; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	24	17	76	3	0	3	4	98	105	82	30	24
c	16	29	11	0	11	101	3	5	0	2	16	23
g	22	13	4	104	98	5	0	6	2	11	15	32
t	47	50	18	2	0	0	102	0	2	14	48	30
//
; Sites	109
>site_0
TTAGGCTAATAA
>site_1
TTAGCCTAAATA
>site_2
CGTGGCTAAACT
>site_3
ATGGGCTAAAAT
>site_4
TTAGGCTAATTA
>site_5
TTATGCTAAAAT
>site_6
GAAGGCTAACGA
>site_7
CACGGCTAAGTG
>site_8
TCAGGGTAAATA
>site_9
TCAGGCTCAATT
>site_10
ATAGGATAAATT
>site_11
GAAGGCTCAACT
>site_12
ATCGGCTAAGCT
>site_13
AATGGCTAAGTT
>site_14
ATAGGCTGAATG
>site_15
AAAGGCTAAATG
>site_16
TGAGGCTAAATG
>site_17
CAAAGCTAAAGG
>site_18
ACGGGCTAAAAG
>site_19
CCAGGCTCAATG
>site_20
CGAGGCTGAAGT
>site_21
GCCGGCTAAAAG
>site_22
TGAGGCTAAACC
>site_23
TTAGGCAAAAAT
>site_24
TTTGGCTAAATT
>site_25
GCCGGCTAAATA
>site_26
GAAGGCTAAATC
>site_27
TTAGGCTAATAG
>site_28
TCAGGCTAAAGG
>site_29
AACGGCTAAACG
>site_30
GGCGGCTAAACA
>site_31
AGAGGCAAAATA
>site_32
ATAGGCTAAATT
>site_33
CCTGGCTAATAG
>site_34
ACAGGATAAACT
>site_35
GTTGGCTAATAG
>site_36
GTTGGCTAAAAG
>site_37
GTTGGCTAAAGG
>site_38
GTTGGCTAAAAG
>site_39
GTTGGCTAAAAA
>site_40
GTTGGCTAAAAG
>site_41
GTTGGCTAAAAG
>site_42
GTTGGCTAAAAG
>site_43
ACAGGCTCAAAA
>site_44
AAAGGATAAATA
>site_45
TGAGGGTAAATC
>site_46
AAAGGCTCAATA
>site_47
CAAGGCTAGAAC
>site_48
TCAGGCTGAAGT
>site_49
GTCGGCTAAAAT
>site_50
ATAGCCTAAAAG
>site_51
GGCGGCTAATGT
>site_52
TTAGGCTATAAT
>site_53
GCAGGCTAGACT
>site_54
AATGGCTAAGTA
>site_55
TTAGGCTATAAT
>site_56
ACAGGCTAAATG
>site_57
TTGGGCTAACTA
>site_58
ATAGCCTAAATC
>site_59
GGAGGCTGAAAA
>site_60
TCAGGCTAAGAA
>site_61
TTAGCCTAAAGA
>site_62
TTAGGCTAAACG
>site_63
CTAGGCTAAGTC
>site_64
CCTGGCTAAATC
>site_65
CAAGGCCAAATC
>site_66
TTAGGCTAATTA
>site_67
TTAGCCTAAAGC
>site_68
ACTGGCTAAATT
>site_69
TTAGGCTAATCC
>site_70
TTAGCCTAAATA
>site_71
TCCGGCTAATGT
>site_72
ATAGGCTAAATT
>site_73
ACAGGCTAAGAG
>site_74
TCAGGCTGAATC
>site_75
CACGGCTAAATG
>site_76
TTTGGCTAATAG
>site_77
ATAGGCAAAATG
>site_78
TTAGCCTAAAAG
>site_79
TTAGGCTAATAC
>site_80
GGTGGCTAAACT
>site_81
TTATGCTAAACC
>site_82
CGAGGGTAAAGT
>site_83
ACAGCCTAAAGC
>site_84
TTAGGCTAAACC
>site_85
TTAGCCTAAAGC
>site_86
GTAAGCTAAATC
>site_87
TCAGGCTAAGTG
>site_88
TGAAGCTAAATG
>site_89
TAAGGCCAAAAA
>site_90
TCAGGCTAATTT
>site_91
GGAGGGTAAAAT
>site_92
TCAGGCTAAACT
>site_93
TTAGGCTAATCA
>site_94
TCAGGCTGAACT
>site_95
TCAGGCTAAATG
>site_96
GAAGGGTAAATG
>site_97
CTAGGCTAAATT
>site_98
ACAGGCTAAGAC
>site_99
TTAGGCAAAAGA
>site_100
TTAGCCTAAAGC
>site_101
TTAGGCTAATTA
>site_102
CAAGGCCAAATC
>site_103
CCTGGCTAAATC
>site_104
CTAGGCTAAGTC
>site_105
TCCGGCTAAATT
>site_106
TCGGGCTAAGTG
>site_107
TTAGCCTAAATA
>site_108
TTAGGCTAAATC
a	18	23	13	18	3	0	2	0	2	2	56	22	34
c	17	23	10	9	87	82	90	84	0	83	14	21	14
g	24	19	5	5	0	1	2	8	90	6	9	20	11
t	35	29	66	62	4	11	0	2	2	3	15	31	35
//
; Sites	94
>site_0
TATTCTCCGCAAA
>site_1
TATTCTCCGCACT
>site_2
CCTACCCCGCATA
>site_3
CTCTCTCCGCAAC
>site_4
CGTACCCGGCACA
>site_5
GGATCCGCGCACT
>site_6
GAATCCCCGCAGA
>site_7
GTCCCCCCGCATT
>site_8
GGTCCCCCGCCTT
>site_9
TATTTCCCGCGTA
>site_10
TTTACCCGGCATA
>site_11
CTTTCCCCGCAAT
>site_12
TTATCCCCGCATT
>site_13
ACTGCCCTGCAGT
>site_14
TTTTCCCCACCGC
>site_15
GTAGCCCCGCGTC
>site_16
TTTTACCCGCGCC
>site_17
CCTACCCCGCATA
>site_18
TATTCTCCGCACT
>site_19
TATTCTCCGCAAA
>site_20
TGCTCCCCGTATA
>site_21
TGTTCCCCTCAGT
>site_22
TGGTCCCCGCTAA
>site_23
GCCACCCCGCATT
>site_24
CCTTCTCCGCCTC
>site_25
TATTCCCCGCTTT
>site_26
GCTTCCCCGCAAA
>site_27
AAATACCCGCAGA
>site_28
TGTACCCCGCCTA
>site_29
GGGTCCCGGCATA
>site_30
TCTTCGCCGCAGT
>site_31
TATACCCCGCCGG
>site_32
CTATCCCGGCAGA
>site_33
GGTTCCCCACAGA
>site_34
ACTTCCCCGCCTC
>site_35
GATTCCACGCACC
>site_36
TCGGCCCCGCAAA
>site_37
CCTTCCCCGATGC
>site_38
GAGGCCCCGCACC
>site_39
TAATCCCTGCACT
>site_40
CGTGCCCCGGAAA
>site_41
ACTTCCCCGCAAA
>site_42
ATCCCCCCGCAAT
>site_43
CTTTCCGCGCTGA
>site_44
TCTACCCCGGACT
>site_45
GGAACCCCGCAAT
>site_46
CATTTCCCGCCAA
>site_47
TACCCCCCGCACT
>site_48
GCTACCCCGCATC
>site_49
AAATCCCCGCTCG
>site_50
ATTTCCCCGACTT
>site_51
GTTTCCCCGCATA
>site_52
AATACCCCGCTTT
>site_53
ATTTCCCCGGATT
>site_54
GATTCCCCGTGAG
>site_55
GGGTCCCCGCATC
>site_56
TCTCCCCCGCGTT
>site_57
TGTACCCCGCGCT
>site_58
GCTACCCGGCAAA
>site_59
GTTTCCCCGCATT
>site_60
TTTACCCCGCTTG
>site_61
CTCTCCCCGCTTC
>site_62
GCTTCCCCGCGAG
>site_63
ATTTCTCCGCAAA
>site_64
TTCTCCACGCAGA
>site_65
ATTTCCCGGCAGT
>site_66
TATTCCCCGGTGT
>site_67
GGTTCCCCTCTCG
>site_68
TTTTTCCCGCCGT
>site_69
CCTCCCCCGCTTA
>site_70
GTTTCCCCGCAAG
>site_71
TTTTCCCGGCTCT
>site_72
TCTTCCCCGGGCG
>site_73
TTTTCCCGGCCGA
>site_74
CGACCCCCGCAAG
>site_75
TGTACTCCGCACT
>site_76
TTTTCCCCGCCTT
>site_77
TGTACCCCGCCTA
>site_78
AAATACCCGCAGA
>site_79
GCTTCCCCGCAAA
>site_80
TATTCCCCGCTTT
>site_81
ATTTCCCCGCACA
>site_82
CTTTCCCCGGTAT
>site_83
ACTTCCCCGTGGG
>site_84
AAATCCCCGCTCG
>site_85
GCTACCCCGCATC
>site_86
TACCCCCCGCACT
>site_87
CATTTCCCGCCAA
>site_88
TCTTCTCCGCAGT
>site_89
CGTTCTCCGCAAA
>site_90
ATCTCCCCGCATT
>site_91
AGTCCTCCGCACT
>site_92
GTTTCCCCGCCGA
>site_93
ACAACCCCGCACC
a	11	8	0	0	0	0	0	0	22	18
c	11	11	49	0	0	0	0	49	17	10
g	13	15	0	0	0	49	49	0	6	12
t	14	15	0	49	49	0	0	0	4	9
//
; Sites	49
>site_0
CTCTTGGCAC
>site_1
ACCTTGGCAG
>site_2
ACCTTGGCCC
>site_3
CACTTGGCAC
>site_4
CGCTTGGCGA
>site_5
GACTTGGCCA
>site_6
TTCTTGGCTA
>site_7
CTCTTGGCAC
>site_8
AACTTGGCGG
>site_9
GCCTTGGCAC
>site_10
TGCTTGGCCG
>site_11
CGCTTGGCAA
>site_12
TGCTTGGCAG
>site_13
TGCTTGGCCA
>site_14
GGCTTGGCCG
>site_15
TGCTTGGCAT
>site_16
ATCTTGGCTT
>site_17
CGCTTGGCAG
>site_18
TTCTTGGCAA
>site_19
AACTTGGCCC
>site_20
GACTTGGCTG
>site_21
GCCTTGGCAA
>site_22
TCCTTGGCCT
>site_23
TTCTTGGCCA
>site_24
GACTTGGCCC
>site_25
GTCTTGGCAT
>site_26
ATCTTGGCGG
>site_27
TGCTTGGCAT
>site_28
ACCTTGGCAA
>site_29
TTCTTGGCAA
>site_30
TGCTTGGCAG
>site_31
CGCTTGGCAA
>site_32
CCCTTGGCCA
>site_33
AGCTTGGCAA
>site_34
GACTTGGCAG
>site_35
CTCTTGGCCT
>site_36
CCCTTGGCCA
>site_37
CCCTTGGCCT
>site_38
GGCTTGGCGA
>site_39
GTCTTGGCCA
>site_40
GTCTTGGCGC
>site_41
GGCTTGGCCC
>site_42
TTCTTGGCTC
>site_43
ACCTTGGCCT
>site_44
GACTTGGCCG
>site_45
TTCTTGGCAA
>site_46
ACCTTGGCAA
>site_47
TGCTTGGCAT
>site_48
ATCTTGGCGG
a	19	12	9	5	1	4	2	75	70	75	25	19
c	20	25	21	3	0	3	3	3	7	1	14	17
g	24	21	45	71	83	74	3	3	3	4	21	19
t	21	26	9	5	0	3	76	3	4	4	24	29
//
; Sites	84
>site_0
ACATGGTAAATT
>site_1
CTCGGGTAAAAT
>site_2
ATGGGCTAAAAT
>site_3
TTCGGGTAAATG
>site_4
GTGGGGTAAGAG
>site_5
TCGGGGTAAAGA
>site_6
TTGGGATAAAAT
>site_7
GGGGGGTGAAGT
>site_8
TCAGGGTAAATA
>site_9
GCCGGGTAAACA
>site_10
GTCGGGTAAGTA
>site_11
TCGTGGTAAATG
>site_12
ACGGGCTAAAAG
>site_13
TCTAGGTAAAAT
>site_14
CTGGGGTCAAGA
>site_15
GTGGGGAAAATT
>site_16
CTTTGGTAAATA
>site_17
CGCGGGTAAAAT
>site_18
CTCGGGTAAAAT
>site_19
ACATGGTAAATT
>site_20
TGATGGTAAAGT
>site_21
TTCGGGTTAATA
>site_22
CACGGTTAAACG
>site_23
CTGGGGTACAGT
>site_24
GCGGGGTACAAG
>site_25
AACGGCTAAACG
>site_26
ATCGGGTATATC
>site_27
CGGGGGTAAGCC
>site_28
CGTCGGTAAATT
>site_29
GCGGGGTATACA
>site_30
GAGGGGGAAATA
>site_31
GAGGGGTAAAAT
>site_32
AGGGGGGAAATT
>site_33
GAGGGGTACAGT
>site_34
ATGGGGTGAATG
>site_35
CTTGGGTAAAAT
>site_36
GCGGGGTGAAGT
>site_37
GTTGGGTAAAAA
>site_38
CCTGGGTAAATC
>site_39
TGAGGGTAAATC
>site_40
AGCGGGTAGAAC
>site_41
ACTAGGTAAACT
>site_42
TTGGGATAAACC
>site_43
TGGGGGCAAATG
>site_44
TGGGGGTACAGG
>site_45
ACCGGGTAATCT
>site_46
ATGGAGTAAATA
>site_47
CCGGGGTAGAAG
>site_48
CTGGGGCAAAAG
>site_49
GGGGGTTAAATC
>site_50
CGGGGGTTAAAT
>site_51
TGGGGATAAAGT
>site_52
GCCGGGTAAATT
>site_53
AAGAGGTAAAGG
>site_54
GTTGGGTAAAGC
>site_55
TTTCGGTAAAAT
>site_56
GCGGGGTACAGG
>site_57
TGGGGGTAATCA
>site_58
GCGGGGTAAAAG
>site_59
TTCGGGTAAATC
>site_60
TACGGGTATACT
>site_61
CTCGGGTAACAG
>site_62
CGAGGGTAAAGT
>site_63
ACCGGGTAATGA
>site_64
GAGGGGTCAAAG
>site_65
ACGGGATAAAGT
>site_66
GAAGGGTATACC
>site_67
CACGGGTAATTA
>site_68
TTCGGGTAAAGA
>site_69
GGAGGGTAAAAT
>site_70
AGGGGGTCAACC
>site_71
GCCCGGTAAAAC
>site_72
GCGGGGAAAAGA
>site_73
AGGGGGGAAATC
>site_74
GAAGGGTAAATG
>site_75
GCGGGGTACAAG
>site_76
CTGGGGTACAGT
>site_77
TGGAGGTAAAGA
>site_78
TGGGGGTAAGCC
>site_79
CGGGGTTAAACC
>site_80
CCGGGGTTAAAC
>site_81
AACAGGTAAAGA
>site_82
ATGGGGCAAAGA
>site_83
TCGGGGTAGAAC
a	9	7	0	0	2	0	35	0	9	8
c	11	14	35	0	33	35	0	35	7	15
g	7	6	0	0	0	0	0	0	8	3
t	8	8	0	35	0	0	0	0	11	9
//
; Sites	35
>site_0
CACTCCACTA
>site_1
ACCTCCACAT
>site_2
ATCTCCACCC
>site_3
CTCTCCACAA
>site_4
TGCTCCACTC
>site_5
ACCTCCACAT
>site_6
CACTCCACTA
>site_7
AGCTCCACGA
>site_8
GGCTCCACTG
>site_9
GTCTCCACAC
>site_10
ACCTCCACTT
>site_11
CCCTCCACTT
>site_12
CCCTCCACCC
>site_13
GCCTCCACAC
>site_14
GTCTCCACTC
>site_15
CTCTACACGT
>site_16
CCCTCCACTT
>site_17
ACCTCCACTT
>site_18
GTCTCCACCC
>site_19
TACTCCACTC
>site_20
TACTACACAA
>site_21
CGCTCCACTC
>site_22
TACTCCACAC
>site_23
TCCTCCACAA
>site_24
GGCTCCACGG
>site_25
TTCTCCACGC
>site_26
GCCTCCACCG
>site_27
CCCTCCACCC
>site_28
TTCTCCACAT
>site_29
ACCTCCACCC
>site_30
ACCTCCACCT
>site_31
AACTCCACGA
>site_32
CGCTCCACGA
>site_33
CACTCCACGC
>site_34
TCCTCCACGC
; Host name	rsat
; Job started	2026-03-30.164719
; Job done	2026-03-30.164719
; Seconds	0.15
;	user	0.15
;	system	0.01
;	cuser	0
;	csystem	0
