; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	14	9	32	1	1	2	3	55	51	48	3	22	13	13
c	14	25	12	2	4	51	0	0	2	1	8	15	18	19
g	12	6	6	55	53	2	1	3	2	4	3	8	15	10
t	18	18	8	0	0	3	54	0	3	5	44	13	12	16
//
; Sites	58
>site_0
CGAAGCTGAATACT
>site_1
ACTGGCTAATTCGG
>site_2
GAAGGCTAATTAAT
>site_3
TTAGCCTAAATAGT
>site_4
TTAGGCTAAATATA
>site_5
CTGGGCTAAATGCA
>site_6
TTAGGCTAAACCAA
>site_7
CCGGGCTAAATGGA
>site_8
ACAGGCTAAATCGT
>site_9
GAAGGCTGAAGACC
>site_10
TGCGGCTAAAGTGA
>site_11
CAGGGCTAAGTATT
>site_12
GTAGGCTATATTCT
>site_13
TCAGGCTAATCAGG
>site_14
TTTGGCTAAATCGA
>site_15
AGACGGTAAATACC
>site_16
TCTGGCTGAATACC
>site_17
CCACGCAAAATACC
>site_18
CCCGGCTAAAGTTC
>site_19
TCAGGCTAGATCAC
>site_20
CGAGGCTAAACTAC
>site_21
CAAGGCAAATTAAC
>site_22
TTAGGCTAAACCGC
>site_23
GTCGGTTAAATTTT
>site_24
ATAGGCTAAATTGC
>site_25
CCAGGCTAGCTAGG
>site_26
TCTGGCTAAATCGA
>site_27
ATAGCCTAAACAAA
>site_28
ACCGGGTAAATGTG
>site_29
GCCGGCTAAATCAT
>site_30
TCAGGCTAAACCCC
>site_31
ATGGGCTATATAGG
>site_32
ACAGGCTAAATCTG
>site_33
GCAGCTTAAATACC
>site_34
GCCGGCTAAATGCA
>site_35
CCCGGCTAAATTAA
>site_36
GGAGGCTAAATGAA
>site_37
TTAGGCAAAATGCC
>site_38
GCTGGCTAAAAGAC
>site_39
GTAGGCTATATTCT
>site_40
CAGGGCTAAGTATT
>site_41
AATGACTAAATATG
>site_42
GTCGGATAAATATG
>site_43
CCGGGCTAAATTTG
>site_44
TTAGGCTAATTGCA
>site_45
ATCGGCTAAATCTC
>site_46
TACGGATAAATTGT
>site_47
TCCGGCTAAACATT
>site_48
ACTGGCTACATCGC
>site_49
TCAGGCTAAACTCT
>site_50
CGCGGTTAAATCAT
>site_51
TCTGGCTAAGTTAC
>site_52
ACAGGCTAAGAAAG
>site_53
ATAGGCGACATACT
>site_54
TCAGCCTAAATCGC
>site_55
CTAGGCTAAAACCC
>site_56
AAAGGCTAAATACT
>site_57
GAAGGCTAAATTCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	4	11	42	0	0	0	0	0	6	16
c	10	18	0	2	0	0	0	42	17	7
g	13	10	0	40	42	42	0	0	7	7
t	15	3	0	0	0	0	42	0	12	12
//
; Sites	42
>site_0
CCAGGGTCGA
>site_1
TAAGGGTCAA
>site_2
GGAGGGTCTA
>site_3
CAAGGGTCCA
>site_4
GGAGGGTCGA
>site_5
TCAGGGTCCA
>site_6
TCAGGGTCCA
>site_7
GCACGGTCGT
>site_8
TCAGGGTCCA
>site_9
GAAGGGTCTG
>site_10
CCAGGGTCCA
>site_11
CCAGGGTCCA
>site_12
TCAGGGTCCA
>site_13
TGAGGGTCCA
>site_14
GGAGGGTCGG
>site_15
CTAGGGTCTC
>site_16
GGAGGGTCTT
>site_17
AAAGGGTCCC
>site_18
AGAGGGTCTT
>site_19
AAAGGGTCCT
>site_20
ATAGGGTCTC
>site_21
TTAGGGTCTT
>site_22
CAAGGGTCGG
>site_23
GCACGGTCGT
>site_24
TCAGGGTCCA
>site_25
TCAGGGTCCA
>site_26
TCAGGGTCCT
>site_27
CCAGGGTCTG
>site_28
CGAGGGTCAA
>site_29
TGAGGGTCAC
>site_30
GAAGGGTCGT
>site_31
TCAGGGTCCT
>site_32
GGAGGGTCCG
>site_33
TCAGGGTCCT
>site_34
CAAGGGTCTT
>site_35
CAAGGGTCAC
>site_36
TCAGGGTCAT
>site_37
GCAGGGTCAG
>site_38
GAAGGGTCTA
>site_39
GCAGGGTCTC
>site_40
GAAGGGTCCC
>site_41
TGAGGGTCTG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	16	10	54	0	3	2	47	0	12	22
c	15	13	0	54	1	1	3	1	9	9
g	11	9	0	0	50	44	1	52	8	12
t	12	22	0	0	0	7	3	1	25	11
//
; Sites	54
>site_0
GTACGCAGTT
>site_1
TCACGGAGCA
>site_2
CTACGGAGTA
>site_3
CTACGGAGAA
>site_4
ATACGAAGTA
>site_5
ATACGGAGTA
>site_6
AAACGGAGCT
>site_7
ACACGGTGTA
>site_8
TGACGGAGCC
>site_9
GAACGGAGTA
>site_10
TTACGTAGGT
>site_11
TAACGGAGTG
>site_12
TTACGGCGTG
>site_13
CAACGGAGAG
>site_14
ACACGGAGTG
>site_15
TCACGGAGAT
>site_16
CTACGGAGTA
>site_17
GTACAGAGTA
>site_18
CGACGGAGCC
>site_19
CCACGGAGAT
>site_20
ACACGGCGAA
>site_21
CTACGTAGAA
>site_22
CTACGTAGCC
>site_23
GTACAGAGTA
>site_24
TCACGTAGTG
>site_25
AAACGGAGGA
>site_26
ACACGGAGGG
>site_27
TGACGTAGTC
>site_28
AAACGTAGTA
>site_29
GCACGGAGAG
>site_30
GTACAGAGTA
>site_31
CAACGGAGTT
>site_32
ACACGGTGTA
>site_33
CTACGGAGTA
>site_34
TGACGGCGAC
>site_35
CCACGGAGTC
>site_36
AGACGGAGAG
>site_37
CTACGGAGAG
>site_38
CGACCGAGCG
>site_39
GCACGGAGCT
>site_40
ATACGGACTA
>site_41
ATACGAAGTA
>site_42
CTACGGAGGG
>site_43
TTACGTAGGT
>site_44
TAACGGTGTC
>site_45
GAACGGAGCT
>site_46
AAACGGAGGC
>site_47
TTACGGAGTA
>site_48
GGACGGAGCT
>site_49
GCACGGAGGT
>site_50
AGACGGAGGA
>site_51
CTACGGGGTA
>site_52
GTACGGATAG
>site_53
AGACGGAGAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	6	10	0	0	0	0	0	0	7	5
c	9	11	35	35	35	35	0	35	12	12
g	5	6	0	0	0	0	0	0	6	7
t	15	8	0	0	0	0	35	0	10	11
//
; Sites	35
>site_0
ACCCCCTCAT
>site_1
CTCCCCTCAT
>site_2
TTCCCCTCCT
>site_3
TACCCCTCAG
>site_4
AACCCCTCAC
>site_5
CCCCCCTCCC
>site_6
GACCCCTCGA
>site_7
CACCCCTCTC
>site_8
CACCCCTCCA
>site_9
GACCCCTCTG
>site_10
CCCCCCTCCC
>site_11
GCCCCCTCTC
>site_12
CACCCCTCTT
>site_13
TGCCCCTCGC
>site_14
ATCCCCTCTT
>site_15
CGCCCCTCTC
>site_16
CCCCCCTCTC
>site_17
GCCCCCTCGC
>site_18
TTCCCCTCTT
>site_19
TACCCCTCGG
>site_20
TACCCCTCCA
>site_21
AGCCCCTCAG
>site_22
TGCCCCTCCT
>site_23
TGCCCCTCCC
>site_24
TACCCCTCAG
>site_25
TGCCCCTCTC
>site_26
GCCCCCTCGA
>site_27
TCCCCCTCCG
>site_28
ATCCCCTCGT
>site_29
CTCCCCTCAA
>site_30
ATCCCCTCTG
>site_31
TTCCCCTCCT
>site_32
TCCCCCTCCT
>site_33
TCCCCCTCCC
>site_34
TCCCCCTCCT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	10	7	0	0	1	0	48	0	16	18
c	10	16	48	0	0	47	0	0	9	10
g	10	9	0	0	47	0	0	48	16	10
t	18	16	0	48	0	1	0	0	7	10
//
; Sites	48
>site_0
CCCTGCAGGT
>site_1
ACCTGCAGGG
>site_2
ATCTGCAGCT
>site_3
AGCTGCAGAT
>site_4
TTCTGCAGAA
>site_5
TTCTGCAGAA
>site_6
CTCTGCAGGG
>site_7
CCCTGCAGAG
>site_8
ATCTGCAGTC
>site_9
GACTGCAGAT
>site_10
GCCTGCAGGA
>site_11
TCCTGCAGGC
>site_12
GTCTGCAGAA
>site_13
TTCTGCAGAC
>site_14
TCCTGCAGAA
>site_15
TTCTGCAGGA
>site_16
CCCTGCAGCA
>site_17
TGCTGCAGGG
>site_18
CCCTGCAGAT
>site_19
ATCTGCAGGG
>site_20
CCCTGCAGTG
>site_21
CACTGCAGGG
>site_22
GTCTGCAGCC
>site_23
GGCTGCAGAC
>site_24
CCCTGCAGCC
>site_25
GGCTGCAGGG
>site_26
TGCTGCAGCT
>site_27
AGCTGCAGCA
>site_28
TACTACAGTA
>site_29
TACTGTAGTA
>site_30
TGCTGCAGGG
>site_31
CCCTGCAGCA
>site_32
TTCTGCAGGA
>site_33
TCCTGCAGAA
>site_34
TACTGCAGAC
>site_35
GTCTGCAGTA
>site_36
AACTGCAGAC
>site_37
GTCTGCAGTT
>site_38
TGCTGCAGTC
>site_39
GACTGCAGCA
>site_40
ACCTGCAGGT
>site_41
ACCTGCAGGT
>site_42
ACCTGCAGCA
>site_43
TGCTGCAGGT
>site_44
TCCTGCAGAA
>site_45
TTCTGCAGGA
>site_46
CTCTGCAGAC
>site_47
GTCTGCAGAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.161110_2026-03-30.161110_KXazJq/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-03-30.161119
; Job done	2026-03-30.161121
; Seconds	0.17
;	user	0.17
;	system	0.06
;	cuser	1.24
;	csystem	0.25
