/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title Pensub -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	40
	Sum of sequence lengths      	36297
	Min sequence length          	0
	Max sequence length          	1000
	Average sequence length      	907
	Possible positions           	36257
 Sequences:
	#	length	ID
	1	1000	Pensub
	2	1000	Pensub
	3	706	Pensub
	4	1000	Pensub
	5	967	Pensub
	6	1000	Pensub
	7	1000	Pensub
	8	1000	Pensub
	9	647	Pensub
	10	1000	Pensub
	11	1000	Pensub
	12	888	Pensub
	13	1000	Pensub
	14	1000	Pensub
	15	1000	Pensub
	16	1000	Pensub
	17	1000	Pensub
	18	1000	Pensub
	19	467	Pensub
	20	1000	Pensub
	21	1000	Pensub
	22	1000	Pensub
	23	254	Pensub
	24	544	Pensub
	25	955	Pensub
	26	1000	Pensub
	27	762	Pensub
	28	1000	Pensub
	29	1000	Pensub
	30	1000	Pensub
	31	872	Pensub
	32	1000	Pensub
	33	604	Pensub
	34	1000	Pensub
	35	1000	Pensub
	36	1000	Pensub
	37	1000	Pensub
	38	1000	Pensub
	39	881	Pensub
	40	750	Pensub
 Oligonucleotide statistics:
	Total occurrences    	33451
 Position interval parameters:
	Position interval    	20
	Number of windows    	50
	Total positions      	36257
	Degrees of freedom   	49
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-25	[-499,-480]	-489.5	28	544
	2	-24	[-479,-460]	-469.5	29	578
	3	-23	[-459,-440]	-449.5	31	585
	4	-22	[-439,-420]	-429.5	32	636
	5	-21	[-419,-400]	-409.5	32	640
	6	-20	[-399,-380]	-389.5	33	642
	7	-19	[-379,-360]	-369.5	34	676
	8	-18	[-359,-340]	-349.5	35	694
	9	-17	[-339,-320]	-329.5	36	704
	10	-16	[-319,-300]	-309.5	37	722
	11	-15	[-299,-280]	-289.5	37	740
	12	-14	[-279,-260]	-269.5	38	752
	13	-13	[-259,-240]	-249.5	38	760
	14	-12	[-239,-220]	-229.5	39	774
	15	-11	[-219,-200]	-209.5	39	780
	16	-10	[-199,-180]	-189.5	39	780
	17	-9	[-179,-160]	-169.5	39	780
	18	-8	[-159,-140]	-149.5	39	780
	19	-7	[-139,-120]	-129.5	40	788
	20	-6	[-119,-100]	-109.5	40	800
	21	-5	[-99,-80]	-89.5	40	800
	22	-4	[-79,-60]	-69.5	40	800
	23	-3	[-59,-40]	-49.5	40	800
	24	-2	[-39,-20]	-29.5	40	800
	25	-1	[-19,0]	-9.5	40	800
	26	0	[1,20]	10.5	40	800
	27	1	[21,40]	30.5	40	800
	28	2	[41,60]	50.5	40	800
	29	3	[61,80]	70.5	40	800
	30	4	[81,100]	90.5	40	800
	31	5	[101,120]	110.5	40	800
	32	6	[121,140]	130.5	40	785
	33	7	[141,160]	150.5	39	780
	34	8	[161,180]	170.5	39	780
	35	9	[181,200]	190.5	39	780
	36	10	[201,220]	210.5	39	780
	37	11	[221,240]	230.5	39	772
	38	12	[241,260]	250.5	38	760
	39	13	[261,280]	270.5	38	751
	40	14	[281,300]	290.5	37	740
	41	15	[301,320]	310.5	37	721
	42	16	[321,340]	330.5	36	702
	43	17	[341,360]	350.5	35	691
	44	18	[361,380]	370.5	34	672
	45	19	[381,400]	390.5	32	640
	46	20	[401,420]	410.5	32	640
	47	21	[421,440]	430.5	32	634
	48	22	[441,460]	450.5	30	583
	49	23	[461,480]	470.5	29	576
	50	24	[481,500]	490.5	28	515

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-489.5         	occurrences in window	1	[-499,-480]
	11	-469.5         	occurrences in window	2	[-479,-460]
	12	-449.5         	occurrences in window	3	[-459,-440]
	13	-429.5         	occurrences in window	4	[-439,-420]
	14	-409.5         	occurrences in window	5	[-419,-400]
	15	-389.5         	occurrences in window	6	[-399,-380]
	16	-369.5         	occurrences in window	7	[-379,-360]
	17	-349.5         	occurrences in window	8	[-359,-340]
	18	-329.5         	occurrences in window	9	[-339,-320]
	19	-309.5         	occurrences in window	10	[-319,-300]
	20	-289.5         	occurrences in window	11	[-299,-280]
	21	-269.5         	occurrences in window	12	[-279,-260]
	22	-249.5         	occurrences in window	13	[-259,-240]
	23	-229.5         	occurrences in window	14	[-239,-220]
	24	-209.5         	occurrences in window	15	[-219,-200]
	25	-189.5         	occurrences in window	16	[-199,-180]
	26	-169.5         	occurrences in window	17	[-179,-160]
	27	-149.5         	occurrences in window	18	[-159,-140]
	28	-129.5         	occurrences in window	19	[-139,-120]
	29	-109.5         	occurrences in window	20	[-119,-100]
	30	-89.5          	occurrences in window	21	[-99,-80]
	31	-69.5          	occurrences in window	22	[-79,-60]
	32	-49.5          	occurrences in window	23	[-59,-40]
	33	-29.5          	occurrences in window	24	[-39,-20]
	34	-9.5           	occurrences in window	25	[-19,0]
	35	10.5           	occurrences in window	26	[1,20]
	36	30.5           	occurrences in window	27	[21,40]
	37	50.5           	occurrences in window	28	[41,60]
	38	70.5           	occurrences in window	29	[61,80]
	39	90.5           	occurrences in window	30	[81,100]
	40	110.5          	occurrences in window	31	[101,120]
	41	130.5          	occurrences in window	32	[121,140]
	42	150.5          	occurrences in window	33	[141,160]
	43	170.5          	occurrences in window	34	[161,180]
	44	190.5          	occurrences in window	35	[181,200]
	45	210.5          	occurrences in window	36	[201,220]
	46	230.5          	occurrences in window	37	[221,240]
	47	250.5          	occurrences in window	38	[241,260]
	48	270.5          	occurrences in window	39	[261,280]
	49	290.5          	occurrences in window	40	[281,300]
	50	310.5          	occurrences in window	41	[301,320]
	51	330.5          	occurrences in window	42	[321,340]
	52	350.5          	occurrences in window	43	[341,360]
	53	370.5          	occurrences in window	44	[361,380]
	54	390.5          	occurrences in window	45	[381,400]
	55	410.5          	occurrences in window	46	[401,420]
	56	430.5          	occurrences in window	47	[421,440]
	57	450.5          	occurrences in window	48	[441,460]
	58	470.5          	occurrences in window	49	[461,480]
	59	490.5          	occurrences in window	50	[481,500]
seq id occ chi2 df Pval Eval sig rank -489.5 -469.5 -449.5 -429.5 -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5 430.5 450.5 470.5 490.5
cc cc 2153 121.6 49 4.1e-08 6.6e-07 6.18 1 34 24 33 38 32 26 32 33 34 30 41 37 41 42 27 40 62 55 46 49 39 39 41 53 48 56 59 68 88 64 47 44 58 47 46 46 52 50 63 41 38 52 30 38 27 33 33 32 44 21
aa aa 2579 96.5 49 6.0e-05 0.00096 3.02 2 21 43 40 48 47 47 54 42 41 53 31 58 60 47 50 55 52 60 59 39 47 60 62 50 49 54 50 49 45 61 56 48 57 45 56 68 56 78 57 53 59 50 45 59 45 49 68 56 37 63
gg gg 1859 96.4 49 6.2e-05 0.001 3.00 3 29 41 17 22 33 36 21 32 37 39 36 31 39 39 53 40 37 40 42 28 42 45 37 50 27 55 38 41 42 50 47 36 33 51 41 48 37 42 59 37 49 43 28 45 40 33 26 20 12 13
tt tt 2755 79.4 49 3.9e-03 0.063 1.20 4 36 39 44 52 44 50 41 61 66 64 45 58 46 52 70 53 38 55 52 63 72 60 61 56 56 57 44 66 51 49 65 81 48 59 64 61 63 46 41 62 53 65 68 51 60 50 59 47 60 51
tc tc 2380 68.3 49 3.6e-02 0.57 0.24 5 29 35 34 36 40 32 36 45 41 43 42 34 47 45 49 46 37 43 46 47 55 52 44 52 52 53 53 54 56 48 59 50 58 59 53 45 55 52 53 53 43 54 59 52 47 51 45 56 62 48
ca ca 2165 68.3 49 3.6e-02 0.57 0.24 6 32 32 37 33 39 32 41 41 35 47 35 43 40 50 38 36 44 40 49 44 48 48 47 36 50 38 53 42 57 48 44 54 54 40 41 47 47 53 37 45 47 38 55 32 38 50 51 31 54 52
ct ct 2276 63.7 49 7.8e-02 1.2 -0.09 7 35 37 33 38 26 32 46 39 35 36 42 47 38 42 43 38 47 51 47 50 48 44 36 49 71 54 55 42 53 54 53 46 48 50 58 46 42 54 53 52 49 44 46 51 56 37 44 54 51 34
ga ga 2123 60.9 49 1.2e-01 1.9 -0.28 8 33 30 30 37 38 46 52 39 52 43 44 42 52 43 47 55 45 48 42 58 36 48 54 49 33 40 39 47 45 48 47 46 39 24 48 41 47 44 35 49 45 44 40 40 38 48 32 52 19 30
ag ag 1999 59.2 49 1.5e-01 2.4 -0.38 9 31 27 30 25 32 35 36 45 38 39 36 41 51 39 38 38 47 32 44 45 38 62 47 47 33 31 42 49 40 44 40 46 45 36 40 38 53 51 35 43 41 29 50 43 44 53 37 40 24 29
cg cg 1481 58.9 49 1.6e-01 2.5 -0.40 10 14 21 21 25 25 23 23 17 30 22 39 33 42 29 32 38 29 31 27 30 35 30 34 27 28 35 43 39 30 31 32 27 34 42 34 32 42 27 45 36 31 37 25 37 18 22 16 24 22 15
at at 2442 51.1 49 3.9e-01 6.3 -0.80 11 30 34 31 44 59 51 45 41 50 48 53 40 47 62 60 55 48 59 53 57 41 49 58 52 45 49 43 51 46 43 58 59 49 52 45 52 52 47 43 64 56 55 57 40 47 48 55 34 42 43
gc gc 1842 47.8 49 5.2e-01 8.3 -0.92 12 29 26 24 29 26 27 35 28 26 26 47 42 41 44 32 32 48 35 42 39 33 43 38 34 47 43 57 42 37 40 33 39 46 44 43 46 45 44 49 43 44 33 42 35 35 32 28 24 23 22
gt gt 1674 47.0 49 5.6e-01 8.9 -0.95 13 25 21 32 27 26 23 21 40 37 36 41 36 33 35 38 42 38 20 39 33 54 38 35 42 40 39 42 39 31 34 36 29 40 47 31 30 34 31 40 33 32 39 27 31 31 33 26 22 29 16
ta ta 1866 41.9 49 7.5e-01 12 -1.08 14 22 31 27 29 37 35 30 34 26 31 43 41 39 38 45 40 41 46 37 44 38 37 44 42 41 35 36 37 30 36 42 41 36 52 37 36 41 38 40 49 46 36 36 34 49 33 47 25 31 25
ac ac 1707 41.6 49 7.6e-01 12 -1.09 15 24 30 33 32 22 29 37 30 30 36 34 42 32 34 26 39 36 41 30 44 43 26 39 28 44 37 37 31 46 42 34 39 32 30 35 38 32 32 39 34 40 33 27 30 29 27 38 35 38 31
tg tg 2150 40.0 49 8.2e-01 13 -1.12 16 40 27 39 41 34 38 46 47 46 49 51 47 32 53 52 53 51 44 53 50 51 39 43 53 56 56 49 43 43 48 47 40 42 37 48 48 34 42 42 44 48 48 36 34 35 41 29 31 28 22 
 Host name	rsat
 Job started	2026-03-30.164714
 Job done	2026-03-30.164715
 Seconds	0.32
	user	0.32
	system	0
	cuser	0
;	csystem	0