; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	29	25	8	2	60	2	1	1	3	64	63	54	10	15	16
c	17	8	3	11	5	0	18	63	1	1	0	2	7	20	18
g	11	4	5	4	2	64	50	4	0	4	2	3	6	17	22
t	12	32	53	52	2	3	0	1	65	0	4	10	46	17	13
//
; Sites	69
>site_0
ATTTAGGCTAATAAG
>site_1
TATTAGCCTAAATAC
>site_2
ATTTCGGGTAAATGT
>site_3
AATTAGCCTAATTCA
>site_4
AATTAGGCTAATTAC
>site_5
TATTATGCTAAAATA
>site_6
AATCAGGGTAAATAA
>site_7
ATTCAGGCTCAATTC
>site_8
AAATAGGATAAATTG
>site_9
CTATAGGCTGAATGC
>site_10
AGAAAGGCTAAATGA
>site_11
TTTGAGGCTAAATGC
>site_12
GCTGAGGCTAAACCG
>site_13
AATTAGGCAAAAATA
>site_14
CTTTTGGCTAAATTC
>site_15
TCGCCGGCTAAATAG
>site_16
GCGAAGGCTAAATCG
>site_17
CATTAGGCTAATAGA
>site_18
ATTCAGGCTAAAGGC
>site_19
CTTTAGCCTGAATCT
>site_20
ATATAGGCTAAATTG
>site_21
ATTTAGCCTATATAG
>site_22
CATTAGCCCAAATGC
>site_23
TAGTTGGCTAAAAGG
>site_24
GTTGAGGGTAAATCA
>site_25
GTGTCGGCTAAAATA
>site_26
CATTAGGCTATAATA
>site_27
CATTAGATTAAATGA
>site_28
TATTAGGCTATAATT
>site_29
GTACAGGCTAAATGC
>site_30
GCTTGGGCTAACTAC
>site_31
TAATAGCCTAAATCT
>site_32
GTTTAGCCTAAAGAG
>site_33
CTTTAGGCTAAACGT
>site_34
ACTTAGCCTAGATTG
>site_35
ATCTAGGCTAAGTCT
>site_36
CTTTAGGCTAATTAC
>site_37
AATTAGCCTAAAGCC
>site_38
ATTTAGGCTAATCCA
>site_39
GATTAGCCTAAATAG
>site_40
ATTTAGCCTATATAG
>site_41
ATATAGGCTAAATTG
>site_42
AATCAGGCTGAATCG
>site_43
AGTTCGGGTAAATCC
>site_44
TAATAGGCAAAATGT
>site_45
TATTAGCCTAAAAGG
>site_46
TTTTAGGCTAATACG
>site_47
CATTATGCTAAACCT
>site_48
CTTTAGGCTAAACCC
>site_49
GTTTAGCCTAAAGCT
>site_50
TAGTAAGCTAAATCT
>site_51
ACTTAGCCTGAATTG
>site_52
ATTCAGGCTAAGTGA
>site_53
CATTGTGCTAAATCC
>site_54
ATTGAAGCTAAATGT
>site_55
TATCAGGCTAATTTG
>site_56
CTTCAGGCTAAACTA
>site_57
AGTTAGGCTAATCAG
>site_58
GATTAGCCTAACTGC
>site_59
CTTCAGGCTAAATGG
>site_60
CCCTAGGCTAAATTA
>site_61
GTTTAGGCAAAAGAA
>site_62
AATTAGCCTAAAGCC
>site_63
CTTTAGGCTAATTAC
>site_64
ATCTAGGCTAAGTCT
>site_65
ACTTAGCCTAGATTG
>site_66
CGTCCGGCTAAATTG
>site_67
ATTTAGCCTAAATAT
>site_68
ATTTAGGCTAAATCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	15	17	13	15	2	0	3	0	1	0	56	17	26
c	9	17	10	6	66	56	65	63	0	66	6	18	10
g	20	16	5	2	0	1	1	5	67	2	2	13	7
t	25	19	41	46	1	12	0	1	1	1	5	21	26
//
; Sites	69
>site_0
TATTCTCCGCAAA
>site_1
TATTCTCCGCACT
>site_2
CCTACCCCGCATA
>site_3
CTCTCTCCGCAAC
>site_4
CGTACCCGGCACA
>site_5
GGATCCGCGCACT
>site_6
GAATCCCCGCAGA
>site_7
GTCCCCCCGCATT
>site_8
TTTACCCGGCATA
>site_9
CTTTCCCCGCAAT
>site_10
TTATCCCCGCATT
>site_11
CCTACCCCGCATA
>site_12
TATTCTCCGCACT
>site_13
TATTCTCCGCAAA
>site_14
TGCTCCCCGTATA
>site_15
TGTTCCCCTCAGT
>site_16
TGGTCCCCGCTAA
>site_17
GCCACCCCGCATT
>site_18
TATTCCCCGCTTT
>site_19
GCTTCCCCGCAAA
>site_20
AAATACCCGCAGA
>site_21
TGTACCCCGCCTA
>site_22
GGGTCCCGGCATA
>site_23
TCTTCGCCGCAGT
>site_24
TATACCCCGCCGG
>site_25
CTATCCCGGCAGA
>site_26
GGTTCCCCACAGA
>site_27
ACTTCCCCGCCTC
>site_28
GATTCCACGCACC
>site_29
TCGGCCCCGCAAA
>site_30
CTCTTCCCGCAAC
>site_31
GAGGCCCCGCACC
>site_32
TAATCCCTGCACT
>site_33
ACTTCCCCGCAAA
>site_34
ATCCCCCCGCAAT
>site_35
TCTACCCCGGACT
>site_36
GGAACCCCGCAAT
>site_37
TACCCCCCGCACT
>site_38
GCTACCCCGCATC
>site_39
AAATCCCCGCTCG
>site_40
GCATCTCCGCAGC
>site_41
GTTTCCCCGCATA
>site_42
ACTTCTACGCACG
>site_43
ATTTCCCCGGATT
>site_44
GGGTCCCCGCATC
>site_45
TGTACCCCGCGCT
>site_46
GTTTCCCCGCATT
>site_47
GCTTCCCCGCGAG
>site_48
ATTTCTCCGCAAA
>site_49
TTCTCCACGCAGA
>site_50
ATTTCCCGGCAGT
>site_51
GTTTCCCCGCAAG
>site_52
CGACCCCCGCAAG
>site_53
TGTACTCCGCACT
>site_54
TTTTCCCCGCCTT
>site_55
TGTACCCCGCCTA
>site_56
AAATACCCGCAGA
>site_57
GCTTCCCCGCAAA
>site_58
TATTCCCCGCTTT
>site_59
ATTTCCCCGCACA
>site_60
AAATCCCCGCTCG
>site_61
GCTACCCCGCATC
>site_62
TACCCCCCGCACT
>site_63
TCTTCTCCGCAGT
>site_64
CGTTCTCCGCAAA
>site_65
ATCTCCCCGCATT
>site_66
AGTCCTCCGCACT
>site_67
GTTTCCCCGCCGA
>site_68
ACAACCCCGCACC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	12	14	1	59	2	3	3	1	1	6	19	12
c	18	17	54	1	3	3	2	0	58	6	14	14
g	14	11	4	1	52	50	53	1	1	15	12	18
t	17	19	2	0	4	5	3	59	1	34	16	17
//
; Sites	61
>site_0
CGCAGGATCGGT
>site_1
ACCAGGGTCTCT
>site_2
TACATGGTCGGG
>site_3
GTAAGGGTCCGG
>site_4
TTCAGGGTCCAA
>site_5
GCCAAGGTCTTG
>site_6
GTCCGGGTCTTC
>site_7
TGCAGAGTCGTG
>site_8
GCCAGGATCTGA
>site_9
GACAGGGGCTAG
>site_10
ATCAGGGTCTCG
>site_11
ACCAGGGTCGAA
>site_12
GACAGGGTCTAG
>site_13
ACCAGGGTCTCT
>site_14
CGCAGGATCGGT
>site_15
ACCAGGTTCTCC
>site_16
CGTAGGGTCGTC
>site_17
CCCAGGGTCTTC
>site_18
TACAGTGTCGTC
>site_19
CCCAGGTTCTCT
>site_20
ATCAGGGTTTCC
>site_21
TGGAGGGTCTAG
>site_22
CTCAGTGTCGAT
>site_23
GTCAGTGTCACA
>site_24
CACAGGGTCTTT
>site_25
TTCGGGGTCTAC
>site_26
ATCAGGGTCTAC
>site_27
TTCAGGGTCTCG
>site_28
AACAGAGTCTAG
>site_29
CCCACGGTCAAC
>site_30
AACATGGTCGGT
>site_31
TGCACGGTCCAG
>site_32
CCGAGGGTCTCA
>site_33
TCCAGAGTCTAG
>site_34
CGCATGGTCGCA
>site_35
TTGAGGGTCTCC
>site_36
GACAGGCTCTTA
>site_37
GTCAGGGTCCAT
>site_38
GTCAGCGTCATG
>site_39
CTCAGCGTCAGT
>site_40
TCCAGCGTCGCT
>site_41
CTCAGTGTCGAT
>site_42
TGGAGGGTCTAG
>site_43
TACAGGGTCTGG
>site_44
GTCACGGTCTTA
>site_45
TACAGGCTCGTA
>site_46
CACAGGGTCTCA
>site_47
CTCAGGGTCTCT
>site_48
GCCAGGGACTTG
>site_49
CATAGGGTCGAG
>site_50
ACCAGGGTATGA
>site_51
CGCAGGGTCTAT
>site_52
GGCAGGGTGTTA
>site_53
CTCAGGGTCAGG
>site_54
TGCAAGGTCTTT
>site_55
AACATGGTCAGT
>site_56
TTCAGGTTCTAC
>site_57
ACCAGGGTCCAC
>site_58
TACAGTGTCGTC
>site_59
CCCAGGGTCTTC
>site_60
GCCAGGGTCCGT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	8	9	5	1	0	3	3	62	60	58	20	21
c	13	21	51	1	0	7	2	0	0	2	13	10
g	24	16	4	62	64	49	10	1	1	1	11	15
t	19	18	4	0	0	5	49	1	3	3	20	18
//
; Sites	64
>site_0
CTCGGGTAAAAT
>site_1
ATCGGGCAAAGT
>site_2
TTCGGGTAAATG
>site_3
TCGGGGTAAAGA
>site_4
CCCGGTTAAATG
>site_5
TCAGGGTAAATA
>site_6
GCCGGGTAAACA
>site_7
GTCGGGTAAGTA
>site_8
TGCGGGGAAAGG
>site_9
TCCGGATAAATG
>site_10
GCCGGCTAAAAG
>site_11
CGCGGGTAAAAT
>site_12
CTCGGGTAAAAT
>site_13
TTCGGGTTAATA
>site_14
GCCGGCTAAATA
>site_15
CACGGTTAAACG
>site_16
CTCGGATAAAGA
>site_17
AACGGCTAAACG
>site_18
ATCGGGTATATC
>site_19
GCGGGGTATACA
>site_20
GGCGGCTAAACA
>site_21
GAGGGGTAAAAT
>site_22
CTTGGGTAAAAT
>site_23
GTTGGGTAAAAA
>site_24
TGCGGTTAAAAA
>site_25
CCTGGGTAAATC
>site_26
TGAGGGTAAATC
>site_27
GTCGGCTAAAAT
>site_28
TTCGGGTAACCT
>site_29
TGCGGTTAAAAA
>site_30
AGCGGGTAGAAC
>site_31
CCCGGGTGAAAT
>site_32
ACCGGGTAATCT
>site_33
GACGGATAAAAG
>site_34
GTCGGGCAAAAC
>site_35
GTCGGGGAAATT
>site_36
GCCGGGTAAATT
>site_37
TGCGGGGAAACG
>site_38
GTTGGGTAAAGC
>site_39
TCCGGGGAAATG
>site_40
GCCGGTTAAATT
>site_41
TGCGGGGAAACA
>site_42
CACGGCTAAATG
>site_43
GCGGGGTAAAAG
>site_44
TTCGGGTAAATC
>site_45
TACGGGTATACT
>site_46
CTCGGGTAACAG
>site_47
CGAGGGTAAAGT
>site_48
ACCGGGTAATGA
>site_49
CACGGGTAATTA
>site_50
TTCGGGTAAAGA
>site_51
GGCGGGAAAAAA
>site_52
GGAGGGTAAAAT
>site_53
TGCGGGGAAACT
>site_54
GCCGGGAAAACA
>site_55
GCCGGGAAAAGC
>site_56
GCCCGGTAAAAC
>site_57
GGCGGGGAAAAG
>site_58
GAAGGGTAAATG
>site_59
TGCGGGGAAATC
>site_60
ACCGGGGAAAGA
>site_61
TCCGGCTAAATT
>site_62
AACAGGTAAAGA
>site_63
GGCGGGGAAACA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	21	26	44	7	1	78	3	3	6	3	62	65	35	21
c	23	17	7	4	3	0	0	60	72	3	4	3	10	18
g	22	14	3	3	0	1	73	14	1	2	12	5	13	20
t	15	24	27	67	77	2	5	4	2	73	3	8	23	22
//
; Sites	81
>site_0
TTATTAGCCTAAAT
>site_1
TATTTAGGCTAATA
>site_2
GAATTAGGCTAATT
>site_3
TAATTAGCCTAATT
>site_4
ATTTTAGCATAATA
>site_5
TCGTTAGCCTTCCA
>site_6
TCATCAGCCTTAAT
>site_7
CATTTAGCCTCAAA
>site_8
ATAACAGCCTAAGG
>site_9
GGTTTAGCCTCAGC
>site_10
ATTTTTGCCTAATT
>site_11
CCAGTAGCCTACAC
>site_12
AATTTAGCCAAAAG
>site_13
GTATTAGCGTCAGA
>site_14
CCATTAGGCTAATA
>site_15
CTATTAGCCTAATG
>site_16
CCTTTAGCCTGAAT
>site_17
CGATTAACTTAACG
>site_18
AATTTAGCCTATAT
>site_19
CCATTAGCCCAAAT
>site_20
CGATTAGCATAATT
>site_21
CTATTAGCCAACTG
>site_22
CTATTATCATAATA
>site_23
GCCATAGCCTAAAA
>site_24
GCATTAGGCTATAA
>site_25
ATTATAGCCTAATG
>site_26
ATTATAGCCTAATA
>site_27
ATATTAGGCTATAA
>site_28
CATTTAGCCTGTAC
>site_29
TAGTTAGCCCAAGC
>site_30
ATAATAGCCTAAAT
>site_31
CTATTATCCTCACC
>site_32
AAATTAGACTGAGA
>site_33
TTCTTAGCCTGAGG
>site_34
TCTTTAGGCTAAAC
>site_35
CGTTTAGCCTAAAG
>site_36
GACTTAGCCTAGAT
>site_37
TAATTAGCCTAAAG
>site_38
GCTTTAGGCTAATT
>site_39
AGATTAGTCGAACG
>site_40
ACACTATCCTAAGA
>site_41
GGATTAGCCTAAAT
>site_42
TATTTAGGCTAATC
>site_43
ACATTAGCCGGACG
>site_44
AATTTAGCCTATAT
>site_45
CGATTAACTTAACG
>site_46
CTCTTAGCCTGTAC
>site_47
CTATTAGCCAAAAC
>site_48
TTATTAACCTAACA
>site_49
CTTTTAGGCTAATA
>site_50
GTATTAGCCTAAAA
>site_51
CTAGTGGCCTAACA
>site_52
GGTTTAGCATAATG
>site_53
ACATTATGCTAAAC
>site_54
GGTTTAGCCTAAAG
>site_55
GCTTTAGGCTAAAC
>site_56
CACTTAGCCTGAAT
>site_57
CAACTAGCATAAGG
>site_58
ATAATATCCTAACT
>site_59
CCATTAGCCCGAGC
>site_60
GAAGTAGCATAAGC
>site_61
AAATTAGCCTGATA
>site_62
GAAATAGCCTATAC
>site_63
AGTTTAGCCTGAAG
>site_64
AGATTAGTCTAGTA
>site_65
ATACTAGACTAATC
>site_66
TGATTAGCCTAACT
>site_67
CAGTTAGGCTAATC
>site_68
CATTTAGCCTGAAG
>site_69
AATTTAGCCTAGGG
>site_70
GAATAAGTCTAAGT
>site_71
GTCTTAGCCTGTGG
>site_72
TCTTTTGCCTAAAC
>site_73
GCTTTAGGCTAATT
>site_74
TAATTAGCCTAAAG
>site_75
GACTTAGCCTAGAT
>site_76
GGATCAGCCTTAAA
>site_77
GGATTAGACTAGTA
>site_78
GTACTAGTCTAATC
>site_79
TATTTAGGCTAAAT
>site_80
GATTTAGCCTAAAT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.164711_2026-03-30.164711_1nojY4/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-03-30.164724
; Job done	2026-03-30.164726
; Seconds	0.18
;	user	0.18
;	system	0.05
;	cuser	1.41
;	csystem	0.27
