| Matrix name | Aligned logos | cor |
Ncor |
logoDP |
NsEucl |
NSW |
rcor |
rNcor |
rlogoDP |
rNsEucl |
rNSW |
rank_mean |
match_rank |
Aligned matrices |
|---|
| positions_7nt_m4_shift7 (positions_7nt_m4) |
 |
|
|
|
|
|
|
|
|
|
|
|
|
; positions_7nt_m4; m=0 (reference); ncol1=15; shift=7; ncol=22; -------wwAAAATTAAAATww
; Alignment reference
a 0 0 0 0 0 0 0 975 886 2209 2413 2408 2432 273 275 2436 2400 2412 2298 367 969 943
c 0 0 0 0 0 0 0 539 574 167 83 111 94 136 128 83 107 82 107 202 518 488
g 0 0 0 0 0 0 0 468 529 147 81 59 97 115 106 100 77 75 130 248 449 490
t 0 0 0 0 0 0 0 795 788 254 200 199 154 2253 2268 158 193 208 242 1960 841 856
|
| SOL1_MA1379.1_JASPAR_shift5 (SOL1:MA1379.1:JASPAR) |
 |
0.832 |
0.636 |
5.755 |
0.925 |
0.928 |
6 |
7 |
6 |
2 |
4 |
5.000 |
1 |
; positions_7nt_m4 versus SOL1_MA1379.1_JASPAR (SOL1:MA1379.1:JASPAR); m=1/46; ncol2=15; w=-2; offset=-2; strand=D; shift=5; score= 5; -----wTwwAAAATTYAAAw--
; cor=0.832; Ncor=0.636; logoDP=5.755; NsEucl=0.925; NSW=0.928; rcor=6; rNcor=7; rlogoDP=6; rNsEucl=2; rNSW=4; rank_mean=5.000; match_rank=1
a 0 0 0 0 0 192 95 167 219 441 543 466 484 0 0 0 482 555 599 268 0 0
c 0 0 0 0 0 17 16 37 69 54 0 3 0 0 0 169 0 45 0 16 0 0
g 0 0 0 0 0 27 6 7 46 70 43 66 23 0 0 0 118 0 1 0 0 0
t 0 0 0 0 0 364 483 389 266 35 14 65 93 600 600 431 0 0 0 316 0 0
|
| AT2G17410.DAP_M0147_AthalianaCistrome_shift4 (AT2G17410.DAP:M0147:AthalianaCistrome) |
 |
0.833 |
0.555 |
5.204 |
0.925 |
0.933 |
3 |
14 |
10 |
3 |
1 |
6.200 |
2 |
; positions_7nt_m4 versus AT2G17410.DAP_M0147_AthalianaCistrome (AT2G17410.DAP:M0147:AthalianaCistrome); m=2/46; ncol2=15; w=-3; offset=-3; strand=D; shift=4; score= 6.2; ----AAwwtrAAATYAAwW---
; cor=0.833; Ncor=0.555; logoDP=5.204; NsEucl=0.925; NSW=0.933; rcor=3; rNcor=14; rlogoDP=10; rNsEucl=3; rNSW=1; rank_mean=6.200; match_rank=2
a 0 0 0 0 319 324 256 122 100 173 362 443 445 0 0 352 424 243 122 0 0 0
c 0 0 0 0 29 41 29 26 89 72 32 3 0 0 119 0 5 0 14 0 0 0
g 0 0 0 0 49 19 6 20 30 125 0 8 0 0 0 102 25 10 8 0 0 0
t 0 0 0 0 57 70 163 286 235 84 60 0 9 454 335 0 0 201 310 0 0 0
|
| ARID3_UN0388.1_JASPAR_shift4 (ARID3:UN0388.1:JASPAR) |
 |
0.833 |
0.555 |
5.204 |
0.925 |
0.933 |
4 |
15 |
9 |
4 |
2 |
6.800 |
3 |
; positions_7nt_m4 versus ARID3_UN0388.1_JASPAR (ARID3:UN0388.1:JASPAR); m=3/46; ncol2=15; w=-3; offset=-3; strand=D; shift=4; score= 6.8; ----AAwwtrAAATYAAwW---
; cor=0.833; Ncor=0.555; logoDP=5.204; NsEucl=0.925; NSW=0.933; rcor=4; rNcor=15; rlogoDP=9; rNsEucl=4; rNSW=2; rank_mean=6.800; match_rank=3
a 0 0 0 0 703 714 564 269 220 381 797 976 980 0 0 775.33 934 535 269 0 0 0
c 0 0 0 0 63.877 90.308 63.877 57.269 196 158.59 70.485 6.608 0 0 262 0 11.013 0 30.837 0 0 0
g 0 0 0 0 107.93 41.85 13.216 44.053 66.079 275.33 0 17.621 0 0 0 224.67 55.066 22.026 17.621 0 0 0
t 0 0 0 0 126 154 359 630 518 185 132 0 19.824 1000 738 0 0 443 683 0 0 0
|
| TCX3_MA1682.1_JASPAR_shift8 (TCX3:MA1682.1:JASPAR) |
 |
0.803 |
0.750 |
5.343 |
0.925 |
0.920 |
13 |
1 |
7 |
5 |
10 |
7.200 |
4 |
; positions_7nt_m4 versus TCX3_MA1682.1_JASPAR (TCX3:MA1682.1:JASPAR); m=4/46; ncol2=14; w=0; offset=1; strand=D; shift=8; score= 7.2; --------wwAAATTCAAATww
; cor=0.803; Ncor=0.750; logoDP=5.343; NsEucl=0.925; NSW=0.920; rcor=13; rNcor=1; rlogoDP=7; rNsEucl=5; rNSW=10; rank_mean=7.200; match_rank=4
a 0 0 0 0 0 0 0 0 314 457 701 751 782 22 24 0 940 943 955 182 316 244
c 0 0 0 0 0 0 0 0 154 127 48 37 10 6 1 971 2 0 2 60 97 154
g 0 0 0 0 0 0 0 0 90 91 63 46 36 11 2 0 11 3 3 16 62 60
t 0 0 0 0 0 0 0 0 413 296 159 137 143 932 944 0 18 25 11 713 496 513
|
| TSO1_MA1161.1_JASPAR_shift4 (TSO1:MA1161.1:JASPAR) |
 |
0.832 |
0.555 |
6.071 |
0.919 |
0.922 |
5 |
16 |
2 |
9 |
8 |
8.000 |
5 |
; positions_7nt_m4 versus TSO1_MA1161.1_JASPAR (TSO1:MA1161.1:JASPAR); m=5/46; ncol2=15; w=-3; offset=-3; strand=D; shift=4; score= 8; ----wwwTwaAAATTYAAA---
; cor=0.832; Ncor=0.555; logoDP=6.071; NsEucl=0.919; NSW=0.922; rcor=5; rNcor=16; rlogoDP=2; rNsEucl=9; rNSW=8; rank_mean=8.000; match_rank=5
a 0 0 0 0 136 97 71 54 86 160 228 232 244 0 0 0 214 264 264 0 0 0
c 0 0 0 0 15 9 11 6 38 26 0 1 0 8 0 69 0 0 0 0 0 0
g 0 0 0 0 28 28 8 9 15 41 35 16 0 3 0 0 45 0 0 0 0 0
t 0 0 0 0 85 130 174 195 125 37 1 15 20 253 264 195 5 0 0 0 0 0
|
| TCX2.ampDAP_M0355_AthalianaCistrome_shift6 (TCX2.ampDAP:M0355:AthalianaCistrome) |
 |
0.806 |
0.655 |
5.882 |
0.920 |
0.917 |
12 |
5 |
5 |
8 |
11 |
8.200 |
6 |
; positions_7nt_m4 versus TCX2.ampDAP_M0355_AthalianaCistrome (TCX2.ampDAP:M0355:AthalianaCistrome); m=6/46; ncol2=14; w=-1; offset=-1; strand=D; shift=6; score= 8.2; ------TTyaAAATTyRAAw--
; cor=0.806; Ncor=0.655; logoDP=5.882; NsEucl=0.920; NSW=0.917; rcor=12; rNcor=5; rlogoDP=5; rNsEucl=8; rNSW=11; rank_mean=8.200; match_rank=6
a 0 0 0 0 0 0 118 67 73 297 534 562 476 7 0 0 413 600 600 176 0 0
c 0 0 0 0 0 0 41 43 165 121 9 13 0 0 0 287 0 0 0 79 0 0
g 0 0 0 0 0 0 21 3 43 116 41 8 28 4 0 0 187 0 0 3 0 0
t 0 0 0 0 0 0 420 487 319 66 16 17 96 589 600 313 0 0 0 342 0 0
|
| AT1G20910.DAP_M0143_AthalianaCistrome_rc_shift10 (AT1G20910.DAP:M0143:AthalianaCistrome_rc) |
 |
0.842 |
0.617 |
3.907 |
0.921 |
0.932 |
2 |
11 |
18 |
7 |
3 |
8.200 |
7 |
; positions_7nt_m4 versus AT1G20910.DAP_M0143_AthalianaCistrome_rc (AT1G20910.DAP:M0143:AthalianaCistrome_rc); m=7/46; ncol2=11; w=0; offset=3; strand=R; shift=10; score= 8.2; ----------aAATTrAwTTw-
; cor=0.842; Ncor=0.617; logoDP=3.907; NsEucl=0.921; NSW=0.932; rcor=2; rNcor=11; rlogoDP=18; rNsEucl=7; rNSW=3; rank_mean=8.200; match_rank=7
a 0 0 0 0 0 0 0 0 0 0 342 579 596 0 0 358 565 344 133 62 179 0
c 0 0 0 0 0 0 0 0 0 0 143 0 0 0 85 0 0 0 4 31 100 0
g 0 0 0 0 0 0 0 0 0 0 9 17 0 0 0 238 31 10 7 43 109 0
t 0 0 0 0 0 0 0 0 0 0 102 0 0 596 511 0 0 242 452 460 208 0
|
| TCX2_MA1162.1_JASPAR_shift5 (TCX2:MA1162.1:JASPAR) |
 |
0.807 |
0.617 |
6.096 |
0.919 |
0.915 |
10 |
10 |
1 |
11 |
12 |
8.800 |
8 |
; positions_7nt_m4 versus TCX2_MA1162.1_JASPAR (TCX2:MA1162.1:JASPAR); m=8/46; ncol2=15; w=-2; offset=-2; strand=D; shift=5; score= 8.8; -----wTTyaAAATTyRAAw--
; cor=0.807; Ncor=0.617; logoDP=6.096; NsEucl=0.919; NSW=0.915; rcor=10; rNcor=10; rlogoDP=1; rNsEucl=11; rNSW=12; rank_mean=8.800; match_rank=8
a 0 0 0 0 0 257 135 60 54 292 559 554 514 10 0 0 435 599 599 178 0 0
c 0 0 0 0 0 49 23 41 173 132 6 14 0 1 0 318 1 0 0 93 0 0
g 0 0 0 0 0 61 28 1 41 107 26 1 14 7 0 0 163 0 0 10 0 0
t 0 0 0 0 0 232 413 497 331 68 8 30 71 581 599 281 0 0 0 318 0 0
|
| AT2G20110.ampDAP_M0354_AthalianaCistrome_rc_shift6 (AT2G20110.ampDAP:M0354:AthalianaCistrome_rc) |
 |
0.809 |
0.708 |
2.221 |
0.928 |
0.927 |
9 |
2 |
29 |
1 |
6 |
9.400 |
9 |
; positions_7nt_m4 versus AT2G20110.ampDAP_M0354_AthalianaCistrome_rc (AT2G20110.ampDAP:M0354:AthalianaCistrome_rc); m=9/46; ncol2=15; w=-1; offset=-1; strand=R; shift=6; score= 9.4; ------wttmAAATTyAAAwt-
; cor=0.809; Ncor=0.708; logoDP=2.221; NsEucl=0.928; NSW=0.927; rcor=9; rNcor=2; rlogoDP=29; rNsEucl=1; rNSW=6; rank_mean=9.400; match_rank=9
a 0 0 0 0 0 0 225 144 137 218 499 484 466 0 1 0 479 600 600 169 138 0
c 0 0 0 0 0 0 32 81 110 156 16 6 0 1 0 318 0 0 0 98 116 0
g 0 0 0 0 0 0 38 0 46 82 79 18 24 1 0 0 121 0 0 9 81 0
t 0 0 0 0 0 0 305 375 307 144 6 92 110 598 599 282 0 0 0 324 265 0
|
| AT2G20110_MA1380.1_JASPAR_rc_shift5 (AT2G20110:MA1380.1:JASPAR_rc) |
 |
0.814 |
0.623 |
3.834 |
0.923 |
0.923 |
7 |
9 |
19 |
6 |
7 |
9.600 |
10 |
; positions_7nt_m4 versus AT2G20110_MA1380.1_JASPAR_rc (AT2G20110:MA1380.1:JASPAR_rc); m=10/46; ncol2=15; w=-2; offset=-2; strand=R; shift=5; score= 9.6; -----WTwaAAwATTyAAAw--
; cor=0.814; Ncor=0.623; logoDP=3.834; NsEucl=0.923; NSW=0.923; rcor=7; rNcor=9; rlogoDP=19; rNsEucl=6; rNSW=7; rank_mean=9.600; match_rank=10
a 0 0 0 0 0 157 144 237 364 463 559 336 490 0 0 0 515 512 597 328 0 0
c 0 0 0 0 0 12 20 112 49 65 0 13 0 0 0 194 0 85 0 33 0 0
g 0 0 0 0 0 19 8 16 45 18 30 96 16 0 0 0 82 0 0 0 0 0
t 0 0 0 0 0 409 425 232 139 51 8 152 91 597 597 403 0 0 0 236 0 0
|
| TCX3_MA1682.2_JASPAR_shift10 (TCX3:MA1682.2:JASPAR) |
 |
0.813 |
0.650 |
5.292 |
0.916 |
0.915 |
8 |
6 |
8 |
14 |
13 |
9.800 |
11 |
; positions_7nt_m4 versus TCX3_MA1682.2_JASPAR (TCX3:MA1682.2:JASPAR); m=11/46; ncol2=12; w=0; offset=3; strand=D; shift=10; score= 9.8; ----------AAATTCAAATww
; cor=0.813; Ncor=0.650; logoDP=5.292; NsEucl=0.916; NSW=0.915; rcor=8; rNcor=6; rlogoDP=8; rNsEucl=14; rNSW=13; rank_mean=9.800; match_rank=11
a 0 0 0 0 0 0 0 0 0 0 701 751 782 22 24 0 940 943 955 182 316 244
c 0 0 0 0 0 0 0 0 0 0 48 37 10 6 1 971 2 0 2 60 97 154
g 0 0 0 0 0 0 0 0 0 0 63 46 36 11 2 0 11 3 3 16 62 60
t 0 0 0 0 0 0 0 0 0 0 159 137 143 932 944 0 18 25 11 713 496 513
|
| ATHB-23_MA1327.3_JASPAR_shift10 (ATHB-23:MA1327.3:JASPAR) |
 |
0.888 |
0.414 |
5.901 |
0.898 |
0.928 |
1 |
42 |
4 |
31 |
5 |
16.600 |
12 |
; positions_7nt_m4 versus ATHB-23_MA1327.3_JASPAR (ATHB-23:MA1327.3:JASPAR); m=12/46; ncol2=7; w=0; offset=3; strand=D; shift=10; score= 16.6; ----------tAATTAA-----
; cor=0.888; Ncor=0.414; logoDP=5.901; NsEucl=0.898; NSW=0.928; rcor=1; rNcor=42; rlogoDP=4; rNsEucl=31; rNSW=5; rank_mean=16.600; match_rank=12
a 0 0 0 0 0 0 0 0 0 0 466 2432 2432 0 0 2432 2432 0 0 0 0 0
c 0 0 0 0 0 0 0 0 0 0 226 0 0 0 0 0 0 0 0 0 0 0
g 0 0 0 0 0 0 0 0 0 0 103 0 0 0 0 0 0 0 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 1637 0 0 2432 2432 0 0 0 0 0 0 0
|
| SOL1.ampDAP_M0356_AthalianaCistrome_rc_shift6 (SOL1.ampDAP:M0356:AthalianaCistrome_rc) |
 |
0.748 |
0.655 |
2.398 |
0.916 |
0.901 |
25 |
4 |
26 |
15 |
24 |
18.800 |
13 |
; positions_7nt_m4 versus SOL1.ampDAP_M0356_AthalianaCistrome_rc (SOL1.ampDAP:M0356:AthalianaCistrome_rc); m=13/46; ncol2=15; w=-1; offset=-1; strand=R; shift=6; score= 18.8; ------tTTvAAATTyrAAwt-
; cor=0.748; Ncor=0.655; logoDP=2.398; NsEucl=0.916; NSW=0.901; rcor=25; rNcor=4; rlogoDP=26; rNsEucl=15; rNSW=24; rank_mean=18.800; match_rank=13
a 0 0 0 0 0 0 136 93 72 192 492 530 440 1 0 0 327 600 600 190 116 0
c 0 0 0 0 0 0 53 20 70 154 13 10 0 1 0 210 2 0 0 60 116 0
g 0 0 0 0 0 0 23 6 44 179 75 27 20 0 0 0 271 0 0 1 57 0
t 0 0 0 0 0 0 388 481 414 75 20 33 140 598 600 390 0 0 0 349 311 0
|
| BBX31.DAP_M0718_AthalianaCistrome_shift8 (BBX31.DAP:M0718:AthalianaCistrome) |
 |
0.721 |
0.631 |
4.541 |
0.914 |
0.896 |
35 |
8 |
14 |
18 |
30 |
21.000 |
14 |
; positions_7nt_m4 versus BBX31.DAP_M0718_AthalianaCistrome (BBX31.DAP:M0718:AthalianaCistrome); m=14/46; ncol2=15; w=0; offset=1; strand=D; shift=8; score= 21; --------AAAAAGtaAAAaaw
; cor=0.721; Ncor=0.631; logoDP=4.541; NsEucl=0.914; NSW=0.896; rcor=35; rNcor=8; rlogoDP=14; rNsEucl=18; rNSW=30; rank_mean=21.000; match_rank=14
a 0 0 0 0 0 0 0 0 477 483 600 600 548 0 118 342 464 460 426 374 279 232
c 0 0 0 0 0 0 0 0 26 1 0 0 0 0 94 23 1 27 25 15 54 75
g 0 0 0 0 0 0 0 0 66 1 0 0 52 600 66 95 114 51 44 120 149 131
t 0 0 0 0 0 0 0 0 31 115 0 0 0 0 322 140 21 62 105 91 118 162
|
| At1g76110.DAP_M0146_AthalianaCistrome_rc_shift11 (At1g76110.DAP:M0146:AthalianaCistrome_rc) |
 |
0.772 |
0.566 |
1.627 |
0.905 |
0.901 |
19 |
12 |
37 |
22 |
22 |
22.400 |
15 |
; positions_7nt_m4 versus At1g76110.DAP_M0146_AthalianaCistrome_rc (At1g76110.DAP:M0146:AthalianaCistrome_rc); m=15/46; ncol2=11; w=0; offset=4; strand=R; shift=11; score= 22.4; -----------aATTAAWTwww
; cor=0.772; Ncor=0.566; logoDP=1.627; NsEucl=0.905; NSW=0.901; rcor=19; rNcor=12; rlogoDP=37; rNsEucl=22; rNSW=22; rank_mean=22.400; match_rank=15
a 0 0 0 0 0 0 0 0 0 0 0 236 507 0 0 507 507 351 0 159 249 171
c 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 54 69 36
g 0 0 0 0 0 0 0 0 0 0 0 65 0 0 0 0 0 0 0 76 43 51
t 0 0 0 0 0 0 0 0 0 0 0 107 0 507 507 0 0 156 507 218 146 249
|
| HMGB9_UN0401.1_JASPAR_rc_shift11 (HMGB9:UN0401.1:JASPAR_rc) |
 |
0.771 |
0.566 |
1.626 |
0.905 |
0.901 |
20 |
13 |
38 |
23 |
23 |
23.400 |
16 |
; positions_7nt_m4 versus HMGB9_UN0401.1_JASPAR_rc (HMGB9:UN0401.1:JASPAR_rc); m=16/46; ncol2=11; w=0; offset=4; strand=R; shift=11; score= 23.4; -----------aATTAAWTwww
; cor=0.771; Ncor=0.566; logoDP=1.626; NsEucl=0.905; NSW=0.901; rcor=20; rNcor=13; rlogoDP=38; rNsEucl=23; rNSW=23; rank_mean=23.400; match_rank=16
a 0 0 0 0 0 0 0 0 0 0 0 465 1000 0 0 1000 1000 692 0 314 491 337
c 0 0 0 0 0 0 0 0 0 0 0 195 0 0 0 0 0 0 0 107 136 71.006
g 0 0 0 0 0 0 0 0 0 0 0 128 0 0 0 0 0 0 0 150 84.813 101
t 0 0 0 0 0 0 0 0 0 0 0 211 0 1000 1000 0 0 308 1000 429.98 288 491
|
| TCX5_UN0411.1_JASPAR_shift11 (TCX5:UN0411.1:JASPAR) |
 |
0.757 |
0.504 |
4.560 |
0.898 |
0.896 |
21 |
19 |
13 |
32 |
33 |
23.600 |
17 |
; positions_7nt_m4 versus TCX5_UN0411.1_JASPAR (TCX5:UN0411.1:JASPAR); m=17/46; ncol2=10; w=0; offset=4; strand=D; shift=11; score= 23.6; -----------aaTTCAAAyt-
; cor=0.757; Ncor=0.504; logoDP=4.560; NsEucl=0.898; NSW=0.896; rcor=21; rNcor=19; rlogoDP=13; rNsEucl=32; rNSW=33; rank_mean=23.600; match_rank=17
a 0 0 0 0 0 0 0 0 0 0 0 324 637 0.10 0.10 0.10 906 999.71 999.71 130 228 0
c 0 0 0 0 0 0 0 0 0 0 0 225 22 0.10 0.10 776 0.10 0.10 0.10 251 228 0
g 0 0 0 0 0 0 0 0 0 0 0 225 225 0.10 0.10 0.10 94 0.10 0.10 24.842 228 0
t 0 0 0 0 0 0 0 0 0 0 0 225 115 999.71 999.71 224 0 0 0 594 316 0
|
| dof24.DAP_M0252_AthalianaCistrome_rc_shift7 (dof24.DAP:M0252:AthalianaCistrome_rc) |
 |
0.707 |
0.707 |
0.875 |
0.918 |
0.899 |
41 |
3 |
42 |
13 |
27 |
25.200 |
18 |
; positions_7nt_m4 versus dof24.DAP_M0252_AthalianaCistrome_rc (dof24.DAP:M0252:AthalianaCistrome_rc); m=18/46; ncol2=15; w=0; offset=0; strand=R; shift=7; score= 25.2; -------mAAAAAGtwAAawww
; cor=0.707; Ncor=0.707; logoDP=0.875; NsEucl=0.918; NSW=0.899; rcor=41; rNcor=3; rlogoDP=42; rNsEucl=13; rNSW=27; rank_mean=25.200; match_rank=18
a 0 0 0 0 0 0 0 156 503 460 600 600 594 0 24 262 435 413 375 328 272 221
c 0 0 0 0 0 0 0 173 26 0 0 0 0 0 82 20 16 73 28 37 59 75
g 0 0 0 0 0 0 0 148 44 0 0 0 6 600 119 135 131 19 54 79 104 139
t 0 0 0 0 0 0 0 123 27 140 0 0 0 0 375 183 18 95 143 156 165 165
|
| DOF1.7_MA1277.2_JASPAR_shift8 (DOF1.7:MA1277.2:JASPAR) |
 |
0.737 |
0.540 |
4.048 |
0.900 |
0.890 |
28 |
17 |
16 |
27 |
38 |
25.200 |
19 |
; positions_7nt_m4 versus DOF1.7_MA1277.2_JASPAR (DOF1.7:MA1277.2:JASPAR); m=19/46; ncol2=11; w=0; offset=1; strand=D; shift=8; score= 25.2; --------aAAAAGtaraa---
; cor=0.737; Ncor=0.540; logoDP=4.048; NsEucl=0.900; NSW=0.890; rcor=28; rNcor=17; rlogoDP=16; rNsEucl=27; rNSW=38; rank_mean=25.200; match_rank=19
a 0 0 0 0 0 0 0 0 388 466 595 595 575 0 96 371 342 381 326 0 0 0
c 0 0 0 0 0 0 0 0 48 0 0 0 0 0 113 18 26 52 69 0 0 0
g 0 0 0 0 0 0 0 0 108 3 0 0 20 595 94 90 177 83 66 0 0 0
t 0 0 0 0 0 0 0 0 51 126 0 0 0 0 292 116 50 79 134 0 0 0
|
| AT4G29000_M0591_1.02_CISBP_rc_shift11 (AT4G29000:M0591_1.02:CISBP_rc) |
 |
0.756 |
0.504 |
4.007 |
0.898 |
0.895 |
22 |
20 |
17 |
33 |
35 |
25.400 |
20 |
; positions_7nt_m4 versus AT4G29000_M0591_1.02_CISBP_rc (AT4G29000:M0591_1.02:CISBP_rc); m=20/46; ncol2=10; w=0; offset=4; strand=R; shift=11; score= 25.4; -----------aaTTCAAAyt-
; cor=0.756; Ncor=0.504; logoDP=4.007; NsEucl=0.898; NSW=0.895; rcor=22; rNcor=20; rlogoDP=17; rNsEucl=33; rNSW=35; rank_mean=25.400; match_rank=20
a 0 0 0 0 0 0 0 0 0 0 0 32 64 0 0 0 91 100 100 14 23 0
c 0 0 0 0 0 0 0 0 0 0 0 23 2 0 0 78 0 0 0 25 23 0
g 0 0 0 0 0 0 0 0 0 0 0 22 22 0 0 0 9 0 0 2 22 0
t 0 0 0 0 0 0 0 0 0 0 0 23 12 100 100 22 0 0 0 59 32 0
|
| ATHB23_MA1327.2_JASPAR_shift9 (ATHB23:MA1327.2:JASPAR) |
 |
0.752 |
0.501 |
5.979 |
0.890 |
0.879 |
24 |
21 |
3 |
37 |
43 |
25.600 |
21 |
; positions_7nt_m4 versus ATHB23_MA1327.2_JASPAR (ATHB23:MA1327.2:JASPAR); m=21/46; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 25.6; ---------wtAATTAAww---
; cor=0.752; Ncor=0.501; logoDP=5.979; NsEucl=0.890; NSW=0.879; rcor=24; rNcor=21; rlogoDP=3; rNsEucl=37; rNSW=43; rank_mean=25.600; match_rank=21
a 0 0 0 0 0 0 0 0 0 660 466 2432 2432 0 0 2432 2432 646 670 0 0 0
c 0 0 0 0 0 0 0 0 0 381 226 0 0 0 0 0 0 310 397 0 0 0
g 0 0 0 0 0 0 0 0 0 278 103 0 0 0 0 0 0 374 302 0 0 0
t 0 0 0 0 0 0 0 0 0 1113 1637 0 0 2432 2432 0 0 1102 1063 0 0 0
|
| AT3G04850_M0589_1.02_CISBP_rc_shift11 (AT3G04850:M0589_1.02:CISBP_rc) |
 |
0.736 |
0.491 |
1.977 |
0.902 |
0.904 |
30 |
23 |
32 |
25 |
18 |
25.600 |
22 |
; positions_7nt_m4 versus AT3G04850_M0589_1.02_CISBP_rc (AT3G04850:M0589_1.02:CISBP_rc); m=22/46; ncol2=10; w=0; offset=4; strand=R; shift=11; score= 25.6; -----------awTTyrAAwt-
; cor=0.736; Ncor=0.491; logoDP=1.977; NsEucl=0.902; NSW=0.904; rcor=30; rNcor=23; rlogoDP=32; rNsEucl=25; rNSW=18; rank_mean=25.600; match_rank=22
a 0 0 0 0 0 0 0 0 0 0 0 52 50 12 6 2 52 88 74 30 18 0
c 0 0 0 0 0 0 0 0 0 0 0 12 7 9 4 42 4 2 5 13 18 0
g 0 0 0 0 0 0 0 0 0 0 0 18 13 5 2 5 42 4 9 7 12 0
t 0 0 0 0 0 0 0 0 0 0 0 18 30 74 88 51 2 6 12 50 52 0
|
| PK22848.1_M0587_1.02_CISBP_rc_shift11 (PK22848.1:M0587_1.02:CISBP_rc) |
 |
0.738 |
0.478 |
0.876 |
0.908 |
0.906 |
27 |
26 |
41 |
20 |
15 |
25.800 |
23 |
; positions_7nt_m4 versus PK22848.1_M0587_1.02_CISBP_rc (PK22848.1:M0587_1.02:CISBP_rc); m=23/46; ncol2=13; w=0; offset=4; strand=R; shift=11; score= 25.8; -----------twttwAAATTT
; cor=0.738; Ncor=0.478; logoDP=0.876; NsEucl=0.908; NSW=0.906; rcor=27; rNcor=26; rlogoDP=41; rNsEucl=20; rNSW=15; rank_mean=25.800; match_rank=23
a 0 0 0 0 0 0 0 0 0 0 0 22 26 14 10 48 92 100 100 11 8 11
c 0 0 0 0 0 0 0 0 0 0 0 21 18 15 17 13 8 0 0 4 7 10
g 0 0 0 0 0 0 0 0 0 0 0 22 18 14 10 13 0 0 0 3 7 11
t 0 0 0 0 0 0 0 0 0 0 0 35 38 57 63 26 0 0 0 82 78 68
|
| AT5G02460_MA1281.1_JASPAR_shift0 (AT5G02460:MA1281.1:JASPAR) |
 |
0.709 |
0.451 |
1.690 |
0.919 |
0.909 |
39 |
31 |
35 |
10 |
14 |
25.800 |
24 |
; positions_7nt_m4 versus AT5G02460_MA1281.1_JASPAR (AT5G02460:MA1281.1:JASPAR); m=24/46; ncol2=21; w=-7; offset=-7; strand=D; shift=0; score= 25.8; aAAAAAGwaAAaaraaaaara-
; cor=0.709; Ncor=0.451; logoDP=1.690; NsEucl=0.919; NSW=0.909; rcor=39; rNcor=31; rlogoDP=35; rNsEucl=10; rNSW=14; rank_mean=25.800; match_rank=24
a 217 355 412 512 505 464 2 150 306 369 354 320 328 225 261 329 349 345 260 275 263 0
c 86 25 4 0 0 2 0 93 16 0 76 39 20 37 61 16 0 45 27 59 39 0
g 116 90 13 1 0 49 511 82 71 104 58 99 80 149 96 103 73 104 110 140 119 0
t 96 45 86 2 10 0 2 190 122 42 27 57 87 104 97 67 93 21 118 41 94 0
|
| AHL20_MA0933.1_JASPAR_shift11 (AHL20:MA0933.1:JASPAR) |
 |
0.791 |
0.422 |
3.126 |
0.891 |
0.905 |
15 |
39 |
23 |
36 |
16 |
25.800 |
25 |
; positions_7nt_m4 versus AHL20_MA0933.1_JASPAR (AHL20:MA0933.1:JASPAR); m=25/46; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 25.8; -----------AATWAAwT---
; cor=0.791; Ncor=0.422; logoDP=3.126; NsEucl=0.891; NSW=0.905; rcor=15; rNcor=39; rlogoDP=23; rNsEucl=36; rNSW=16; rank_mean=25.800; match_rank=25
a 0 0 0 0 0 0 0 0 0 0 0 774 753 120 250 774 843 648 54 0 0 0
c 0 0 0 0 0 0 0 0 0 0 0 66 6 4 6 4 8 12 28 0 0 0
g 0 0 0 0 0 0 0 0 0 0 0 73 5 13 6 4 1 3 18 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 88 235 862 738 218 148 337 900 0 0 0
|
| At1g76110.ampDAP_M0145_AthalianaCistrome_rc_shift11 (At1g76110.ampDAP:M0145:AthalianaCistrome_rc) |
 |
0.748 |
0.433 |
2.339 |
0.905 |
0.902 |
26 |
35 |
27 |
21 |
21 |
26.000 |
26 |
; positions_7nt_m4 versus At1g76110.ampDAP_M0145_AthalianaCistrome_rc (At1g76110.ampDAP:M0145:AthalianaCistrome_rc); m=26/46; ncol2=15; w=0; offset=4; strand=R; shift=11; score= 26; -----------aATTwAATtwt
; cor=0.748; Ncor=0.433; logoDP=2.339; NsEucl=0.905; NSW=0.902; rcor=26; rNcor=35; rlogoDP=27; rNsEucl=21; rNSW=21; rank_mean=26.000; match_rank=26
a 0 0 0 0 0 0 0 0 0 0 0 192 387 0 0 193 336 374 21 92 178 53
c 0 0 0 0 0 0 0 0 0 0 0 58 0 0 36 22 28 9 23 71 47 52
g 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0 0 23 0 10 92 30 30
t 0 0 0 0 0 0 0 0 0 0 0 95 0 387 351 172 0 4 333 132 132 252
|
| YAB5_UN0416.2_JASPAR_shift9 (YAB5:UN0416.2:JASPAR) |
 |
0.781 |
0.416 |
3.043 |
0.890 |
0.903 |
16 |
40 |
24 |
38 |
19 |
27.400 |
27 |
; positions_7nt_m4 versus YAB5_UN0416.2_JASPAR (YAB5:UN0416.2:JASPAR); m=27/46; ncol2=8; w=0; offset=2; strand=D; shift=9; score= 27.4; ---------ATaATTAw-----
; cor=0.781; Ncor=0.416; logoDP=3.043; NsEucl=0.890; NSW=0.903; rcor=16; rNcor=40; rlogoDP=24; rNsEucl=38; rNSW=19; rank_mean=27.400; match_rank=27
a 0 0 0 0 0 0 0 0 0 765 147 625 903 94 95 905 348 0 0 0 0 0
c 0 0 0 0 0 0 0 0 0 78 51 121 96 0 0 94 52 0 0 0 0 0
g 0 0 0 0 0 0 0 0 0 78 51 227 0 96 0 0 153 0 0 0 0 0
t 0 0 0 0 0 0 0 0 0 78 752 26 0 809 904 0 447 0 0 0 0 0
|
| AT5G66940.ampDAP_M0257_AthalianaCistrome_rc_shift1 (AT5G66940.ampDAP:M0257:AthalianaCistrome_rc) |
 |
0.700 |
0.500 |
1.087 |
0.919 |
0.902 |
46 |
22 |
39 |
12 |
20 |
27.800 |
28 |
; positions_7nt_m4 versus AT5G66940.ampDAP_M0257_AthalianaCistrome_rc (AT5G66940.ampDAP:M0257:AthalianaCistrome_rc); m=28/46; ncol2=21; w=-6; offset=-6; strand=R; shift=1; score= 27.8; -aaaaarsAAAAAGtaraaaaa
; cor=0.700; Ncor=0.500; logoDP=1.087; NsEucl=0.919; NSW=0.902; rcor=46; rNcor=22; rlogoDP=39; rNsEucl=12; rNSW=20; rank_mean=27.800; match_rank=28
a 0 344 315 356 377 333 231 140 416 495 600 600 596 0 42 361 370 349 290 287 270 266
c 0 56 76 65 54 59 81 170 61 0 0 0 0 0 139 15 33 88 84 70 95 108
g 0 94 116 87 109 123 183 197 70 0 0 0 3 600 80 88 151 66 81 113 103 100
t 0 106 93 92 60 85 105 93 53 105 0 0 1 0 339 136 46 97 145 130 132 126
|
| DOF5.1_MA1281.2_JASPAR_shift1 (DOF5.1:MA1281.2:JASPAR) |
 |
0.716 |
0.444 |
1.687 |
0.914 |
0.904 |
36 |
33 |
36 |
17 |
17 |
27.800 |
29 |
; positions_7nt_m4 versus DOF5.1_MA1281.2_JASPAR (DOF5.1:MA1281.2:JASPAR); m=29/46; ncol2=19; w=-6; offset=-6; strand=D; shift=1; score= 27.8; -AAAAAGwaAAaaraaaaar--
; cor=0.716; Ncor=0.444; logoDP=1.687; NsEucl=0.914; NSW=0.904; rcor=36; rNcor=33; rlogoDP=36; rNsEucl=17; rNSW=17; rank_mean=27.800; match_rank=29
a 0 355 412 512 505 464 2 150 306 369 354 320 328 225 261 329 349 345 260 275 0 0
c 0 25 4 0 0 2 0 93 16 0 76 39 20 37 61 16 0 45 27 59 0 0
g 0 90 13 1 0 49 511 82 71 104 58 99 80 149 96 103 73 104 110 140 0 0
t 0 45 86 2 10 0 2 190 122 42 27 57 87 104 97 67 93 21 118 41 0 0
|
| DOF5.8_MA1267.2_JASPAR_rc_shift8 (DOF5.8:MA1267.2:JASPAR_rc) |
 |
0.723 |
0.506 |
0.594 |
0.915 |
0.900 |
34 |
18 |
45 |
16 |
26 |
27.800 |
30 |
; positions_7nt_m4 versus DOF5.8_MA1267.2_JASPAR_rc (DOF5.8:MA1267.2:JASPAR_rc); m=30/46; ncol2=19; w=0; offset=1; strand=R; shift=8; score= 27.8; --------aAAAAGtaAAAara
; cor=0.723; Ncor=0.506; logoDP=0.594; NsEucl=0.915; NSW=0.900; rcor=34; rNcor=18; rlogoDP=45; rNsEucl=16; rNSW=26; rank_mean=27.800; match_rank=30
a 0 0 0 0 0 0 0 0 376 469 596 597 574 1 121 352 436 446 437 368 274 252
c 0 0 0 0 0 0 0 0 86 1 0 0 1 10 107 27 25 35 32 26 32 62
g 0 0 0 0 0 0 0 0 78 22 1 0 21 585 79 105 116 44 39 139 184 149
t 0 0 0 0 0 0 0 0 57 105 0 0 1 1 290 113 20 72 89 64 107 134
|
| TCX5_UN0411.2_JASPAR_shift12 (TCX5:UN0411.2:JASPAR) |
 |
0.795 |
0.424 |
4.563 |
0.886 |
0.895 |
14 |
38 |
12 |
43 |
34 |
28.200 |
31 |
; positions_7nt_m4 versus TCX5_UN0411.2_JASPAR (TCX5:UN0411.2:JASPAR); m=31/46; ncol2=8; w=0; offset=5; strand=D; shift=12; score= 28.2; ------------aTTCAAAy--
; cor=0.795; Ncor=0.424; logoDP=4.563; NsEucl=0.886; NSW=0.895; rcor=14; rNcor=38; rlogoDP=12; rNsEucl=43; rNSW=34; rank_mean=28.200; match_rank=31
a 0 0 0 0 0 0 0 0 0 0 0 0 637 0 0 0 906 1000 1000 130 0 0
c 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 776 0 0 0 251 0 0
g 0 0 0 0 0 0 0 0 0 0 0 0 225 0 0 0 94 0 0 25 0 0
t 0 0 0 0 0 0 0 0 0 0 0 0 115 1000 1000 224 0 0 0 594 0 0
|
| AHL25_AHL25_3_ArabidopsisPBM_rc_shift11 (AHL25:AHL25_3:ArabidopsisPBM_rc) |
 |
0.727 |
0.485 |
2.002 |
0.900 |
0.900 |
33 |
25 |
31 |
28 |
25 |
28.400 |
32 |
; positions_7nt_m4 versus AHL25_AHL25_3_ArabidopsisPBM_rc (AHL25:AHL25_3:ArabidopsisPBM_rc); m=32/46; ncol2=10; w=0; offset=4; strand=R; shift=11; score= 28.4; -----------wAwTwWwWtw-
; cor=0.727; Ncor=0.485; logoDP=2.002; NsEucl=0.900; NSW=0.900; rcor=33; rNcor=25; rlogoDP=31; rNsEucl=28; rNSW=25; rank_mean=28.400; match_rank=32
a 0 0 0 0 0 0 0 0 0 0 0 56 83 62 16 51 71 61 25 22 29 0
c 0 0 0 0 0 0 0 0 0 0 0 7 6 0 1 0 0 0 1 15 16 0
g 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 9 18 0
t 0 0 0 0 0 0 0 0 0 0 0 28 8 38 83 49 29 39 74 54 37 0
|
| LOC_Os02g57820_M0137_1.02_CISBP_shift7 (LOC_Os02g57820:M0137_1.02:CISBP) |
 |
0.756 |
0.403 |
0.936 |
0.900 |
0.920 |
23 |
45 |
40 |
26 |
9 |
28.600 |
33 |
; positions_7nt_m4 versus LOC_Os02g57820_M0137_1.02_CISBP (LOC_Os02g57820:M0137_1.02:CISBP); m=33/46; ncol2=8; w=0; offset=0; strand=D; shift=7; score= 28.6; -------awwwAwww-------
; cor=0.756; Ncor=0.403; logoDP=0.936; NsEucl=0.900; NSW=0.920; rcor=23; rNcor=45; rlogoDP=40; rNsEucl=26; rNSW=9; rank_mean=28.600; match_rank=33
a 0 0 0 0 0 0 0 41 38 41 44 81 51 34 31 0 0 0 0 0 0 0
c 0 0 0 0 0 0 0 18 15 4 12 0 0 8 19 0 0 0 0 0 0 0
g 0 0 0 0 0 0 0 21 19 19 5 8 7 6 15 0 0 0 0 0 0 0
t 0 0 0 0 0 0 0 20 28 36 39 11 42 52 35 0 0 0 0 0 0 0
|
| WOX13_WOX13_2_ArabidopsisPBM_rc_shift8 (WOX13:WOX13_2:ArabidopsisPBM_rc) |
 |
0.730 |
0.486 |
1.958 |
0.899 |
0.898 |
32 |
24 |
33 |
30 |
29 |
29.600 |
34 |
; positions_7nt_m4 versus WOX13_WOX13_2_ArabidopsisPBM_rc (WOX13:WOX13_2:ArabidopsisPBM_rc); m=34/46; ncol2=10; w=0; offset=1; strand=R; shift=8; score= 29.6; --------kttAATTaaa----
; cor=0.730; Ncor=0.486; logoDP=1.958; NsEucl=0.899; NSW=0.898; rcor=32; rNcor=24; rlogoDP=33; rNsEucl=30; rNSW=29; rank_mean=29.600; match_rank=34
a 0 0 0 0 0 0 0 0 18 16 20 81 81 8 11 59 57 36 0 0 0 0
c 0 0 0 0 0 0 0 0 21 15 17 5 2 9 2 4 11 19 0 0 0 0
g 0 0 0 0 0 0 0 0 34 11 4 3 9 2 6 17 15 23 0 0 0 0
t 0 0 0 0 0 0 0 0 27 58 59 11 8 81 81 20 17 22 0 0 0 0
|
| DOF1.5_MA1279.2_JASPAR_shift3 (DOF1.5:MA1279.2:JASPAR) |
 |
0.709 |
0.448 |
4.109 |
0.903 |
0.886 |
38 |
32 |
15 |
24 |
41 |
30.000 |
35 |
; positions_7nt_m4 versus DOF1.5_MA1279.2_JASPAR (DOF1.5:MA1279.2:JASPAR); m=35/46; ncol2=16; w=-4; offset=-4; strand=D; shift=3; score= 30; ---aaaarAAAAAGtraaa---
; cor=0.709; Ncor=0.448; logoDP=4.109; NsEucl=0.903; NSW=0.886; rcor=38; rNcor=32; rlogoDP=15; rNsEucl=24; rNSW=41; rank_mean=30.000; match_rank=35
a 0 0 0 329 329 301 251 184 440 486 599 599 591 0 46 232 325 400 340 0 0 0
c 0 0 0 75 55 61 73 94 34 8 1 0 0 0 35 22 122 81 71 0 0 0
g 0 0 0 121 114 143 147 199 71 1 0 1 9 600 140 273 41 38 54 0 0 0
t 0 0 0 75 102 95 129 123 55 105 0 0 0 0 379 73 112 81 135 0 0 0
|
| Medtr8g106590.1_M0145_1.02_CISBP_shift10 (Medtr8g106590.1:M0145_1.02:CISBP) |
 |
0.777 |
0.414 |
3.644 |
0.886 |
0.896 |
17 |
41 |
20 |
42 |
32 |
30.400 |
36 |
; positions_7nt_m4 versus Medtr8g106590.1_M0145_1.02_CISBP (Medtr8g106590.1:M0145_1.02:CISBP); m=36/46; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 30.4; ----------AAAWTAAT----
; cor=0.777; Ncor=0.414; logoDP=3.644; NsEucl=0.886; NSW=0.896; rcor=17; rNcor=41; rlogoDP=20; rNsEucl=42; rNSW=32; rank_mean=30.400; match_rank=36
a 0 0 0 0 0 0 0 0 0 0 84 88 83 69 17 83 76 18 0 0 0 0
c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0
g 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 4 12 17 31 83 17 21 78 0 0 0 0
|
| SOL1_M0590_1.02_CISBP_rc_shift12 (SOL1:M0590_1.02:CISBP_rc) |
 |
0.772 |
0.412 |
3.419 |
0.886 |
0.896 |
18 |
43 |
21 |
41 |
31 |
30.800 |
37 |
; positions_7nt_m4 versus SOL1_M0590_1.02_CISBP_rc (SOL1:M0590_1.02:CISBP_rc); m=37/46; ncol2=8; w=0; offset=5; strand=R; shift=12; score= 30.8; ------------wTTyAAAy--
; cor=0.772; Ncor=0.412; logoDP=3.419; NsEucl=0.886; NSW=0.896; rcor=18; rNcor=43; rlogoDP=21; rNsEucl=41; rNSW=31; rank_mean=30.800; match_rank=37
a 0 0 0 0 0 0 0 0 0 0 0 0 62 7 0 6 80 100 96 23 0 0
c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 61 2 0 0 42 0 0
g 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 15 0 2 10 0 0
t 0 0 0 0 0 0 0 0 0 0 0 0 27 93 98 33 3 0 2 25 0 0
|
| OBP3.ampDAP_M0274_AthalianaCistrome_rc_shift0 (OBP3.ampDAP:M0274:AthalianaCistrome_rc) |
 |
0.736 |
0.402 |
1.918 |
0.908 |
0.899 |
29 |
46 |
34 |
19 |
28 |
31.200 |
38 |
; positions_7nt_m4 versus OBP3.ampDAP_M0274_AthalianaCistrome_rc (OBP3.ampDAP:M0274:AthalianaCistrome_rc); m=38/46; ncol2=19; w=-7; offset=-7; strand=R; shift=0; score= 31.2; maAAAAGtwaaaraawaaa---
; cor=0.736; Ncor=0.402; logoDP=1.918; NsEucl=0.908; NSW=0.899; rcor=29; rNcor=46; rlogoDP=34; rNsEucl=19; rNSW=28; rank_mean=31.200; match_rank=38
a 162 377 440 600 599 591 0 143 293 379 346 358 290 302 311 338 303 286 282 0 0 0
c 156 65 23 0 0 0 0 115 47 18 93 68 47 82 75 23 84 59 76 0 0 0
g 138 81 44 0 1 9 600 114 78 136 77 87 152 99 99 85 93 113 119 0 0 0
t 144 77 93 0 0 0 0 228 182 67 84 87 111 117 115 154 120 142 123 0 0 0
|
| ATGRP2B_M0583_1.02_CISBP_rc_shift11 (ATGRP2B:M0583_1.02:CISBP_rc) |
 |
0.806 |
0.430 |
2.296 |
0.882 |
0.889 |
11 |
36 |
28 |
45 |
40 |
32.000 |
39 |
; positions_7nt_m4 versus ATGRP2B_M0583_1.02_CISBP_rc (ATGRP2B:M0583_1.02:CISBP_rc); m=39/46; ncol2=8; w=0; offset=4; strand=R; shift=11; score= 32; -----------AAwAAAAm---
; cor=0.806; Ncor=0.430; logoDP=2.296; NsEucl=0.882; NSW=0.889; rcor=11; rNcor=36; rlogoDP=28; rNsEucl=45; rNSW=40; rank_mean=32.000; match_rank=39
a 0 0 0 0 0 0 0 0 0 0 0 99 99 34 99 99 100 99 66 0 0 0
c 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 0 1 33 0 0 0
g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 0 0 66 0 0 0 0 1 0 0 0
|
| AHL20_AHL20_3_ArabidopsisPBM_shift11 (AHL20:AHL20_3:ArabidopsisPBM) |
 |
0.708 |
0.472 |
2.483 |
0.896 |
0.893 |
40 |
27 |
25 |
34 |
36 |
32.400 |
40 |
; positions_7nt_m4 versus AHL20_AHL20_3_ArabidopsisPBM (AHL20:AHL20_3:ArabidopsisPBM); m=40/46; ncol2=10; w=0; offset=4; strand=D; shift=11; score= 32.4; -----------tAwwWWwwTa-
; cor=0.708; Ncor=0.472; logoDP=2.483; NsEucl=0.896; NSW=0.893; rcor=40; rNcor=27; rlogoDP=25; rNsEucl=34; rNSW=36; rank_mean=32.400; match_rank=40
a 0 0 0 0 0 0 0 0 0 0 0 17 89 40 37 70 28 61 58 3 48 0
c 0 0 0 0 0 0 0 0 0 0 0 20 5 1 1 2 0 1 1 3 22 0
g 0 0 0 0 0 0 0 0 0 0 0 21 3 1 1 0 3 1 1 5 11 0
t 0 0 0 0 0 0 0 0 0 0 0 42 3 58 61 28 69 37 40 89 19 0
|
| ZHD1_MA1329.3_JASPAR_shift8 (ZHD1:MA1329.3:JASPAR) |
 |
0.730 |
0.438 |
4.913 |
0.876 |
0.862 |
31 |
34 |
11 |
46 |
46 |
33.600 |
41 |
; positions_7nt_m4 versus ZHD1_MA1329.3_JASPAR (ZHD1:MA1329.3:JASPAR); m=41/46; ncol2=9; w=0; offset=1; strand=D; shift=8; score= 33.6; --------AyTAATTAA-----
; cor=0.730; Ncor=0.438; logoDP=4.913; NsEucl=0.876; NSW=0.862; rcor=31; rNcor=34; rlogoDP=11; rNsEucl=46; rNSW=46; rank_mean=33.600; match_rank=41
a 0 0 0 0 0 0 0 0 1813 386 47 2412 2417 25 19 2382 2233 0 0 0 0 0
c 0 0 0 0 0 0 0 0 246 1155 24 14 15 29 43 14 73 0 0 0 0 0
g 0 0 0 0 0 0 0 0 193 193 9 26 18 9 12 25 60 0 0 0 0 0
t 0 0 0 0 0 0 0 0 220 738 2392 20 22 2409 2398 51 106 0 0 0 0 0
|
| AHL12_AHL12_3_ArabidopsisPBM_rc_shift11 (AHL12:AHL12_3:ArabidopsisPBM_rc) |
 |
0.700 |
0.467 |
2.188 |
0.896 |
0.892 |
45 |
30 |
30 |
35 |
37 |
35.400 |
42 |
; positions_7nt_m4 versus AHL12_AHL12_3_ArabidopsisPBM_rc (AHL12:AHL12_3:ArabidopsisPBM_rc); m=42/46; ncol2=10; w=0; offset=4; strand=R; shift=11; score= 35.4; -----------wAwwwwwwTw-
; cor=0.700; Ncor=0.467; logoDP=2.188; NsEucl=0.896; NSW=0.892; rcor=45; rNcor=30; rlogoDP=30; rNsEucl=35; rNSW=37; rank_mean=35.400; match_rank=42
a 0 0 0 0 0 0 0 0 0 0 0 52 83 45 55 35 64 43 54 10 36 0
c 0 0 0 0 0 0 0 0 0 0 0 5 2 0 1 0 1 1 1 4 11 0
g 0 0 0 0 0 0 0 0 0 0 0 18 4 1 1 1 0 1 1 2 11 0
t 0 0 0 0 0 0 0 0 0 0 0 25 11 54 43 64 35 55 44 84 42 0
|
| AHL20_AHL20_2_ArabidopsisPBM_shift10 (AHL20:AHL20_2:ArabidopsisPBM) |
 |
0.701 |
0.467 |
3.212 |
0.888 |
0.874 |
44 |
29 |
22 |
40 |
45 |
36.000 |
43 |
; positions_7nt_m4 versus AHL20_AHL20_2_ArabidopsisPBM (AHL20:AHL20_2:ArabidopsisPBM); m=43/46; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 36; ----------hAATWAAwTa--
; cor=0.701; Ncor=0.467; logoDP=3.212; NsEucl=0.888; NSW=0.874; rcor=44; rNcor=29; rlogoDP=22; rNsEucl=40; rNSW=45; rank_mean=36.000; match_rank=43
a 0 0 0 0 0 0 0 0 0 0 28 77 75 12 25 77 84 65 5 61 0 0
c 0 0 0 0 0 0 0 0 0 0 27 7 1 0 1 1 1 1 3 9 0 0
g 0 0 0 0 0 0 0 0 0 0 9 7 0 1 0 0 0 0 2 10 0 0
t 0 0 0 0 0 0 0 0 0 0 36 9 24 87 74 22 15 34 90 20 0 0
|
| EMB1789.DAP_M0345_AthalianaCistrome_rc_shift3 (EMB1789.DAP:M0345:AthalianaCistrome_rc) |
 |
0.702 |
0.406 |
0.654 |
0.900 |
0.889 |
42 |
44 |
43 |
29 |
39 |
39.400 |
44 |
; positions_7nt_m4 versus EMB1789.DAP_M0345_AthalianaCistrome_rc (EMB1789.DAP:M0345:AthalianaCistrome_rc); m=44/46; ncol2=15; w=-4; offset=-4; strand=R; shift=3; score= 39.4; ---rmrGTAAAAAawdww----
; cor=0.702; Ncor=0.406; logoDP=0.654; NsEucl=0.900; NSW=0.889; rcor=42; rNcor=44; rlogoDP=43; rNsEucl=29; rNSW=39; rank_mean=39.400; match_rank=44
a 0 0 0 144 83 86 4 12 209 265 253 227 219 115 112 107 137 148 0 0 0 0
c 0 0 0 15 119 19 0 5 0 3 0 1 21 57 25 20 20 19 0 0 0 0
g 0 0 0 75 26 150 264 0 11 0 15 0 9 36 41 67 38 23 0 0 0 0
t 0 0 0 34 40 13 0 251 48 0 0 39 19 60 90 74 73 78 0 0 0 0
|
| fgeneshCV_pg.C_scaffold_18000164_M0599_1.02_CISBP_rc_shift10 (fgeneshCV_pg.C_scaffold_18000164:M0599_1.02:CISBP_rc) |
 |
0.701 |
0.467 |
0.633 |
0.889 |
0.876 |
43 |
28 |
44 |
39 |
44 |
39.600 |
45 |
; positions_7nt_m4 versus fgeneshCV_pg.C_scaffold_18000164_M0599_1.02_CISBP_rc (fgeneshCV_pg.C_scaffold_18000164:M0599_1.02:CISBP_rc); m=45/46; ncol2=10; w=0; offset=3; strand=R; shift=10; score= 39.6; ----------wwwttyAAAh--
; cor=0.701; Ncor=0.467; logoDP=0.633; NsEucl=0.889; NSW=0.876; rcor=43; rNcor=28; rlogoDP=44; rNsEucl=39; rNSW=44; rank_mean=39.600; match_rank=45
a 0 0 0 0 0 0 0 0 0 0 33 36 38 18 20 7 70 75 75 30 0 0
c 0 0 0 0 0 0 0 0 0 0 22 19 15 16 11 45 0 5 6 26 0 0
g 0 0 0 0 0 0 0 0 0 0 19 20 22 14 13 14 24 8 10 10 0 0
t 0 0 0 0 0 0 0 0 0 0 26 25 25 52 56 34 6 12 9 34 0 0
|
| BRADI5G22430_M0121_1.02_CISBP_shift8 (BRADI5G22430:M0121_1.02:CISBP) |
 |
0.715 |
0.429 |
0.531 |
0.884 |
0.880 |
37 |
37 |
46 |
44 |
42 |
41.200 |
46 |
; positions_7nt_m4 versus BRADI5G22430_M0121_1.02_CISBP (BRADI5G22430:M0121_1.02:CISBP); m=46/46; ncol2=9; w=0; offset=1; strand=D; shift=8; score= 41.2; --------rsawwwwar-----
; cor=0.715; Ncor=0.429; logoDP=0.531; NsEucl=0.884; NSW=0.880; rcor=37; rNcor=37; rlogoDP=46; rNsEucl=44; rNSW=42; rank_mean=41.200; match_rank=46
a 0 0 0 0 0 0 0 0 37 23 61 43 48 40 34 55 46 0 0 0 0 0
c 0 0 0 0 0 0 0 0 14 28 5 11 4 10 20 7 4 0 0 0 0 0
g 0 0 0 0 0 0 0 0 38 25 23 20 21 16 12 22 32 0 0 0 0 0
t 0 0 0 0 0 0 0 0 11 24 11 26 27 34 34 16 18 0 0 0 0 0
|