; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	4	8	24	2	2	0	29	0	0	0	2	13	12
c	8	6	0	0	1	0	0	0	28	30	3	2	7
g	11	12	5	0	0	0	0	30	2	0	4	12	6
t	7	4	1	28	27	30	1	0	0	0	21	3	5
//
; Sites	30
>site_0
TTAATTAGCCTTC
>site_1
CTATTTAGGCTAA
>site_2
ATATTTAGCCTAA
>site_3
GCATTTAGCCCAG
>site_4
TGGTTTAGCCTAA
>site_5
CCATTTAGCCCGG
>site_6
CGATTTAGCCTGT
>site_7
GAATATAGCCTAC
>site_8
CGATTTAGCCAAA
>site_9
TGATCTAGCCTGA
>site_10
TAGTTTAGCCTCG
>site_11
CGGTTTAGCCTAA
>site_12
CAATTTAGCCTAT
>site_13
CGATTTAGCCAGA
>site_14
TGATTTAGCCGGC
>site_15
GGGTTTAGCCTGA
>site_16
AGATTTAGCCTGT
>site_17
GCATTTAGCCGGC
>site_18
TAATTTAGCCGGG
>site_19
TCATTTAGCCTCC
>site_20
GCATTTTGCCTAA
>site_21
GAATATAGCCTAC
>site_22
AAATTTAGCCCGG
>site_23
GCAATTAGCCTAA
>site_24
AGATTTAGCCGAT
>site_25
GAGTTTAGCCTGA
>site_26
CGATTTAGGCTGA
>site_27
GGTTTTAGCCTAG
>site_28
GTATTTAGCCTTT
>site_29
GAATTTAGCCTTC
a	5	6	1	0	18	0	0	1	0	0	1	13	1
c	5	2	2	16	0	1	1	0	0	17	16	0	6
g	8	4	2	2	0	17	17	17	0	0	1	1	6
t	0	6	13	0	0	0	0	0	18	1	0	4	5
//
; Sites	18
>site_0
CATCAGGGTCCAC
>site_1
CATCAGGGTCCAG
>site_2
AATCAGGGTCCAT
>site_3
GTCCAGGGTCCAC
>site_4
GTCCAGGGTCCAG
>site_5
GCTCAGGGTCCAG
>site_6
GATGAGGGTCCAA
>site_7
GGTCAGGATCCAT
>site_8
CGGCAGCGTCCAC
>site_9
CATCAGGGTCCAG
>site_10
CATCAGGGTCCAC
>site_11
ATTCAGGGTCCTT
>site_12
GTTCAGGGTCCTG
>site_13
ACGGAGGGTCCGT
>site_14
ATTCAGGGTCCTT
>site_15
GTACAGGGTTCAC
>site_16
GGTCAGGGTCATG
>site_17
AGTCACGGTCGAC
a	19	16	51	50	50	47	51	53	7	51	20	10
c	8	11	2	1	0	6	0	1	1	0	10	19
g	15	20	2	4	5	1	3	1	48	1	13	13
t	14	9	1	1	1	2	2	1	0	4	13	14
//
; Sites	56
>site_0
GTAAAAAAGGCT
>site_1
TAAAAAAAGAAC
>site_2
GCAAATAAGAAT
>site_3
TGCAAAAAGAAT
>site_4
AGAAAATAGAAA
>site_5
GAAAAAAAAACC
>site_6
GGAAAAAAAAAC
>site_7
GCAAAGAAGACC
>site_8
AGAAAAAAGAAA
>site_9
GAAAGAAAGAGT
>site_10
TCAAAATAGAAG
>site_11
TAAAAAAAGACG
>site_12
AGAGAAAAGATG
>site_13
TGAAACAAGATC
>site_14
CCAAAAAAGTAT
>site_15
ATAAAAAAGACC
>site_16
ACAAAAAAAAAA
>site_17
CAAAAAAAAAAC
>site_18
AAAAAAAAAACT
>site_19
AGAAAAGAGAGC
>site_20
CAAGAAAAGAGA
>site_21
GGAAAAGAGATC
>site_22
AGAAAAAAAATT
>site_23
AAAATAAAGACG
>site_24
AAAAGAAAGAAT
>site_25
AAAGAAAAGAAA
>site_26
GGAGAAAAGAGG
>site_27
AGAAACAAGACC
>site_28
TAAAACAAGATA
>site_29
TGAAAAAAGAGC
>site_30
TGAAACAAGAAT
>site_31
TTGAAAAAGAAA
>site_32
TGAAAAATGAGC
>site_33
GGAAACAAGAAA
>site_34
GAAAAAAAGTAT
>site_35
TCATAAAAGAGC
>site_36
CCAAAAAAGTAT
>site_37
TGAAACAAGATC
>site_38
GTCAAAAAGAGC
>site_39
ACAAAAGAGATC
>site_40
AAACAAAAGAGA
>site_41
GCAAAAAGGAAG
>site_42
ATAAAAACGATG
>site_43
GCAAGAAAGAGG
>site_44
TAAAAAAAGATT
>site_45
GGAAAAAAGATC
>site_46
ATAAGAAAGAAT
>site_47
CTAAGAAAGAGC
>site_48
CAAAATAAGATG
>site_49
CTTAAAAAGATC
>site_50
AAAAAAAAGTCG
>site_51
TCAAAAAAAAGT
>site_52
AGAAAAAAGAAG
>site_53
GGAAAAAAGACA
>site_54
CTAAAAAACAGG
>site_55
AGGAAAAAGATG
a	12	6	33	4	5	2	32	0	1	31	14	10
c	9	8	1	31	0	0	0	2	1	1	5	7
g	8	3	1	0	29	32	1	32	2	2	11	5
t	6	18	0	0	1	1	2	1	31	1	5	13
//
; Sites	35
>site_0
CAAAGGAGTACC
>site_1
TCACGGAGCAGC
>site_2
CTACGGAGTACG
>site_3
CTACGGAGAAAG
>site_4
ATACGAAGTAGA
>site_5
ATACGGAGTATT
>site_6
ACAAGGAGTAGC
>site_7
ATACAGAGTACA
>site_8
CTACAGAGTAAG
>site_9
GTCCGGAGTAGA
>site_10
ACACGGTGTAGT
>site_11
GAACGGAGTAAT
>site_12
TAACGGAGTGAA
>site_13
ACACGGAGTGGA
>site_14
GCAAGGAGTAAG
>site_15
CTACGGAGTAAC
>site_16
GTACAGAGTAGA
>site_17
GGACGGATTAAT
>site_18
GTACAGAGTACT
>site_19
TGGCGGAGTAAT
>site_20
AAACGGAGGATG
>site_21
TTACTGAGTATC
>site_22
AAACGTAGTAAT
>site_23
TTAAGGAGTAAC
>site_24
GTACAGAGTAAT
>site_25
CAACGGAGTTAC
>site_26
ACACGGTGTAGT
>site_27
CTACGGAGTACA
>site_28
CCACGGAGTCGA
>site_29
ATACGGACTATT
>site_30
ATACGAAGTAAT
>site_31
GCACGGACTAGT
>site_32
TTACGGAGTATA
>site_33
AGACGGAGGAGA
>site_34
CTACGGGGTAAT
a	10	9	1	2	27	1	3	1	25	0	9	11
c	5	4	25	2	0	26	1	0	0	1	4	7
g	8	6	0	1	0	0	22	24	1	24	2	4
t	4	8	1	22	0	0	1	2	1	2	12	5
//
; Sites	27
>site_0
TTCTACGGAGTA
>site_1
ACCTACGGACTT
>site_2
GCCTACGGAGAA
>site_3
CAATACGGAGTA
>site_4
GTCTACAGAGGT
>site_5
ATCTACAGAGTA
>site_6
GACAACGGAGAG
>site_7
CCCTACGGTGAT
>site_8
TGCTACGAAGTG
>site_9
AACTACGGAGTA
>site_10
CTCGACGGAGCC
>site_11
AGCCACGGAGAT
>site_12
CTCTACTGAGCC
>site_13
TTCTACGTAGCC
>site_14
GGCTACGTAGAA
>site_15
ACCTACCGAGCC
>site_16
GACTACAGAGAA
>site_17
ATCAACGGAGTT
>site_18
AACTACGGATTC
>site_19
AACTACGGAGTA
>site_20
TGCCACGGAGTC
>site_21
CACTACGGAGAG
>site_22
ATCTACGGATAA
>site_23
GGCTACGGAGGG
>site_24
GGTTACGGAGTA
>site_25
GACTACGGGGTA
>site_26
AACTAAGGAGAC
; Host name	rsat
; Job started	2026-03-30.161129
; Job done	2026-03-30.161129
; Seconds	0.14
;	user	0.14
;	system	0.02
;	cuser	0
;	csystem	0
