/var/www/html/rsat/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.203809_2026-03-30.203809_WvTw0s/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.203809_2026-03-30.203809_WvTw0s/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title 468BrM_3_CancerMetabolism -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.203809_2026-03-30.203809_WvTw0s/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.203809_2026-03-30.203809_WvTw0s/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/03/30/peak-motifs.2026-03-30.203809_2026-03-30.203809_WvTw0s/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	1060
	Sum of sequence lengths      	132097
	Min sequence length          	0
	Max sequence length          	837
	Average sequence length      	124
	Possible positions           	131037
 Oligonucleotide statistics:
	Total occurrences    	126833
 Position interval parameters:
	Position interval    	20
	Number of windows    	42
	Total positions      	131037
	Degrees of freedom   	41
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-21	[-419,-400]	-409.5	1	19
	2	-20	[-399,-380]	-389.5	1	20
	3	-19	[-379,-360]	-369.5	1	20
	4	-18	[-359,-340]	-349.5	3	34
	5	-17	[-339,-320]	-329.5	5	89
	6	-16	[-319,-300]	-309.5	6	110
	7	-15	[-299,-280]	-289.5	8	148
	8	-14	[-279,-260]	-269.5	12	212
	9	-13	[-259,-240]	-249.5	12	240
	10	-12	[-239,-220]	-229.5	14	262
	11	-11	[-219,-200]	-209.5	23	364
	12	-10	[-199,-180]	-189.5	31	546
	13	-9	[-179,-160]	-169.5	42	737
	14	-8	[-159,-140]	-149.5	56	986
	15	-7	[-139,-120]	-129.5	78	1338
	16	-6	[-119,-100]	-109.5	118	1914
	17	-5	[-99,-80]	-89.5	205	3120
	18	-4	[-79,-60]	-69.5	370	5733
	19	-3	[-59,-40]	-49.5	596	9775
	20	-2	[-39,-20]	-29.5	1060	19520
	21	-1	[-19,0]	-9.5	1060	21200
	22	0	[1,20]	10.5	1060	21200
	23	1	[21,40]	30.5	1060	18968
	24	2	[41,60]	50.5	575	9312
	25	3	[61,80]	70.5	358	5402
	26	4	[81,100]	90.5	193	2949
	27	5	[101,120]	110.5	111	1837
	28	6	[121,140]	130.5	76	1299
	29	7	[141,160]	150.5	55	960
	30	8	[161,180]	170.5	41	713
	31	9	[181,200]	190.5	31	531
	32	10	[201,220]	210.5	21	347
	33	11	[221,240]	230.5	14	259
	34	12	[241,260]	250.5	12	240
	35	13	[261,280]	270.5	12	206
	36	14	[281,300]	290.5	8	146
	37	15	[301,320]	310.5	6	109
	38	16	[321,340]	330.5	5	85
	39	17	[341,360]	350.5	3	30
	40	18	[361,380]	370.5	1	20
	41	19	[381,400]	390.5	1	20
	42	20	[401,420]	410.5	1	17

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-409.5         	occurrences in window	1	[-419,-400]
	11	-389.5         	occurrences in window	2	[-399,-380]
	12	-369.5         	occurrences in window	3	[-379,-360]
	13	-349.5         	occurrences in window	4	[-359,-340]
	14	-329.5         	occurrences in window	5	[-339,-320]
	15	-309.5         	occurrences in window	6	[-319,-300]
	16	-289.5         	occurrences in window	7	[-299,-280]
	17	-269.5         	occurrences in window	8	[-279,-260]
	18	-249.5         	occurrences in window	9	[-259,-240]
	19	-229.5         	occurrences in window	10	[-239,-220]
	20	-209.5         	occurrences in window	11	[-219,-200]
	21	-189.5         	occurrences in window	12	[-199,-180]
	22	-169.5         	occurrences in window	13	[-179,-160]
	23	-149.5         	occurrences in window	14	[-159,-140]
	24	-129.5         	occurrences in window	15	[-139,-120]
	25	-109.5         	occurrences in window	16	[-119,-100]
	26	-89.5          	occurrences in window	17	[-99,-80]
	27	-69.5          	occurrences in window	18	[-79,-60]
	28	-49.5          	occurrences in window	19	[-59,-40]
	29	-29.5          	occurrences in window	20	[-39,-20]
	30	-9.5           	occurrences in window	21	[-19,0]
	31	10.5           	occurrences in window	22	[1,20]
	32	30.5           	occurrences in window	23	[21,40]
	33	50.5           	occurrences in window	24	[41,60]
	34	70.5           	occurrences in window	25	[61,80]
	35	90.5           	occurrences in window	26	[81,100]
	36	110.5          	occurrences in window	27	[101,120]
	37	130.5          	occurrences in window	28	[121,140]
	38	150.5          	occurrences in window	29	[141,160]
	39	170.5          	occurrences in window	30	[161,180]
	40	190.5          	occurrences in window	31	[181,200]
	41	210.5          	occurrences in window	32	[201,220]
	42	230.5          	occurrences in window	33	[221,240]
	43	250.5          	occurrences in window	34	[241,260]
	44	270.5          	occurrences in window	35	[261,280]
	45	290.5          	occurrences in window	36	[281,300]
	46	310.5          	occurrences in window	37	[301,320]
	47	330.5          	occurrences in window	38	[321,340]
	48	350.5          	occurrences in window	39	[341,360]
	49	370.5          	occurrences in window	40	[361,380]
	50	390.5          	occurrences in window	41	[381,400]
	51	410.5          	occurrences in window	42	[401,420]
seq id occ chi2 df Pval Eval sig rank -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5
cg cg 2086 382.5 41 5.7e-57 9.1e-56 55.04 1 1 0 0 0 2 0 4 5 8 5 12 21 30 38 43 62 99 99 148 248 228 247 249 151 108 70 40 36 41 22 19 14 10 10 6 2 3 2 1 1 0 1
cc cc 7536 263.7 41 2.6e-34 4.2e-33 32.38 2 0 1 1 5 7 11 15 31 14 20 40 58 67 84 124 129 209 350 555 1045 1097 1076 1013 533 337 210 129 73 72 66 54 34 26 21 12 7 4 2 1 1 2 0
gg gg 7901 238.1 41 1.3e-29 2.1e-28 27.68 3 2 2 0 1 7 2 7 18 15 29 23 32 52 84 90 139 215 369 525 1052 1154 1193 1110 583 369 182 143 121 100 69 48 33 26 30 28 15 15 5 3 2 4 4
gc gc 6355 234.2 41 6.8e-29 1.1e-27 26.96 4 1 0 0 2 6 8 15 17 21 13 28 36 64 82 82 125 195 303 476 846 936 880 839 458 274 196 101 86 74 42 39 31 16 17 14 11 10 5 1 2 1 2
tt tt 11787 154.7 41 4.2e-15 6.7e-14 13.18 5 0 3 0 3 7 7 6 6 20 15 26 33 36 54 96 156 236 465 920 1782 1988 2096 1750 861 465 264 137 95 65 52 41 23 8 15 11 9 14 20 0 1 0 1
aa aa 11172 125.6 41 1.6e-10 2.6e-09 8.59 6 4 1 6 4 13 8 16 11 11 15 19 56 59 59 88 131 231 471 849 1775 1884 1970 1637 769 416 197 112 95 77 60 33 15 13 10 16 16 8 9 3 1 0 4
ta ta 7200 116.7 41 3.5e-09 5.5e-08 7.26 7 1 3 3 0 2 5 8 7 7 18 13 20 19 44 39 86 158 312 547 1112 1189 1266 1160 519 266 135 85 52 33 30 18 14 8 4 5 3 5 3 1 0 0 0
at at 8546 95.7 41 2.9e-06 4.6e-05 4.34 8 1 2 2 1 2 7 7 10 10 17 21 26 30 49 56 102 180 358 633 1328 1434 1437 1368 623 330 177 106 68 42 33 23 16 11 11 5 4 6 7 1 0 1 1
ga ga 7559 46.8 41 2.5e-01 4 -0.60 9 2 0 1 1 3 8 7 10 10 14 11 33 41 54 94 114 182 309 568 1135 1245 1165 1076 533 333 159 117 94 63 35 30 22 18 24 19 16 5 3 3 1 0 1
tc tc 7613 46.7 41 2.5e-01 4 -0.60 10 0 0 1 3 8 8 3 15 13 16 35 26 40 41 87 115 184 337 561 1185 1170 1201 1149 570 313 169 92 73 49 48 33 16 18 12 4 4 4 3 2 2 2 1
ag ag 9025 38.9 41 5.7e-01 9 -0.96 11 3 1 1 1 5 11 11 15 18 19 17 37 48 85 115 128 216 412 679 1355 1440 1417 1262 636 389 199 130 105 70 43 41 33 13 17 20 18 5 4 2 3 1 0
gt gt 6468 35.6 41 7.1e-01 11 -1.06 12 2 2 1 0 4 2 5 10 16 9 14 27 26 47 63 82 156 311 492 997 1043 1074 969 439 259 126 91 60 32 31 24 12 14 5 8 4 3 5 1 1 1 0
ca ca 8905 27.3 41 9.5e-01 15 -1.18 13 1 2 1 4 5 10 12 19 23 16 38 41 54 82 93 121 205 382 652 1316 1462 1383 1301 656 368 203 127 79 66 48 33 29 14 12 16 10 8 4 3 3 3 0
tg tg 9302 24.6 41 9.8e-01 16 -1.20 14 1 1 1 2 7 7 12 13 22 16 20 40 55 61 89 127 213 415 721 1402 1547 1484 1361 624 379 205 144 94 59 40 35 15 26 19 15 10 7 8 2 0 2 1
ct ct 9212 22.9 41 9.9e-01 16 -1.20 15 0 0 1 4 8 11 11 15 19 24 28 33 58 55 92 147 217 425 701 1371 1437 1453 1344 682 371 211 129 92 70 57 41 21 26 20 11 10 7 4 2 1 2 1
ac ac 6166 16.6 41 1.0e+00 16 -1.20 16 0 2 1 3 3 5 9 10 13 16 19 27 41 47 61 96 148 255 466 914 1023 982 889 442 251 116 89 56 47 37 19 19 12 13 16 7 5 1 4 1 1 0 
 Host name	rsat
 Job started	2026-03-30.203813
 Job done	2026-03-30.203814
 Seconds	0.81
	user	0.81
	system	0.03
	cuser	0.01
;	csystem	0