; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	26	26	18	12	57	1	1	2	7	78	81	71	13	26	23
c	19	15	12	21	13	1	11	85	4	3	1	1	12	16	24
g	16	8	9	13	1	85	76	1	3	6	1	5	9	26	23
t	28	40	50	43	18	2	1	1	75	2	6	12	55	21	19
//
; Sites	89
>site_0
TTCTAGGCTATACGA
>site_1
CATGAGGCTAATCGC
>site_2
TATTAGGCTGAAATG
>site_3
GTCTTGGCCAAATCG
>site_4
GTTTAGGTTAACTTT
>site_5
GTTTAGGCTAAAACA
>site_6
TTTTAGCCTAAACGA
>site_7
CCGGCGGCTAAAGGC
>site_8
ATGGCGGCTAAATAA
>site_9
AATGAGGCGAAAGAG
>site_10
TTTTAGGCGCAATTT
>site_11
TAACAGGCTAAAACA
>site_12
TATCTGGATAAATGA
>site_13
GTATTGCCTAAATTA
>site_14
CCACAGGCTAAAATG
>site_15
TATTAGGCTATATGC
>site_16
ATTCAGCCTAAAACG
>site_17
TTTTAGGCTGAATAG
>site_18
CACACGGCTAAGTTG
>site_19
GATTAGCCTAAGTGG
>site_20
ACTTAGGCTAATCTC
>site_21
ACTCAGGCAAAACAA
>site_22
GTTCAGGCTAAATAT
>site_23
CTTTAGCCTAAAGTG
>site_24
CTTTAGGCTAAAGGC
>site_25
CACAAGGCCAAATCG
>site_26
GGTCCGGCTAAATGA
>site_27
ATTCCGGCTATATTG
>site_28
TTTATGGCTAAAACA
>site_29
ACTCAGGGTAAATTG
>site_30
TGTGAGGATAAAGTT
>site_31
CTCTTCGCTAAATGC
>site_32
GTTTAGGCTAAATCA
>site_33
ATTTAGCCTAAACCA
>site_34
TATTAGCCCAAATGC
>site_35
ATTTGGGCTAATACA
>site_36
TATACGGCTAATTCC
>site_37
TTTTTTGCTAAATTT
>site_38
GATGAGGCTAAAAGC
>site_39
ACAGAGGCTAAACAA
>site_40
GTACAGGCTTAATGC
>site_41
CGTTAGGCTATAAAT
>site_42
TTTTTGGCTGAATGG
>site_43
CGGTCGGCAAAATTG
>site_44
ATTCAGGCTCAATAC
>site_45
GAACTGGCTAAATCA
>site_46
GGTACGACTAAATGT
>site_47
TTTGAGCCTAAAAAC
>site_48
TTTTAGGCTCAAAAC
>site_49
CCAATGGCTAAAAGT
>site_50
CAAGTGGCTAAACGT
>site_51
TCCCTGGCTAAATAC
>site_52
TAGTAGGCAAAGTCA
>site_53
CAGCTGGCTAAATGC
>site_54
AATCAGGCTAAATCA
>site_55
CTCTAGGCTTATTGT
>site_56
AAAAAGGCAAAATAT
>site_57
GGATTTGCTAAATTG
>site_58
TATTAGGCTGAAGAT
>site_59
AAAGTGGCTAAATGG
>site_60
TTCTAGGCTAGGTAT
>site_61
CTTGAGGCTAATGAA
>site_62
TTTAAGTCTAAATAC
>site_63
CGCATGGCTAATTGC
>site_64
ATTTAGCCTGAATAG
>site_65
ATTCAGGCTAAATAG
>site_66
AAGTAGGCAAAAGCG
>site_67
TTGCCGGCTAAGTAG
>site_68
GTATTGGCTAAATGG
>site_69
ACGTAAGCTAAACGC
>site_70
ATTTAGCCTGAATAC
>site_71
ATTCAGGCTAAATAT
>site_72
TTTTAGGCAATATTC
>site_73
ACGTAGGCTAATTGA
>site_74
AAATAGGCTAAATCA
>site_75
TTCTTGGCTAATTTT
>site_76
ACCACGGCTAAACGA
>site_77
CCTCTGGCTATATAC
>site_78
ATTTAGGCTAAATAT
>site_79
ATTTAGCCTAAATAC
>site_80
GATTAGGCTAAAGTA
>site_81
CCAGCGGCTAAATTG
>site_82
ATAACGGCTAATTTC
>site_83
GATGAGGCCAAATTA
>site_84
TCCCCGGCTAAACCT
>site_85
CAATAGGCTAATAAC
>site_86
TGAAAGGCTACATAT
>site_87
TCTCAGGCGAAACTT
>site_88
TAATAGGCAAATTGG
a	8	14	0	47	0	0	0	47	5	8
c	21	16	0	0	47	43	0	0	17	11
g	11	9	0	0	0	4	0	0	19	21
t	7	8	47	0	0	0	47	0	6	7
//
; Sites	47
>site_0
GCTACCTAGA
>site_1
AATACCTAAT
>site_2
GGTACCTAGA
>site_3
CCTACCTACC
>site_4
GGTACCTACC
>site_5
GGTACCTAGG
>site_6
ACTACCTAGG
>site_7
ACTACCTACC
>site_8
CCTACCTAGG
>site_9
AGTACCTAGG
>site_10
CATACCTAAG
>site_11
TATACCTACC
>site_12
CCTACCTACC
>site_13
CCTACCTAGG
>site_14
TTTACCTAGG
>site_15
GATACCTACC
>site_16
CCTACCTAAG
>site_17
GTTACCTAAA
>site_18
GGTACGTAAG
>site_19
CTTACGTACC
>site_20
CTTACCTACA
>site_21
CATACCTAGG
>site_22
AGTACCTACT
>site_23
CTTACCTAGG
>site_24
CTTACCTAGG
>site_25
CGTACCTATG
>site_26
GGTACGTAGG
>site_27
CCTACGTACC
>site_28
CCTACCTAGT
>site_29
CATACCTAGG
>site_30
CCTACCTACC
>site_31
TTTACCTACA
>site_32
ACTACCTACT
>site_33
TCTACCTAGA
>site_34
GCTACCTATG
>site_35
TATACCTATG
>site_36
GATACCTACC
>site_37
CCTACCTAGG
>site_38
ACTACCTAGG
>site_39
AATACCTAGT
>site_40
CATACCTAGC
>site_41
GATACCTATG
>site_42
CATACCTACA
>site_43
CATACCTACT
>site_44
CATACCTACT
>site_45
TTTACCTATG
>site_46
TGTACCTATA
a	21	11	8	10	2	1	3	3	54	59	7	11	20
c	12	15	38	6	4	1	1	0	1	0	5	21	10
g	14	13	8	4	50	56	54	53	1	0	43	11	15
t	12	20	5	39	3	1	1	3	3	0	4	16	14
//
; Sites	59
>site_0
TTCTTGGGAAGCT
>site_1
AGCAGGGGAATAT
>site_2
TGTTGGGGAAGCC
>site_3
CACTGCGGAAGAC
>site_4
ATCTGGGGAAGGC
>site_5
CTCTGGGGAATCT
>site_6
AACAGGCGAAGCG
>site_7
GCCTGGGGAAGGA
>site_8
GGAAGGGGAAGTA
>site_9
GCTCGGGGAAGGG
>site_10
CTGTGGGGTAGCA
>site_11
GTATGGGGAACCA
>site_12
GTCTGGGGAAATT
>site_13
TGCGGGGGAAGTC
>site_14
CTCTGGGGAACCA
>site_15
ACGTGGAGAAGGG
>site_16
TACTGTGGTAGTA
>site_17
CGCAGGGGAACTT
>site_18
CCACGGGGAAGCG
>site_19
GACCGAGGAAGCA
>site_20
GTCTGGGGAAAAG
>site_21
ACCTAGGTAAGTA
>site_22
ACCTAGGTAAGTA
>site_23
TAGTGGGGAACAA
>site_24
TTCTGGGGAAGCA
>site_25
GGCTGGGGAAAGG
>site_26
TTGAGGGGAAGGA
>site_27
ATCCGGGGAATTG
>site_28
CCATGGGGAAACT
>site_29
ATATTGGGAAGGA
>site_30
ACGTGGGGAAGTG
>site_31
TTCCGGTGAAGTG
>site_32
AGGTGGGGAAACA
>site_33
AGCTGGAGAAGCG
>site_34
AAATGGGGAAGCT
>site_35
GCCAGGGGAAGAT
>site_36
CTCGGGGTAAGTG
>site_37
ACTTGGGGAAAAG
>site_38
CTCACGGGAAGTA
>site_39
TCCTGGGGAAGTT
>site_40
ATCTGGGAAAGAA
>site_41
TAGTTGGGAAGAA
>site_42
GAATGGGGAAGCC
>site_43
AGCTGGGGAAAAG
>site_44
AGCTGGGGTAGCA
>site_45
CATGGGGGAAGAA
>site_46
TTCGGGGGAAGGG
>site_47
ATATGGGAAAGTC
>site_48
AACTGGGGGAGAT
>site_49
GACACGGGAAGCT
>site_50
TTGTGGGGAATTG
>site_51
CCCTGGGGCAGGT
>site_52
CGCAGGGAAAGCT
>site_53
ACTTGGGGAAGTC
>site_54
GCCACGGGAAGGC
>site_55
AGCCGGGGAAGCC
>site_56
GTCTCGGGAACGT
>site_57
ACCTGGGGAAGCC
>site_58
GGCTGGAGAAGCA
a	18	19	46	11	6	3	74	3	2	1	17	15	27	27
c	15	21	7	3	0	3	0	2	73	77	5	31	22	15
g	20	15	11	4	3	2	1	74	3	1	36	18	9	20
t	26	24	15	61	70	71	4	0	1	0	21	15	21	17
//
; Sites	79
>site_0
GCGATTAGCCTCAT
>site_1
GATATTAGCCCCTG
>site_2
TGTTTTAGCCTAAA
>site_3
GCCTTTAGCCGCCG
>site_4
TTATTTAGCCGCCA
>site_5
ATTTTTAGGCGCAA
>site_6
TGTTTTAGCCTGTT
>site_7
TAATTTAGGCAATA
>site_8
TGATTGAGCCGTGG
>site_9
CATTTTAGCCTGTG
>site_10
GCATATAGCCTAAT
>site_11
GTAGTTAGACGCTA
>site_12
CAACTTAGCCGTGT
>site_13
ATATTTAGCCTGAA
>site_14
GCCTTTAGCCTAAA
>site_15
GGGTTAAGCCGTAG
>site_16
TCATTTAGCCGGAC
>site_17
CAATATAGCCGGAA
>site_18
AAATTTACCCCGCC
>site_19
TAATTTTGCCACCC
>site_20
ACATTTAACCACTC
>site_21
TGTTTTAGCCATAA
>site_22
TGATTTAGCCTAAA
>site_23
CCATTCAGCCGCCC
>site_24
GGAATTAGCCGTAT
>site_25
TTCGTTAGCCCCCG
>site_26
GCTTTTAGCCTCAT
>site_27
TTGTTTAGCCTCTG
>site_28
TGATTTAGCGCGCC
>site_29
CAATTTTGCCGACC
>site_30
GAATGTAGCCGCCA
>site_31
TTATGTAGCCACTA
>site_32
TCCTTTAGCAGCCA
>site_33
ATATTTAACCGTTG
>site_34
TGATTTAGCCAGTT
>site_35
ACATTTAGTCGTAC
>site_36
TAGTTAAGCCGATG
>site_37
ACTTTTAGCCATTG
>site_38
ATTATTAGCCGCTG
>site_39
ACGTTTAGCCACTT
>site_40
GTATTTAGCCAGGG
>site_41
CCTTTTTGCCGCCG
>site_42
GCATTTAGCCAGCT
>site_43
TGATTTAGCCTGAT
>site_44
AAGTTCAGCCGCAA
>site_45
CCGTGTAGCCGTTA
>site_46
GGTTATAGCCCCCC
>site_47
CCATTTAGCCACTT
>site_48
TTCATTAGCCTCAA
>site_49
TTTATTAGCCGTGC
>site_50
CTCATTAGCCGCCA
>site_51
CTATATAGCCATCT
>site_52
GTATTTAGACTTAA
>site_53
GCAATTAGCCATGC
>site_54
CATTTTTGCCGCAA
>site_55
AGATTCAGCCGCCT
>site_56
TGATATAGCCGGCC
>site_57
GAAGTAAGCCGCCC
>site_58
CTATTTAGCCTGAA
>site_59
CTACTTAGCCGGCA
>site_60
CCATTTAGCCAATA
>site_61
ATATTTAGCCTGAA
>site_62
TCAATTAGCCTACG
>site_63
AATTTTAACCGCAC
>site_64
TGATTTAGCCTATT
>site_65
AAAATTAGCCAAGA
>site_66
TCGTTTAGCCGTGG
>site_67
GTATATAGCCAGAG
>site_68
ATATTTACCCGGCG
>site_69
ATATTTAGCCTAAA
>site_70
GTATTTAGGCTAAA
>site_71
GCGTTGAGCCGACG
>site_72
TACTTTAGCCTAAT
>site_73
CAATTTAGCCGCTG
>site_74
GAAATTAGCCGTTA
>site_75
TAATTTGGCCTCAT
>site_76
AGGTTTAGCCGGGG
>site_77
ATTGTTAGCCGCGC
>site_78
TTGCTTAGCCACTT
a	13	19	0	0	0	48	48	48	18	11
c	12	10	0	0	48	0	0	0	6	8
g	10	10	48	48	0	0	0	0	11	16
t	13	9	0	0	0	0	0	0	13	13
//
; Sites	48
>site_0
AAGGCAAAAA
>site_1
TTGGCAAATC
>site_2
CGGGCAAAGG
>site_3
GAGGCAAACA
>site_4
TAGGCAAATG
>site_5
AAGGCAAAGG
>site_6
TGGGCAAATT
>site_7
GTGGCAAAAC
>site_8
CAGGCAAAAC
>site_9
CCGGCAAAAA
>site_10
AAGGCAAACC
>site_11
CGGGCAAACG
>site_12
CGGGCAAATG
>site_13
GAGGCAAACT
>site_14
ATGGCAAAAA
>site_15
GTGGCAAAAT
>site_16
ATGGCAAAGG
>site_17
CAGGCAAACG
>site_18
GAGGCAAATA
>site_19
TGGGCAAAAG
>site_20
CTGGCAAAGT
>site_21
TCGGCAAAAT
>site_22
GAGGCAAAGG
>site_23
AGGGCAAAAC
>site_24
CAGGCAAATT
>site_25
TTGGCAAATT
>site_26
ACGGCAAAGC
>site_27
CAGGCAAAAG
>site_28
CGGGCAAATG
>site_29
TAGGCAAATG
>site_30
TAGGCAAAGT
>site_31
GCGGCAAAAA
>site_32
TCGGCAAAAC
>site_33
ACGGCAAAAA
>site_34
AAGGCAAAAT
>site_35
TAGGCAAATG
>site_36
AGGGCAAAAT
>site_37
ATGGCAAAAT
>site_38
CGGGCAAAGG
>site_39
GCGGCAAAAA
>site_40
AGGGCAAAGG
>site_41
ACGGCAAAGC
>site_42
TAGGCAAAAG
>site_43
GAGGCAAATA
>site_44
TCGGCAAACA
>site_45
GCGGCAAAGA
>site_46
CTGGCAAATT
>site_47
TAGGCAAATT
; Host name	rsat
; Job started	2026-03-30.165338
; Job done	2026-03-30.165338
; Seconds	0.12
;	user	0.12
;	system	0.04
;	cuser	0
;	csystem	0
