; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	21	19	13	7	47	2	1	0	4	55	59	60	10	20	17
c	11	9	5	16	7	1	10	64	4	4	1	1	6	14	19
g	16	5	6	6	0	62	54	1	1	6	0	1	5	17	18
t	18	33	42	37	12	1	1	1	57	1	6	4	45	15	12
//
; Sites	66
>site_0
TTCTAGGCTATACGA
>site_1
TATTAGGCTGAAATG
>site_2
GTCTTGGCCAAATCG
>site_3
GTTTAGGTTAACTTT
>site_4
GTTTAGGCTAAAACA
>site_5
TTTTAGCCTAAACGA
>site_6
ATGGCGGCTAAATAA
>site_7
TTTTAGGCGCAATTT
>site_8
TAACAGGCTAAAACA
>site_9
GTATTGCCTAAATTA
>site_10
CCACAGGCTAAAATG
>site_11
TATTAGGCTATATGC
>site_12
ATTCAGCCTAAAACG
>site_13
TTTTAGGCTGAATAG
>site_14
GATTAGCCTAAGTGG
>site_15
ACTTAGGCTAATCTC
>site_16
GTTCAGGCTAAATAT
>site_17
CTTTAGCCTAAAGTG
>site_18
CTTTAGGCTAAAGGC
>site_19
CACAAGGCCAAATCG
>site_20
GGTCCGGCTAAATGA
>site_21
ATTCCGGCTATATTG
>site_22
TTTATGGCTAAAACA
>site_23
ACTCAGGGTAAATTG
>site_24
CTCTTCGCTAAATGC
>site_25
GTTTAGGCTAAATCA
>site_26
ATTTAGCCTAAACCA
>site_27
TATTAGCCCAAATGC
>site_28
TATACGGCTAATTCC
>site_29
TTTTTTGCTAAATTT
>site_30
GATGAGGCTAAAAGC
>site_31
ACAGAGGCTAAACAA
>site_32
GTACAGGCTTAATGC
>site_33
CGTTAGGCTATAAAT
>site_34
TTTTTGGCTGAATGG
>site_35
CGGTCGGCAAAATTG
>site_36
GTTTAAGCTCAATCT
>site_37
ATTCAGGCTCAATAC
>site_38
GAACTGGCTAAATCA
>site_39
GGTACGACTAAATGT
>site_40
TTTTAGGCTCAAAAC
>site_41
TCCCTGGCTAAATAC
>site_42
CAGCTGGCTAAATGC
>site_43
AATCAGGCTAAATCA
>site_44
AAAAAGGCAAAATAT
>site_45
TATTAGGCTGAAGAT
>site_46
AAAGTGGCTAAATGG
>site_47
TTTAAGTCTAAATAC
>site_48
ATTTAGCCTGAATAG
>site_49
ATTCAGGCTAAATAG
>site_50
AAGTAGGCAAAAGCG
>site_51
GTATTGGCTAAATGG
>site_52
ACGTAAGCTAAACGC
>site_53
ATTTAGCCTGAATAC
>site_54
ATTCAGGCTAAATAT
>site_55
TTTTAGGCAATATTC
>site_56
ACGTAGGCTAATTGA
>site_57
AAATAGGCTAAATCA
>site_58
CCTCTGGCTATATAC
>site_59
ATTTAGGCTAAATAT
>site_60
ATTTAGCCTAAATAC
>site_61
GATTAGGCTAAAGTA
>site_62
CCAGCGGCTAAATTG
>site_63
GATGAGGCCAAATTA
>site_64
CAATAGGCTAATAAC
>site_65
TGAAAGGCTACATAT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	23	22	6	8	4	0	0	6	2	55	59	11	13	20
c	14	11	11	39	4	4	1	0	2	1	0	7	23	13
g	14	16	10	12	3	55	62	56	56	3	2	40	13	17
t	12	14	36	4	52	4	0	1	3	4	2	5	14	13
//
; Sites	63
>site_0
ATTCTTGGGAAGCT
>site_1
ATGTTGGGGAAGCC
>site_2
GATCTGGGGGATGG
>site_3
CCACTGCGGAAGAC
>site_4
AATCTGGGGAAGGC
>site_5
CGTGTGGAGAAGCC
>site_6
CCTCTGGGGAATCT
>site_7
CGCCTGGGGAAGGA
>site_8
GGGAAGGGGAAGTA
>site_9
GGCTCGGGGAAGGG
>site_10
TCTGTGGGGTAGCA
>site_11
AGTATGGGGAACCA
>site_12
GCTCTGGGTAATAA
>site_13
AGTGTGGGCAAGCA
>site_14
CGTCTGGGGAAATT
>site_15
ATGCGGGGGAAGTC
>site_16
ACTCTGGGGAACCA
>site_17
TACGTGGAGAAGGG
>site_18
TTTATGGAGAAGCT
>site_19
AATCTGGGGTAAAG
>site_20
TGTCTGGGGAAAAG
>site_21
CTAGTGGGGAACAA
>site_22
ATTCTGGGGTAACA
>site_23
TTTCTGGGGAAGCA
>site_24
GGTCTGGGCAAAAG
>site_25
GGGCTGGGGAAAGG
>site_26
TTTGAGGGGAAGGA
>site_27
CGTCTGGGGATCCG
>site_28
GATCCGGGGAATTG
>site_29
TCCATGGGGAAACT
>site_30
CATATTGGGAAGGA
>site_31
AACGTGGGGAAGTG
>site_32
GTTCCGGTGAAGTG
>site_33
GAGGTGGGGAAACA
>site_34
AAGCTGGAGAAGCG
>site_35
TAAATGGGGAAGCT
>site_36
GCTCTGGAGAACCA
>site_37
TGTCTCGGGAGGGT
>site_38
CGCCAGGGGAAGAT
>site_39
CCTCGGGGTAAGTG
>site_40
TACTTGGGGAAAAG
>site_41
CATGTGGGGATGAA
>site_42
TCTCACGGGAAGTA
>site_43
ATCCTGGGGAAGTT
>site_44
GATCTGGGAAAGAA
>site_45
ATAGTTGGGAAGAA
>site_46
AATCTGGGGGACTC
>site_47
CGAATGGGGAAGCC
>site_48
CAGCTGGGGAAAAG
>site_49
AATCTGGGGAGAGC
>site_50
AAGCTGGGGTAGCA
>site_51
GTTCGGGGGAAGGG
>site_52
AATATGGGAAAGTC
>site_53
AAACTGGGGGAGAT
>site_54
CTTGTGGGGAATTG
>site_55
ACCCTGGGGCAGGT
>site_56
AACTTGGGGAAGTC
>site_57
TAGCCGGGGAAGCC
>site_58
GGTCTCGGGAACGT
>site_59
ATTCTCGGTAAGTT
>site_60
AACCTGGGGAAGCC
>site_61
GCTGTTGGGAAGCC
>site_62
AGGCTGGAGAAGCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	18	21	40	6	5	58	2	0	4	3	53	54	31	19
c	17	15	3	0	6	2	0	49	58	5	3	2	10	17
g	15	11	1	1	3	1	59	15	0	2	8	3	4	12
t	15	18	21	58	51	4	4	1	3	55	1	6	20	17
//
; Sites	65
>site_0
CGATTAGCCTCATG
>site_1
CCATGAGGCTAATC
>site_2
ATATAAGCTTAAAT
>site_3
ATTTCAGCCTAATA
>site_4
GTATTAGGCTGAAA
>site_5
AAGTTAACCTAAAC
>site_6
GTTTTAGCCTAAAC
>site_7
CGTTTAGGCTAAAA
>site_8
ACATTAGTTTAAAA
>site_9
CCATTGGCCGAAAC
>site_10
ATATTAGGCTATAT
>site_11
CATATAGCCTAATA
>site_12
TATTCAGCCTAAAA
>site_13
ACATTTGCCTAACA
>site_14
GGATAAGCTTAAAA
>site_15
CAATCAGCCTGATT
>site_16
CACTTAGGCTAATC
>site_17
AGATTAGCCTAAGT
>site_18
TATTTAGCCTGAAC
>site_19
ATATAAGCCAAACC
>site_20
ACTTTAGGCTAAAG
>site_21
CCTTTAGCCTAAAG
>site_22
ATATAAGCCCAAGC
>site_23
GATTTAGCCTAAAC
>site_24
GGTTTAGGCTAAAT
>site_25
AGAATAGCCTAATG
>site_26
GCATTAGGCTATTC
>site_27
CGATTAACCCAATG
>site_28
GTATTAGCCCAAAT
>site_29
GAATTAGCCGTATA
>site_30
CTTTTAGCCTCATC
>site_31
TGATGAGGCTAAAA
>site_32
CAATTATCCCAATC
>site_33
TTTATAGCCTAACG
>site_34
TCATTCGCATAATA
>site_35
TTTTGAGCCTAAAA
>site_36
ACATTTGCCTATCA
>site_37
ACAGTATCCTAACC
>site_38
CAATCAGGCTAAAT
>site_39
GATTTAGCCTGATT
>site_40
CAATAAGCCTAGAG
>site_41
CTCATAGCCTAACA
>site_42
TCATTTGCCTAGCC
>site_43
TCTTCAGCCTAATA
>site_44
GTATTAGGCTGAAG
>site_45
CTATTATCCTACGG
>site_46
TCATTAGCCTCAAG
>site_47
AGCTTAGCATAACC
>site_48
TATTTAGCCTGAAT
>site_49
ATATTATCCAAACT
>site_50
TATTTAGCCTGAAT
>site_51
CAATTAGCCTACGT
>site_52
GATTTAGCCTATTT
>site_53
GAAATAGGCTAAAT
>site_54
AAATTAGCCAAGAA
>site_55
TATTTAGCCTAAAT
>site_56
TATTTAGGCTAAAT
>site_57
ACTTTAGCCTAATC
>site_58
GGATTAGGCTAAAG
>site_59
GCAATAGGCTAATA
>site_60
TTATTAGCCTATTG
>site_61
TGATCAGCATAAAC
>site_62
GTATTAGCATGAAA
>site_63
ATATTCGCCCAACT
>site_64
CAATTTGCCTATTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	26	22	26	0	3	1	5	76	76	76	11	23	27
c	13	25	32	2	2	77	3	3	4	1	9	17	19
g	17	17	3	82	79	5	1	4	0	2	4	24	21
t	30	22	25	2	2	3	77	3	6	7	62	22	19
//
; Sites	86
>site_0
CTTGGCCAAATCG
>site_1
TTAGGCTAAAACA
>site_2
GGCGGCTAAAGGC
>site_3
AATGTCTAAATGA
>site_4
GGCGGCTAAATAA
>site_5
ACAGGCTAAAACA
>site_6
TCTGGATAAATGA
>site_7
ATTGCCTAAATTA
>site_8
CACGGCTCAATCA
>site_9
ACAGGCTAAAATG
>site_10
TTAGGCTATATGC
>site_11
TTAGGCTGAATAG
>site_12
CACGGCTAAGTTG
>site_13
TCCGGCGAAACTC
>site_14
TCAGGCTAAATAT
>site_15
TTAGGCTAAAGGC
>site_16
CAAGGCCAAATCG
>site_17
TACGGCTTAACCC
>site_18
TCCGGCTAAATGA
>site_19
TCCGGCTATATTG
>site_20
GCGGGGTAAATTT
>site_21
GGTGGCAAAATTA
>site_22
AGTGGTTAAATGT
>site_23
TATGGCTAAAACA
>site_24
TCAGGGTAAATTG
>site_25
CTTCGCTAAATGC
>site_26
TTAGGCTAAATCA
>site_27
CTCGGGTAAAAGA
>site_28
GGCGGCTGAATGG
>site_29
TACGGCTAATTCC
>site_30
TTTTGCTAAATTT
>site_31
ACCGACTAAAGCA
>site_32
TGAGGCTAAAAGC
>site_33
AGAGGCTAAACAA
>site_34
GCGCGCTAAATCA
>site_35
ACAGGCTTAATGC
>site_36
TTTGGCTGAATGG
>site_37
GTCGGCAAAATTG
>site_38
TCAGGCTCAATAC
>site_39
GGCGGCTACATTC
>site_40
AGTGGCTACATAA
>site_41
AACGGTTAAATAT
>site_42
ACTGGCTAAATCA
>site_43
TACGACTAAATGT
>site_44
ATCGGCTTAACTA
>site_45
AATGGCTAAAAGT
>site_46
AGCGGCTAATAAT
>site_47
AGTGGCTAAACGT
>site_48
CCTGGCTAAATAC
>site_49
GCTGGCTAAATGC
>site_50
TCAGGCTAAATCA
>site_51
AAAGGCAAAATAT
>site_52
AACGGCTACACGG
>site_53
ATTTGCTAAATTG
>site_54
AGTGGCTAAATGG
>site_55
CACGGCTAATAAA
>site_56
GAGGGCAAAATTG
>site_57
GATGGCTATATAG
>site_58
AATGGCAAAATTG
>site_59
TAAGTCTAAATAC
>site_60
CATGGCTAATTGC
>site_61
GGCGGCTGAATCT
>site_62
GCCGGCTATATCA
>site_63
TCAGGCTAAATAG
>site_64
TACGACTATATAA
>site_65
GCCGGCTAAGTAG
>site_66
ATTGGCTAAATGG
>site_67
TCAGGCTAAATAT
>site_68
GTAGGCTAATTGA
>site_69
TGCGGTTAAAATT
>site_70
ATAGGCTAAATCA
>site_71
CTTGGCTAATTTT
>site_72
CACGGCTAAACGA
>site_73
TCTGGCTATATAC
>site_74
GCCGGGTAAATAT
>site_75
TTAGGCTAAATAT
>site_76
TTAGCCTAAATAC
>site_77
GTCGGCTCAACGC
>site_78
TTAGGCTAAAGTA
>site_79
AGCGGCTAAATTG
>site_80
AACGGCTAATTTC
>site_81
ACTGGGTAAATTG
>site_82
TGAGGCCAAATTA
>site_83
CCCGGCTAAACCT
>site_84
AAAGGCTACATAT
>site_85
CGCGGCTAACAAT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	23	9	2	0	35	0	1	1	36	3	8	5
c	6	19	28	0	0	0	1	0	1	3	9	14
g	4	4	6	0	1	37	35	0	1	8	14	7
t	5	6	2	38	2	1	1	37	0	24	7	12
//
; Sites	38
>site_0
ATCTAGGTAGCC
>site_1
ACCTAGATATAC
>site_2
CATTAGGTATTG
>site_3
ATCTAGGTACCC
>site_4
ACCTAGGTACCC
>site_5
ACCTAGGTAGTC
>site_6
ACCTAGGTAGGT
>site_7
ACCTAGGTACTG
>site_8
ACCTGGGTATCA
>site_9
GCCTAGGTGTAC
>site_10
ATCTATGTATAC
>site_11
CCTTAGGTATGA
>site_12
AGGTAGGTATAT
>site_13
ACCTAGGTAGGT
>site_14
ACCTAGGTAAAC
>site_15
AGGTAGGTATCC
>site_16
GCCTTGGTATCC
>site_17
CACTAGGAATAG
>site_18
TCCTAGGTATGT
>site_19
ACCTAGGTAAGT
>site_20
ACCTAGGTAAGT
>site_21
TACTAGGTAGGC
>site_22
TACTAGGTCTTG
>site_23
ACCTAGGTATGA
>site_24
TTCTAGTTATGG
>site_25
GTCTAGGTAGAT
>site_26
AACTAGCTATCT
>site_27
CCATAGGTATAG
>site_28
AGGTAGGTATCC
>site_29
ACCTAGGTAGGT
>site_30
ACCTAGGTAGTC
>site_31
TACTAGGTATTG
>site_32
AACTTGGTATTA
>site_33
GGCTAGGTATGC
>site_34
CCATAGGTATCA
>site_35
ATGTAGGTATGT
>site_36
CAGTAGGTATGT
>site_37
AAGTAGGTATGT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.165330_2026-03-30.165330_4VVVX9/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-03-30.165343
; Job done	2026-03-30.165345
; Seconds	0.16
;	user	0.16
;	system	0.06
;	cuser	1.29
;	csystem	0.2
