| Matrix name | Aligned logos | cor |
Ncor |
Aligned matrices |
|---|
| oligos_6nt_mkv3_m2_shift6 (oligos_6nt_mkv3_m2) |
 |
  |
  |
; oligos_6nt_mkv3_m2; m=0 (reference); ncol1=11; shift=6; ncol=17; ------amwCCCAGChm
; Alignment reference
a 0 0 0 0 0 0 135 92 158 7 12 3 314 4 11 116 95
c 0 0 0 0 0 0 71 97 46 342 325 339 22 5 329 94 121
g 0 0 0 0 0 0 88 82 54 5 10 7 15 346 5 53 69
t 0 0 0 0 0 0 65 88 101 5 12 10 8 4 14 96 74
|
| MA2125.1_shift7 (Zfp809) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA2125.1 (Zfp809); m=1/15; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.714751; -------wTCCCAGCc-
; cor=; Ncor=
a 0 0 0 0 0 0 0 828.0 23.0 15.0 20.0 10.0 1529.0 32.0 287.0 217.0 0
c 0 0 0 0 0 0 0 66.0 41.0 1607.0 1610.0 1621.0 26.0 35.0 1218.0 1091.0 0
g 0 0 0 0 0 0 0 81.0 23.0 18.0 14.0 16.0 73.0 1572.0 99.0 115.0 0
t 0 0 0 0 0 0 0 690.0 1578.0 25.0 21.0 18.0 37.0 26.0 61.0 242.0 0
|
| MA2341.1_shift9 (FEZF2) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA2341.1 (FEZF2); m=2/15; ncol2=8; w=0; offset=3; strand=D; shift=9; score=0.606541; ---------CCCAGCCT
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 0 17.0 5.0 4.0 231.0 6.0 8.0 7.0 14.0
c 0 0 0 0 0 0 0 0 0 202.0 206.0 258.0 15.0 8.0 224.0 247.0 10.0
g 0 0 0 0 0 0 0 0 0 10.0 9.0 0.0 14.0 251.0 28.0 2.0 8.0
t 0 0 0 0 0 0 0 0 0 36.0 45.0 3.0 5.0 0.0 5.0 9.0 233.0
|
| MA1629.2_shift9 (Zic2) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA1629.2 (Zic2); m=3/15; ncol2=9; w=0; offset=3; strand=D; shift=9; score=0.493329; ---------CaCAGCAG
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 0 1161.0 6888.0 135.0 11074.0 140.0 80.0 10625.0 192.0
c 0 0 0 0 0 0 0 0 0 9933.0 1765.0 11476.0 391.0 228.0 11272.0 118.0 133.0
g 0 0 0 0 0 0 0 0 0 585.0 829.0 188.0 186.0 11484.0 269.0 735.0 11184.0
t 0 0 0 0 0 0 0 0 0 240.0 2437.0 120.0 268.0 67.0 298.0 441.0 410.0
|
| MA1116.2_rc_shift7 (RBPJ_rc) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA1116.2_rc (RBPJ_rc); m=4/15; ncol2=6; w=0; offset=1; strand=R; shift=7; score=0.440268; -------TTCCCA----
; cor=; Ncor=
a 0 0 0 0 0 0 0 4.0 29.0 78.0 60.0 1.0 2386.0 0 0 0 0
c 0 0 0 0 0 0 0 1.0 4.0 2309.0 2313.0 2341.0 2.0 0 0 0 0
g 0 0 0 0 0 0 0 15.0 0.0 8.0 20.0 25.0 12.0 0 0 0 0
t 0 0 0 0 0 0 0 2382.0 2369.0 7.0 9.0 35.0 2.0 0 0 0 0
|
| MA1997.2_shift11 (Olig2) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA1997.2 (Olig2); m=5/15; ncol2=6; w=0; offset=5; strand=D; shift=11; score=0.436568; -----------CAGCTG
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 0 0 0 10.0 59733.0 14.0 41.0 0.0 50.0
c 0 0 0 0 0 0 0 0 0 0 0 60968.0 668.0 18.0 61069.0 741.0 114.0
g 0 0 0 0 0 0 0 0 0 0 0 114.0 741.0 61069.0 18.0 668.0 60968.0
t 0 0 0 0 0 0 0 0 0 0 0 50.0 0.0 41.0 14.0 59733.0 10.0
|
| MA0633.3_rc_shift11 (Twist2_rc) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA0633.3_rc (Twist2_rc); m=6/15; ncol2=6; w=0; offset=5; strand=R; shift=11; score=0.436209; -----------CAGCTG
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 0 0 0 15.0 48918.0 9.0 21.0 0.0 60.0
c 0 0 0 0 0 0 0 0 0 0 0 49473.0 342.0 16.0 49583.0 369.0 81.0
g 0 0 0 0 0 0 0 0 0 0 0 81.0 369.0 49583.0 16.0 345.0 49473.0
t 0 0 0 0 0 0 0 0 0 0 0 60.0 0.0 21.0 9.0 48915.0 15.0
|
| MA1993.2_shift11 (Neurod2) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA1993.2 (Neurod2); m=7/15; ncol2=6; w=0; offset=5; strand=D; shift=11; score=0.436145; -----------CAGCTG
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 0 0 0 14.0 53280.0 8.0 17.0 0.0 39.0
c 0 0 0 0 0 0 0 0 0 0 0 53913.0 310.0 15.0 53984.0 434.0 58.0
g 0 0 0 0 0 0 0 0 0 0 0 58.0 434.0 53984.0 15.0 310.0 53913.0
t 0 0 0 0 0 0 0 0 0 0 0 39.0 0.0 17.0 8.0 53280.0 14.0
|
| MA1635.2_shift11 (BHLHE22) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA1635.2 (BHLHE22); m=8/15; ncol2=6; w=0; offset=5; strand=D; shift=11; score=0.435372; -----------CAGCTG
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 0 0 0 0.0 18267.0 1.0 14.0 0.0 14.0
c 0 0 0 0 0 0 0 0 0 0 0 18331.0 37.0 53.0 18288.0 52.0 15.0
g 0 0 0 0 0 0 0 0 0 0 0 11.0 52.0 18288.0 53.0 37.0 18327.0
t 0 0 0 0 0 0 0 0 0 0 0 14.0 0.0 14.0 1.0 18267.0 0.0
|
| MA2330.1_shift9 (ZBTB24) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA2330.1 (ZBTB24); m=9/15; ncol2=10; w=0; offset=3; strand=D; shift=9; score=0.431829; ---------cCCAGGAC
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 0 65.0 58.0 28.0 667.0 25.0 49.0 629.0 41.0
c 0 0 0 0 0 0 0 0 0 534.0 662.0 750.0 53.0 35.0 67.0 70.0 705.0
g 0 0 0 0 0 0 0 0 0 127.0 47.0 24.0 62.0 738.0 677.0 57.0 49.0
t 0 0 0 0 0 0 0 0 0 102.0 61.0 26.0 46.0 30.0 35.0 72.0 33.0
|
| MA0521.3_shift11 (Tcf12) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA0521.3 (Tcf12); m=10/15; ncol2=6; w=0; offset=5; strand=D; shift=11; score=0.431104; -----------CAGCTG
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 0 0 0 367.0 72283.0 836.0 1565.0 341.0 549.0
c 0 0 0 0 0 0 0 0 0 0 0 72674.0 739.0 1814.0 69780.0 632.0 402.0
g 0 0 0 0 0 0 0 0 0 0 0 404.0 632.0 69780.0 1814.0 738.0 72670.0
t 0 0 0 0 0 0 0 0 0 0 0 550.0 341.0 1565.0 836.0 72284.0 374.0
|
| MA0056.3_shift5 (MZF1) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA0056.3 (MZF1); m=11/15; ncol2=8; w=-1; offset=-1; strand=D; shift=5; score=0.418211; -----AATCCCCA----
; cor=; Ncor=
a 0 0 0 0 0 5855.0 7149.0 106.0 100.0 135.0 111.0 117.0 6036.0 0 0 0 0
c 0 0 0 0 0 1016.0 426.0 56.0 7949.0 7939.0 7919.0 7673.0 611.0 0 0 0 0
g 0 0 0 0 0 999.0 385.0 98.0 100.0 54.0 58.0 83.0 484.0 0 0 0 0
t 0 0 0 0 0 372.0 282.0 7982.0 93.0 114.0 154.0 369.0 1111.0 0 0 0 0
|
| MA0697.3_shift11 (Zic3) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA0697.3 (Zic3); m=12/15; ncol2=7; w=0; offset=5; strand=D; shift=11; score=0.412908; -----------CAGCAG
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 0 0 0 345.0 23947.0 331.0 354.0 22980.0 393.0
c 0 0 0 0 0 0 0 0 0 0 0 25035.0 872.0 670.0 24272.0 568.0 500.0
g 0 0 0 0 0 0 0 0 0 0 0 460.0 759.0 24907.0 756.0 1768.0 24314.0
t 0 0 0 0 0 0 0 0 0 0 0 334.0 596.0 266.0 792.0 858.0 967.0
|
| MA1628.2_shift11 (Zic1::Zic2) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA1628.2 (Zic1::Zic2); m=13/15; ncol2=7; w=0; offset=5; strand=D; shift=11; score=0.412843; -----------CAGCAG
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 0 0 0 29.0 9238.0 96.0 75.0 8950.0 11.0
c 0 0 0 0 0 0 0 0 0 0 0 9594.0 384.0 195.0 9293.0 311.0 512.0
g 0 0 0 0 0 0 0 0 0 0 0 106.0 266.0 9527.0 96.0 627.0 9279.0
t 0 0 0 0 0 0 0 0 0 0 0 163.0 4.0 74.0 428.0 4.0 90.0
|
| MA0734.4_shift4 (Gli2) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA0734.4 (Gli2); m=14/15; ncol2=9; w=-2; offset=-2; strand=D; shift=4; score=0.409914; ----GACCACCCA----
; cor=; Ncor=
a 0 0 0 0 60.0 1920.0 44.0 8.0 2216.0 9.0 313.0 59.0 2101.0 0 0 0 0
c 0 0 0 0 96.0 227.0 2404.0 2464.0 40.0 2451.0 2145.0 2288.0 85.0 0 0 0 0
g 0 0 0 0 2251.0 337.0 27.0 13.0 82.0 12.0 20.0 77.0 193.0 0 0 0 0
t 0 0 0 0 85.0 8.0 17.0 7.0 154.0 20.0 14.0 68.0 113.0 0 0 0 0
|
| MA1573.2_shift0 (Thap11) |
 |
|
|
; oligos_6nt_mkv3_m2 versus MA1573.2 (Thap11); m=15/15; ncol2=14; w=-6; offset=-6; strand=D; shift=0; score=0.402665; ACTACAabTCCCAg---
; cor=; Ncor=
a 588.0 20.0 5.0 627.0 4.0 609.0 414.0 70.0 18.0 5.0 8.0 9.0 475.0 74.0 0 0 0
c 38.0 603.0 39.0 17.0 639.0 13.0 46.0 209.0 20.0 631.0 642.0 622.0 16.0 68.0 0 0 0
g 20.0 18.0 6.0 10.0 9.0 29.0 56.0 165.0 19.0 2.0 5.0 10.0 147.0 421.0 0 0 0
t 14.0 19.0 610.0 6.0 8.0 9.0 144.0 216.0 603.0 22.0 5.0 19.0 22.0 97.0 0 0 0
|