/var/www/html/rsat/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab 
 compare-matrices  -v 1 -format transfac -file $RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_discovered.tf -distinct -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
 Program version       	1.118
 Quick mode 
 Input files
	file1 	$RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_discovered.tf
	file2 	$RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_discovered.tf
 Output files
	match_table_txt	$RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
	prefix       	$RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_disco_compa
	alignments_1ton	$RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.tab
	alignments_1ton_html	$RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.html
	match_table_html	$RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_disco_compa.html
	html_index   	$RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_disco_compa_index.html
 Matrices
	file1	18 matrices	$RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file1	1	11	807
		file1	2	11	952
		file1	3	11	288
		file1	4	12	236
		file1	5	10	93
		file1	6	10	87
		file1	7	10	116
		file1	8	10	185
		file1	9	10	184
		file1	10	11	659
		file1	11	12	615
		...	8 more matrices
	file2	18 matrices	$RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.085746_2026-04-09.085746_eHLTRu/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file2		1		11		807
		file2		2		11		952
		file2		3		11		288
		file2		4		12		236
		file2		5		10		93
		file2		6		10		87
		file2		7		10		116
		file2		8		10		185
		file2		9		10		184
		file2		10		11		659
		file2		11		12		615
		...	8 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	w1           	Width of the first matrix
	8	w2           	Width of the second matrix
	9	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	10	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	11	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	12	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	13	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	14	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	15	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
id1 id2 name1 name2 cor Ncor w1 w2 w W Wr wr1 wr2 strand offset
oligos_6nt_mkv3_m9 oligos_6nt_mkv3_m9 oligos_6nt_mkv3_m9 oligos_6nt_mkv3_m9 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m8 oligos_6nt_mkv3_m8 oligos_6nt_mkv3_m8 oligos_6nt_mkv3_m8 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m3 oligos_6nt_mkv3_m3 oligos_6nt_mkv3_m3 oligos_6nt_mkv3_m3 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m2 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
positions_6nt_m4 positions_6nt_m4 positions_6nt_m4 positions_6nt_m4 1.000 1.000 14 14 14 14 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m5 oligos_6nt_mkv3_m5 oligos_6nt_mkv3_m5 oligos_6nt_mkv3_m5 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
positions_6nt_m6 positions_6nt_m6 positions_6nt_m6 positions_6nt_m6 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
positions_6nt_m8 positions_6nt_m8 positions_6nt_m8 positions_6nt_m8 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
positions_6nt_m7 positions_6nt_m7 positions_6nt_m7 positions_6nt_m7 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m6 oligos_6nt_mkv3_m6 oligos_6nt_mkv3_m6 oligos_6nt_mkv3_m6 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m10 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m1 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m4 oligos_6nt_mkv3_m4 oligos_6nt_mkv3_m4 oligos_6nt_mkv3_m4 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m7 oligos_6nt_mkv3_m7 oligos_6nt_mkv3_m7 oligos_6nt_mkv3_m7 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
positions_6nt_m5 positions_6nt_m5 positions_6nt_m5 positions_6nt_m5 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
positions_6nt_m2 positions_6nt_m2 positions_6nt_m2 positions_6nt_m2 1.000 1.000 13 13 13 13 1.0000 1.0000 1.0000 D 0
positions_6nt_m1 positions_6nt_m1 positions_6nt_m1 positions_6nt_m1 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
positions_6nt_m3 positions_6nt_m3 positions_6nt_m3 positions_6nt_m3 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m8 oligos_6nt_mkv3_m9 oligos_6nt_mkv3_m8 oligos_6nt_mkv3_m9 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 R 0
oligos_6nt_mkv3_m9 oligos_6nt_mkv3_m8 oligos_6nt_mkv3_m9 oligos_6nt_mkv3_m8 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 R 0
oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m2 0.999 0.999 11 11 11 11 1.0000 1.0000 1.0000 R 0
oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m1 0.999 0.999 11 11 11 11 1.0000 1.0000 1.0000 R 0
oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m1 0.950 0.950 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m10 0.950 0.950 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m10 0.941 0.941 11 11 11 11 1.0000 1.0000 1.0000 R 0
oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m2 0.941 0.941 11 11 11 11 1.0000 1.0000 1.0000 R 0
positions_6nt_m1 oligos_6nt_mkv3_m2 positions_6nt_m1 oligos_6nt_mkv3_m2 0.984 0.902 12 11 11 12 0.9167 0.9167 1.0000 D 0
oligos_6nt_mkv3_m2 positions_6nt_m1 oligos_6nt_mkv3_m2 positions_6nt_m1 0.984 0.902 11 12 11 12 0.9167 1.0000 0.9167 D 0
oligos_6nt_mkv3_m1 positions_6nt_m1 oligos_6nt_mkv3_m1 positions_6nt_m1 0.984 0.902 11 12 11 12 0.9167 1.0000 0.9167 R -1
positions_6nt_m1 oligos_6nt_mkv3_m1 positions_6nt_m1 oligos_6nt_mkv3_m1 0.984 0.902 12 11 11 12 0.9167 0.9167 1.0000 R 0
positions_6nt_m2 positions_6nt_m4 positions_6nt_m2 positions_6nt_m4 0.923 0.857 13 14 13 14 0.9286 1.0000 0.9286 D 0
positions_6nt_m4 positions_6nt_m2 positions_6nt_m4 positions_6nt_m2 0.923 0.857 14 13 13 14 0.9286 0.9286 1.0000 D 0
oligos_6nt_mkv3_m10 positions_6nt_m1 oligos_6nt_mkv3_m10 positions_6nt_m1 0.929 0.852 11 12 11 12 0.9167 1.0000 0.9167 R -1
positions_6nt_m1 oligos_6nt_mkv3_m10 positions_6nt_m1 oligos_6nt_mkv3_m10 0.929 0.852 12 11 11 12 0.9167 0.9167 1.0000 R 0
positions_6nt_m1 positions_6nt_m4 positions_6nt_m1 positions_6nt_m4 0.928 0.795 12 14 12 14 0.8571 1.0000 0.8571 R 0
positions_6nt_m4 positions_6nt_m1 positions_6nt_m4 positions_6nt_m1 0.928 0.795 14 12 12 14 0.8571 0.8571 1.0000 R 2
oligos_6nt_mkv3_m1 positions_6nt_m2 oligos_6nt_mkv3_m1 positions_6nt_m2 0.921 0.779 11 13 11 13 0.8462 1.0000 0.8462 D 0
positions_6nt_m2 oligos_6nt_mkv3_m1 positions_6nt_m2 oligos_6nt_mkv3_m1 0.921 0.779 13 11 11 13 0.8462 0.8462 1.0000 D 0
oligos_6nt_mkv3_m2 positions_6nt_m2 oligos_6nt_mkv3_m2 positions_6nt_m2 0.916 0.775 11 13 11 13 0.8462 1.0000 0.8462 R -2
positions_6nt_m2 oligos_6nt_mkv3_m2 positions_6nt_m2 oligos_6nt_mkv3_m2 0.916 0.775 13 11 11 13 0.8462 0.8462 1.0000 R 0
positions_6nt_m4 oligos_6nt_mkv3_m2 positions_6nt_m4 oligos_6nt_mkv3_m2 0.979 0.769 14 11 11 14 0.7857 0.7857 1.0000 R 0
oligos_6nt_mkv3_m2 positions_6nt_m4 oligos_6nt_mkv3_m2 positions_6nt_m4 0.979 0.769 11 14 11 14 0.7857 1.0000 0.7857 R -3
oligos_6nt_mkv3_m1 positions_6nt_m4 oligos_6nt_mkv3_m1 positions_6nt_m4 0.975 0.766 11 14 11 14 0.7857 1.0000 0.7857 D 0
positions_6nt_m4 oligos_6nt_mkv3_m1 positions_6nt_m4 oligos_6nt_mkv3_m1 0.975 0.766 14 11 11 14 0.7857 0.7857 1.0000 D 0
oligos_6nt_mkv3_m5 oligos_6nt_mkv3_m6 oligos_6nt_mkv3_m5 oligos_6nt_mkv3_m6 0.753 0.753 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv3_m6 oligos_6nt_mkv3_m5 oligos_6nt_mkv3_m6 oligos_6nt_mkv3_m5 0.753 0.753 10 10 10 10 1.0000 1.0000 1.0000 D 0
positions_6nt_m1 positions_6nt_m2 positions_6nt_m1 positions_6nt_m2 0.953 0.749 12 13 11 14 0.7857 0.9167 0.8462 R 1
positions_6nt_m2 positions_6nt_m1 positions_6nt_m2 positions_6nt_m1 0.953 0.749 13 12 11 14 0.7857 0.8462 0.9167 R 2
positions_6nt_m3 positions_6nt_m7 positions_6nt_m3 positions_6nt_m7 0.748 0.748 10 10 10 10 1.0000 1.0000 1.0000 R 0
positions_6nt_m7 positions_6nt_m3 positions_6nt_m7 positions_6nt_m3 0.748 0.748 10 10 10 10 1.0000 1.0000 1.0000 R 0
positions_6nt_m2 oligos_6nt_mkv3_m10 positions_6nt_m2 oligos_6nt_mkv3_m10 0.867 0.734 13 11 11 13 0.8462 0.8462 1.0000 D 0
oligos_6nt_mkv3_m10 positions_6nt_m2 oligos_6nt_mkv3_m10 positions_6nt_m2 0.867 0.734 11 13 11 13 0.8462 1.0000 0.8462 D 0
positions_6nt_m4 oligos_6nt_mkv3_m10 positions_6nt_m4 oligos_6nt_mkv3_m10 0.905 0.711 14 11 11 14 0.7857 0.7857 1.0000 D 0
oligos_6nt_mkv3_m10 positions_6nt_m4 oligos_6nt_mkv3_m10 positions_6nt_m4 0.905 0.711 11 14 11 14 0.7857 1.0000 0.7857 D 0
oligos_6nt_mkv3_m6 oligos_6nt_mkv3_m3 oligos_6nt_mkv3_m6 oligos_6nt_mkv3_m3 0.779 0.708 10 11 10 11 0.9091 1.0000 0.9091 D 0
oligos_6nt_mkv3_m3 oligos_6nt_mkv3_m6 oligos_6nt_mkv3_m3 oligos_6nt_mkv3_m6 0.779 0.708 11 10 10 11 0.9091 0.9091 1.0000 D 0
oligos_6nt_mkv3_m5 oligos_6nt_mkv3_m3 oligos_6nt_mkv3_m5 oligos_6nt_mkv3_m3 0.757 0.689 10 11 10 11 0.9091 1.0000 0.9091 D 0
oligos_6nt_mkv3_m3 oligos_6nt_mkv3_m5 oligos_6nt_mkv3_m3 oligos_6nt_mkv3_m5 0.757 0.689 11 10 10 11 0.9091 0.9091 1.0000 D 0
oligos_6nt_mkv3_m7 oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m7 oligos_6nt_mkv3_m2 0.756 0.687 10 11 10 11 0.9091 1.0000 0.9091 R -1
oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m7 oligos_6nt_mkv3_m2 oligos_6nt_mkv3_m7 0.756 0.687 11 10 10 11 0.9091 0.9091 1.0000 R 0
oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m7 oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m7 0.749 0.681 11 10 10 11 0.9091 0.9091 1.0000 D 1
oligos_6nt_mkv3_m7 oligos_6nt_mkv3_m1 oligos_6nt_mkv3_m7 oligos_6nt_mkv3_m1 0.749 0.681 10 11 10 11 0.9091 1.0000 0.9091 D -1
oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m9 oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m9 0.721 0.655 11 10 10 11 0.9091 0.9091 1.0000 R 1
oligos_6nt_mkv3_m9 oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m9 oligos_6nt_mkv3_m10 0.721 0.655 10 11 10 11 0.9091 1.0000 0.9091 R 0
oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m8 oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m8 0.720 0.654 11 10 10 11 0.9091 0.9091 1.0000 D 1
oligos_6nt_mkv3_m8 oligos_6nt_mkv3_m10 oligos_6nt_mkv3_m8 oligos_6nt_mkv3_m10 0.720 0.654 10 11 10 11 0.9091 1.0000 0.9091 D -1
positions_6nt_m1 oligos_6nt_mkv3_m7 positions_6nt_m1 oligos_6nt_mkv3_m7 0.750 0.625 12 10 10 12 0.8333 0.8333 1.0000 R 0
oligos_6nt_mkv3_m7 positions_6nt_m1 oligos_6nt_mkv3_m7 positions_6nt_m1 0.750 0.625 10 12 10 12 0.8333 1.0000 0.8333 R -2
oligos_6nt_mkv3_m7 positions_6nt_m2 oligos_6nt_mkv3_m7 positions_6nt_m2 0.718 0.553 10 13 10 13 0.7692 1.0000 0.7692 D -1
positions_6nt_m2 oligos_6nt_mkv3_m7 positions_6nt_m2 oligos_6nt_mkv3_m7 0.718 0.553 13 10 10 13 0.7692 0.7692 1.0000 D 1
oligos_6nt_mkv3_m7 positions_6nt_m4 oligos_6nt_mkv3_m7 positions_6nt_m4 0.739 0.528 10 14 10 14 0.7143 1.0000 0.7143 D -1
positions_6nt_m4 oligos_6nt_mkv3_m7 positions_6nt_m4 oligos_6nt_mkv3_m7 0.739 0.528 14 10 10 14 0.7143 0.7143 1.0000 D 1 
 Host name	rsat
 Job started	2026-04-09.085809
 Job done	2026-04-09.085823
 Seconds	0.73
	user	0.73
	system	0.48
	cuser	11.13
;	csystem	2.01