| Matrix name | Aligned logos | cor |
Ncor |
logoDP |
NsEucl |
NSW |
rcor |
rNcor |
rlogoDP |
rNsEucl |
rNSW |
rank_mean |
match_rank |
Aligned matrices |
|---|
| oligos_7nt_mkv5_m3_shift8 (oligos_7nt_mkv5_m3) |
 |
|
|
|
|
|
|
|
|
|
|
|
|
; oligos_7nt_mkv5_m3; m=0 (reference); ncol1=12; shift=8; ncol=20; --------haAAACCCTAaw
; Alignment reference
a 0 0 0 0 0 0 0 0 1230 1394 2913 3558 3410 164 144 132 289 3423 1748 1379
c 0 0 0 0 0 0 0 0 941 728 147 51 93 3400 3397 3410 149 95 486 761
g 0 0 0 0 0 0 0 0 582 799 229 44 120 83 76 81 96 49 837 497
t 0 0 0 0 0 0 0 0 997 829 461 97 127 103 133 127 3216 183 679 1113
|
| TRB1_MA2032.1_JASPAR_shift9 (TRB1:MA2032.1:JASPAR) |
 |
0.989 |
0.907 |
6.852 |
0.979 |
0.995 |
2 |
1 |
4 |
1 |
1 |
1.800 |
1 |
; oligos_7nt_mkv5_m3 versus TRB1_MA2032.1_JASPAR (TRB1:MA2032.1:JASPAR); m=1/42; ncol2=11; w=0; offset=1; strand=D; shift=9; score= 1.8; ---------aaAACCCTArw
; cor=0.989; Ncor=0.907; logoDP=6.852; NsEucl=0.979; NSW=0.995; rcor=2; rNcor=1; rlogoDP=4; rNsEucl=1; rNSW=1; rank_mean=1.800; match_rank=1
a 0 0 0 0 0 0 0 0 0 1648 2956 4615 4355 138 86 71 108 4824 2829 1714
c 0 0 0 0 0 0 0 0 0 1082 451 128 40 4706 4755 4767 44 34 372 1073
g 0 0 0 0 0 0 0 0 0 1087 682 96 443 35 36 55 57 44 1303 474
t 0 0 0 0 0 0 0 0 0 1126 854 104 105 64 66 50 4734 41 439 1682
|
| TRB1_MA2032.2_JASPAR_shift10 (TRB1:MA2032.2:JASPAR) |
 |
0.990 |
0.742 |
6.850 |
0.975 |
0.994 |
1 |
6 |
5 |
2 |
2 |
3.200 |
2 |
; oligos_7nt_mkv5_m3 versus TRB1_MA2032.2_JASPAR (TRB1:MA2032.2:JASPAR); m=2/42; ncol2=9; w=0; offset=2; strand=D; shift=10; score= 3.2; ----------aAACCCTAr-
; cor=0.990; Ncor=0.742; logoDP=6.850; NsEucl=0.975; NSW=0.994; rcor=1; rNcor=6; rlogoDP=5; rNsEucl=2; rNSW=2; rank_mean=3.200; match_rank=2
a 0 0 0 0 0 0 0 0 0 0 2956 4615 4355 138 86 71 108 4824 2829 0
c 0 0 0 0 0 0 0 0 0 0 451 128 40 4706 4755 4767 44 34 372 0
g 0 0 0 0 0 0 0 0 0 0 682 96 443 35 36 55 57 44 1303 0
t 0 0 0 0 0 0 0 0 0 0 854 104 105 64 66 50 4734 41 439 0
|
| PNRC2_UN0276.1_JASPAR_shift10 (PNRC2:UN0276.1:JASPAR) |
 |
0.961 |
0.641 |
6.381 |
0.948 |
0.979 |
7 |
11 |
9 |
7 |
6 |
8.000 |
3 |
; oligos_7nt_mkv5_m3 versus PNRC2_UN0276.1_JASPAR (PNRC2:UN0276.1:JASPAR); m=3/42; ncol2=8; w=0; offset=2; strand=D; shift=10; score= 8; ----------AAWMCCTA--
; cor=0.961; Ncor=0.641; logoDP=6.381; NsEucl=0.948; NSW=0.979; rcor=7; rNcor=11; rlogoDP=9; rNsEucl=7; rNSW=6; rank_mean=8.000; match_rank=3
a 0 0 0 0 0 0 0 0 0 0 725 873 686 312 0 0 62 997 0 0
c 0 0 0 0 0 0 0 0 0 0 182 0 0 686 998 935 0 0 0 0
g 0 0 0 0 0 0 0 0 0 0 91 0 0 0 0 0 0 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 125 312 0 0 62 935 0 0 0
|
| TBP3_MA1355.1_JASPAR_shift6 (TBP3:MA1355.1:JASPAR) |
 |
0.901 |
0.721 |
6.712 |
0.942 |
0.960 |
14 |
8 |
6 |
8 |
9 |
9.000 |
4 |
; oligos_7nt_mkv5_m3 versus TBP3_MA1355.1_JASPAR (TBP3:MA1355.1:JASPAR); m=4/42; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score= 9; ------wwwtwwrCCCTAAw
; cor=0.901; Ncor=0.721; logoDP=6.712; NsEucl=0.942; NSW=0.960; rcor=14; rNcor=8; rlogoDP=6; rNsEucl=8; rNSW=9; rank_mean=9.000; match_rank=4
a 0 0 0 0 0 0 275 247 183 120 320 399 353 45 0 0 0 598 505 197
c 0 0 0 0 0 0 91 122 146 85 8 3 0 553 598 598 0 0 0 92
g 0 0 0 0 0 0 69 50 50 93 90 1 245 0 0 0 0 0 91 11
t 0 0 0 0 0 0 163 179 219 300 180 195 0 0 0 0 598 0 2 298
|
| TRB2_MA1355.2_JASPAR_shift10 (TRB2:MA1355.2:JASPAR) |
 |
0.913 |
0.702 |
6.710 |
0.935 |
0.958 |
13 |
9 |
7 |
9 |
10 |
9.600 |
5 |
; oligos_7nt_mkv5_m3 versus TRB2_MA1355.2_JASPAR (TRB2:MA1355.2:JASPAR); m=5/42; ncol2=11; w=0; offset=2; strand=D; shift=10; score= 9.6; ----------wwrCCCTAAw
; cor=0.913; Ncor=0.702; logoDP=6.710; NsEucl=0.935; NSW=0.958; rcor=13; rNcor=9; rlogoDP=7; rNsEucl=9; rNSW=10; rank_mean=9.600; match_rank=5
a 0 0 0 0 0 0 0 0 0 0 320 399 353 45 0 0 0 598 505 197
c 0 0 0 0 0 0 0 0 0 0 8 3 0 553 598 598 0 0 0 92
g 0 0 0 0 0 0 0 0 0 0 90 1 245 0 0 0 0 0 91 11
t 0 0 0 0 0 0 0 0 0 0 180 195 0 0 0 0 598 0 2 298
|
| AT1G72740_MA1353.1_JASPAR_rc_shift8 (AT1G72740:MA1353.1:JASPAR_rc) |
 |
0.973 |
0.779 |
0.479 |
0.964 |
0.984 |
5 |
3 |
38 |
4 |
5 |
11.000 |
6 |
; oligos_7nt_mkv5_m3 versus AT1G72740_MA1353.1_JASPAR_rc (AT1G72740:MA1353.1:JASPAR_rc); m=6/42; ncol2=15; w=0; offset=0; strand=R; shift=8; score= 11; --------mwAAACCCTAAw
; cor=0.973; Ncor=0.779; logoDP=0.479; NsEucl=0.964; NSW=0.984; rcor=5; rNcor=3; rlogoDP=38; rNsEucl=4; rNSW=5; rank_mean=11.000; match_rank=6
a 0 0 0 0 0 0 0 0 161 178 471 577 571 31 3 0 1 596 490 259
c 0 0 0 0 0 0 0 0 281 73 19 0 0 566 597 599 4 0 1 77
g 0 0 0 0 0 0 0 0 82 120 33 1 28 3 0 1 0 1 107 10
t 0 0 0 0 0 0 0 0 76 229 77 22 1 0 0 0 595 3 2 254
|
| AT1G72740_MA1353.2_JASPAR_rc_shift10 (AT1G72740:MA1353.2:JASPAR_rc) |
 |
0.982 |
0.756 |
0.478 |
0.963 |
0.986 |
3 |
5 |
39 |
5 |
4 |
11.200 |
7 |
; oligos_7nt_mkv5_m3 versus AT1G72740_MA1353.2_JASPAR_rc (AT1G72740:MA1353.2:JASPAR_rc); m=7/42; ncol2=11; w=0; offset=2; strand=R; shift=10; score= 11.2; ----------AAACCCTAAw
; cor=0.982; Ncor=0.756; logoDP=0.478; NsEucl=0.963; NSW=0.986; rcor=3; rNcor=5; rlogoDP=39; rNsEucl=5; rNSW=4; rank_mean=11.200; match_rank=7
a 0 0 0 0 0 0 0 0 0 0 471 577 571 31 3 0 1 596 490 259
c 0 0 0 0 0 0 0 0 0 0 19 0 0 566 597 599 4 0 1 77
g 0 0 0 0 0 0 0 0 0 0 33 1 28 3 0 1 0 1 107 10
t 0 0 0 0 0 0 0 0 0 0 77 22 1 0 0 0 595 3 2 254
|
| AL2G32420.t2_MYBRELATED_1_AT1G72740_EEAD0583_EEADannot_shift11 (AL2G32420.t2_MYBRELATED_1_AT1G72740:EEAD0583:EEADannot) |
 |
0.928 |
0.596 |
6.386 |
0.930 |
0.956 |
9 |
19 |
8 |
10 |
11 |
11.400 |
8 |
; oligos_7nt_mkv5_m3 versus AL2G32420.t2_MYBRELATED_1_AT1G72740_EEAD0583_EEADannot (AL2G32420.t2_MYBRELATED_1_AT1G72740:EEAD0583:EEADannot); m=8/42; ncol2=11; w=0; offset=3; strand=D; shift=11; score= 11.4; -----------AACCCTAAA
; cor=0.928; Ncor=0.596; logoDP=6.386; NsEucl=0.930; NSW=0.956; rcor=9; rNcor=19; rlogoDP=8; rNsEucl=10; rNSW=11; rank_mean=11.400; match_rank=8
a 0 0 0 0 0 0 0 0 0 0 0 97 96 7 2 2 5 96 95 93
c 0 0 0 0 0 0 0 0 0 0 0 1 1 81 86 96 3 0 2 4
g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 1 3 0
t 0 0 0 0 0 0 0 0 0 0 0 2 3 12 7 2 92 3 0 3
|
| MYBR101_SMH1_B73_1_m1_EEAD0453_EEADannot_shift8 (MYBR101_SMH1_B73_1_m1:EEAD0453:EEADannot) |
 |
0.857 |
0.785 |
6.236 |
0.926 |
0.939 |
29 |
2 |
10 |
14 |
19 |
14.800 |
9 |
; oligos_7nt_mkv5_m3 versus MYBR101_SMH1_B73_1_m1_EEAD0453_EEADannot (MYBR101_SMH1_B73_1_m1:EEAD0453:EEADannot); m=9/42; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 14.8; --------cywWrCCCTAr-
; cor=0.857; Ncor=0.785; logoDP=6.236; NsEucl=0.926; NSW=0.939; rcor=29; rNcor=2; rlogoDP=10; rNsEucl=14; rNSW=19; rank_mean=14.800; match_rank=9
a 0 0 0 0 0 0 0 0 9 8 26 70 65 10 0 0 0 93 61 0
c 0 0 0 0 0 0 0 0 66 54 6 2 0 90 100 100 0 2 4 0
g 0 0 0 0 0 0 0 0 10 10 13 1 35 0 0 0 0 4 34 0
t 0 0 0 0 0 0 0 0 15 28 55 27 0 0 0 0 100 1 1 0
|
| AT1G72740.ampDAP_M0588_AthalianaCistrome_rc_shift8 (AT1G72740.ampDAP:M0588:AthalianaCistrome_rc) |
 |
0.979 |
0.560 |
0.246 |
0.969 |
0.988 |
4 |
23 |
42 |
3 |
3 |
15.000 |
10 |
; oligos_7nt_mkv5_m3 versus AT1G72740.ampDAP_M0588_AthalianaCistrome_rc (AT1G72740.ampDAP:M0588:AthalianaCistrome_rc); m=10/42; ncol2=21; w=0; offset=0; strand=R; shift=8; score= 15; --------mwAAACCCTAAw
; cor=0.979; Ncor=0.560; logoDP=0.246; NsEucl=0.969; NSW=0.988; rcor=4; rNcor=23; rlogoDP=42; rNsEucl=3; rNSW=3; rank_mean=15.000; match_rank=10
a 0 0 0 0 0 0 0 0 181 161 410 562 558 37 0 1 0 592 454 216
c 0 0 0 0 0 0 0 0 233 132 13 0 0 555 592 591 0 0 3 140
g 0 0 0 0 0 0 0 0 74 146 47 2 34 0 0 0 0 0 135 24
t 0 0 0 0 0 0 0 0 104 153 122 28 0 0 0 0 592 0 0 212
|
| TBP3.ampDAP_M0621_AthalianaCistrome_rc_shift3 (TBP3.ampDAP:M0621:AthalianaCistrome_rc) |
 |
0.937 |
0.592 |
0.317 |
0.954 |
0.975 |
8 |
21 |
41 |
6 |
7 |
16.600 |
11 |
; oligos_7nt_mkv5_m3 versus TBP3.ampDAP_M0621_AthalianaCistrome_rc (TBP3.ampDAP:M0621:AthalianaCistrome_rc); m=11/42; ncol2=19; w=-5; offset=-5; strand=R; shift=3; score= 16.6; ---maamhhtaARCCCTAAw
; cor=0.937; Ncor=0.592; logoDP=0.317; NsEucl=0.954; NSW=0.975; rcor=8; rNcor=21; rlogoDP=41; rNsEucl=6; rNSW=7; rank_mean=16.600; match_rank=11
a 0 0 0 126 140 138 102 76 73 50 167 197 186 11 5 0 0 251 231 93
c 0 0 0 64 39 30 66 96 83 37 4 2 3 239 237 239 18 3 1 57
g 0 0 0 21 48 33 26 19 23 38 35 2 66 1 3 13 5 1 21 9
t 0 0 0 44 28 54 61 64 76 130 49 54 0 4 10 3 232 0 2 96
|
| 0100010593_M1389_1.02_CISBP_shift10 (0100010593:M1389_1.02:CISBP) |
 |
0.887 |
0.739 |
3.200 |
0.928 |
0.949 |
18 |
7 |
32 |
12 |
15 |
16.800 |
12 |
; oligos_7nt_mkv5_m3 versus 0100010593_M1389_1.02_CISBP (0100010593:M1389_1.02:CISBP); m=12/42; ncol2=10; w=0; offset=2; strand=D; shift=10; score= 16.8; ----------wwAMCCTarw
; cor=0.887; Ncor=0.739; logoDP=3.200; NsEucl=0.928; NSW=0.949; rcor=18; rNcor=7; rlogoDP=32; rNsEucl=12; rNSW=15; rank_mean=16.800; match_rank=12
a 0 0 0 0 0 0 0 0 0 0 39 41 78 27 5 8 2 59 34 28
c 0 0 0 0 0 0 0 0 0 0 10 6 0 69 87 85 5 11 18 24
g 0 0 0 0 0 0 0 0 0 0 20 5 15 1 3 4 1 16 27 19
t 0 0 0 0 0 0 0 0 0 0 31 48 7 3 5 3 92 14 21 29
|
| TRP2_MA1356.1_JASPAR_shift4 (TRP2:MA1356.1:JASPAR) |
 |
0.895 |
0.512 |
8.589 |
0.924 |
0.930 |
16 |
29 |
2 |
15 |
22 |
16.800 |
13 |
; oligos_7nt_mkv5_m3 versus TRP2_MA1356.1_JASPAR (TRP2:MA1356.1:JASPAR); m=13/42; ncol2=21; w=-4; offset=-4; strand=D; shift=4; score= 16.8; ----AACCcTAAACCCTAAA
; cor=0.895; Ncor=0.512; logoDP=8.589; NsEucl=0.924; NSW=0.930; rcor=16; rNcor=29; rlogoDP=2; rNsEucl=15; rNSW=22; rank_mean=16.800; match_rank=13
a 0 0 0 0 335 317 44 23 47 72 423 419 422 7 6 0 4 407 422 409
c 0 0 0 0 34 24 303 344 272 0 0 1 2 416 414 416 3 2 1 4
g 0 0 0 0 21 18 22 28 15 4 1 2 0 0 2 0 0 13 2 2
t 0 0 0 0 35 66 56 30 91 349 1 3 1 2 3 9 418 3 0 10
|
| 1200010153_M1391_1.02_CISBP_shift11 (1200010153:M1391_1.02:CISBP) |
 |
0.871 |
0.603 |
5.019 |
0.921 |
0.944 |
21 |
16 |
18 |
17 |
16 |
17.600 |
14 |
; oligos_7nt_mkv5_m3 versus 1200010153_M1391_1.02_CISBP (1200010153:M1391_1.02:CISBP); m=14/42; ncol2=10; w=0; offset=3; strand=D; shift=11; score= 17.6; -----------amCCCTAry
; cor=0.871; Ncor=0.603; logoDP=5.019; NsEucl=0.921; NSW=0.944; rcor=21; rNcor=16; rlogoDP=18; rNsEucl=17; rNSW=16; rank_mean=17.600; match_rank=14
a 0 0 0 0 0 0 0 0 0 0 0 63 29 13 1 2 0 90 28 23
c 0 0 0 0 0 0 0 0 0 0 0 5 60 87 98 98 5 1 17 25
g 0 0 0 0 0 0 0 0 0 0 0 8 3 0 1 0 0 6 42 18
t 0 0 0 0 0 0 0 0 0 0 0 24 8 0 0 0 95 3 13 34
|
| TRP2.ampDAP_M0612_AthalianaCistrome_shift3 (TRP2.ampDAP:M0612:AthalianaCistrome) |
 |
0.890 |
0.509 |
8.596 |
0.923 |
0.928 |
17 |
30 |
1 |
16 |
25 |
17.800 |
15 |
; oligos_7nt_mkv5_m3 versus TRP2.ampDAP_M0612_AthalianaCistrome (TRP2.ampDAP:M0612:AthalianaCistrome); m=15/42; ncol2=21; w=-5; offset=-5; strand=D; shift=3; score= 17.8; ---AAACCCTAAACCCTAAA
; cor=0.890; Ncor=0.509; logoDP=8.596; NsEucl=0.923; NSW=0.928; rcor=17; rNcor=30; rlogoDP=1; rNsEucl=16; rNSW=25; rank_mean=17.800; match_rank=15
a 0 0 0 90 85 87 0 9 7 12 103 104 101 2 1 0 5 99 99 97
c 0 0 0 3 2 1 85 88 75 2 0 0 3 102 103 102 0 0 0 0
g 0 0 0 2 4 1 5 5 5 1 1 0 0 0 0 0 0 4 3 2
t 0 0 0 9 13 15 14 2 17 89 0 0 0 0 0 2 99 1 2 5
|
| TRP5_MA1802.2_JASPAR_shift9 (TRP5:MA1802.2:JASPAR) |
 |
0.924 |
0.539 |
3.017 |
0.929 |
0.964 |
10 |
26 |
35 |
11 |
8 |
18.000 |
16 |
; oligos_7nt_mkv5_m3 versus TRP5_MA1802.2_JASPAR (TRP5:MA1802.2:JASPAR); m=16/42; ncol2=7; w=0; offset=1; strand=D; shift=9; score= 18; ---------wAAACCy----
; cor=0.924; Ncor=0.539; logoDP=3.017; NsEucl=0.929; NSW=0.964; rcor=10; rNcor=26; rlogoDP=35; rNsEucl=11; rNSW=8; rank_mean=18.000; match_rank=16
a 0 0 0 0 0 0 0 0 0 343 845 852 746 44 26 91 0 0 0 0
c 0 0 0 0 0 0 0 0 0 61 19 24 125 776 931 518 0 0 0 0
g 0 0 0 0 0 0 0 0 0 57 119 28 99 7 17 70 0 0 0 0
t 0 0 0 0 0 0 0 0 0 538 17 95 31 173 26 321 0 0 0 0
|
| TRP5_MA1802.1_JASPAR_shift7 (TRP5:MA1802.1:JASPAR) |
 |
0.884 |
0.612 |
3.044 |
0.927 |
0.952 |
19 |
13 |
34 |
13 |
12 |
18.200 |
17 |
; oligos_7nt_mkv5_m3 versus TRP5_MA1802.1_JASPAR (TRP5:MA1802.1:JASPAR); m=17/42; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score= 18.2; -------swwAAACCyy---
; cor=0.884; Ncor=0.612; logoDP=3.044; NsEucl=0.927; NSW=0.952; rcor=19; rNcor=13; rlogoDP=34; rNsEucl=13; rNSW=12; rank_mean=18.200; match_rank=17
a 0 0 0 0 0 0 0 190 303.26 343 845 852 745.83 44 26 91 191 0 0 0
c 0 0 0 0 0 0 0 351 239 61 19 24 125 776 931 518 334 0 0 0
g 0 0 0 0 0 0 0 281.34 109 57 119 28 99 7.35 17 70.135 109 0 0 0
t 0 0 0 0 0 0 0 178 349 538 17 95 31 173 26 321 366 0 0 0
|
| Solyc07g040920.2.1_MYBRELATED_1_AT1G72740_EEAD0654_EEADannot_shift12 (Solyc07g040920.2.1_MYBRELATED_1_AT1G72740:EEAD0654:EEADannot) |
 |
0.914 |
0.487 |
4.945 |
0.921 |
0.950 |
11 |
35 |
19 |
18 |
13 |
19.200 |
18 |
; oligos_7nt_mkv5_m3 versus Solyc07g040920.2.1_MYBRELATED_1_AT1G72740_EEAD0654_EEADannot (Solyc07g040920.2.1_MYBRELATED_1_AT1G72740:EEAD0654:EEADannot); m=18/42; ncol2=11; w=0; offset=4; strand=D; shift=12; score= 19.2; ------------ACCCTAAA
; cor=0.914; Ncor=0.487; logoDP=4.945; NsEucl=0.921; NSW=0.950; rcor=11; rNcor=35; rlogoDP=19; rNsEucl=18; rNSW=13; rank_mean=19.200; match_rank=18
a 0 0 0 0 0 0 0 0 0 0 0 0 97 8 4 3 6 96 99 92
c 0 0 0 0 0 0 0 0 0 0 0 0 1 84 86 93 6 0 0 5
g 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 1 0 1 0
t 0 0 0 0 0 0 0 0 0 0 0 0 2 7 6 4 87 4 0 3
|
| LOC_Os01g51154.1_MYBRELATED_1_AT1G72740_EEAD0624_EEADannot_shift4 (LOC_Os01g51154.1_MYBRELATED_1_AT1G72740:EEAD0624:EEADannot) |
 |
0.865 |
0.595 |
6.046 |
0.920 |
0.930 |
25 |
20 |
12 |
20 |
21 |
19.600 |
19 |
; oligos_7nt_mkv5_m3 versus LOC_Os01g51154.1_MYBRELATED_1_AT1G72740_EEAD0624_EEADannot (LOC_Os01g51154.1_MYBRELATED_1_AT1G72740:EEAD0624:EEADannot); m=19/42; ncol2=15; w=-4; offset=-4; strand=D; shift=4; score= 19.6; ----AACCCTAAACCCTAA-
; cor=0.865; Ncor=0.595; logoDP=6.046; NsEucl=0.920; NSW=0.930; rcor=25; rNcor=20; rlogoDP=12; rNsEucl=20; rNSW=21; rank_mean=19.600; match_rank=19
a 0 0 0 0 94 93 4 2 3 6 95 96 91 5 2 6 12 88 94 0
c 0 0 0 0 2 5 89 91 86 3 1 2 6 82 91 83 4 0 3 0
g 0 0 0 0 0 0 1 2 4 1 0 1 0 0 1 0 0 0 1 0
t 0 0 0 0 4 2 6 5 7 90 4 1 3 13 6 11 84 12 2 0
|
| XP_013589913.1_MYBRELATED_1_AT1G72740_EEAD0665_EEADannot_shift12 (XP_013589913.1_MYBRELATED_1_AT1G72740:EEAD0665:EEADannot) |
 |
0.913 |
0.487 |
4.856 |
0.921 |
0.949 |
12 |
36 |
20 |
19 |
14 |
20.200 |
20 |
; oligos_7nt_mkv5_m3 versus XP_013589913.1_MYBRELATED_1_AT1G72740_EEAD0665_EEADannot (XP_013589913.1_MYBRELATED_1_AT1G72740:EEAD0665:EEADannot); m=20/42; ncol2=11; w=0; offset=4; strand=D; shift=12; score= 20.2; ------------ACCCTAAA
; cor=0.913; Ncor=0.487; logoDP=4.856; NsEucl=0.921; NSW=0.949; rcor=12; rNcor=36; rlogoDP=20; rNsEucl=19; rNSW=14; rank_mean=20.200; match_rank=20
a 0 0 0 0 0 0 0 0 0 0 0 0 97 7 4 3 6 94 99 92
c 0 0 0 0 0 0 0 0 0 0 0 0 0 86 84 90 2 0 1 4
g 0 0 0 0 0 0 0 0 0 0 0 0 1 1 5 1 1 0 0 0
t 0 0 0 0 0 0 0 0 0 0 0 0 2 6 7 6 91 6 0 4
|
| TRP1_MA1352.1_JASPAR_shift5 (TRP1:MA1352.1:JASPAR) |
 |
0.881 |
0.503 |
8.450 |
0.919 |
0.921 |
20 |
33 |
3 |
22 |
27 |
21.000 |
21 |
; oligos_7nt_mkv5_m3 versus TRP1_MA1352.1_JASPAR (TRP1:MA1352.1:JASPAR); m=21/42; ncol2=21; w=-3; offset=-3; strand=D; shift=5; score= 21; -----ACCCTAAACCCTAAA
; cor=0.881; Ncor=0.503; logoDP=8.450; NsEucl=0.919; NSW=0.921; rcor=20; rNcor=33; rlogoDP=3; rNsEucl=22; rNSW=27; rank_mean=21.000; match_rank=21
a 0 0 0 0 0 253 19 17 30 29 302 304 307 4 13 1 3 296 295 306
c 0 0 0 0 0 4 250 263 218 0 0 0 0 302 290 296 2 2 9 0
g 0 0 0 0 0 8 11 14 11 3 2 1 0 0 0 6 2 2 2 0
t 0 0 0 0 0 42 27 13 48 275 3 2 0 1 4 4 300 7 1 1
|
| MYBR101_SMH1_Mo17_1_EEAD0454_EEADannot_shift6 (MYBR101_SMH1_Mo17_1:EEAD0454:EEADannot) |
 |
0.826 |
0.649 |
5.850 |
0.919 |
0.927 |
32 |
10 |
14 |
24 |
26 |
21.200 |
22 |
; oligos_7nt_mkv5_m3 versus MYBR101_SMH1_Mo17_1_EEAD0454_EEADannot (MYBR101_SMH1_Mo17_1:EEAD0454:EEADannot); m=22/42; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score= 21.2; ------mcCytwrCCCTAr-
; cor=0.826; Ncor=0.649; logoDP=5.850; NsEucl=0.919; NSW=0.927; rcor=32; rNcor=10; rlogoDP=14; rNsEucl=24; rNSW=26; rank_mean=21.200; match_rank=22
a 0 0 0 0 0 0 38 16 11 8 24 67 54 7 0 0 0 89 53 0
c 0 0 0 0 0 0 28 53 71 58 6 4 0 92 100 100 2 2 6 0
g 0 0 0 0 0 0 20 9 7 4 19 1 46 1 0 0 0 6 40 0
t 0 0 0 0 0 0 14 22 11 30 51 28 0 0 0 0 98 3 1 0
|
| LOC_Os01g51154_M1361_1.02_CISBP_shift11 (LOC_Os01g51154:M1361_1.02:CISBP) |
 |
0.863 |
0.597 |
4.111 |
0.919 |
0.941 |
27 |
17 |
25 |
21 |
17 |
21.400 |
23 |
; oligos_7nt_mkv5_m3 versus LOC_Os01g51154_M1361_1.02_CISBP (LOC_Os01g51154:M1361_1.02:CISBP); m=23/42; ncol2=10; w=0; offset=3; strand=D; shift=11; score= 21.4; -----------wrmCCTArh
; cor=0.863; Ncor=0.597; logoDP=4.111; NsEucl=0.919; NSW=0.941; rcor=27; rNcor=17; rlogoDP=25; rNsEucl=21; rNSW=17; rank_mean=21.400; match_rank=23
a 0 0 0 0 0 0 0 0 0 0 0 42 54 42 3 4 1 84 37 27
c 0 0 0 0 0 0 0 0 0 0 0 11 2 56 96 93 0 3 13 25
g 0 0 0 0 0 0 0 0 0 0 0 6 37 1 0 3 0 8 39 23
t 0 0 0 0 0 0 0 0 0 0 0 41 7 1 1 0 99 5 11 25
|
| MYB1-like_MA1030.1_JASPAR_shift11 (MYB1-like:MA1030.1:JASPAR) |
 |
0.862 |
0.597 |
4.052 |
0.919 |
0.941 |
28 |
18 |
27 |
23 |
18 |
22.800 |
24 |
; oligos_7nt_mkv5_m3 versus MYB1-like_MA1030.1_JASPAR (MYB1-like:MA1030.1:JASPAR); m=24/42; ncol2=10; w=0; offset=3; strand=D; shift=11; score= 22.8; -----------wrmCCTArh
; cor=0.862; Ncor=0.597; logoDP=4.052; NsEucl=0.919; NSW=0.941; rcor=28; rNcor=18; rlogoDP=27; rNsEucl=23; rNSW=18; rank_mean=22.800; match_rank=24
a 0 0 0 0 0 0 0 0 0 0 0 416 535 416 26 41 10 832 373 266
c 0 0 0 0 0 0 0 0 0 0 0 113 24 562 962 928 1 32 132 258
g 0 0 0 0 0 0 0 0 0 0 0 60 369 7 1 27 0 83 389 226
t 0 0 0 0 0 0 0 0 0 0 0 411 72 15 11 4 989 54 106 250
|
| estExt_fgenesh1_pg.C_Chr_13.00010057_M1396_1.02_CISBP_shift11 (estExt_fgenesh1_pg.C_Chr_13.00010057:M1396_1.02:CISBP) |
 |
0.838 |
0.628 |
3.828 |
0.913 |
0.931 |
30 |
12 |
30 |
27 |
20 |
23.800 |
25 |
; oligos_7nt_mkv5_m3 versus estExt_fgenesh1_pg.C_Chr_13.00010057_M1396_1.02_CISBP (estExt_fgenesh1_pg.C_Chr_13.00010057:M1396_1.02:CISBP); m=25/42; ncol2=9; w=0; offset=3; strand=D; shift=11; score= 23.8; -----------wrmCCTArh
; cor=0.838; Ncor=0.628; logoDP=3.828; NsEucl=0.913; NSW=0.931; rcor=30; rNcor=12; rlogoDP=30; rNsEucl=27; rNSW=20; rank_mean=23.800; match_rank=25
a 0 0 0 0 0 0 0 0 0 0 0 35 48 45 1 1 0 74 36 26
c 0 0 0 0 0 0 0 0 0 0 0 20 2 52 98 98 6 7 17 25
g 0 0 0 0 0 0 0 0 0 0 0 14 39 1 0 1 0 6 31 21
t 0 0 0 0 0 0 0 0 0 0 0 31 11 2 1 0 94 13 16 28
|
| AT1G72740_MA1353.1_JASPAR_shift7 (AT1G72740:MA1353.1:JASPAR) |
 |
0.963 |
0.770 |
8.378 |
0.958 |
0.978 |
6 |
4 |
40 |
42 |
42 |
26.800 |
26 |
; oligos_7nt_mkv5_m3 versus AT1G72740_MA1353.1_JASPAR (AT1G72740:MA1353.1:JASPAR); m=26/42; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score= 26.8; -------rrrwTTAGGGTTT
; cor=0.963; Ncor=0.770; logoDP=8.378; NsEucl=0.958; NSW=0.978; rcor=6; rNcor=4; rlogoDP=40; rNsEucl=42; rNSW=42; rank_mean=26.800; match_rank=26
a 0 0 0 0 0 0 0 187 187 278 254 2 3 595 0 0 0 1 22 77
c 0 0 0 0 0 0 0 94 71 23 10 107 1 0 1 0 3 28 1 33
g 0 0 0 0 0 0 0 223 242 230 77 1 0 4 599 597 566 0 0 19
t 0 0 0 0 0 0 0 96 100 69 259 490 596 1 0 3 31 571 577 471
|
| P0510F09.23_MA1030.2_JASPAR_shift11 (P0510F09.23:MA1030.2:JASPAR) |
 |
0.868 |
0.506 |
4.047 |
0.899 |
0.929 |
22 |
31 |
28 |
30 |
23 |
26.800 |
27 |
; oligos_7nt_mkv5_m3 versus P0510F09.23_MA1030.2_JASPAR (P0510F09.23:MA1030.2:JASPAR); m=27/42; ncol2=7; w=0; offset=3; strand=D; shift=11; score= 26.8; -----------wrmCCTA--
; cor=0.868; Ncor=0.506; logoDP=4.047; NsEucl=0.899; NSW=0.929; rcor=22; rNcor=31; rlogoDP=28; rNsEucl=30; rNSW=23; rank_mean=26.800; match_rank=27
a 0 0 0 0 0 0 0 0 0 0 0 416 535 416 26 41 10 832 0 0
c 0 0 0 0 0 0 0 0 0 0 0 113 24 562 962 928 1 32 0 0
g 0 0 0 0 0 0 0 0 0 0 0 60 369 7 1 27 0 83 0 0
t 0 0 0 0 0 0 0 0 0 0 0 411 72 15 11 4 989 54 0 0
|
| SRS7.DAP_M0745_AthalianaCistrome_shift3 (SRS7.DAP:M0745:AthalianaCistrome) |
 |
0.836 |
0.436 |
6.139 |
0.916 |
0.916 |
31 |
40 |
11 |
25 |
29 |
27.200 |
28 |
; oligos_7nt_mkv5_m3 versus SRS7.DAP_M0745_AthalianaCistrome (SRS7.DAP:M0745:AthalianaCistrome); m=28/42; ncol2=23; w=-5; offset=-5; strand=D; shift=3; score= 27.2; ---AAACCCTAAACCCTAAA
; cor=0.836; Ncor=0.436; logoDP=6.139; NsEucl=0.916; NSW=0.916; rcor=31; rNcor=40; rlogoDP=11; rNsEucl=25; rNSW=29; rank_mean=27.200; match_rank=28
a 0 0 0 24 22 25 0 0 2 0 23 21 22 1 2 0 0 24 17 23
c 0 0 0 0 0 0 22 24 23 0 0 0 0 22 21 21 0 0 0 1
g 0 0 0 0 1 0 1 1 0 0 0 1 1 1 0 1 0 0 4 0
t 0 0 0 1 2 0 2 0 0 25 2 3 2 1 2 3 25 1 4 1
|
| OsTRBF3_MA2404.1_JASPAR_shift11 (OsTRBF3:MA2404.1:JASPAR) |
 |
0.868 |
0.506 |
4.079 |
0.899 |
0.929 |
23 |
32 |
26 |
31 |
24 |
27.200 |
29 |
; oligos_7nt_mkv5_m3 versus OsTRBF3_MA2404.1_JASPAR (OsTRBF3:MA2404.1:JASPAR); m=29/42; ncol2=7; w=0; offset=3; strand=D; shift=11; score= 27.2; -----------wrmCCTA--
; cor=0.868; Ncor=0.506; logoDP=4.079; NsEucl=0.899; NSW=0.929; rcor=23; rNcor=32; rlogoDP=26; rNsEucl=31; rNSW=24; rank_mean=27.200; match_rank=29
a 0 0 0 0 0 0 0 0 0 0 0 415 534 416 25 41 10 831 0 0
c 0 0 0 0 0 0 0 0 0 0 0 113 24 562 962 928 0 31 0 0
g 0 0 0 0 0 0 0 0 0 0 0 59 369 6 1 26 0 82 0 0
t 0 0 0 0 0 0 0 0 0 0 0 411 71 14 11 3 988 53 0 0
|
| ATTRB2_M1346_1.02_CISBP_shift11 (ATTRB2:M1346_1.02:CISBP) |
 |
0.815 |
0.544 |
5.265 |
0.894 |
0.909 |
33 |
24 |
17 |
32 |
32 |
27.600 |
30 |
; oligos_7nt_mkv5_m3 versus ATTRB2_M1346_1.02_CISBP (ATTRB2:M1346_1.02:CISBP); m=30/42; ncol2=8; w=0; offset=3; strand=D; shift=11; score= 27.6; -----------wrmCCTAr-
; cor=0.815; Ncor=0.544; logoDP=5.265; NsEucl=0.894; NSW=0.909; rcor=33; rNcor=24; rlogoDP=17; rNsEucl=32; rNSW=32; rank_mean=27.600; match_rank=30
a 0 0 0 0 0 0 0 0 0 0 0 37 35 37 0 0 0 98 46 0
c 0 0 0 0 0 0 0 0 0 0 0 13 0 63 100 100 1 0 7 0
g 0 0 0 0 0 0 0 0 0 0 0 7 61 0 0 0 0 1 40 0
t 0 0 0 0 0 0 0 0 0 0 0 43 4 0 0 0 99 1 7 0
|
| TRB2_MA1073.1_JASPAR_shift11 (TRB2:MA1073.1:JASPAR) |
 |
0.814 |
0.543 |
5.283 |
0.893 |
0.909 |
34 |
25 |
16 |
33 |
33 |
28.200 |
31 |
; oligos_7nt_mkv5_m3 versus TRB2_MA1073.1_JASPAR (TRB2:MA1073.1:JASPAR); m=31/42; ncol2=8; w=0; offset=3; strand=D; shift=11; score= 28.2; -----------wrmCCTAr-
; cor=0.814; Ncor=0.543; logoDP=5.283; NsEucl=0.893; NSW=0.909; rcor=34; rNcor=25; rlogoDP=16; rNsEucl=33; rNSW=33; rank_mean=28.200; match_rank=31
a 0 0 0 0 0 0 0 0 0 0 0 368 349 372 0 0 0 980 454 0
c 0 0 0 0 0 0 0 0 0 0 0 126 0 628 1000 1000 6 0 74 0
g 0 0 0 0 0 0 0 0 0 0 0 69 611 0 0 0 0 7 398 0
t 0 0 0 0 0 0 0 0 0 0 0 437 40 0 0 0 994 13 74 0
|
| TRP2_MA1356.1_JASPAR_shift3 (TRP2:MA1356.1:JASPAR) |
 |
0.867 |
0.520 |
8.258 |
0.916 |
0.915 |
24 |
28 |
15 |
39 |
39 |
29.000 |
32 |
; oligos_7nt_mkv5_m3 versus TRP2_MA1356.1_JASPAR (TRP2:MA1356.1:JASPAR); m=32/42; ncol2=21; w=-5; offset=-5; strand=D; shift=3; score= 29; ---AACCcTAAACCCTAAAC
; cor=0.867; Ncor=0.520; logoDP=8.258; NsEucl=0.916; NSW=0.915; rcor=24; rNcor=28; rlogoDP=15; rNsEucl=39; rNSW=39; rank_mean=29.000; match_rank=32
a 0 0 0 335 317 44 23 47 72 423 419 422 7 6 0 4 407 422 409 27
c 0 0 0 34 24 303 344 272 0 0 1 2 416 414 416 3 2 1 4 350
g 0 0 0 21 18 22 28 15 4 1 2 0 0 2 0 0 13 2 2 1
t 0 0 0 35 66 56 30 91 349 1 3 1 2 3 9 418 3 0 10 47
|
| estExt_fgenesh1_pg.C_Chr_03.00010061_M1394_1.02_CISBP_shift10 (estExt_fgenesh1_pg.C_Chr_03.00010061:M1394_1.02:CISBP) |
 |
0.810 |
0.607 |
2.786 |
0.900 |
0.911 |
35 |
15 |
36 |
29 |
31 |
29.200 |
33 |
; oligos_7nt_mkv5_m3 versus estExt_fgenesh1_pg.C_Chr_03.00010061_M1394_1.02_CISBP (estExt_fgenesh1_pg.C_Chr_03.00010061:M1394_1.02:CISBP); m=33/42; ncol2=9; w=0; offset=2; strand=D; shift=10; score= 29.2; ----------wwrmCCYar-
; cor=0.810; Ncor=0.607; logoDP=2.786; NsEucl=0.900; NSW=0.911; rcor=35; rNcor=15; rlogoDP=36; rNsEucl=29; rNSW=31; rank_mean=29.200; match_rank=33
a 0 0 0 0 0 0 0 0 0 0 30 44 56 47 3 8 0 51 27 0
c 0 0 0 0 0 0 0 0 0 0 22 7 3 51 97 88 29 18 21 0
g 0 0 0 0 0 0 0 0 0 0 17 12 25 0 0 4 3 14 33 0
t 0 0 0 0 0 0 0 0 0 0 31 37 16 2 0 0 68 17 19 0
|
| TOE1_TOE1_3_ArabidopsisPBM_shift10 (TOE1:TOE1_3:ArabidopsisPBM) |
 |
0.731 |
0.609 |
4.383 |
0.890 |
0.880 |
40 |
14 |
23 |
35 |
35 |
29.400 |
34 |
; oligos_7nt_mkv5_m3 versus TOE1_TOE1_3_ArabidopsisPBM (TOE1:TOE1_3:ArabidopsisPBM); m=34/42; ncol2=10; w=0; offset=2; strand=D; shift=10; score= 29.4; ----------wAACCTTAAm
; cor=0.731; Ncor=0.609; logoDP=4.383; NsEucl=0.890; NSW=0.880; rcor=40; rNcor=14; rlogoDP=23; rNsEucl=35; rNSW=35; rank_mean=29.400; match_rank=34
a 0 0 0 0 0 0 0 0 0 0 26 74 84 1 2 4 3 95 84 41
c 0 0 0 0 0 0 0 0 0 0 14 3 2 92 83 1 3 3 1 35
g 0 0 0 0 0 0 0 0 0 0 10 2 2 3 13 1 2 1 10 7
t 0 0 0 0 0 0 0 0 0 0 50 21 12 4 2 94 92 1 5 17
|
| AT4G12670.ampDAP_M0623_AthalianaCistrome_shift0 (AT4G12670.ampDAP:M0623:AthalianaCistrome) |
 |
0.804 |
0.459 |
6.021 |
0.912 |
0.908 |
36 |
37 |
13 |
28 |
34 |
29.600 |
35 |
; oligos_7nt_mkv5_m3 versus AT4G12670.ampDAP_M0623_AthalianaCistrome (AT4G12670.ampDAP:M0623:AthalianaCistrome); m=35/42; ncol2=21; w=-8; offset=-8; strand=D; shift=0; score= 29.6; mCTAAAYCmTAMACmYKAAA
; cor=0.804; Ncor=0.459; logoDP=6.021; NsEucl=0.912; NSW=0.908; rcor=36; rNcor=37; rlogoDP=13; rNsEucl=28; rNSW=34; rank_mean=29.600; match_rank=35
a 21 0 0 45 62 61 0 1 21 0 58 43 61 0 17 0 0 61 44 61
c 40 61 0 15 0 0 43 58 40 0 0 18 0 62 42 46 0 0 15 0
g 0 1 0 0 0 1 1 1 1 0 2 1 0 0 0 0 17 0 2 1
t 1 0 62 2 0 0 18 2 0 62 2 0 1 0 3 16 45 1 1 0
|
| AT2G33550.DAP_M0787_AthalianaCistrome_shift2 (AT2G33550.DAP:M0787:AthalianaCistrome) |
 |
0.753 |
0.502 |
4.331 |
0.914 |
0.912 |
38 |
34 |
24 |
26 |
30 |
30.400 |
36 |
; oligos_7nt_mkv5_m3 versus AT2G33550.DAP_M0787_AthalianaCistrome (AT2G33550.DAP:M0787:AthalianaCistrome); m=36/42; ncol2=18; w=-6; offset=-6; strand=D; shift=2; score= 30.4; --waaaawawwwrCCCTwAa
; cor=0.753; Ncor=0.502; logoDP=4.331; NsEucl=0.914; NSW=0.912; rcor=38; rNcor=34; rlogoDP=24; rNsEucl=26; rNSW=30; rank_mean=30.400; match_rank=36
a 0 0 91 126 126 102 128 136 188 119 127 85 164 14 0 0 5 171 268 210
c 0 0 40 57 47 80 78 73 50 44 47 7 4 285 338 323 10 7 26 25
g 0 0 57 74 83 77 57 37 35 34 76 54 147 0 0 0 2 0 26 25
t 0 0 150 81 82 79 75 92 65 141 88 192 23 39 0 15 321 160 18 78
|
| TBP3_MA1355.1_JASPAR_shift4 (TBP3:MA1355.1:JASPAR) |
 |
0.898 |
0.567 |
6.701 |
0.941 |
0.959 |
15 |
22 |
37 |
41 |
40 |
31.000 |
37 |
; oligos_7nt_mkv5_m3 versus TBP3_MA1355.1_JASPAR (TBP3:MA1355.1:JASPAR); m=37/42; ncol2=15; w=-4; offset=-4; strand=D; shift=4; score= 31; ----wwwtwwrCCCTAAwt-
; cor=0.898; Ncor=0.567; logoDP=6.701; NsEucl=0.941; NSW=0.959; rcor=15; rNcor=22; rlogoDP=37; rNsEucl=41; rNSW=40; rank_mean=31.000; match_rank=37
a 0 0 0 0 275 247 183 120 320 399 353 45 0 0 0 598 505 197 92 0
c 0 0 0 0 91 122 146 85 8 3 0 553 598 598 0 0 0 92 121 0
g 0 0 0 0 69 50 50 93 90 1 245 0 0 0 0 0 91 11 28 0
t 0 0 0 0 163 179 219 300 180 195 0 0 0 0 598 0 2 298 357 0
|
| ASR3_MA1733.2_JASPAR_shift11 (ASR3:MA1733.2:JASPAR) |
 |
0.712 |
0.534 |
3.919 |
0.883 |
0.877 |
41 |
27 |
29 |
36 |
36 |
33.800 |
38 |
; oligos_7nt_mkv5_m3 versus ASR3_MA1733.2_JASPAR (ASR3:MA1733.2:JASPAR); m=38/42; ncol2=9; w=0; offset=3; strand=D; shift=11; score= 33.8; -----------TrCCCTwaa
; cor=0.712; Ncor=0.534; logoDP=3.919; NsEucl=0.883; NSW=0.877; rcor=41; rNcor=27; rlogoDP=29; rNsEucl=36; rNSW=36; rank_mean=33.800; match_rank=38
a 0 0 0 0 0 0 0 0 0 0 0 184 421 60 0 0 15 474 649 624
c 0 0 0 0 0 0 0 0 0 0 0 0 0 810 1000 895 104 28 165 78
g 0 0 0 0 0 0 0 0 0 0 0 102 579 0 0 0 10 0 32 78
t 0 0 0 0 0 0 0 0 0 0 0 715 0 130 0 105 871 497 154 219
|
| OsWRKY45_6ir8_A_3D-footprint_shift8 (OsWRKY45:6ir8_A:3D-footprint) |
 |
0.770 |
0.449 |
3.104 |
0.892 |
0.918 |
37 |
39 |
33 |
34 |
28 |
34.200 |
39 |
; oligos_7nt_mkv5_m3 versus OsWRKY45_6ir8_A_3D-footprint (OsWRKY45:6ir8_A:3D-footprint); m=39/42; ncol2=7; w=0; offset=0; strand=D; shift=8; score= 34.2; --------tnnnACC-----
; cor=0.770; Ncor=0.449; logoDP=3.104; NsEucl=0.892; NSW=0.918; rcor=37; rNcor=39; rlogoDP=33; rNsEucl=34; rNSW=28; rank_mean=34.200; match_rank=39
a 0 0 0 0 0 0 0 0 19 24 24 24 96 0 0 0 0 0 0 0
c 0 0 0 0 0 0 0 0 19 24 24 24 0 96 77 0 0 0 0 0
g 0 0 0 0 0 0 0 0 19 24 24 24 0 0 0 0 0 0 0 0
t 0 0 0 0 0 0 0 0 39 24 24 24 0 0 19 0 0 0 0 0
|
| STY1_STY1_ArabidopsisPBM_rc_shift12 (STY1:STY1:ArabidopsisPBM_rc) |
 |
0.751 |
0.429 |
4.442 |
0.875 |
0.875 |
39 |
41 |
22 |
37 |
37 |
35.200 |
40 |
; oligos_7nt_mkv5_m3 versus STY1_STY1_ArabidopsisPBM_rc (STY1:STY1:ArabidopsisPBM_rc); m=40/42; ncol2=10; w=0; offset=4; strand=R; shift=12; score= 35.2; ------------rCCCTAGG
; cor=0.751; Ncor=0.429; logoDP=4.442; NsEucl=0.875; NSW=0.875; rcor=39; rNcor=41; rlogoDP=22; rNsEucl=37; rNSW=37; rank_mean=35.200; match_rank=40
a 0 0 0 0 0 0 0 0 0 0 0 0 39 6 5 1 1 97 1 3
c 0 0 0 0 0 0 0 0 0 0 0 0 24 86 91 95 1 1 3 1
g 0 0 0 0 0 0 0 0 0 0 0 0 27 6 1 3 1 1 95 91
t 0 0 0 0 0 0 0 0 0 0 0 0 10 2 3 1 97 1 1 5
|
| TRP1_MA1352.1_JASPAR_shift3 (TRP1:MA1352.1:JASPAR) |
 |
0.863 |
0.450 |
8.129 |
0.916 |
0.915 |
26 |
38 |
31 |
40 |
41 |
35.200 |
41 |
; oligos_7nt_mkv5_m3 versus TRP1_MA1352.1_JASPAR (TRP1:MA1352.1:JASPAR); m=41/42; ncol2=21; w=-5; offset=-5; strand=D; shift=3; score= 35.2; ---ACCCTAAACCCTAAACC
; cor=0.863; Ncor=0.450; logoDP=8.129; NsEucl=0.916; NSW=0.915; rcor=26; rNcor=38; rlogoDP=31; rNsEucl=40; rNSW=41; rank_mean=35.200; match_rank=41
a 0 0 0 253 19 17 30 29 302 304 307 4 13 1 3 296 295 306 3 6
c 0 0 0 4 250 263 218 0 0 0 0 302 290 296 2 2 9 0 288 292
g 0 0 0 8 11 14 11 3 2 1 0 0 0 6 2 2 2 0 1 4
t 0 0 0 42 27 13 48 275 3 2 0 1 4 4 300 7 1 1 15 5
|
| MYB92_MA1780.2_JASPAR_shift13 (MYB92:MA1780.2:JASPAR) |
 |
0.705 |
0.411 |
4.519 |
0.853 |
0.849 |
42 |
42 |
21 |
38 |
38 |
36.200 |
42 |
; oligos_7nt_mkv5_m3 versus MYB92_MA1780.2_JASPAR (MYB92:MA1780.2:JASPAR); m=42/42; ncol2=7; w=0; offset=5; strand=D; shift=13; score= 36.2; -------------ACCTAMc
; cor=0.705; Ncor=0.411; logoDP=4.519; NsEucl=0.853; NSW=0.849; rcor=42; rNcor=42; rlogoDP=21; rNsEucl=38; rNSW=38; rank_mean=36.200; match_rank=42
a 0 0 0 0 0 0 0 0 0 0 0 0 0 968 0 0 118 1000 701 91
c 0 0 0 0 0 0 0 0 0 0 0 0 0 32 1000 1000 0 0 299 642
g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64
t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 882 0 0 203
|