig=3.79; evalue=0.00016 SsttCATGCCky RMGGCATGAASS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor SsttCATGCCky M03D4.4:M0460_1.02:CISBP M03D4.4/M0460_1.02/CISBP R 11 0.9167 0.829 0.760 NA NA hbx7:M0876_1.02:CISBP hbx7/M0876_1.02/CISBP D 12 0.9231 0.711 0.656 NA NA GLYMA-08G357600:MA1810.1:JASPAR GLYMA-08G357600/MA1810.1/JASPAR R 12 0.8571 0.711 0.609 NA NA Total matches= 57 (54 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 21 (41.18%) Max nb of predicted sites per peak: 2  (IRT1) Mean nb of predicted sites per peak: 1.29	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 2   oligos_6-8nt_m2	k-mer sig=2.23; evalue=0.0059 kratRTatataatatACawst ASWTGTATATTATATAYATYM	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor kratRTatataatatACawst FOXC1_L130F_R1:UP00589D_1:UniPROBE FOXC1_L130F_R1/UP00589D_1/UniPROBE D 21 0.9545 0.722 0.689 NA NA HMGB15:UN0400.1:JASPAR HMGB15/UN0400.1/JASPAR R 16 0.7619 0.759 0.578 NA NA AT1G04880.DAP:M0148:AthalianaCistrome AT1G04880.DAP/M0148/AthalianaCistrome R 16 0.7619 0.759 0.578 NA NA Total matches= 21 (18 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 8 (15.69%) Max nb of predicted sites per peak: 3  (AT1G51840) Mean nb of predicted sites per peak: 1.75	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 3   oligos_6-8nt_m3	k-mer sig=1.11; evalue=0.078 myAaGtCaAsrs SYSTTGACTTRK	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor myAaGtCaAsrs WRKY15.ampDAP:M0813:AthalianaCistrome WRKY15.ampDAP/M0813/AthalianaCistrome R 12 1.0000 0.905 0.905 NA NA WRKY65.ampDAP:M0802:AthalianaCistrome WRKY65.ampDAP/M0802/AthalianaCistrome R 12 1.0000 0.889 0.889 NA NA WRKY28:MA1311.1:JASPAR WRKY28/MA1311.1/JASPAR R 12 0.9231 0.940 0.868 NA NA Total matches= 336 (333 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 21 (41.18%) Max nb of predicted sites per peak: 3  (GLP4) Mean nb of predicted sites per peak: 1.29	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 4   oligos_6-8nt_m4	k-mer sig=1.84; evalue=0.014 abGSatTaTatTAtwk MWATAATATAATSCVT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor abGSatTaTatTAtwk AT1G04880.ampDAP:M0144:AthalianaCistrome AT1G04880.ampDAP/M0144/AthalianaCistrome D 15 0.9375 0.702 0.658 NA NA ATHB22:M0844_1.02:CISBP ATHB22/M0844_1.02/CISBP R 13 0.8125 0.807 0.656 NA NA HMGB15:UN0400.1:JASPAR HMGB15/UN0400.1/JASPAR R 15 0.8824 0.718 0.633 NA NA Total matches= 26 (23 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 14 (27.45%) Max nb of predicted sites per peak: 2  (IRT1) Mean nb of predicted sites per peak: 1.29	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 5   oligos_6-8nt_m5	k-mer sig=2.23; evalue=0.0059 wkatGtAtatratAtAtTataTtm KAATATAATATATYATATACATMW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wkatGtAtatratAtAtTataTtm KLF1_R328H_R1:UP00599D_1:UniPROBE KLF1_R328H_R1/UP00599D_1/UniPROBE D 21 0.8400 0.712 0.598 NA NA AT1G04880.DAP:M0148:AthalianaCistrome AT1G04880.DAP/M0148/AthalianaCistrome R 16 0.6667 0.780 0.520 NA NA HMGB15:UN0400.1:JASPAR HMGB15/UN0400.1/JASPAR R 16 0.6667 0.780 0.520 NA NA Total matches= 6 (3 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 14 (27.45%) Max nb of predicted sites per peak: 4  (AT1G51840) Mean nb of predicted sites per peak: 1.71	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 6   oligos_6-8nt_m6	k-mer sig=3.79; evalue=0.00016 ssCCATGCCgy RCGGCATGGSS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ssCCATGCCgy M03D4.4:M0460_1.02:CISBP M03D4.4/M0460_1.02/CISBP R 11 1.0000 0.739 0.739 NA NA AtLEC2:AtLEC2:Athamap AtLEC2/AtLEC2/Athamap D 10 0.9091 0.777 0.706 NA NA LEC2:MA0581.1:JASPAR LEC2/MA0581.1/JASPAR D 10 0.8333 0.827 0.689 NA NA Total matches= 67 (64 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 23 (45.10%) Max nb of predicted sites per peak: 3  (AtMYB10) Mean nb of predicted sites per peak: 1.35	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 7   oligos_6-8nt_m7	k-mer sig=2.23; evalue=0.0059 tdCATATACatkm KMATGTATATGHA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tdCATATACatkm PROTEIN:1au7_AB:3D-footprint PROTEIN/1au7_AB/3D-footprint R 13 0.9286 0.828 0.769 NA NA PROTEIN:1au7_A:3D-footprint PROTEIN/1au7_A/3D-footprint D 11 0.8462 0.810 0.685 NA NA PIT1_HUMAN.H10MO.C|M01434:PIT1_HUMAN.H10MO.C|M01434:HOCOMOCO PIT1_HUMAN.H10MO.C|M01434/PIT1_HUMAN.H10MO.C|M01434/HOCOMOCO R 12 0.8571 0.777 0.666 NA NA Total matches= 100 (97 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 26 (50.98%) Max nb of predicted sites per peak: 3  (STOP2) Mean nb of predicted sites per peak: 1.31	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 8   oligos_6-8nt_m8	k-mer sig=0.40; evalue=0.4 kkGTCAACGArm KYTCGTTGACMM	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor kkGTCAACGArm WRKY1:UP00582A_1:UniPROBE WRKY1/UP00582A_1/UniPROBE R 12 0.9231 0.858 0.792 NA NA 0700010421:M1703_1.02:CISBP 0700010421/M1703_1.02/CISBP D 12 0.9231 0.846 0.781 NA NA VOZ2:UP00581A_2:UniPROBE VOZ2/UP00581A_2/UniPROBE D 12 0.9231 0.843 0.778 NA NA Total matches= 356 (353 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 19 (37.25%) Max nb of predicted sites per peak: 2  (BZIP8) Mean nb of predicted sites per peak: 1.05	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 9   dyads_test_vs_ctrl_m1	k-mer sig=3.04; evalue=0.00091 bytCATGCCky RMGGCATGARV	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor bytCATGCCky M03D4.4:M0460_1.02:CISBP M03D4.4/M0460_1.02/CISBP R 11 1.0000 0.840 0.840 NA NA AtLEC2:AtLEC2:Athamap AtLEC2/AtLEC2/Athamap D 10 0.9091 0.724 0.658 NA NA hbx7:M0876_1.02:CISBP hbx7/M0876_1.02/CISBP D 11 0.8462 0.750 0.635 NA NA Total matches= 72 (69 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 12 (23.53%) Max nb of predicted sites per peak: 2  (IRT1) Mean nb of predicted sites per peak: 1.17	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 10   dyads_test_vs_ctrl_m2	k-mer sig=3.04; evalue=0.00091 ksaTGSMwbrtGCck MGGCAYVWKSCATSM	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ksaTGSMwbrtGCck E(spl)m5-HLH:UN0761.1:JASPAR E(spl)m5-HLH/UN0761.1/JASPAR R 11 0.7333 0.755 0.554 NA NA HLHm5:M5020_1.02:CISBP HLHm5/M5020_1.02/CISBP D 10 0.6667 0.776 0.517 NA NA E(spl)m8-HLH:UN0763.1:JASPAR E(spl)m8-HLH/UN0763.1/JASPAR R 10 0.6667 0.757 0.505 NA NA Total matches= 29 (26 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 14 (27.45%) Max nb of predicted sites per peak: 3  (NAS1) Mean nb of predicted sites per peak: 1.57	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 11   dyads_test_vs_ctrl_m3	k-mer sig=1.83; evalue=0.015 wmCATawtATGkw WMCATAWTATGKW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wmCATawtATGkw ATHB22:M0844_1.02:CISBP ATHB22/M0844_1.02/CISBP D 12 0.8571 0.720 0.617 NA NA CG11924:Cf2-PA_SOLEXA_FBgn0000286:FlyZincFinger CG11924/Cf2-PA_SOLEXA_FBgn0000286/FlyZincFinger R 10 0.7692 0.747 0.575 NA NA ZNF486:UN0815.1:JASPAR ZNF486/UN0815.1/JASPAR D 10 0.7143 0.732 0.523 NA NA Total matches= 28 (25 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 9 (17.65%) Max nb of predicted sites per peak: 2  (STOP2) Mean nb of predicted sites per peak: 1.89	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 12   dyads_test_vs_ctrl_m4	k-mer sig=1.83; evalue=0.015 vyaTakwmTAtayt ARTATAKWMTATRB	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor vyaTakwmTAtayt AT1G04880.ampDAP:M0144:AthalianaCistrome AT1G04880.ampDAP/M0144/AthalianaCistrome R 13 0.8125 0.850 0.690 NA NA AT1G04880.DAP:M0148:AthalianaCistrome AT1G04880.DAP/M0148/AthalianaCistrome D 13 0.7647 0.835 0.639 NA NA HMGB15:UN0400.1:JASPAR HMGB15/UN0400.1/JASPAR D 13 0.7647 0.835 0.639 NA NA Total matches= 74 (71 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 12 (23.53%) Max nb of predicted sites per peak: 2  (UGT75B2) Mean nb of predicted sites per peak: 1.33	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 13   dyads_test_vs_ctrl_m5	k-mer sig=3.04; evalue=0.00091 wyaTAsrydbsatSmtwkkttakk MMTAAMMWAKSATSVHRYSTATRW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wyaTAsrydbsatSmtwkkttakk HAT1.DAP:M0444:AthalianaCistrome HAT1.DAP/M0444/AthalianaCistrome D 15 0.6250 0.701 0.438 NA NA REV:MA2344.1:JASPAR REV/MA2344.1/JASPAR D 14 0.5833 0.708 0.413 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 17 (33.33%) Max nb of predicted sites per peak: 2  (MPK13) Mean nb of predicted sites per peak: 1.18	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 14   dyads_test_vs_ctrl_m6	k-mer sig=3.04; evalue=0.00091 atATAGvyrbSatSmtwkkamtaGgs SCCTAKTMMWAKSATSVYRBCTATAT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor atATAGvyrbSatSmtwkkamtaGgs Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 12 (23.53%) Max nb of predicted sites per peak: 2  (FRO3) Mean nb of predicted sites per peak: 1.33	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 15   dyads_test_vs_ctrl_m7	k-mer sig=3.04; evalue=0.00091 rgaraSsCGssRtshtGaCGwv BWCGTCADSAYSSCGSSTYTCY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rgaraSsCGssRtshtGaCGwv cnc:UN0754.1:JASPAR cnc/UN0754.1/JASPAR D 13 0.5909 0.717 0.424 NA NA CREB1:MA0018.1:JASPAR CREB1/MA0018.1/JASPAR D 12 0.5455 0.769 0.419 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 13 (25.49%) Max nb of predicted sites per peak: 2  (BZIP8) Mean nb of predicted sites per peak: 1.08	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 16   dyads_test_vs_ctrl_m8	k-mer sig=3.04; evalue=0.00091 ksrtCrgSmsStrmGytkaddtatakg CMTATAHHTMARCKYASSKSCYGAYSM	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ksrtCrgSmsStrmGytkaddtatakg Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 12 (23.53%) Max nb of predicted sites per peak: 2  (ORG3) Mean nb of predicted sites per peak: 1.08	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 17   dyads_test_vs_ctrl_m9	k-mer sig=3.04; evalue=0.00091 braGtSGsGystgyRymkrtaavm KBTTAYMKRYRCASRCSCSACTYV	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor braGtSGsGystgyRymkrtaavm Zfp128:PB0198.1:JASPAR Zfp128/PB0198.1/JASPAR D 14 0.5833 0.716 0.418 NA NA Zfp128:UP00094A_2:UniPROBE Zfp128/UP00094A_2/UniPROBE D 14 0.5833 0.716 0.417 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 17 (33.33%) Max nb of predicted sites per peak: 2  (SLAH1) Mean nb of predicted sites per peak: 1.12	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 18   dyads_test_vs_ctrl_m10	k-mer sig=3.04; evalue=0.00091 attatSrysyswrCatataCtataag CTTATAGTATATGYWSRSRYSATAAT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
footprintDB name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor attatSrysyswrCatataCtataag AT1G04880.ampDAP:M0144:AthalianaCistrome AT1G04880.ampDAP/M0144/AthalianaCistrome D 15 0.5769 0.731 0.422 NA NA ZNF211:MA1974.1:JASPAR ZNF211/MA1974.1/JASPAR D 15 0.5769 0.708 0.409 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 12 (23.53%) Max nb of predicted sites per peak: 3  (ORG3) Mean nb of predicted sites per peak: 1.17	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]

Command:  peak-motifs  -v 1 -title _CYP82C4_Atted2_up2 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.151159_2026-03-30.151159_kZhxzc/peak-motifspeak_seq -ctrl $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.151159_2026-03-30.151159_kZhxzc/peak-motifscontrol_seq -markov auto -disco oligos,dyads -nmotifs 10 -minol 6 -maxol 8 -merge_lengths -2str -origin end -offset -200 -motif_db footprintDB tf $RSAT/public_html/motif_databases/footprintDB/footprintDB.motif.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.151159_2026-03-30.151159_kZhxzc

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557

Warning: Skipped invalid row e1ab63050c1bae3cf9573dd9c528557