RSAT - peak-motifs result

Analysis: aniger (30/03/2026 16:39)

peak-motifs  -v 1 -title aniger -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND/peak-motifspeak_seq -ctrl $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND/peak-motifscontrol_seq -max_seq_len 10 -markov auto -disco oligos,dyads,positions -nmotifs 2 -minol 6 -maxol 6 -no_merge_lengths -2str -origin center -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND

Command:  peak-motifs  -v 1 -title aniger -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND/peak-motifspeak_seq -ctrl $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND/peak-motifscontrol_seq -max_seq_len 10 -markov auto -disco oligos,dyads,positions -nmotifs 2 -minol 6 -maxol 6 -no_merge_lengths -2str -origin center -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND

Warning: Not a single pattern was found in file tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl.tab

Warning: Matrix file $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_sig_sites.ft does not contain any matrix in feature format. Please check format.

Warning: Input file contained not a single matrix

Warning: Matrix file is empty (file size is zero) $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf

Warning: Input file contained not a single matrix

Warning: Matrix file is empty (file size is zero) $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf

Warning: Input file contained not a single matrix

Warning: Matrix file is empty (file size is zero) $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND/results/discovered_motifs/peak-motifs_motifs_discovered.tf

Warning: Matrix file is empty (file size is zero) $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.163837_2026-03-30.163837_8afeND/results/discovered_motifs/peak-motifs_motifs_discovered.tf

Warning: Not a single discovered motif. Reducing the order of the Markov model may increase sensitivity.