; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.120839_2026-04-09.120839_1NpHgB/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.120839_2026-04-09.120839_1NpHgB/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.120839_2026-04-09.120839_1NpHgB/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/04/09/peak-motifs.2026-04-09.120839_2026-04-09.120839_1NpHgB/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	43	54	60	5	108	7	4	101	105	83	86	81	24	44
c	14	10	5	101	1	2	106	1	4	5	12	5	19	23
g	14	14	16	2	2	103	1	3	2	2	4	5	19	19
t	42	35	32	5	2	1	2	8	2	23	11	22	51	27
//
; Sites	113
>site_0
AAGCAGCAATAATA
>site_1
TAACAGCTAACATA
>site_2
GAATAGCAAAATCA
>site_3
AACCTGCAAAAATT
>site_4
ATTCAGCAATGAGT
>site_5
ATGCAGCGAATACG
>site_6
AATCAGCAAAATTG
>site_7
AAGCAGCAAACCTG
>site_8
AATCAGCAATAATA
>site_9
TGACAGCAATAATA
>site_10
ATACAACAAACAAC
>site_11
AAACAACAAACACA
>site_12
CTAAAGCAAAATAC
>site_13
ACACAACAAAACAG
>site_14
AAACAGCACAAGTT
>site_15
TATCAGCAAAAATC
>site_16
TGTCAGCGAAAAGA
>site_17
CTCCAGCAAAAAGG
>site_18
AAACAGCAAGCTCT
>site_19
TGTCAGCTAAAACA
>site_20
TGTCAGCTAAAACA
>site_21
TCACAGCTAAAATA
>site_22
AGACAGAAAACATT
>site_23
TGTCAGCACAAATC
>site_24
ATGCAGCAAAAAAG
>site_25
TGCCAGCAATAATG
>site_26
ATACAGGAATAAGA
>site_27
TCACAGCAAAAAGT
>site_28
GAGAAGCAAAAATA
>site_29
CATCAGCAATATTC
>site_30
TTACAGAAAATAAA
>site_31
GTGCAGCAAAATAG
>site_32
AAATAGCAAAGACT
>site_33
AAGCAACAAAAAAC
>site_34
AACCAGCACAAATA
>site_35
AATCAGCAAAAAAA
>site_36
TTACAGCAAAATGT
>site_37
ACTCAACAAAAAAT
>site_38
TTACAGCAAAAAGA
>site_39
ATGCAGCAAAAAAA
>site_40
TTACAGCAAAAACT
>site_41
GAACAGCAACTGCA
>site_42
TTACAGCAAAATTT
>site_43
CCTCACCAAAAAGA
>site_44
AAGCAGCAAAAATT
>site_45
GTTCAGCAAACTTC
>site_46
ATACAGCAATCCAC
>site_47
CTACAGCAAAATGA
>site_48
TACCAGCAACTAGA
>site_49
TAACAGCGATAAAA
>site_50
TAACAGCATAAGCC
>site_51
TGTCAGCAAAATGG
>site_52
CAACAGTAAACAAC
>site_53
CAACACCAAAAATC
>site_54
ATTCAGCAACACTT
>site_55
AAACAGCAAAAACA
>site_56
TTACAGAAAACAAT
>site_57
TGTCAGCAAAAATA
>site_58
GAACAGCAGTAAAT
>site_59
TAAGAGCAAAAATA
>site_60
CATCAGCAATAAGA
>site_61
AATCAGCAAAAACT
>site_62
AGTTAGCAAAAAAC
>site_63
CTACAACAAAAATT
>site_64
AAACAGCAAGCTCT
>site_65
GCTCAGCAAAAAAA
>site_66
TGTCAGCTAAAACA
>site_67
TTACAGCAAAAATA
>site_68
TAACGGCAAACTAG
>site_69
ATACAGCATTAATA
>site_70
AAGCAGCAATAATA
>site_71
AGACAGCAATAATA
>site_72
AAATAGCAAATATA
>site_73
TATCAGCAAAAATG
>site_74
CTGCAGCAATATTT
>site_75
TTGCAGCAAAATTG
>site_76
ACAGAGCAAAAATT
>site_77
CTACAGCACAAATC
>site_78
TTACAGCAGAAACT
>site_79
GAACAGCAAAAAGC
>site_80
GCTCAGCTAAAATA
>site_81
TCTCAGTAAAAATT
>site_82
TTTCAGCAAAAATA
>site_83
AATCAGCTAAAATA
>site_84
CTGCAGCAATATCG
>site_85
TATCAGCAACGAGC
>site_86
TATCAGCAATAATA
>site_87
ATTCAGCAATAATT
>site_88
GATCAGCAATAAGG
>site_89
TAACAGCAATAGAA
>site_90
GAACAGCAACAGAA
>site_91
GAACAGCAAAAAGC
>site_92
ATGCAGCAAAAATC
>site_93
AAACAGCCAATACT
>site_94
AAAAAGCAAATATT
>site_95
TTACCGCAAAATAC
>site_96
TGTCAGCAAAAATA
>site_97
CTGCAGCAAAAATA
>site_98
TAAAAGCAAAATGC
>site_99
TAAAAGCAAAATGC
>site_100
TTACAGCAATAATC
>site_101
GAACAGCAATTTAT
>site_102
TAACAGCAAAAATG
>site_103
ACACAGAAAAGAAC
>site_104
GAACATCAAAAATC
>site_105
AAACTGCAAAACCG
>site_106
TAACAACAAAAATG
>site_107
AAATAGCAAATACT
>site_108
TAACAGCAATTAAA
>site_109
AGTCAGCTAAAATG
>site_110
ATACAGCAAAAATA
>site_111
TTGCAGCAAATTTG
>site_112
CAACGGCAAAATGA
a	21	21	0	0	60	0	60	60	21	23
c	9	20	0	0	0	0	0	0	6	7
g	13	8	0	60	0	0	0	0	14	14
t	17	11	60	0	0	60	0	0	19	16
//
; Sites	60
>site_0
AATGATAATA
>site_1
GCTGATAATA
>site_2
CCTGATAATT
>site_3
CCTGATAAAT
>site_4
GATGATAATA
>site_5
CCTGATAAAG
>site_6
AATGATAATG
>site_7
AATGATAATA
>site_8
AATGATAATA
>site_9
AATGATAATG
>site_10
TCTGATAATA
>site_11
TCTGATAAAG
>site_12
GATGATAAAA
>site_13
GCTGATAAAT
>site_14
ACTGATAAGA
>site_15
AATGATAAAT
>site_16
GATGATAAAT
>site_17
AATGATAATT
>site_18
TTTGATAAAA
>site_19
TATGATAATT
>site_20
CATGATAAGG
>site_21
ACTGATAATC
>site_22
TTTGATAAAA
>site_23
TGTGATAAGC
>site_24
GCTGATAAAT
>site_25
ATTGATAAAA
>site_26
GCTGATAAGT
>site_27
TTTGATAAAA
>site_28
ACTGATAAGG
>site_29
TATGATAATT
>site_30
CTTGATAACT
>site_31
TGTGATAACA
>site_32
CGTGATAAGA
>site_33
GGTGATAAGT
>site_34
ATTGATAAGC
>site_35
GATGATAACA
>site_36
TTTGATAATT
>site_37
CTTGATAAGG
>site_38
ACTGATAAGA
>site_39
AATGATAAAC
>site_40
TATGATAAAC
>site_41
AATGATAAAT
>site_42
TCTGATAAAG
>site_43
TTTGATAAAG
>site_44
CGTGATAATG
>site_45
TGTGATAACG
>site_46
GCTGATAATG
>site_47
ACTGATAAGC
>site_48
CATGATAAGG
>site_49
GCTGATAAGA
>site_50
AATGATAAGA
>site_51
TCTGATAATT
>site_52
GGTGATAAAC
>site_53
AGTGATAAAA
>site_54
AATGATAATT
>site_55
TATGATAATG
>site_56
ACTGATAACA
>site_57
GTTGATAAAA
>site_58
ACTGATAACA
>site_59
TTTGATAAAA
a	22	23	21	63	63	0	0	63	0	22	19
c	9	8	13	0	0	0	0	0	0	11	11
g	11	9	7	0	0	0	63	0	0	16	10
t	21	23	22	0	0	63	0	0	63	14	23
//
; Sites	63
>site_0
AATAATGATGA
>site_1
GGTAATGATAA
>site_2
CTGAATGATAT
>site_3
ATCAATGATAT
>site_4
ATTAATGATAA
>site_5
GCAAATGATAA
>site_6
GTTAATGATAA
>site_7
CCTAATGATAA
>site_8
TTTAATGATTT
>site_9
AAAAATGATGC
>site_10
TTTAATGATGG
>site_11
TTTAATGATCT
>site_12
ATAAATGATCC
>site_13
ATTAATGATTG
>site_14
TTTAATGATAC
>site_15
TTCAATGATAG
>site_16
TTCAATGATGT
>site_17
TGAAATGATAA
>site_18
ATGAATGATAA
>site_19
CCCAATGATGA
>site_20
TAAAATGATCA
>site_21
TATAATGATCT
>site_22
GCAAATGATCG
>site_23
TTTAATGATAT
>site_24
AACAATGATAG
>site_25
TACAATGATGT
>site_26
GTCAATGATTT
>site_27
AATAATGATGT
>site_28
ATGAATGATAA
>site_29
TAAAATGATCA
>site_30
AAGAATGATAT
>site_31
ATAAATGATTT
>site_32
GAAAATGATAT
>site_33
TAAAATGATAC
>site_34
CACAATGATTC
>site_35
TAGAATGATCC
>site_36
TGCAATGATCT
>site_37
AGTAATGATTC
>site_38
CCTAATGATTG
>site_39
CAAAATGATGC
>site_40
GTCAATGATGT
>site_41
GTCAATGATTT
>site_42
GGCAATGATGT
>site_43
TGTAATGATAA
>site_44
ATAAATGATTG
>site_45
ATAAATGATAA
>site_46
TCAAATGATGT
>site_47
TAGAATGATTT
>site_48
GATAATGATGT
>site_49
AAAAATGATCT
>site_50
CATAATGATAG
>site_51
ACAAATGATTC
>site_52
TGAAATGATGC
>site_53
GCAAATGATGC
>site_54
AATAATGATGA
>site_55
TAAAATGATTA
>site_56
TGTAATGATCG
>site_57
ATTAATGATAA
>site_58
CACAATGATGG
>site_59
AAAAATGATTT
>site_60
AAAAATGATCT
>site_61
CGTAATGATTA
>site_62
ATGAATGATAA
a	10	8	0	0	3	0	0	0	9	11
c	7	10	41	1	1	41	0	41	14	7
g	10	11	0	4	0	0	0	0	6	12
t	14	12	0	36	37	0	41	0	12	11
//
; Sites	41
>site_0
TTCTTCTCAT
>site_1
TTCTTCTCAC
>site_2
CCCTTCTCTT
>site_3
CTCTCCTCGG
>site_4
TTCTTCTCAC
>site_5
TCCGTCTCCC
>site_6
ACCTTCTCAG
>site_7
GGCTACTCCG
>site_8
GGCTACTCCG
>site_9
GGCTTCTCTG
>site_10
CCCCTCTCGT
>site_11
ATCTTCTCTG
>site_12
AGCTTCTCTC
>site_13
CTCTTCTCTG
>site_14
TCCTTCTCCA
>site_15
TGCTTCTCAA
>site_16
ATCTTCTCAA
>site_17
TTCTTCTCCA
>site_18
TGCTTCTCGA
>site_19
AACTTCTCCC
>site_20
ACCTTCTCTG
>site_21
AGCTTCTCTG
>site_22
AACTTCTCTG
>site_23
CTCTTCTCTT
>site_24
CACTTCTCTT
>site_25
TACTTCTCCC
>site_26
CACGTCTCGT
>site_27
TTCTTCTCCA
>site_28
GACTTCTCGA
>site_29
TTCTTCTCCT
>site_30
TTCTTCTCTT
>site_31
AACTTCTCAC
>site_32
GGCTTCTCGA
>site_33
GCCTTCTCAT
>site_34
GGCTACTCCG
>site_35
TGCGTCTCCG
>site_36
GGCTTCTCAA
>site_37
GCCTTCTCCT
>site_38
TCCTTCTCCA
>site_39
GACTTCTCTA
>site_40
ACCGTCTCCT
a	19	26	79	79	0	79	79	0	32	35
c	19	17	0	0	0	0	0	0	9	16
g	24	8	0	0	0	0	0	0	22	15
t	17	28	0	0	79	0	0	79	16	13
//
; Sites	79
>site_0
CTAATAATGA
>site_1
CAAATAATGG
>site_2
ATAATAATAA
>site_3
ATAATAATAA
>site_4
CTAATAATAA
>site_5
GGAATAATTA
>site_6
GAAATAATAC
>site_7
GCAATAATCA
>site_8
TAAATAATGT
>site_9
GCAATAATAA
>site_10
CAAATAATGA
>site_11
CTAATAATTT
>site_12
AAAATAATAG
>site_13
ATAATAATTA
>site_14
AAAATAATAA
>site_15
CAAATAATTA
>site_16
CTAATAATCT
>site_17
ATAATAATGC
>site_18
CTAATAATGC
>site_19
CAAATAATAA
>site_20
TAAATAATGC
>site_21
CTAATAATCA
>site_22
GTAATAATCA
>site_23
TGAATAATTG
>site_24
CTAATAATGA
>site_25
TGAATAATGC
>site_26
TTAATAATCA
>site_27
AAAATAATAA
>site_28
AGAATAATGT
>site_29
AGAATAATCC
>site_30
CTAATAATAA
>site_31
TAAATAATGT
>site_32
TTAATAATAT
>site_33
GCAATAATAG
>site_34
GCAATAATAG
>site_35
TAAATAATAT
>site_36
CTAATAATTC
>site_37
GAAATAATCA
>site_38
AGAATAATTG
>site_39
GAAATAATTA
>site_40
GTAATAATTG
>site_41
ATAATAATAA
>site_42
GCAATAATAA
>site_43
AAAATAATAG
>site_44
AAAATAATAG
>site_45
GCAATAATGA
>site_46
ACAATAATTT
>site_47
TAAATAATAT
>site_48
CTAATAATAT
>site_49
ATAATAATAA
>site_50
TTAATAATGC
>site_51
AAAATAATCA
>site_52
CAAATAATGA
>site_53
GTAATAATAC
>site_54
CAAATAATAA
>site_55
GTAATAATAG
>site_56
TTAATAATTG
>site_57
GCAATAATGC
>site_58
CTAATAATTG
>site_59
CCAATAATGC
>site_60
TCAATAATGA
>site_61
GCAATAATAC
>site_62
GCAATAATAT
>site_63
TGAATAATTC
>site_64
TCAATAATAT
>site_65
AGAATAATGA
>site_66
GCAATAATAC
>site_67
GCAATAATTG
>site_68
GCAATAATAA
>site_69
ATAATAATGC
>site_70
GTAATAATAA
>site_71
GAAATAATTA
>site_72
TAAATAATAA
>site_73
TAAATAATGT
>site_74
GCAATAATCG
>site_75
TAAATAATTG
>site_76
CAAATAATGC
>site_77
GTAATAATGA
>site_78
AAAATAATAA
; Host name	rsat
; Job started	2026-04-09.120847
; Job done	2026-04-09.120847
; Seconds	0.16
;	user	0.16
;	system	0.02
;	cuser	0
;	csystem	0
