;mode: matches	thresholds:	cor=-1.000000	ncor=-1.000000	w=0	ncor1=-1.000000	ncor2=-1.000000
#id1	id2	name1	name2	cor	Ncor	Ncor1	Ncor2	w1	w2	w	W	Wr	wr1	wr2	strand	offset	uncounted
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_1.ATTTCCTGTN	homer_1.ATTTCCTGTN	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_1.ATTTCCTGTN	homer_2.ACCGGAAGTG	0.776607	0.635406	0.698946	0.698946	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_1.ATTTCCTGTN	homer_3.AACCGGAAGT	0.722077	0.722077	0.722077	0.722077	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_1.ATTTCCTGTN	homer_4.ACAGGAAGTG	0.876491	0.717129	0.788842	0.788842	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_1.ATTTCCTGTN	homer_5.RACCGGAAGT	0.803506	0.803506	0.803506	0.803506	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_1.ATTTCCTGTN	homer_6.AGAGGAAGTG	0.796848	0.651967	0.717164	0.717164	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_1.ATTTCCTGTN	homer_7.NNAYTTCCTGHN	0.893634	0.744695	0.893634	0.744695	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_1.ATTTCCTGTN	homer_8.NRYTTCCGGH	0.821888	0.672454	0.739699	0.739699	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_1.ATTTCCTGTN	homer_9.MACAGGAAGT	0.894030	0.894030	0.894030	0.894030	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_1.ATTTCCTGTN	homer_10.ACTTCCKGKT	0.811547	0.811547	0.811547	0.811547	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_1.ATTTCCTGTN	homer_11.ACVAGGAAGT	0.741880	0.741880	0.741880	0.741880	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_1.ATTTCCTGTN	homer_12.YCTTATCTBN	0.376777	0.308272	0.339099	0.339099	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_1.ATTTCCTGTN	homer_13.NBWGATAAGR	0.342100	0.279900	0.307890	0.307890	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_1.ATTTCCTGTN	homer_14.TGGCAGTTGG	0.298978	0.244618	0.269080	0.269080	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_1.ATTTCCTGTN	homer_15.AVCCGGAAGT	0.708928	0.708928	0.708928	0.708928	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_1.ATTTCCTGTN	homer_16.ANCAGGAAGT	0.847231	0.847231	0.847231	0.847231	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_1.ATTTCCTGTN	homer_17.SAGATAAGRV	0.403115	0.268744	0.322492	0.322492	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_1.ATTTCCTGTN	homer_18.TGCTGAGTCA	0.567063	0.305342	0.396944	0.396944	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_1.ATTTCCTGTN	homer_19.GCTATTTTTAGC	0.475876	0.329452	0.428288	0.356907	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_1.ATTTCCTGTN	homer_20.GGCVGTTR	0.295222	0.236178	0.236178	0.295222	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_1.ATTTCCTGTN	homer_21.CYTGGCABNSTGCCAR	0.396314	0.209813	0.356683	0.222927	10	16	9	17	0.529412	0.900000	0.562500	R	-7	49
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_1.ATTTCCTGTN	homer_22.BBCTTATCTS	0.395617	0.263745	0.316494	0.316494	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_1.ATTTCCTGTN	homer_23.VACAGGAAAT	0.970370	0.970370	0.970370	0.970370	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_1.ATTTCCTGTN	homer_24.RGKGGGCGKGGC	0.221067	0.153047	0.198961	0.165800	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_1.ATTTCCTGTN	homer_25.AGATAASR	0.377161	0.240011	0.264012	0.330016	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_1.ATTTCCTGTN	homer_26.YGGCCCCGCCCC	0.239497	0.199581	0.239497	0.199581	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_1.ATTTCCTGTN	homer_27.AVCAGGAAGT	0.847281	0.847281	0.847281	0.847281	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_1.ATTTCCTGTN	homer_28.RGKGGGCGGAGC	0.260191	0.180133	0.234172	0.195144	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_1.ATTTCCTGTN	homer_29.AWWWTGCTGAGTCAT	0.528735	0.352490	0.528735	0.352490	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_1.ATTTCCTGTN	homer_30.CAAAGGTCAG	0.375946	0.375946	0.375946	0.375946	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_1.ATTTCCTGTN	homer_31.VTGACTCATC	0.473879	0.203091	0.284327	0.284327	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_1.ATTTCCTGTN	homer_32.AAAGRGGAAGTG	0.727119	0.605933	0.727119	0.605933	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_1.ATTTCCTGTN	homer_33.GRAASTGAAAST	0.465793	0.388161	0.465793	0.388161	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_1.ATTTCCTGTN	homer_34.CCCCTCCCCCAC	0.199745	0.166455	0.199745	0.166455	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_1.ATTTCCTGTN	homer_35.GAAAGTGAAAGT	0.457475	0.381229	0.457475	0.381229	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_1.ATTTCCTGTN	homer_36.DATGASTCATHN	0.357893	0.167017	0.250525	0.208771	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_1.ATTTCCTGTN	homer_37.NDATGASTCAYN	0.375871	0.175406	0.263110	0.219258	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_1.ATTTCCTGTN	homer_38.RATGASTCAT	0.199654	0.199654	0.199654	0.199654	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_1.ATTTCCTGTN	homer_39.DATGASTCAT	0.189635	0.189635	0.189635	0.189635	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_1.ATTTCCTGTN	homer_40.AGTTTCAKTTTC	0.498037	0.415030	0.498037	0.415030	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_1.ATTTCCTGTN	homer_41.NNATGASTCATH	0.371509	0.173371	0.260056	0.216713	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_1.ATTTCCTGTN	homer_42.SAAACCACAG	0.737002	0.245667	0.368501	0.368501	10	10	5	15	0.333333	0.500000	0.500000	R	5	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_1.ATTTCCTGTN	homer_43.GAAASYGAAASY	0.449859	0.374883	0.449859	0.374883	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_1.ATTTCCTGTN	homer_44.AVCAGCTG	0.321554	0.257243	0.257243	0.321554	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_1.ATTTCCTGTN	homer_45.SGTCACGTGR	0.282724	0.231320	0.254452	0.254452	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_1.ATTTCCTGTN	homer_46.NATGASTCABNN	0.392581	0.183204	0.274806	0.229005	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_1.ATTTCCTGTN	homer_47.GATGASTCATCN	0.374447	0.174742	0.262113	0.218428	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_1.ATTTCCTGTN	homer_48.AGTTTCASTTTC	0.468121	0.390101	0.468121	0.390101	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_1.ATTTCCTGTN	homer_49.RCAGGATGTGGT	0.770974	0.533751	0.693877	0.578231	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_1.ATTTCCTGTN	homer_50.GGGGGAATCCCC	0.533764	0.305008	0.427012	0.355843	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_1.ATTTCCTGTN	homer_51.GCTGTGGTTW	0.622401	0.266743	0.373441	0.373441	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_1.ATTTCCTGTN	homer_52.GGATGACTCATC	0.332004	0.154935	0.232403	0.193669	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_1.ATTTCCTGTN	homer_53.NWAACCACADNN	0.481120	0.224523	0.336784	0.280653	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_1.ATTTCCTGTN	homer_54.ACCATCTGTT	0.277373	0.277373	0.277373	0.277373	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_1.ATTTCCTGTN	homer_55.SVYTTCCNGGAARB	0.675986	0.482847	0.675986	0.482847	10	14	10	14	0.714286	1.000000	0.714286	D	-1	45
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_1.ATTTCCTGTN	homer_56.SCCTAGCAACAG	0.384766	0.320638	0.384766	0.320638	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_1.ATTTCCTGTN	homer_57.AAACCACARM	0.519900	0.222814	0.311940	0.311940	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_1.ATTTCCTGTN	homer_58.RTTATGYAAB	0.333606	0.333606	0.333606	0.333606	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_1.ATTTCCTGTN	homer_59.NYTTCCWGGAAR	0.678509	0.565424	0.678509	0.565424	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_1.ATTTCCTGTN	homer_60.ASWTCCTGBT	0.776795	0.776795	0.776795	0.776795	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_1.ATTTCCTGTN	homer_61.DGGGYGKGGC	0.311208	0.167574	0.217846	0.217846	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_1.ATTTCCTGTN	homer_62.TWGTCTGV	0.410559	0.328447	0.328447	0.410559	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_1.ATTTCCTGTN	homer_63.CTGGCAGSCTGCCA	0.427444	0.213722	0.341955	0.244254	10	14	8	16	0.500000	0.800000	0.571429	R	-6	45
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_1.ATTTCCTGTN	homer_64.VGGGRATTYCCC	0.564173	0.322385	0.451339	0.376116	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_1.ATTTCCTGTN	homer_65.CARRGKBCAAAGTYCA	0.320311	0.169577	0.288280	0.180175	10	16	9	17	0.529412	0.900000	0.562500	R	1	49
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_1.ATTTCCTGTN	homer_66.CCATTGTTNY	0.322017	0.263468	0.289815	0.289815	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_1.ATTTCCTGTN	homer_67.CYAAAAATAG	0.582741	0.388494	0.466193	0.466193	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_1.ATTTCCTGTN	homer_68.GGGGGGGG	0.425097	0.212549	0.255058	0.318823	10	8	6	12	0.500000	0.600000	0.750000	R	4	33
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_1.ATTTCCTGTN	homer_69.TTGAMCTTTG	0.359971	0.359971	0.359971	0.359971	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_1.ATTTCCTGTN	homer_70.MGGAAGTGAAAC	0.823713	0.384400	0.576599	0.480499	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_1.ATTTCCTGTN	homer_71.HACTTCCGGY	0.775757	0.634710	0.698181	0.698181	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_1.ATTTCCTGTN	homer_72.NRYTTCCGGY	0.772097	0.631716	0.694888	0.694888	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_1.ATTTCCTGTN	homer_73.AWWNTGCTGAGTCAT	0.529753	0.353169	0.529753	0.353169	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_1.ATTTCCTGTN	homer_74.AGGCCTAG	0.286069	0.228855	0.228855	0.286069	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_1.ATTTCCTGTN	homer_75.VTTACGTAAYNNNNN	0.293475	0.195650	0.293475	0.195650	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_1.ATTTCCTGTN	homer_76.TGCTGACTCA	0.575271	0.309761	0.402689	0.402689	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_1.ATTTCCTGTN	homer_77.ATTGCGCAAC	0.281112	0.281112	0.281112	0.281112	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_2.ACCGGAAGTG	homer_1.ATTTCCTGTN	0.776607	0.635406	0.698946	0.698946	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_2.ACCGGAAGTG	homer_2.ACCGGAAGTG	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_2.ACCGGAAGTG	homer_3.AACCGGAAGT	0.977203	0.799530	0.879483	0.879483	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_2.ACCGGAAGTG	homer_4.ACAGGAAGTG	0.908111	0.908111	0.908111	0.908111	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_2.ACCGGAAGTG	homer_5.RACCGGAAGT	0.987383	0.807859	0.888644	0.888644	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_2.ACCGGAAGTG	homer_6.AGAGGAAGTG	0.759949	0.759949	0.759949	0.759949	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_2.ACCGGAAGTG	homer_7.NNAYTTCCTGHN	0.918876	0.765730	0.918876	0.765730	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_2.ACCGGAAGTG	homer_8.NRYTTCCGGH	0.954773	0.954773	0.954773	0.954773	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_2.ACCGGAAGTG	homer_9.MACAGGAAGT	0.840451	0.687642	0.756406	0.756406	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_2.ACCGGAAGTG	homer_10.ACTTCCKGKT	0.949009	0.776462	0.854108	0.854108	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_2.ACCGGAAGTG	homer_11.ACVAGGAAGT	0.853458	0.698284	0.768112	0.768112	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_2.ACCGGAAGTG	homer_12.YCTTATCTBN	0.252161	0.206314	0.226945	0.226945	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_2.ACCGGAAGTG	homer_13.NBWGATAAGR	0.257995	0.211087	0.232196	0.232196	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_2.ACCGGAAGTG	homer_14.TGGCAGTTGG	0.385251	0.256834	0.308201	0.308201	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_2.ACCGGAAGTG	homer_15.AVCCGGAAGT	0.983734	0.804874	0.885361	0.885361	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_2.ACCGGAAGTG	homer_16.ANCAGGAAGT	0.835411	0.683518	0.751870	0.751870	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_2.ACCGGAAGTG	homer_17.SAGATAAGRV	0.275402	0.183601	0.220321	0.220321	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_2.ACCGGAAGTG	homer_18.TGCTGAGTCA	0.225933	0.225933	0.225933	0.225933	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_2.ACCGGAAGTG	homer_19.GCTATTTTTAGC	0.289496	0.241247	0.289496	0.241247	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_2.ACCGGAAGTG	homer_20.GGCVGTTR	0.417230	0.265510	0.292061	0.365077	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_2.ACCGGAAGTG	homer_21.CYTGGCABNSTGCCAR	0.451226	0.282016	0.451226	0.282016	10	16	10	16	0.625000	1.000000	0.625000	D	0	49
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_2.ACCGGAAGTG	homer_22.BBCTTATCTS	0.261746	0.174497	0.209397	0.209397	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_2.ACCGGAAGTG	homer_23.VACAGGAAAT	0.865001	0.707728	0.778501	0.778501	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_2.ACCGGAAGTG	homer_24.RGKGGGCGKGGC	0.359987	0.299989	0.359987	0.299989	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_2.ACCGGAAGTG	homer_25.AGATAASR	0.268725	0.171007	0.188108	0.235135	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_2.ACCGGAAGTG	homer_26.YGGCCCCGCCCC	0.360557	0.300464	0.360557	0.300464	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_2.ACCGGAAGTG	homer_27.AVCAGGAAGT	0.910155	0.744673	0.819140	0.819140	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_2.ACCGGAAGTG	homer_28.RGKGGGCGGAGC	0.427178	0.244102	0.341742	0.284785	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_2.ACCGGAAGTG	homer_29.AWWWTGCTGAGTCAT	0.325088	0.216725	0.325088	0.216725	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_2.ACCGGAAGTG	homer_30.CAAAGGTCAG	0.279249	0.186166	0.223399	0.223399	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_2.ACCGGAAGTG	homer_31.VTGACTCATC	0.193488	0.158308	0.174139	0.174139	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_2.ACCGGAAGTG	homer_32.AAAGRGGAAGTG	0.784551	0.653793	0.784551	0.653793	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_2.ACCGGAAGTG	homer_33.GRAASTGAAAST	0.599998	0.415383	0.539998	0.449999	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_2.ACCGGAAGTG	homer_34.CCCCTCCCCCAC	0.390806	0.325671	0.390806	0.325671	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_2.ACCGGAAGTG	homer_35.GAAAGTGAAAGT	0.550223	0.380923	0.495200	0.412667	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_2.ACCGGAAGTG	homer_36.DATGASTCATHN	0.162465	0.135388	0.162465	0.135388	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_2.ACCGGAAGTG	homer_37.NDATGASTCAYN	0.149224	0.103309	0.134302	0.111918	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_2.ACCGGAAGTG	homer_38.RATGASTCAT	0.143498	0.117407	0.129148	0.129148	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_2.ACCGGAAGTG	homer_39.DATGASTCAT	0.144287	0.118053	0.129858	0.129858	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_2.ACCGGAAGTG	homer_40.AGTTTCAKTTTC	0.551003	0.381463	0.495902	0.413252	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_2.ACCGGAAGTG	homer_41.NNATGASTCATH	0.143556	0.119630	0.143556	0.119630	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_2.ACCGGAAGTG	homer_42.SAAACCACAG	0.414581	0.223236	0.290207	0.290207	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_2.ACCGGAAGTG	homer_43.GAAASYGAAASY	0.624186	0.432128	0.561767	0.468139	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_2.ACCGGAAGTG	homer_44.AVCAGCTG	0.391523	0.313219	0.313219	0.391523	10	8	8	10	0.800000	0.800000	1.000000	D	0	33
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_2.ACCGGAAGTG	homer_45.SGTCACGTGR	0.221849	0.181513	0.199664	0.199664	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_2.ACCGGAAGTG	homer_46.NATGASTCABNN	0.121183	0.100986	0.121183	0.100986	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_2.ACCGGAAGTG	homer_47.GATGASTCATCN	0.173090	0.144242	0.173090	0.144242	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_2.ACCGGAAGTG	homer_48.AGTTTCASTTTC	0.542248	0.375403	0.488023	0.406686	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_2.ACCGGAAGTG	homer_49.RCAGGATGTGGT	0.748239	0.623532	0.748239	0.623532	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_2.ACCGGAAGTG	homer_50.GGGGGAATCCCC	0.411591	0.342993	0.411591	0.342993	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_2.ACCGGAAGTG	homer_51.GCTGTGGTTW	0.335318	0.223545	0.268254	0.268254	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_2.ACCGGAAGTG	homer_52.GGATGACTCATC	0.172398	0.143665	0.172398	0.143665	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_2.ACCGGAAGTG	homer_53.NWAACCACADNN	0.363278	0.251500	0.326951	0.272459	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_2.ACCGGAAGTG	homer_54.ACCATCTGTT	0.402135	0.402135	0.402135	0.402135	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_2.ACCGGAAGTG	homer_55.SVYTTCCNGGAARB	0.783777	0.559841	0.783777	0.559841	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_2.ACCGGAAGTG	homer_56.SCCTAGCAACAG	0.333730	0.278108	0.333730	0.278108	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_2.ACCGGAAGTG	homer_57.AAACCACARM	0.384833	0.256555	0.307866	0.307866	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_2.ACCGGAAGTG	homer_58.RTTATGYAAB	0.302273	0.201515	0.241818	0.241818	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_2.ACCGGAAGTG	homer_59.NYTTCCWGGAAR	0.753940	0.521958	0.678546	0.565455	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_2.ACCGGAAGTG	homer_60.ASWTCCTGBT	0.861495	0.704859	0.775345	0.775345	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_2.ACCGGAAGTG	homer_61.DGGGYGKGGC	0.431345	0.287564	0.345076	0.345076	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_2.ACCGGAAGTG	homer_62.TWGTCTGV	0.212338	0.169871	0.169871	0.212338	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_2.ACCGGAAGTG	homer_63.CTGGCAGSCTGCCA	0.517425	0.310455	0.465683	0.332631	10	14	9	15	0.600000	0.900000	0.642857	D	1	45
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_2.ACCGGAAGTG	homer_64.VGGGRATTYCCC	0.443450	0.307004	0.399105	0.332587	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_2.ACCGGAAGTG	homer_65.CARRGKBCAAAGTYCA	0.242974	0.151859	0.242974	0.151859	10	16	10	16	0.625000	1.000000	0.625000	D	-4	49
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_2.ACCGGAAGTG	homer_66.CCATTGTTNY	0.211643	0.211643	0.211643	0.211643	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_2.ACCGGAAGTG	homer_67.CYAAAAATAG	0.391580	0.320384	0.352422	0.352422	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_2.ACCGGAAGTG	homer_68.GGGGGGGG	0.512517	0.326147	0.358762	0.448453	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_2.ACCGGAAGTG	homer_69.TTGAMCTTTG	0.286468	0.190979	0.229174	0.229174	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_2.ACCGGAAGTG	homer_70.MGGAAGTGAAAC	0.867150	0.495514	0.693720	0.578100	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_2.ACCGGAAGTG	homer_71.HACTTCCGGY	0.985783	0.985783	0.985783	0.985783	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_2.ACCGGAAGTG	homer_72.NRYTTCCGGY	0.966463	0.966463	0.966463	0.966463	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_2.ACCGGAAGTG	homer_73.AWWNTGCTGAGTCAT	0.332532	0.221688	0.332532	0.221688	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_2.ACCGGAAGTG	homer_74.AGGCCTAG	0.228798	0.183038	0.183038	0.228798	10	8	8	10	0.800000	0.800000	1.000000	D	2	33
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_2.ACCGGAAGTG	homer_75.VTTACGTAAYNNNNN	0.325638	0.217092	0.325638	0.217092	10	15	10	15	0.666667	1.000000	0.666667	D	-2	47
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_2.ACCGGAAGTG	homer_76.TGCTGACTCA	0.275534	0.275534	0.275534	0.275534	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_2.ACCGGAAGTG	homer_77.ATTGCGCAAC	0.376065	0.250710	0.300852	0.300852	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_3.AACCGGAAGT	homer_1.ATTTCCTGTN	0.722077	0.722077	0.722077	0.722077	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_3.AACCGGAAGT	homer_2.ACCGGAAGTG	0.977203	0.799530	0.879483	0.879483	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_3.AACCGGAAGT	homer_3.AACCGGAAGT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_3.AACCGGAAGT	homer_4.ACAGGAAGTG	0.910732	0.745145	0.819659	0.819659	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_3.AACCGGAAGT	homer_5.RACCGGAAGT	0.986095	0.986095	0.986095	0.986095	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_3.AACCGGAAGT	homer_6.AGAGGAAGTG	0.782817	0.640486	0.704535	0.704535	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_3.AACCGGAAGT	homer_7.NNAYTTCCTGHN	0.859087	0.715906	0.859087	0.715906	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_3.AACCGGAAGT	homer_8.NRYTTCCGGH	0.902236	0.738193	0.812012	0.812012	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_3.AACCGGAAGT	homer_9.MACAGGAAGT	0.811643	0.811643	0.811643	0.811643	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_3.AACCGGAAGT	homer_10.ACTTCCKGKT	0.945198	0.945198	0.945198	0.945198	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_3.AACCGGAAGT	homer_11.ACVAGGAAGT	0.854795	0.854795	0.854795	0.854795	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_3.AACCGGAAGT	homer_12.YCTTATCTBN	0.165357	0.165357	0.165357	0.165357	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_3.AACCGGAAGT	homer_13.NBWGATAAGR	0.137468	0.137468	0.137468	0.137468	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_3.AACCGGAAGT	homer_14.TGGCAGTTGG	0.546636	0.294342	0.382645	0.382645	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_3.AACCGGAAGT	homer_15.AVCCGGAAGT	0.992678	0.992678	0.992678	0.992678	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_3.AACCGGAAGT	homer_16.ANCAGGAAGT	0.817672	0.817672	0.817672	0.817672	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_3.AACCGGAAGT	homer_17.SAGATAAGRV	0.180480	0.147665	0.162432	0.162432	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_3.AACCGGAAGT	homer_18.TGCTGAGTCA	0.198810	0.162663	0.178929	0.178929	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_3.AACCGGAAGT	homer_19.GCTATTTTTAGC	0.354749	0.245595	0.319274	0.266061	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_3.AACCGGAAGT	homer_20.GGCVGTTR	0.582576	0.291288	0.349545	0.436932	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_3.AACCGGAAGT	homer_21.CYTGGCABNSTGCCAR	0.412578	0.218424	0.371321	0.232075	10	16	9	17	0.529412	0.900000	0.562500	D	1	49
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_3.AACCGGAAGT	homer_22.BBCTTATCTS	0.178157	0.145765	0.160341	0.160341	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_3.AACCGGAAGT	homer_23.VACAGGAAAT	0.813726	0.813726	0.813726	0.813726	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_3.AACCGGAAGT	homer_24.RGKGGGCGKGGC	0.364793	0.252549	0.328314	0.273595	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_3.AACCGGAAGT	homer_25.AGATAASR	0.407756	0.116502	0.163102	0.203878	10	8	4	14	0.285714	0.400000	0.500000	D	-4	33
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_3.AACCGGAAGT	homer_26.YGGCCCCGCCCC	0.302768	0.252306	0.302768	0.252306	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_3.AACCGGAAGT	homer_27.AVCAGGAAGT	0.886194	0.886194	0.886194	0.886194	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_3.AACCGGAAGT	homer_28.RGKGGGCGGAGC	0.371452	0.257159	0.334307	0.278589	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_3.AACCGGAAGT	homer_29.AWWWTGCTGAGTCAT	0.278820	0.185880	0.278820	0.185880	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_3.AACCGGAAGT	homer_30.CAAAGGTCAG	0.407232	0.219279	0.285062	0.285062	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_3.AACCGGAAGT	homer_31.VTGACTCATC	0.243965	0.131366	0.170775	0.170775	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_3.AACCGGAAGT	homer_32.AAAGRGGAAGTG	0.806208	0.671840	0.806208	0.671840	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_3.AACCGGAAGT	homer_33.GRAASTGAAAST	0.620032	0.516693	0.620032	0.516693	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_3.AACCGGAAGT	homer_34.CCCCTCCCCCAC	0.321243	0.267702	0.321243	0.267702	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_3.AACCGGAAGT	homer_35.GAAAGTGAAAGT	0.584475	0.487062	0.584475	0.487062	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_3.AACCGGAAGT	homer_36.DATGASTCATHN	0.216327	0.123616	0.173062	0.144218	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_3.AACCGGAAGT	homer_37.NDATGASTCAYN	0.212098	0.121199	0.169678	0.141399	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_3.AACCGGAAGT	homer_38.RATGASTCAT	0.278272	0.119259	0.166963	0.166963	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_3.AACCGGAAGT	homer_39.DATGASTCAT	0.208641	0.112345	0.146049	0.146049	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_3.AACCGGAAGT	homer_40.AGTTTCAKTTTC	0.568919	0.474099	0.568919	0.474099	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_3.AACCGGAAGT	homer_41.NNATGASTCATH	0.230877	0.131930	0.184702	0.153918	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_3.AACCGGAAGT	homer_42.SAAACCACAG	0.463287	0.308858	0.370630	0.370630	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_3.AACCGGAAGT	homer_43.GAAASYGAAASY	0.638495	0.532080	0.638495	0.532080	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_3.AACCGGAAGT	homer_44.AVCAGCTG	0.428519	0.342815	0.342815	0.428519	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_3.AACCGGAAGT	homer_45.SGTCACGTGR	0.289329	0.192886	0.231463	0.231463	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_3.AACCGGAAGT	homer_46.NATGASTCABNN	0.179080	0.102331	0.143264	0.119387	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_3.AACCGGAAGT	homer_47.GATGASTCATCN	0.209629	0.119788	0.167703	0.139753	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_3.AACCGGAAGT	homer_48.AGTTTCASTTTC	0.570069	0.475058	0.570069	0.475058	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_3.AACCGGAAGT	homer_49.RCAGGATGTGGT	0.770805	0.533634	0.693725	0.578104	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_3.AACCGGAAGT	homer_50.GGGGGAATCCCC	0.404450	0.280004	0.364005	0.303337	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_3.AACCGGAAGT	homer_51.GCTGTGGTTW	0.372240	0.304560	0.335016	0.335016	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_3.AACCGGAAGT	homer_52.GGATGACTCATC	0.240634	0.112296	0.168444	0.140370	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_3.AACCGGAAGT	homer_53.NWAACCACADNN	0.379554	0.316295	0.379554	0.316295	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_3.AACCGGAAGT	homer_54.ACCATCTGTT	0.420700	0.344209	0.378630	0.378630	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_3.AACCGGAAGT	homer_55.SVYTTCCNGGAARB	0.675288	0.482349	0.675288	0.482349	10	14	10	14	0.714286	1.000000	0.714286	D	-4	45
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_3.AACCGGAAGT	homer_56.SCCTAGCAACAG	0.276313	0.230261	0.276313	0.230261	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_3.AACCGGAAGT	homer_57.AAACCACARM	0.415184	0.339696	0.373665	0.373665	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_3.AACCGGAAGT	homer_58.RTTATGYAAB	0.236280	0.193320	0.212652	0.212652	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_3.AACCGGAAGT	homer_59.NYTTCCWGGAAR	0.628731	0.523942	0.628731	0.523942	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_3.AACCGGAAGT	homer_60.ASWTCCTGBT	0.804307	0.804307	0.804307	0.804307	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_3.AACCGGAAGT	homer_61.DGGGYGKGGC	0.427857	0.230385	0.299500	0.299500	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_3.AACCGGAAGT	homer_62.TWGTCTGV	0.550740	0.157354	0.220296	0.275370	10	8	4	14	0.285714	0.400000	0.500000	D	6	33
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_3.AACCGGAAGT	homer_63.CTGGCAGSCTGCCA	0.492030	0.246015	0.393624	0.281160	10	14	8	16	0.500000	0.800000	0.571429	D	2	45
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_3.AACCGGAAGT	homer_64.VGGGRATTYCCC	0.472330	0.269903	0.377864	0.314887	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_3.AACCGGAAGT	homer_65.CARRGKBCAAAGTYCA	0.356751	0.222969	0.356751	0.222969	10	16	10	16	0.625000	1.000000	0.625000	D	-3	49
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_3.AACCGGAAGT	homer_66.CCATTGTTNY	0.203007	0.166097	0.182706	0.182706	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_3.AACCGGAAGT	homer_67.CYAAAAATAG	0.475329	0.316886	0.380263	0.380263	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_3.AACCGGAAGT	homer_68.GGGGGGGG	0.470980	0.235490	0.282588	0.353235	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_3.AACCGGAAGT	homer_69.TTGAMCTTTG	0.524321	0.224709	0.314593	0.314593	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_3.AACCGGAAGT	homer_70.MGGAAGTGAAAC	0.930180	0.434084	0.651126	0.542605	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_3.AACCGGAAGT	homer_71.HACTTCCGGY	0.961187	0.786426	0.865068	0.865068	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_3.AACCGGAAGT	homer_72.NRYTTCCGGY	0.928806	0.759932	0.835925	0.835925	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_3.AACCGGAAGT	homer_73.AWWNTGCTGAGTCAT	0.292000	0.194666	0.292000	0.194666	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_3.AACCGGAAGT	homer_74.AGGCCTAG	0.446798	0.171846	0.223399	0.279249	10	8	5	13	0.384615	0.500000	0.625000	R	-3	33
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_3.AACCGGAAGT	homer_75.VTTACGTAAYNNNNN	0.241734	0.161156	0.241734	0.161156	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_3.AACCGGAAGT	homer_76.TGCTGACTCA	0.248885	0.203633	0.223996	0.223996	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_3.AACCGGAAGT	homer_77.ATTGCGCAAC	0.302072	0.247150	0.271865	0.271865	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_4.ACAGGAAGTG	homer_1.ATTTCCTGTN	0.876491	0.717129	0.788842	0.788842	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_4.ACAGGAAGTG	homer_2.ACCGGAAGTG	0.908111	0.908111	0.908111	0.908111	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_4.ACAGGAAGTG	homer_3.AACCGGAAGT	0.910732	0.745145	0.819659	0.819659	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_4.ACAGGAAGTG	homer_4.ACAGGAAGTG	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_4.ACAGGAAGTG	homer_5.RACCGGAAGT	0.953832	0.780408	0.858449	0.858449	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_4.ACAGGAAGTG	homer_6.AGAGGAAGTG	0.919253	0.919253	0.919253	0.919253	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_4.ACAGGAAGTG	homer_7.NNAYTTCCTGHN	0.913900	0.761583	0.913900	0.761583	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_4.ACAGGAAGTG	homer_8.NRYTTCCGGH	0.875326	0.875326	0.875326	0.875326	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_4.ACAGGAAGTG	homer_9.MACAGGAAGT	0.959136	0.784748	0.863223	0.863223	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_4.ACAGGAAGTG	homer_10.ACTTCCKGKT	0.965806	0.790205	0.869226	0.869226	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_4.ACAGGAAGTG	homer_11.ACVAGGAAGT	0.922517	0.754786	0.830265	0.830265	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_4.ACAGGAAGTG	homer_12.YCTTATCTBN	0.241218	0.197360	0.217096	0.217096	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_4.ACAGGAAGTG	homer_13.NBWGATAAGR	0.231582	0.189476	0.208424	0.208424	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_4.ACAGGAAGTG	homer_14.TGGCAGTTGG	0.454085	0.302724	0.363268	0.363268	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_4.ACAGGAAGTG	homer_15.AVCCGGAAGT	0.891504	0.729413	0.802354	0.802354	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_4.ACAGGAAGTG	homer_16.ANCAGGAAGT	0.955146	0.781483	0.859631	0.859631	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_4.ACAGGAAGTG	homer_17.SAGATAAGRV	0.219731	0.179780	0.197758	0.197758	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_4.ACAGGAAGTG	homer_18.TGCTGAGTCA	0.465250	0.199393	0.279150	0.279150	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_4.ACAGGAAGTG	homer_19.GCTATTTTTAGC	0.263510	0.219591	0.263510	0.219591	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_4.ACAGGAAGTG	homer_20.GGCVGTTR	0.478079	0.304232	0.334656	0.418319	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_4.ACAGGAAGTG	homer_21.CYTGGCABNSTGCCAR	0.421205	0.263253	0.421205	0.263253	10	16	10	16	0.625000	1.000000	0.625000	D	0	49
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_4.ACAGGAAGTG	homer_22.BBCTTATCTS	0.207254	0.169572	0.186529	0.186529	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_4.ACAGGAAGTG	homer_23.VACAGGAAAT	0.916055	0.749499	0.824449	0.824449	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_4.ACAGGAAGTG	homer_24.RGKGGGCGKGGC	0.440519	0.367099	0.440519	0.367099	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_4.ACAGGAAGTG	homer_25.AGATAASR	0.219883	0.175906	0.175906	0.219883	10	8	8	10	0.800000	0.800000	1.000000	D	2	33
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_4.ACAGGAAGTG	homer_26.YGGCCCCGCCCC	0.261408	0.217840	0.261408	0.217840	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_4.ACAGGAAGTG	homer_27.AVCAGGAAGT	0.945965	0.773972	0.851369	0.851369	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_4.ACAGGAAGTG	homer_28.RGKGGGCGGAGC	0.300538	0.250449	0.300538	0.250449	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_4.ACAGGAAGTG	homer_29.AWWWTGCTGAGTCAT	0.380190	0.253460	0.380190	0.253460	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_4.ACAGGAAGTG	homer_30.CAAAGGTCAG	0.221791	0.181465	0.199612	0.199612	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_4.ACAGGAAGTG	homer_31.VTGACTCATC	0.307341	0.131718	0.184405	0.184405	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_4.ACAGGAAGTG	homer_32.AAAGRGGAAGTG	0.868265	0.723555	0.868265	0.723555	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_4.ACAGGAAGTG	homer_33.GRAASTGAAAST	0.600675	0.415852	0.540607	0.450506	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_4.ACAGGAAGTG	homer_34.CCCCTCCCCCAC	0.424837	0.354031	0.424837	0.354031	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_4.ACAGGAAGTG	homer_35.GAAAGTGAAAGT	0.596538	0.412988	0.536884	0.447403	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_4.ACAGGAAGTG	homer_36.DATGASTCATHN	0.539975	0.158816	0.269987	0.224989	10	12	5	17	0.294118	0.500000	0.416667	R	5	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_4.ACAGGAAGTG	homer_37.NDATGASTCAYN	0.641938	0.142653	0.256775	0.213979	10	12	4	18	0.222222	0.400000	0.333333	R	6	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_4.ACAGGAAGTG	homer_38.RATGASTCAT	0.601224	0.150306	0.240490	0.240490	10	10	4	16	0.250000	0.400000	0.400000	D	6	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_4.ACAGGAAGTG	homer_39.DATGASTCAT	0.586321	0.146580	0.234529	0.234529	10	10	4	16	0.250000	0.400000	0.400000	D	6	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_4.ACAGGAAGTG	homer_40.AGTTTCAKTTTC	0.561337	0.388618	0.505204	0.421003	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_4.ACAGGAAGTG	homer_41.NNATGASTCATH	0.511388	0.150408	0.255694	0.213078	10	12	5	17	0.294118	0.500000	0.416667	D	5	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_4.ACAGGAAGTG	homer_42.SAAACCACAG	0.794549	0.198637	0.317820	0.317820	10	10	4	16	0.250000	0.400000	0.400000	D	-6	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_4.ACAGGAAGTG	homer_43.GAAASYGAAASY	0.604593	0.418564	0.544134	0.453445	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_4.ACAGGAAGTG	homer_44.AVCAGCTG	0.296935	0.237548	0.237548	0.296935	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_4.ACAGGAAGTG	homer_45.SGTCACGTGR	0.372216	0.304540	0.334994	0.334994	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_4.ACAGGAAGTG	homer_46.NATGASTCABNN	0.496739	0.146100	0.248370	0.206975	10	12	5	17	0.294118	0.500000	0.416667	R	5	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_4.ACAGGAAGTG	homer_47.GATGASTCATCN	0.493095	0.145028	0.246548	0.205456	10	12	5	17	0.294118	0.500000	0.416667	R	5	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_4.ACAGGAAGTG	homer_48.AGTTTCASTTTC	0.564078	0.390516	0.507670	0.423059	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_4.ACAGGAAGTG	homer_49.RCAGGATGTGGT	0.923029	0.769191	0.923029	0.769191	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_4.ACAGGAAGTG	homer_50.GGGGGAATCCCC	0.366388	0.305323	0.366388	0.305323	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_4.ACAGGAAGTG	homer_51.GCTGTGGTTW	0.646682	0.215561	0.323341	0.323341	10	10	5	15	0.333333	0.500000	0.500000	R	-5	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_4.ACAGGAAGTG	homer_52.GGATGACTCATC	0.302320	0.141083	0.211624	0.176353	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_4.ACAGGAAGTG	homer_53.NWAACCACADNN	0.419035	0.195550	0.293325	0.244437	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_4.ACAGGAAGTG	homer_54.ACCATCTGTT	0.311052	0.311052	0.311052	0.311052	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_4.ACAGGAAGTG	homer_55.SVYTTCCNGGAARB	0.740850	0.529179	0.740850	0.529179	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_4.ACAGGAAGTG	homer_56.SCCTAGCAACAG	0.378133	0.315111	0.378133	0.315111	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_4.ACAGGAAGTG	homer_57.AAACCACARM	0.497742	0.213318	0.298645	0.298645	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_4.ACAGGAAGTG	homer_58.RTTATGYAAB	0.271954	0.181303	0.217563	0.217563	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_4.ACAGGAAGTG	homer_59.NYTTCCWGGAAR	0.722545	0.500223	0.650290	0.541908	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_4.ACAGGAAGTG	homer_60.ASWTCCTGBT	0.883411	0.722791	0.795070	0.795070	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_4.ACAGGAAGTG	homer_61.DGGGYGKGGC	0.544569	0.363046	0.435655	0.435655	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_4.ACAGGAAGTG	homer_62.TWGTCTGV	0.295748	0.236598	0.236598	0.295748	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_4.ACAGGAAGTG	homer_63.CTGGCAGSCTGCCA	0.482221	0.289333	0.433999	0.309999	10	14	9	15	0.600000	0.900000	0.642857	D	1	45
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_4.ACAGGAAGTG	homer_64.VGGGRATTYCCC	0.447399	0.309738	0.402659	0.335549	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_4.ACAGGAAGTG	homer_65.CARRGKBCAAAGTYCA	0.296867	0.185542	0.296867	0.185542	10	16	10	16	0.625000	1.000000	0.625000	D	-4	49
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_4.ACAGGAAGTG	homer_66.CCATTGTTNY	0.264481	0.264481	0.264481	0.264481	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_4.ACAGGAAGTG	homer_67.CYAAAAATAG	0.345263	0.282488	0.310736	0.310736	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_4.ACAGGAAGTG	homer_68.GGGGGGGG	0.507584	0.323008	0.355309	0.444136	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_4.ACAGGAAGTG	homer_69.TTGAMCTTTG	0.392286	0.211231	0.274600	0.274600	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_4.ACAGGAAGTG	homer_70.MGGAAGTGAAAC	0.916786	0.523878	0.733429	0.611191	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_4.ACAGGAAGTG	homer_71.HACTTCCGGY	0.868276	0.868276	0.868276	0.868276	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_4.ACAGGAAGTG	homer_72.NRYTTCCGGY	0.822677	0.822677	0.822677	0.822677	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_4.ACAGGAAGTG	homer_73.AWWNTGCTGAGTCAT	0.389912	0.259941	0.389912	0.259941	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_4.ACAGGAAGTG	homer_74.AGGCCTAG	0.291731	0.233384	0.233384	0.291731	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_4.ACAGGAAGTG	homer_75.VTTACGTAAYNNNNN	0.222783	0.148522	0.222783	0.148522	10	15	10	15	0.666667	1.000000	0.666667	D	-2	47
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_4.ACAGGAAGTG	homer_76.TGCTGACTCA	0.242059	0.242059	0.242059	0.242059	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_4.ACAGGAAGTG	homer_77.ATTGCGCAAC	0.272180	0.181453	0.217744	0.217744	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_5.RACCGGAAGT	homer_1.ATTTCCTGTN	0.803506	0.803506	0.803506	0.803506	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_5.RACCGGAAGT	homer_2.ACCGGAAGTG	0.987383	0.807859	0.888644	0.888644	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_5.RACCGGAAGT	homer_3.AACCGGAAGT	0.986095	0.986095	0.986095	0.986095	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_5.RACCGGAAGT	homer_4.ACAGGAAGTG	0.953832	0.780408	0.858449	0.858449	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_5.RACCGGAAGT	homer_5.RACCGGAAGT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_5.RACCGGAAGT	homer_6.AGAGGAAGTG	0.829330	0.678543	0.746397	0.746397	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_5.RACCGGAAGT	homer_7.NNAYTTCCTGHN	0.913515	0.761263	0.913515	0.761263	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_5.RACCGGAAGT	homer_8.NRYTTCCGGH	0.931979	0.762528	0.838781	0.838781	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_5.RACCGGAAGT	homer_9.MACAGGAAGT	0.880275	0.880275	0.880275	0.880275	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_5.RACCGGAAGT	homer_10.ACTTCCKGKT	0.965170	0.965170	0.965170	0.965170	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_5.RACCGGAAGT	homer_11.ACVAGGAAGT	0.860698	0.860698	0.860698	0.860698	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_5.RACCGGAAGT	homer_12.YCTTATCTBN	0.145021	0.145021	0.145021	0.145021	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_5.RACCGGAAGT	homer_13.NBWGATAAGR	0.161308	0.131979	0.145177	0.145177	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_5.RACCGGAAGT	homer_14.TGGCAGTTGG	0.538786	0.290116	0.377150	0.377150	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_5.RACCGGAAGT	homer_15.AVCCGGAAGT	0.978623	0.978623	0.978623	0.978623	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_5.RACCGGAAGT	homer_16.ANCAGGAAGT	0.860152	0.860152	0.860152	0.860152	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_5.RACCGGAAGT	homer_17.SAGATAAGRV	0.154179	0.126146	0.138761	0.138761	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_5.RACCGGAAGT	homer_18.TGCTGAGTCA	0.346316	0.186478	0.242421	0.242421	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_5.RACCGGAAGT	homer_19.GCTATTTTTAGC	0.339728	0.235197	0.305755	0.254796	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_5.RACCGGAAGT	homer_20.GGCVGTTR	0.562355	0.281178	0.337413	0.421767	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_5.RACCGGAAGT	homer_21.CYTGGCABNSTGCCAR	0.438231	0.232004	0.394407	0.246505	10	16	9	17	0.529412	0.900000	0.562500	D	1	49
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_5.RACCGGAAGT	homer_22.BBCTTATCTS	0.155628	0.127332	0.140065	0.140065	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_5.RACCGGAAGT	homer_23.VACAGGAAAT	0.884201	0.884201	0.884201	0.884201	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_5.RACCGGAAGT	homer_24.RGKGGGCGKGGC	0.382128	0.264550	0.343915	0.286596	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_5.RACCGGAAGT	homer_25.AGATAASR	0.475880	0.135966	0.190352	0.237940	10	8	4	14	0.285714	0.400000	0.500000	D	-4	33
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_5.RACCGGAAGT	homer_26.YGGCCCCGCCCC	0.311484	0.259570	0.311484	0.259570	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_5.RACCGGAAGT	homer_27.AVCAGGAAGT	0.915243	0.915243	0.915243	0.915243	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_5.RACCGGAAGT	homer_28.RGKGGGCGGAGC	0.376503	0.260656	0.338853	0.282377	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_5.RACCGGAAGT	homer_29.AWWWTGCTGAGTCAT	0.314190	0.209460	0.314190	0.209460	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_5.RACCGGAAGT	homer_30.CAAAGGTCAG	0.232017	0.189832	0.208815	0.208815	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_5.RACCGGAAGT	homer_31.VTGACTCATC	0.179648	0.119765	0.143718	0.143718	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_5.RACCGGAAGT	homer_32.AAAGRGGAAGTG	0.825603	0.688003	0.825603	0.688003	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_5.RACCGGAAGT	homer_33.GRAASTGAAAST	0.610969	0.509141	0.610969	0.509141	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_5.RACCGGAAGT	homer_34.CCCCTCCCCCAC	0.342943	0.285786	0.342943	0.285786	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_5.RACCGGAAGT	homer_35.GAAAGTGAAAGT	0.580234	0.483529	0.580234	0.483529	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_5.RACCGGAAGT	homer_36.DATGASTCATHN	0.203377	0.116216	0.162702	0.135585	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_5.RACCGGAAGT	homer_37.NDATGASTCAYN	0.190380	0.108788	0.152304	0.126920	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_5.RACCGGAAGT	homer_38.RATGASTCAT	0.248345	0.106434	0.149007	0.149007	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_5.RACCGGAAGT	homer_39.DATGASTCAT	0.191543	0.103139	0.134080	0.134080	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_5.RACCGGAAGT	homer_40.AGTTTCAKTTTC	0.563620	0.469683	0.563620	0.469683	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_5.RACCGGAAGT	homer_41.NNATGASTCATH	0.212997	0.121713	0.170398	0.141998	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_5.RACCGGAAGT	homer_42.SAAACCACAG	0.416240	0.277494	0.332992	0.332992	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_5.RACCGGAAGT	homer_43.GAAASYGAAASY	0.628114	0.523429	0.628114	0.523429	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_5.RACCGGAAGT	homer_44.AVCAGCTG	0.367180	0.293744	0.293744	0.367180	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_5.RACCGGAAGT	homer_45.SGTCACGTGR	0.237331	0.194180	0.213598	0.213598	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_5.RACCGGAAGT	homer_46.NATGASTCABNN	0.162301	0.092743	0.129841	0.108201	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_5.RACCGGAAGT	homer_47.GATGASTCATCN	0.191576	0.109472	0.153261	0.127717	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_5.RACCGGAAGT	homer_48.AGTTTCASTTTC	0.565920	0.471600	0.565920	0.471600	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_5.RACCGGAAGT	homer_49.RCAGGATGTGGT	0.820529	0.568058	0.738476	0.615397	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_5.RACCGGAAGT	homer_50.GGGGGAATCCCC	0.439819	0.304490	0.395837	0.329864	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_5.RACCGGAAGT	homer_51.GCTGTGGTTW	0.331393	0.271139	0.298253	0.298253	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_5.RACCGGAAGT	homer_52.GGATGACTCATC	0.161443	0.111768	0.145299	0.121082	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_5.RACCGGAAGT	homer_53.NWAACCACADNN	0.344441	0.287034	0.344441	0.287034	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_5.RACCGGAAGT	homer_54.ACCATCTGTT	0.386244	0.316018	0.347619	0.347619	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_5.RACCGGAAGT	homer_55.SVYTTCCNGGAARB	0.700664	0.500475	0.700664	0.500475	10	14	10	14	0.714286	1.000000	0.714286	D	-4	45
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_5.RACCGGAAGT	homer_56.SCCTAGCAACAG	0.307662	0.256385	0.307662	0.256385	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_5.RACCGGAAGT	homer_57.AAACCACARM	0.373104	0.305267	0.335794	0.335794	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_5.RACCGGAAGT	homer_58.RTTATGYAAB	0.250359	0.204839	0.225323	0.225323	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_5.RACCGGAAGT	homer_59.NYTTCCWGGAAR	0.657258	0.547715	0.657258	0.547715	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_5.RACCGGAAGT	homer_60.ASWTCCTGBT	0.842204	0.842204	0.842204	0.842204	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_5.RACCGGAAGT	homer_61.DGGGYGKGGC	0.462226	0.248891	0.323558	0.323558	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_5.RACCGGAAGT	homer_62.TWGTCTGV	0.196466	0.157173	0.157173	0.196466	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_5.RACCGGAAGT	homer_63.CTGGCAGSCTGCCA	0.534314	0.267157	0.427451	0.305322	10	14	8	16	0.500000	0.800000	0.571429	D	2	45
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_5.RACCGGAAGT	homer_64.VGGGRATTYCCC	0.506649	0.289514	0.405319	0.337766	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_5.RACCGGAAGT	homer_65.CARRGKBCAAAGTYCA	0.318596	0.199122	0.318596	0.199122	10	16	10	16	0.625000	1.000000	0.625000	D	-3	49
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_5.RACCGGAAGT	homer_66.CCATTGTTNY	0.218987	0.179171	0.197088	0.197088	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_5.RACCGGAAGT	homer_67.CYAAAAATAG	0.459014	0.306009	0.367211	0.367211	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_5.RACCGGAAGT	homer_68.GGGGGGGG	0.496637	0.248318	0.297982	0.372478	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_5.RACCGGAAGT	homer_69.TTGAMCTTTG	0.483998	0.207428	0.290399	0.290399	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_5.RACCGGAAGT	homer_70.MGGAAGTGAAAC	0.946836	0.441857	0.662785	0.552321	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_5.RACCGGAAGT	homer_71.HACTTCCGGY	0.967000	0.791181	0.870300	0.870300	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_5.RACCGGAAGT	homer_72.NRYTTCCGGY	0.935092	0.765076	0.841583	0.841583	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_5.RACCGGAAGT	homer_73.AWWNTGCTGAGTCAT	0.322814	0.215210	0.322814	0.215210	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_5.RACCGGAAGT	homer_74.AGGCCTAG	0.216433	0.173146	0.173146	0.216433	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_5.RACCGGAAGT	homer_75.VTTACGTAAYNNNNN	0.240131	0.160087	0.240131	0.160087	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_5.RACCGGAAGT	homer_76.TGCTGACTCA	0.399945	0.215355	0.279961	0.279961	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_5.RACCGGAAGT	homer_77.ATTGCGCAAC	0.299667	0.245182	0.269700	0.269700	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_6.AGAGGAAGTG	homer_1.ATTTCCTGTN	0.796848	0.651967	0.717164	0.717164	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_6.AGAGGAAGTG	homer_2.ACCGGAAGTG	0.759949	0.759949	0.759949	0.759949	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_6.AGAGGAAGTG	homer_3.AACCGGAAGT	0.782817	0.640486	0.704535	0.704535	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_6.AGAGGAAGTG	homer_4.ACAGGAAGTG	0.919253	0.919253	0.919253	0.919253	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_6.AGAGGAAGTG	homer_5.RACCGGAAGT	0.829330	0.678543	0.746397	0.746397	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_6.AGAGGAAGTG	homer_6.AGAGGAAGTG	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_6.AGAGGAAGTG	homer_7.NNAYTTCCTGHN	0.820263	0.683553	0.820263	0.683553	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_6.AGAGGAAGTG	homer_8.NRYTTCCGGH	0.766687	0.766687	0.766687	0.766687	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_6.AGAGGAAGTG	homer_9.MACAGGAAGT	0.875834	0.716591	0.788250	0.788250	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_6.AGAGGAAGTG	homer_10.ACTTCCKGKT	0.908400	0.743236	0.817560	0.817560	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_6.AGAGGAAGTG	homer_11.ACVAGGAAGT	0.915511	0.749054	0.823960	0.823960	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_6.AGAGGAAGTG	homer_12.YCTTATCTBN	0.319331	0.212887	0.255465	0.255465	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_6.AGAGGAAGTG	homer_13.NBWGATAAGR	0.317413	0.211609	0.253931	0.253931	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_6.AGAGGAAGTG	homer_14.TGGCAGTTGG	0.461210	0.307474	0.368968	0.368968	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_6.AGAGGAAGTG	homer_15.AVCCGGAAGT	0.761186	0.622789	0.685068	0.685068	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_6.AGAGGAAGTG	homer_16.ANCAGGAAGT	0.932544	0.762991	0.839290	0.839290	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_6.AGAGGAAGTG	homer_17.SAGATAAGRV	0.271495	0.222132	0.244346	0.244346	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_6.AGAGGAAGTG	homer_18.TGCTGAGTCA	0.263903	0.263903	0.263903	0.263903	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_6.AGAGGAAGTG	homer_19.GCTATTTTTAGC	0.169285	0.141071	0.169285	0.141071	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_6.AGAGGAAGTG	homer_20.GGCVGTTR	0.482063	0.306767	0.337444	0.421805	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_6.AGAGGAAGTG	homer_21.CYTGGCABNSTGCCAR	0.351421	0.219638	0.351421	0.219638	10	16	10	16	0.625000	1.000000	0.625000	D	0	49
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_6.AGAGGAAGTG	homer_22.BBCTTATCTS	0.278550	0.227905	0.250695	0.250695	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_6.AGAGGAAGTG	homer_23.VACAGGAAAT	0.790293	0.646603	0.711264	0.711264	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_6.AGAGGAAGTG	homer_24.RGKGGGCGKGGC	0.526643	0.438869	0.526643	0.438869	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_6.AGAGGAAGTG	homer_25.AGATAASR	0.333857	0.267085	0.267085	0.333857	10	8	8	10	0.800000	0.800000	1.000000	D	0	33
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_6.AGAGGAAGTG	homer_26.YGGCCCCGCCCC	0.365282	0.252888	0.328754	0.273962	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_6.AGAGGAAGTG	homer_27.AVCAGGAAGT	0.887843	0.726417	0.799059	0.799059	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_6.AGAGGAAGTG	homer_28.RGKGGGCGGAGC	0.351702	0.293085	0.351702	0.293085	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_6.AGAGGAAGTG	homer_29.AWWWTGCTGAGTCAT	0.326123	0.217416	0.326123	0.217416	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_6.AGAGGAAGTG	homer_30.CAAAGGTCAG	0.302301	0.201534	0.241841	0.241841	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_6.AGAGGAAGTG	homer_31.VTGACTCATC	0.344379	0.229586	0.275503	0.275503	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_6.AGAGGAAGTG	homer_32.AAAGRGGAAGTG	0.952270	0.793558	0.952270	0.793558	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_6.AGAGGAAGTG	homer_33.GRAASTGAAAST	0.626588	0.433792	0.563929	0.469941	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_6.AGAGGAAGTG	homer_34.CCCCTCCCCCAC	0.493490	0.411241	0.493490	0.411241	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_6.AGAGGAAGTG	homer_35.GAAAGTGAAAGT	0.637388	0.441268	0.573649	0.478041	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_6.AGAGGAAGTG	homer_36.DATGASTCATHN	0.284058	0.236715	0.284058	0.236715	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_6.AGAGGAAGTG	homer_37.NDATGASTCAYN	0.290987	0.242490	0.290987	0.242490	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_6.AGAGGAAGTG	homer_38.RATGASTCAT	0.310057	0.253683	0.279052	0.279052	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_6.AGAGGAAGTG	homer_39.DATGASTCAT	0.298590	0.244301	0.268731	0.268731	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_6.AGAGGAAGTG	homer_40.AGTTTCAKTTTC	0.565059	0.391195	0.508553	0.423794	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_6.AGAGGAAGTG	homer_41.NNATGASTCATH	0.296617	0.247181	0.296617	0.247181	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_6.AGAGGAAGTG	homer_42.SAAACCACAG	0.474003	0.158001	0.237002	0.237002	10	10	5	15	0.333333	0.500000	0.500000	R	5	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_6.AGAGGAAGTG	homer_43.GAAASYGAAASY	0.613353	0.424629	0.552017	0.460014	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_6.AGAGGAAGTG	homer_44.AVCAGCTG	0.262186	0.209748	0.209748	0.262186	10	8	8	10	0.800000	0.800000	1.000000	D	2	33
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_6.AGAGGAAGTG	homer_45.SGTCACGTGR	0.431786	0.353280	0.388608	0.388608	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_6.AGAGGAAGTG	homer_46.NATGASTCABNN	0.321441	0.267867	0.321441	0.267867	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_6.AGAGGAAGTG	homer_47.GATGASTCATCN	0.269084	0.224237	0.269084	0.224237	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_6.AGAGGAAGTG	homer_48.AGTTTCASTTTC	0.577390	0.399731	0.519651	0.433042	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_6.AGAGGAAGTG	homer_49.RCAGGATGTGGT	0.892603	0.743836	0.892603	0.743836	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_6.AGAGGAAGTG	homer_50.GGGGGAATCCCC	0.415908	0.346590	0.415908	0.346590	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_6.AGAGGAAGTG	homer_51.GCTGTGGTTW	0.489787	0.209909	0.293872	0.293872	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_6.AGAGGAAGTG	homer_52.GGATGACTCATC	0.261972	0.218310	0.261972	0.218310	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_6.AGAGGAAGTG	homer_53.NWAACCACADNN	0.437885	0.204346	0.306519	0.255433	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_6.AGAGGAAGTG	homer_54.ACCATCTGTT	0.232252	0.232252	0.232252	0.232252	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_6.AGAGGAAGTG	homer_55.SVYTTCCNGGAARB	0.600381	0.428843	0.600381	0.428843	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_6.AGAGGAAGTG	homer_56.SCCTAGCAACAG	0.401329	0.334441	0.401329	0.334441	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_6.AGAGGAAGTG	homer_57.AAACCACARM	0.506146	0.216920	0.303687	0.303687	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_6.AGAGGAAGTG	homer_58.RTTATGYAAB	0.358761	0.239174	0.287009	0.287009	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_6.AGAGGAAGTG	homer_59.NYTTCCWGGAAR	0.581598	0.402645	0.523438	0.436198	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_6.AGAGGAAGTG	homer_60.ASWTCCTGBT	0.706548	0.578085	0.635893	0.635893	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_6.AGAGGAAGTG	homer_61.DGGGYGKGGC	0.551213	0.367475	0.440971	0.440971	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_6.AGAGGAAGTG	homer_62.TWGTCTGV	0.200912	0.160730	0.160730	0.200912	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_6.AGAGGAAGTG	homer_63.CTGGCAGSCTGCCA	0.464129	0.232065	0.371304	0.265217	10	14	8	16	0.500000	0.800000	0.571429	R	2	45
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_6.AGAGGAAGTG	homer_64.VGGGRATTYCCC	0.470056	0.325423	0.423050	0.352542	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_6.AGAGGAAGTG	homer_65.CARRGKBCAAAGTYCA	0.320400	0.200250	0.320400	0.200250	10	16	10	16	0.625000	1.000000	0.625000	D	-4	49
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_6.AGAGGAAGTG	homer_66.CCATTGTTNY	0.296733	0.296733	0.296733	0.296733	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_6.AGAGGAAGTG	homer_67.CYAAAAATAG	0.232035	0.189846	0.208831	0.208831	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_6.AGAGGAAGTG	homer_68.GGGGGGGG	0.503911	0.320671	0.352738	0.440922	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_6.AGAGGAAGTG	homer_69.TTGAMCTTTG	0.411789	0.221732	0.288252	0.288252	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_6.AGAGGAAGTG	homer_70.MGGAAGTGAAAC	0.913552	0.522029	0.730841	0.609034	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_6.AGAGGAAGTG	homer_71.HACTTCCGGY	0.731475	0.731475	0.731475	0.731475	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_6.AGAGGAAGTG	homer_72.NRYTTCCGGY	0.665560	0.665560	0.665560	0.665560	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_6.AGAGGAAGTG	homer_73.AWWNTGCTGAGTCAT	0.307623	0.205082	0.307623	0.205082	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_6.AGAGGAAGTG	homer_74.AGGCCTAG	0.286101	0.228881	0.228881	0.286101	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_6.AGAGGAAGTG	homer_75.VTTACGTAAYNNNNN	0.279603	0.186402	0.279603	0.186402	10	15	10	15	0.666667	1.000000	0.666667	D	-2	47
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_6.AGAGGAAGTG	homer_76.TGCTGACTCA	0.286024	0.286024	0.286024	0.286024	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_6.AGAGGAAGTG	homer_77.ATTGCGCAAC	0.410311	0.273541	0.328249	0.328249	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_7.NNAYTTCCTGHN	homer_1.ATTTCCTGTN	0.893634	0.744695	0.744695	0.893634	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_7.NNAYTTCCTGHN	homer_2.ACCGGAAGTG	0.918876	0.765730	0.765730	0.918876	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_7.NNAYTTCCTGHN	homer_3.AACCGGAAGT	0.859087	0.715906	0.715906	0.859087	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_7.NNAYTTCCTGHN	homer_4.ACAGGAAGTG	0.913900	0.761583	0.761583	0.913900	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_7.NNAYTTCCTGHN	homer_5.RACCGGAAGT	0.913515	0.761263	0.761263	0.913515	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_7.NNAYTTCCTGHN	homer_6.AGAGGAAGTG	0.820263	0.683553	0.683553	0.820263	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_7.NNAYTTCCTGHN	homer_7.NNAYTTCCTGHN	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_7.NNAYTTCCTGHN	homer_8.NRYTTCCGGH	0.970017	0.808348	0.808348	0.970017	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_7.NNAYTTCCTGHN	homer_9.MACAGGAAGT	0.893362	0.744469	0.744469	0.893362	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_7.NNAYTTCCTGHN	homer_10.ACTTCCKGKT	0.924412	0.770344	0.770344	0.924412	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_7.NNAYTTCCTGHN	homer_11.ACVAGGAAGT	0.841878	0.701565	0.701565	0.841878	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_7.NNAYTTCCTGHN	homer_12.YCTTATCTBN	0.371239	0.309366	0.309366	0.371239	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_7.NNAYTTCCTGHN	homer_13.NBWGATAAGR	0.377579	0.314649	0.314649	0.377579	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_7.NNAYTTCCTGHN	homer_14.TGGCAGTTGG	0.304649	0.210911	0.228487	0.274184	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_7.NNAYTTCCTGHN	homer_15.AVCCGGAAGT	0.870518	0.725432	0.725432	0.870518	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_7.NNAYTTCCTGHN	homer_16.ANCAGGAAGT	0.891271	0.742726	0.742726	0.891271	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_7.NNAYTTCCTGHN	homer_17.SAGATAAGRV	0.361428	0.250219	0.271071	0.325285	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_7.NNAYTTCCTGHN	homer_18.TGCTGAGTCA	0.428557	0.199993	0.249991	0.299990	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_7.NNAYTTCCTGHN	homer_19.GCTATTTTTAGC	0.284258	0.240526	0.260569	0.260569	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_7.NNAYTTCCTGHN	homer_20.GGCVGTTR	0.327214	0.218142	0.218142	0.327214	12	8	8	12	0.666667	0.666667	1.000000	R	0	37
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_7.NNAYTTCCTGHN	homer_21.CYTGGCABNSTGCCAR	0.455615	0.294810	0.417647	0.313235	12	16	11	17	0.647059	0.916667	0.687500	R	-5	53
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_7.NNAYTTCCTGHN	homer_22.BBCTTATCTS	0.366837	0.253964	0.275127	0.330153	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_7.NNAYTTCCTGHN	homer_23.VACAGGAAAT	0.914367	0.761973	0.761973	0.914367	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_7.NNAYTTCCTGHN	homer_24.RGKGGGCGKGGC	0.350579	0.296644	0.321364	0.321364	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_7.NNAYTTCCTGHN	homer_25.AGATAASR	0.414941	0.276627	0.276627	0.414941	12	8	8	12	0.666667	0.666667	1.000000	R	0	37
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_7.NNAYTTCCTGHN	homer_26.YGGCCCCGCCCC	0.332256	0.281140	0.304568	0.304568	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_7.NNAYTTCCTGHN	homer_27.AVCAGGAAGT	0.933184	0.777653	0.777653	0.933184	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_7.NNAYTTCCTGHN	homer_28.RGKGGGCGGAGC	0.422865	0.253719	0.317148	0.317148	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_7.NNAYTTCCTGHN	homer_29.AWWWTGCTGAGTCAT	0.419634	0.288498	0.384664	0.307731	12	15	11	16	0.687500	0.916667	0.733333	D	1	51
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_7.NNAYTTCCTGHN	homer_30.CAAAGGTCAG	0.326780	0.272317	0.272317	0.326780	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_7.NNAYTTCCTGHN	homer_31.VTGACTCATC	0.251283	0.209402	0.209402	0.251283	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_7.NNAYTTCCTGHN	homer_32.AAAGRGGAAGTG	0.792819	0.670847	0.726751	0.726751	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_7.NNAYTTCCTGHN	homer_33.GRAASTGAAAST	0.512146	0.365818	0.426788	0.426788	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_7.NNAYTTCCTGHN	homer_34.CCCCTCCCCCAC	0.369525	0.312675	0.338731	0.338731	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_7.NNAYTTCCTGHN	homer_35.GAAAGTGAAAGT	0.492800	0.352000	0.410667	0.410667	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_7.NNAYTTCCTGHN	homer_36.DATGASTCATHN	0.235450	0.199227	0.215829	0.215829	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_7.NNAYTTCCTGHN	homer_37.NDATGASTCAYN	0.240643	0.171888	0.200536	0.200536	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_7.NNAYTTCCTGHN	homer_38.RATGASTCAT	0.218429	0.182025	0.182025	0.218429	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_7.NNAYTTCCTGHN	homer_39.DATGASTCAT	0.217641	0.181367	0.181367	0.217641	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_7.NNAYTTCCTGHN	homer_40.AGTTTCAKTTTC	0.473919	0.401009	0.434426	0.434426	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_7.NNAYTTCCTGHN	homer_41.NNATGASTCATH	0.216140	0.182888	0.198128	0.198128	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_7.NNAYTTCCTGHN	homer_42.SAAACCACAG	0.230316	0.191930	0.191930	0.230316	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_7.NNAYTTCCTGHN	homer_43.GAAASYGAAASY	0.514542	0.367530	0.428785	0.428785	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_7.NNAYTTCCTGHN	homer_44.AVCAGCTG	0.339100	0.182592	0.197808	0.296712	12	8	7	13	0.538462	0.583333	0.875000	D	5	37
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_7.NNAYTTCCTGHN	homer_45.SGTCACGTGR	0.169363	0.141136	0.141136	0.169363	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_7.NNAYTTCCTGHN	homer_46.NATGASTCABNN	0.188149	0.159203	0.172470	0.172470	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_7.NNAYTTCCTGHN	homer_47.GATGASTCATCN	0.239982	0.203061	0.219983	0.219983	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_7.NNAYTTCCTGHN	homer_48.AGTTTCASTTTC	0.419100	0.354623	0.384175	0.384175	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_7.NNAYTTCCTGHN	homer_49.RCAGGATGTGGT	0.768822	0.650542	0.704754	0.704754	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_7.NNAYTTCCTGHN	homer_50.GGGGGAATCCCC	0.457062	0.386744	0.418973	0.418973	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_7.NNAYTTCCTGHN	homer_51.GCTGTGGTTW	0.413733	0.155150	0.206866	0.248240	12	10	6	16	0.375000	0.500000	0.600000	D	6	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_7.NNAYTTCCTGHN	homer_52.GGATGACTCATC	0.255758	0.216411	0.234445	0.234445	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_7.NNAYTTCCTGHN	homer_53.NWAACCACADNN	0.248763	0.177688	0.207303	0.207303	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_7.NNAYTTCCTGHN	homer_54.ACCATCTGTT	0.344853	0.287378	0.287378	0.344853	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_7.NNAYTTCCTGHN	homer_55.SVYTTCCNGGAARB	0.697138	0.511234	0.639043	0.547751	12	14	11	15	0.733333	0.916667	0.785714	D	1	49
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_7.NNAYTTCCTGHN	homer_56.SCCTAGCAACAG	0.383556	0.324548	0.351593	0.351593	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_7.NNAYTTCCTGHN	homer_57.AAACCACARM	0.249672	0.172850	0.187254	0.224705	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_7.NNAYTTCCTGHN	homer_58.RTTATGYAAB	0.272275	0.188498	0.204206	0.245048	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_7.NNAYTTCCTGHN	homer_59.NYTTCCWGGAAR	0.694462	0.496044	0.578719	0.578719	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_7.NNAYTTCCTGHN	homer_60.ASWTCCTGBT	0.877216	0.731014	0.731014	0.877216	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_7.NNAYTTCCTGHN	homer_61.DGGGYGKGGC	0.405755	0.280908	0.304317	0.365180	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_7.NNAYTTCCTGHN	homer_62.TWGTCTGV	0.280708	0.187139	0.187139	0.280708	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_7.NNAYTTCCTGHN	homer_63.CTGGCAGSCTGCCA	0.485654	0.303534	0.404712	0.346896	12	14	10	16	0.625000	0.833333	0.714286	R	-4	49
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_7.NNAYTTCCTGHN	homer_64.VGGGRATTYCCC	0.483917	0.345655	0.403264	0.403264	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_7.NNAYTTCCTGHN	homer_65.CARRGKBCAAAGTYCA	0.202832	0.152124	0.202832	0.152124	12	16	12	16	0.750000	1.000000	0.750000	R	-2	53
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_7.NNAYTTCCTGHN	homer_66.CCATTGTTNY	0.249095	0.207579	0.207579	0.249095	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_7.NNAYTTCCTGHN	homer_67.CYAAAAATAG	0.353473	0.294561	0.294561	0.353473	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_7.NNAYTTCCTGHN	homer_68.GGGGGGGG	0.416640	0.277760	0.277760	0.416640	12	8	8	12	0.666667	0.666667	1.000000	R	0	37
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_7.NNAYTTCCTGHN	homer_69.TTGAMCTTTG	0.279152	0.232627	0.232627	0.279152	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_7.NNAYTTCCTGHN	homer_70.MGGAAGTGAAAC	0.764838	0.458903	0.573629	0.573629	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_7.NNAYTTCCTGHN	homer_71.HACTTCCGGY	0.923628	0.769690	0.769690	0.923628	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_7.NNAYTTCCTGHN	homer_72.NRYTTCCGGY	0.917317	0.764431	0.764431	0.917317	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_7.NNAYTTCCTGHN	homer_73.AWWNTGCTGAGTCAT	0.424954	0.292156	0.389541	0.311633	12	15	11	16	0.687500	0.916667	0.733333	D	1	51
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_7.NNAYTTCCTGHN	homer_74.AGGCCTAG	0.305859	0.203906	0.203906	0.305859	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_7.NNAYTTCCTGHN	homer_75.VTTACGTAAYNNNNN	0.235005	0.188004	0.235005	0.188004	12	15	12	15	0.800000	1.000000	0.800000	R	-2	51
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_7.NNAYTTCCTGHN	homer_76.TGCTGACTCA	0.469380	0.219044	0.273805	0.328566	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_7.NNAYTTCCTGHN	homer_77.ATTGCGCAAC	0.302856	0.209670	0.227142	0.272571	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_8.NRYTTCCGGH	homer_1.ATTTCCTGTN	0.821888	0.672454	0.739699	0.739699	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_8.NRYTTCCGGH	homer_2.ACCGGAAGTG	0.954773	0.954773	0.954773	0.954773	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_8.NRYTTCCGGH	homer_3.AACCGGAAGT	0.902236	0.738193	0.812012	0.812012	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_8.NRYTTCCGGH	homer_4.ACAGGAAGTG	0.875326	0.875326	0.875326	0.875326	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_8.NRYTTCCGGH	homer_5.RACCGGAAGT	0.931979	0.762528	0.838781	0.838781	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_8.NRYTTCCGGH	homer_6.AGAGGAAGTG	0.766687	0.766687	0.766687	0.766687	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_8.NRYTTCCGGH	homer_7.NNAYTTCCTGHN	0.970017	0.808348	0.970017	0.808348	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_8.NRYTTCCGGH	homer_8.NRYTTCCGGH	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_8.NRYTTCCGGH	homer_9.MACAGGAAGT	0.827435	0.676992	0.744691	0.744691	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_8.NRYTTCCGGH	homer_10.ACTTCCKGKT	0.922386	0.754679	0.830147	0.830147	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_8.NRYTTCCGGH	homer_11.ACVAGGAAGT	0.840745	0.687882	0.756670	0.756670	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_8.NRYTTCCGGH	homer_12.YCTTATCTBN	0.358385	0.293224	0.322546	0.322546	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_8.NRYTTCCGGH	homer_13.NBWGATAAGR	0.366181	0.299603	0.329563	0.329563	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_8.NRYTTCCGGH	homer_14.TGGCAGTTGG	0.327183	0.218122	0.261747	0.261747	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_8.NRYTTCCGGH	homer_15.AVCCGGAAGT	0.919202	0.752074	0.827282	0.827282	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_8.NRYTTCCGGH	homer_16.ANCAGGAAGT	0.846142	0.692298	0.761527	0.761527	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_8.NRYTTCCGGH	homer_17.SAGATAAGRV	0.365210	0.243473	0.292168	0.292168	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_8.NRYTTCCGGH	homer_18.TGCTGAGTCA	0.252681	0.252681	0.252681	0.252681	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_8.NRYTTCCGGH	homer_19.GCTATTTTTAGC	0.279349	0.232790	0.279349	0.232790	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_8.NRYTTCCGGH	homer_20.GGCVGTTR	0.345193	0.276155	0.276155	0.345193	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_8.NRYTTCCGGH	homer_21.CYTGGCABNSTGCCAR	0.496900	0.310563	0.496900	0.310563	10	16	10	16	0.625000	1.000000	0.625000	R	-6	49
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_8.NRYTTCCGGH	homer_22.BBCTTATCTS	0.359147	0.239432	0.287318	0.287318	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_8.NRYTTCCGGH	homer_23.VACAGGAAAT	0.868796	0.710833	0.781917	0.781917	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_8.NRYTTCCGGH	homer_24.RGKGGGCGKGGC	0.365139	0.304282	0.365139	0.304282	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_8.NRYTTCCGGH	homer_25.AGATAASR	0.383855	0.244271	0.268698	0.335873	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_8.NRYTTCCGGH	homer_26.YGGCCCCGCCCC	0.421589	0.351324	0.421589	0.351324	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_8.NRYTTCCGGH	homer_27.AVCAGGAAGT	0.918295	0.751333	0.826466	0.826466	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_8.NRYTTCCGGH	homer_28.RGKGGGCGGAGC	0.507483	0.289990	0.405986	0.338322	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_8.NRYTTCCGGH	homer_29.AWWWTGCTGAGTCAT	0.350560	0.233707	0.350560	0.233707	10	15	10	15	0.666667	1.000000	0.666667	D	0	47
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_8.NRYTTCCGGH	homer_30.CAAAGGTCAG	0.299976	0.245435	0.269978	0.269978	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_8.NRYTTCCGGH	homer_31.VTGACTCATC	0.228727	0.187140	0.205854	0.205854	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_8.NRYTTCCGGH	homer_32.AAAGRGGAAGTG	0.803143	0.669286	0.803143	0.669286	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_8.NRYTTCCGGH	homer_33.GRAASTGAAAST	0.590175	0.408583	0.531158	0.442632	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_8.NRYTTCCGGH	homer_34.CCCCTCCCCCAC	0.419915	0.349929	0.419915	0.349929	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_8.NRYTTCCGGH	homer_35.GAAAGTGAAAGT	0.540177	0.373968	0.486159	0.405132	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_8.NRYTTCCGGH	homer_36.DATGASTCATHN	0.209580	0.174650	0.209580	0.174650	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_8.NRYTTCCGGH	homer_37.NDATGASTCAYN	0.199814	0.138333	0.179832	0.149860	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_8.NRYTTCCGGH	homer_38.RATGASTCAT	0.191627	0.156786	0.172465	0.172465	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_8.NRYTTCCGGH	homer_39.DATGASTCAT	0.189389	0.154955	0.170450	0.170450	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_8.NRYTTCCGGH	homer_40.AGTTTCAKTTTC	0.477275	0.397729	0.477275	0.397729	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_8.NRYTTCCGGH	homer_41.NNATGASTCATH	0.183735	0.153113	0.183735	0.153113	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_8.NRYTTCCGGH	homer_42.SAAACCACAG	0.275366	0.225300	0.247830	0.247830	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_8.NRYTTCCGGH	homer_43.GAAASYGAAASY	0.596636	0.413056	0.536973	0.447477	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_8.NRYTTCCGGH	homer_44.AVCAGCTG	0.325871	0.260697	0.260697	0.325871	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_8.NRYTTCCGGH	homer_45.SGTCACGTGR	0.205965	0.137310	0.164772	0.164772	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_8.NRYTTCCGGH	homer_46.NATGASTCABNN	0.167390	0.139492	0.167390	0.139492	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_8.NRYTTCCGGH	homer_47.GATGASTCATCN	0.218726	0.182272	0.218726	0.182272	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_8.NRYTTCCGGH	homer_48.AGTTTCASTTTC	0.445225	0.371021	0.445225	0.371021	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_8.NRYTTCCGGH	homer_49.RCAGGATGTGGT	0.746415	0.622012	0.746415	0.622012	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_8.NRYTTCCGGH	homer_50.GGGGGAATCCCC	0.520696	0.433913	0.520696	0.433913	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_8.NRYTTCCGGH	homer_51.GCTGTGGTTW	0.260125	0.173417	0.208100	0.208100	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_8.NRYTTCCGGH	homer_52.GGATGACTCATC	0.228362	0.190301	0.228362	0.190301	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_8.NRYTTCCGGH	homer_53.NWAACCACADNN	0.283462	0.196243	0.255116	0.212597	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_8.NRYTTCCGGH	homer_54.ACCATCTGTT	0.380261	0.380261	0.380261	0.380261	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_8.NRYTTCCGGH	homer_55.SVYTTCCNGGAARB	0.750363	0.535974	0.750363	0.535974	10	14	10	14	0.714286	1.000000	0.714286	D	0	45
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_8.NRYTTCCGGH	homer_56.SCCTAGCAACAG	0.355515	0.296263	0.355515	0.296263	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_8.NRYTTCCGGH	homer_57.AAACCACARM	0.288038	0.192026	0.230431	0.230431	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_8.NRYTTCCGGH	homer_58.RTTATGYAAB	0.325373	0.216915	0.260298	0.260298	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_8.NRYTTCCGGH	homer_59.NYTTCCWGGAAR	0.741321	0.513222	0.667189	0.555991	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_8.NRYTTCCGGH	homer_60.ASWTCCTGBT	0.868687	0.710744	0.781818	0.781818	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_8.NRYTTCCGGH	homer_61.DGGGYGKGGC	0.395354	0.263569	0.316283	0.316283	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_8.NRYTTCCGGH	homer_62.TWGTCTGV	0.252097	0.201678	0.201678	0.252097	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_8.NRYTTCCGGH	homer_63.CTGGCAGSCTGCCA	0.532213	0.319328	0.478992	0.342137	10	14	9	15	0.600000	0.900000	0.642857	R	-5	45
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_8.NRYTTCCGGH	homer_64.VGGGRATTYCCC	0.542060	0.375273	0.487854	0.406545	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_8.NRYTTCCGGH	homer_65.CARRGKBCAAAGTYCA	0.260790	0.115907	0.208632	0.130395	10	16	8	18	0.444444	0.800000	0.500000	D	-8	49
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_8.NRYTTCCGGH	homer_66.CCATTGTTNY	0.187695	0.187695	0.187695	0.187695	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_8.NRYTTCCGGH	homer_67.CYAAAAATAG	0.361274	0.295588	0.325147	0.325147	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_8.NRYTTCCGGH	homer_68.GGGGGGGG	0.452059	0.287674	0.316441	0.395551	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_8.NRYTTCCGGH	homer_69.TTGAMCTTTG	0.252717	0.206768	0.227445	0.227445	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_8.NRYTTCCGGH	homer_70.MGGAAGTGAAAC	0.815875	0.466214	0.652700	0.543917	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_8.NRYTTCCGGH	homer_71.HACTTCCGGY	0.967429	0.967429	0.967429	0.967429	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_8.NRYTTCCGGH	homer_72.NRYTTCCGGY	0.969998	0.969998	0.969998	0.969998	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_8.NRYTTCCGGH	homer_73.AWWNTGCTGAGTCAT	0.344803	0.229869	0.344803	0.229869	10	15	10	15	0.666667	1.000000	0.666667	D	0	47
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_8.NRYTTCCGGH	homer_74.AGGCCTAG	0.299117	0.239294	0.239294	0.299117	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_8.NRYTTCCGGH	homer_75.VTTACGTAAYNNNNN	0.339092	0.226061	0.339092	0.226061	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_8.NRYTTCCGGH	homer_76.TGCTGACTCA	0.312601	0.312601	0.312601	0.312601	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_8.NRYTTCCGGH	homer_77.ATTGCGCAAC	0.389508	0.259672	0.311606	0.311606	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_9.MACAGGAAGT	homer_1.ATTTCCTGTN	0.894030	0.894030	0.894030	0.894030	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_9.MACAGGAAGT	homer_2.ACCGGAAGTG	0.840451	0.687642	0.756406	0.756406	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_9.MACAGGAAGT	homer_3.AACCGGAAGT	0.811643	0.811643	0.811643	0.811643	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_9.MACAGGAAGT	homer_4.ACAGGAAGTG	0.959136	0.784748	0.863223	0.863223	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_9.MACAGGAAGT	homer_5.RACCGGAAGT	0.880275	0.880275	0.880275	0.880275	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_9.MACAGGAAGT	homer_6.AGAGGAAGTG	0.875834	0.716591	0.788250	0.788250	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_9.MACAGGAAGT	homer_7.NNAYTTCCTGHN	0.893362	0.744469	0.893362	0.744469	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_9.MACAGGAAGT	homer_8.NRYTTCCGGH	0.827435	0.676992	0.744691	0.744691	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_9.MACAGGAAGT	homer_9.MACAGGAAGT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_9.MACAGGAAGT	homer_10.ACTTCCKGKT	0.879942	0.879942	0.879942	0.879942	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_9.MACAGGAAGT	homer_11.ACVAGGAAGT	0.800516	0.800516	0.800516	0.800516	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_9.MACAGGAAGT	homer_12.YCTTATCTBN	0.374574	0.201694	0.262202	0.262202	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_9.MACAGGAAGT	homer_13.NBWGATAAGR	0.326460	0.175786	0.228522	0.228522	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_9.MACAGGAAGT	homer_14.TGGCAGTTGG	0.419759	0.279840	0.335808	0.335808	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_9.MACAGGAAGT	homer_15.AVCCGGAAGT	0.783482	0.783482	0.783482	0.783482	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_9.MACAGGAAGT	homer_16.ANCAGGAAGT	0.884377	0.884377	0.884377	0.884377	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_9.MACAGGAAGT	homer_17.SAGATAAGRV	0.343134	0.228756	0.274507	0.274507	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_9.MACAGGAAGT	homer_18.TGCTGAGTCA	0.509748	0.274480	0.356824	0.356824	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_9.MACAGGAAGT	homer_19.GCTATTTTTAGC	0.265187	0.183591	0.238668	0.198890	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_9.MACAGGAAGT	homer_20.GGCVGTTR	0.538896	0.269448	0.323338	0.404172	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_9.MACAGGAAGT	homer_21.CYTGGCABNSTGCCAR	0.396124	0.209713	0.356512	0.222820	10	16	9	17	0.529412	0.900000	0.562500	D	1	49
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_9.MACAGGAAGT	homer_22.BBCTTATCTS	0.348672	0.232448	0.278937	0.278937	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_9.MACAGGAAGT	homer_23.VACAGGAAAT	0.942579	0.942579	0.942579	0.942579	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_9.MACAGGAAGT	homer_24.RGKGGGCGKGGC	0.336416	0.232903	0.302774	0.252312	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_9.MACAGGAAGT	homer_25.AGATAASR	0.305526	0.194426	0.213868	0.267335	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_9.MACAGGAAGT	homer_26.YGGCCCCGCCCC	0.177591	0.147992	0.177591	0.147992	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_9.MACAGGAAGT	homer_27.AVCAGGAAGT	0.857722	0.857722	0.857722	0.857722	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_9.MACAGGAAGT	homer_28.RGKGGGCGGAGC	0.251032	0.173791	0.225929	0.188274	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_9.MACAGGAAGT	homer_29.AWWWTGCTGAGTCAT	0.455612	0.303741	0.455612	0.303741	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_9.MACAGGAAGT	homer_30.CAAAGGTCAG	0.304094	0.304094	0.304094	0.304094	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_9.MACAGGAAGT	homer_31.VTGACTCATC	0.413610	0.177261	0.248166	0.248166	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_9.MACAGGAAGT	homer_32.AAAGRGGAAGTG	0.799993	0.666661	0.799993	0.666661	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_9.MACAGGAAGT	homer_33.GRAASTGAAAST	0.579621	0.483018	0.579621	0.483018	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_9.MACAGGAAGT	homer_34.CCCCTCCCCCAC	0.236101	0.196751	0.236101	0.196751	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_9.MACAGGAAGT	homer_35.GAAAGTGAAAGT	0.586343	0.488620	0.586343	0.488620	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_9.MACAGGAAGT	homer_36.DATGASTCATHN	0.307544	0.143521	0.215281	0.179401	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_9.MACAGGAAGT	homer_37.NDATGASTCAYN	0.330871	0.154406	0.231610	0.193008	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_9.MACAGGAAGT	homer_38.RATGASTCAT	0.174013	0.174013	0.174013	0.174013	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_9.MACAGGAAGT	homer_39.DATGASTCAT	0.160780	0.160780	0.160780	0.160780	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_9.MACAGGAAGT	homer_40.AGTTTCAKTTTC	0.560073	0.466728	0.560073	0.466728	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_9.MACAGGAAGT	homer_41.NNATGASTCATH	0.178712	0.148926	0.178712	0.148926	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_9.MACAGGAAGT	homer_42.SAAACCACAG	0.800300	0.266767	0.400150	0.400150	10	10	5	15	0.333333	0.500000	0.500000	D	-5	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_9.MACAGGAAGT	homer_43.GAAASYGAAASY	0.588565	0.490470	0.588565	0.490470	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_9.MACAGGAAGT	homer_44.AVCAGCTG	0.355295	0.284236	0.284236	0.355295	10	8	8	10	0.800000	0.800000	1.000000	D	0	33
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_9.MACAGGAAGT	homer_45.SGTCACGTGR	0.340168	0.278319	0.306151	0.306151	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_9.MACAGGAAGT	homer_46.NATGASTCABNN	0.339858	0.158600	0.237901	0.198251	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_9.MACAGGAAGT	homer_47.GATGASTCATCN	0.327860	0.153001	0.229502	0.191252	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_9.MACAGGAAGT	homer_48.AGTTTCASTTTC	0.563732	0.469776	0.563732	0.469776	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_9.MACAGGAAGT	homer_49.RCAGGATGTGGT	0.891177	0.616969	0.802059	0.668383	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_9.MACAGGAAGT	homer_50.GGGGGAATCCCC	0.379746	0.262901	0.341771	0.284809	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_9.MACAGGAAGT	homer_51.GCTGTGGTTW	0.711366	0.304871	0.426820	0.426820	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_9.MACAGGAAGT	homer_52.GGATGACTCATC	0.220238	0.152473	0.198214	0.165179	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_9.MACAGGAAGT	homer_53.NWAACCACADNN	0.588046	0.274421	0.411632	0.343027	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_9.MACAGGAAGT	homer_54.ACCATCTGTT	0.423173	0.423173	0.423173	0.423173	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_9.MACAGGAAGT	homer_55.SVYTTCCNGGAARB	0.614169	0.438692	0.614169	0.438692	10	14	10	14	0.714286	1.000000	0.714286	D	-4	45
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_9.MACAGGAAGT	homer_56.SCCTAGCAACAG	0.373845	0.311537	0.373845	0.311537	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_9.MACAGGAAGT	homer_57.AAACCACARM	0.612831	0.262642	0.367698	0.367698	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_9.MACAGGAAGT	homer_58.RTTATGYAAB	0.175670	0.175670	0.175670	0.175670	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_9.MACAGGAAGT	homer_59.NYTTCCWGGAAR	0.588692	0.490576	0.588692	0.490576	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_9.MACAGGAAGT	homer_60.ASWTCCTGBT	0.838162	0.838162	0.838162	0.838162	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_9.MACAGGAAGT	homer_61.DGGGYGKGGC	0.489986	0.263839	0.342990	0.342990	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_9.MACAGGAAGT	homer_62.TWGTCTGV	0.363290	0.290632	0.290632	0.363290	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_9.MACAGGAAGT	homer_63.CTGGCAGSCTGCCA	0.528901	0.264451	0.423121	0.302229	10	14	8	16	0.500000	0.800000	0.571429	D	2	45
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_9.MACAGGAAGT	homer_64.VGGGRATTYCCC	0.492013	0.281150	0.393610	0.328008	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_9.MACAGGAAGT	homer_65.CARRGKBCAAAGTYCA	0.297063	0.157269	0.267357	0.167098	10	16	9	17	0.529412	0.900000	0.562500	D	-7	49
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_9.MACAGGAAGT	homer_66.CCATTGTTNY	0.267483	0.267483	0.267483	0.267483	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_9.MACAGGAAGT	homer_67.CYAAAAATAG	0.395778	0.263852	0.316622	0.316622	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_9.MACAGGAAGT	homer_68.GGGGGGGG	0.467922	0.233961	0.280753	0.350941	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_9.MACAGGAAGT	homer_69.TTGAMCTTTG	0.252579	0.252579	0.252579	0.252579	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_9.MACAGGAAGT	homer_70.MGGAAGTGAAAC	0.874208	0.407964	0.611946	0.509955	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_9.MACAGGAAGT	homer_71.HACTTCCGGY	0.792039	0.648032	0.712835	0.712835	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_9.MACAGGAAGT	homer_72.NRYTTCCGGY	0.765871	0.626621	0.689283	0.689283	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_9.MACAGGAAGT	homer_73.AWWNTGCTGAGTCAT	0.470156	0.313438	0.470156	0.313438	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_9.MACAGGAAGT	homer_74.AGGCCTAG	0.305697	0.244558	0.244558	0.305697	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_9.MACAGGAAGT	homer_75.VTTACGTAAYNNNNN	0.404589	0.190395	0.323671	0.215781	10	15	8	17	0.470588	0.800000	0.533333	D	-7	47
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_9.MACAGGAAGT	homer_76.TGCTGACTCA	0.510174	0.274709	0.357122	0.357122	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_9.MACAGGAAGT	homer_77.ATTGCGCAAC	0.841984	0.148585	0.252595	0.252595	10	10	3	17	0.176471	0.300000	0.300000	D	-7	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_10.ACTTCCKGKT	homer_1.ATTTCCTGTN	0.811547	0.811547	0.811547	0.811547	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_10.ACTTCCKGKT	homer_2.ACCGGAAGTG	0.949009	0.776462	0.854108	0.854108	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_10.ACTTCCKGKT	homer_3.AACCGGAAGT	0.945198	0.945198	0.945198	0.945198	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_10.ACTTCCKGKT	homer_4.ACAGGAAGTG	0.965806	0.790205	0.869226	0.869226	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_10.ACTTCCKGKT	homer_5.RACCGGAAGT	0.965170	0.965170	0.965170	0.965170	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_10.ACTTCCKGKT	homer_6.AGAGGAAGTG	0.908400	0.743236	0.817560	0.817560	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_10.ACTTCCKGKT	homer_7.NNAYTTCCTGHN	0.924412	0.770344	0.924412	0.770344	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_10.ACTTCCKGKT	homer_8.NRYTTCCGGH	0.922386	0.754679	0.830147	0.830147	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_10.ACTTCCKGKT	homer_9.MACAGGAAGT	0.879942	0.879942	0.879942	0.879942	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_10.ACTTCCKGKT	homer_10.ACTTCCKGKT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_10.ACTTCCKGKT	homer_11.ACVAGGAAGT	0.951369	0.951369	0.951369	0.951369	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_10.ACTTCCKGKT	homer_12.YCTTATCTBN	0.202464	0.202464	0.202464	0.202464	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_10.ACTTCCKGKT	homer_13.NBWGATAAGR	0.167457	0.167457	0.167457	0.167457	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_10.ACTTCCKGKT	homer_14.TGGCAGTTGG	0.544170	0.293014	0.380919	0.380919	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_10.ACTTCCKGKT	homer_15.AVCCGGAAGT	0.948943	0.948943	0.948943	0.948943	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_10.ACTTCCKGKT	homer_16.ANCAGGAAGT	0.948561	0.948561	0.948561	0.948561	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_10.ACTTCCKGKT	homer_17.SAGATAAGRV	0.386150	0.207927	0.270305	0.270305	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_10.ACTTCCKGKT	homer_18.TGCTGAGTCA	0.345665	0.186127	0.241966	0.241966	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_10.ACTTCCKGKT	homer_19.GCTATTTTTAGC	0.290793	0.201318	0.261714	0.218095	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_10.ACTTCCKGKT	homer_20.GGCVGTTR	0.554618	0.277309	0.332771	0.415964	10	8	6	12	0.500000	0.600000	0.750000	R	-2	33
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_10.ACTTCCKGKT	homer_21.CYTGGCABNSTGCCAR	0.456772	0.241820	0.411094	0.256934	10	16	9	17	0.529412	0.900000	0.562500	R	-7	49
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_10.ACTTCCKGKT	homer_22.BBCTTATCTS	0.367388	0.197824	0.257172	0.257172	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_10.ACTTCCKGKT	homer_23.VACAGGAAAT	0.866237	0.866237	0.866237	0.866237	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_10.ACTTCCKGKT	homer_24.RGKGGGCGKGGC	0.417832	0.289268	0.376049	0.313374	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_10.ACTTCCKGKT	homer_25.AGATAASR	0.674860	0.192817	0.269944	0.337430	10	8	4	14	0.285714	0.400000	0.500000	R	6	33
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_10.ACTTCCKGKT	homer_26.YGGCCCCGCCCC	0.281478	0.234565	0.281478	0.234565	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_10.ACTTCCKGKT	homer_27.AVCAGGAAGT	0.977106	0.977106	0.977106	0.977106	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_10.ACTTCCKGKT	homer_28.RGKGGGCGGAGC	0.348405	0.241203	0.313564	0.261304	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_10.ACTTCCKGKT	homer_29.AWWWTGCTGAGTCAT	0.316125	0.210750	0.316125	0.210750	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_10.ACTTCCKGKT	homer_30.CAAAGGTCAG	0.267590	0.218937	0.240831	0.240831	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_10.ACTTCCKGKT	homer_31.VTGACTCATC	0.204511	0.167327	0.184060	0.184060	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_10.ACTTCCKGKT	homer_32.AAAGRGGAAGTG	0.900348	0.750290	0.900348	0.750290	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_10.ACTTCCKGKT	homer_33.GRAASTGAAAST	0.632031	0.526693	0.632031	0.526693	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_10.ACTTCCKGKT	homer_34.CCCCTCCCCCAC	0.390827	0.325689	0.390827	0.325689	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_10.ACTTCCKGKT	homer_35.GAAAGTGAAAGT	0.613722	0.511435	0.613722	0.511435	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_10.ACTTCCKGKT	homer_36.DATGASTCATHN	0.173646	0.144705	0.173646	0.144705	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_10.ACTTCCKGKT	homer_37.NDATGASTCAYN	0.185868	0.154890	0.185868	0.154890	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_10.ACTTCCKGKT	homer_38.RATGASTCAT	0.197858	0.197858	0.197858	0.197858	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_10.ACTTCCKGKT	homer_39.DATGASTCAT	0.184002	0.184002	0.184002	0.184002	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_10.ACTTCCKGKT	homer_40.AGTTTCAKTTTC	0.582915	0.485762	0.582915	0.485762	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_10.ACTTCCKGKT	homer_41.NNATGASTCATH	0.195362	0.162802	0.195362	0.162802	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_10.ACTTCCKGKT	homer_42.SAAACCACAG	0.300158	0.200106	0.240127	0.240127	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_10.ACTTCCKGKT	homer_43.GAAASYGAAASY	0.637042	0.530869	0.637042	0.530869	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_10.ACTTCCKGKT	homer_44.AVCAGCTG	0.389938	0.248142	0.272957	0.341196	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_10.ACTTCCKGKT	homer_45.SGTCACGTGR	0.286642	0.191094	0.229313	0.229313	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_10.ACTTCCKGKT	homer_46.NATGASTCABNN	0.217135	0.180946	0.217135	0.180946	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_10.ACTTCCKGKT	homer_47.GATGASTCATCN	0.161701	0.134751	0.161701	0.134751	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_10.ACTTCCKGKT	homer_48.AGTTTCASTTTC	0.583245	0.486037	0.583245	0.486037	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_10.ACTTCCKGKT	homer_49.RCAGGATGTGGT	0.860776	0.595922	0.774698	0.645582	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_10.ACTTCCKGKT	homer_50.GGGGGAATCCCC	0.495761	0.343219	0.446185	0.371821	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_10.ACTTCCKGKT	homer_51.GCTGTGGTTW	0.219072	0.179241	0.197165	0.197165	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_10.ACTTCCKGKT	homer_52.GGATGACTCATC	0.184340	0.153617	0.184340	0.153617	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_10.ACTTCCKGKT	homer_53.NWAACCACADNN	0.223265	0.186054	0.223265	0.186054	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_10.ACTTCCKGKT	homer_54.ACCATCTGTT	0.334958	0.274057	0.301462	0.301462	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_10.ACTTCCKGKT	homer_55.SVYTTCCNGGAARB	0.721256	0.515183	0.721256	0.515183	10	14	10	14	0.714286	1.000000	0.714286	R	0	45
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_10.ACTTCCKGKT	homer_56.SCCTAGCAACAG	0.352080	0.293400	0.352080	0.293400	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_10.ACTTCCKGKT	homer_57.AAACCACARM	0.269753	0.220707	0.242777	0.242777	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_10.ACTTCCKGKT	homer_58.RTTATGYAAB	0.331680	0.271375	0.298512	0.298512	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_10.ACTTCCKGKT	homer_59.NYTTCCWGGAAR	0.693030	0.577525	0.693030	0.577525	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_10.ACTTCCKGKT	homer_60.ASWTCCTGBT	0.845968	0.845968	0.845968	0.845968	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_10.ACTTCCKGKT	homer_61.DGGGYGKGGC	0.473952	0.255205	0.331766	0.331766	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_10.ACTTCCKGKT	homer_62.TWGTCTGV	0.219513	0.175610	0.175610	0.219513	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_10.ACTTCCKGKT	homer_63.CTGGCAGSCTGCCA	0.523353	0.261677	0.418683	0.299059	10	14	8	16	0.500000	0.800000	0.571429	R	-6	45
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_10.ACTTCCKGKT	homer_64.VGGGRATTYCCC	0.540211	0.308692	0.432169	0.360140	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_10.ACTTCCKGKT	homer_65.CARRGKBCAAAGTYCA	0.349785	0.218615	0.349785	0.218615	10	16	10	16	0.625000	1.000000	0.625000	R	-3	49
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_10.ACTTCCKGKT	homer_66.CCATTGTTNY	0.251988	0.206172	0.226789	0.226789	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_10.ACTTCCKGKT	homer_67.CYAAAAATAG	0.394515	0.263010	0.315612	0.315612	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_10.ACTTCCKGKT	homer_68.GGGGGGGG	0.538713	0.269357	0.323228	0.404035	10	8	6	12	0.500000	0.600000	0.750000	R	4	33
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_10.ACTTCCKGKT	homer_69.TTGAMCTTTG	0.498035	0.213443	0.298821	0.298821	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_10.ACTTCCKGKT	homer_70.MGGAAGTGAAAC	0.957852	0.446998	0.670497	0.558747	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_10.ACTTCCKGKT	homer_71.HACTTCCGGY	0.934110	0.764272	0.840699	0.840699	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_10.ACTTCCKGKT	homer_72.NRYTTCCGGY	0.891480	0.729393	0.802332	0.802332	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_10.ACTTCCKGKT	homer_73.AWWNTGCTGAGTCAT	0.316472	0.210981	0.316472	0.210981	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_10.ACTTCCKGKT	homer_74.AGGCCTAG	0.278427	0.222742	0.222742	0.278427	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_10.ACTTCCKGKT	homer_75.VTTACGTAAYNNNNN	0.302004	0.201336	0.302004	0.201336	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_10.ACTTCCKGKT	homer_76.TGCTGACTCA	0.325312	0.266164	0.292780	0.292780	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_10.ACTTCCKGKT	homer_77.ATTGCGCAAC	0.370191	0.302883	0.333172	0.333172	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_11.ACVAGGAAGT	homer_1.ATTTCCTGTN	0.741880	0.741880	0.741880	0.741880	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_11.ACVAGGAAGT	homer_2.ACCGGAAGTG	0.853458	0.698284	0.768112	0.768112	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_11.ACVAGGAAGT	homer_3.AACCGGAAGT	0.854795	0.854795	0.854795	0.854795	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_11.ACVAGGAAGT	homer_4.ACAGGAAGTG	0.922517	0.754786	0.830265	0.830265	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_11.ACVAGGAAGT	homer_5.RACCGGAAGT	0.860698	0.860698	0.860698	0.860698	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_11.ACVAGGAAGT	homer_6.AGAGGAAGTG	0.915511	0.749054	0.823960	0.823960	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_11.ACVAGGAAGT	homer_7.NNAYTTCCTGHN	0.841878	0.701565	0.841878	0.701565	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_11.ACVAGGAAGT	homer_8.NRYTTCCGGH	0.840745	0.687882	0.756670	0.756670	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_11.ACVAGGAAGT	homer_9.MACAGGAAGT	0.800516	0.800516	0.800516	0.800516	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_11.ACVAGGAAGT	homer_10.ACTTCCKGKT	0.951369	0.951369	0.951369	0.951369	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_11.ACVAGGAAGT	homer_11.ACVAGGAAGT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_11.ACVAGGAAGT	homer_12.YCTTATCTBN	0.584360	0.250440	0.350616	0.350616	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_11.ACVAGGAAGT	homer_13.NBWGATAAGR	0.548278	0.234976	0.328967	0.328967	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_11.ACVAGGAAGT	homer_14.TGGCAGTTGG	0.586160	0.315624	0.410312	0.410312	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_11.ACVAGGAAGT	homer_15.AVCCGGAAGT	0.862129	0.862129	0.862129	0.862129	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_11.ACVAGGAAGT	homer_16.ANCAGGAAGT	0.969470	0.969470	0.969470	0.969470	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_11.ACVAGGAAGT	homer_17.SAGATAAGRV	0.553675	0.298133	0.387573	0.387573	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_11.ACVAGGAAGT	homer_18.TGCTGAGTCA	0.238924	0.195483	0.215031	0.215031	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_11.ACVAGGAAGT	homer_19.GCTATTTTTAGC	0.287667	0.199154	0.258900	0.215750	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_11.ACVAGGAAGT	homer_20.GGCVGTTR	0.600327	0.300163	0.360196	0.450245	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_11.ACVAGGAAGT	homer_21.CYTGGCABNSTGCCAR	0.424195	0.224574	0.381776	0.238610	10	16	9	17	0.529412	0.900000	0.562500	D	1	49
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_11.ACVAGGAAGT	homer_22.BBCTTATCTS	0.540356	0.290961	0.378249	0.378249	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_11.ACVAGGAAGT	homer_23.VACAGGAAAT	0.764316	0.764316	0.764316	0.764316	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_11.ACVAGGAAGT	homer_24.RGKGGGCGKGGC	0.418298	0.289591	0.376468	0.313723	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_11.ACVAGGAAGT	homer_25.AGATAASR	0.464315	0.232157	0.278589	0.348236	10	8	6	12	0.500000	0.600000	0.750000	D	-2	33
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_11.ACVAGGAAGT	homer_26.YGGCCCCGCCCC	0.208460	0.173717	0.208460	0.173717	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_11.ACVAGGAAGT	homer_27.AVCAGGAAGT	0.961928	0.961928	0.961928	0.961928	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_11.ACVAGGAAGT	homer_28.RGKGGGCGGAGC	0.259828	0.216523	0.259828	0.216523	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_11.ACVAGGAAGT	homer_29.AWWWTGCTGAGTCAT	0.342188	0.228125	0.342188	0.228125	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_11.ACVAGGAAGT	homer_30.CAAAGGTCAG	0.274518	0.224606	0.247066	0.247066	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_11.ACVAGGAAGT	homer_31.VTGACTCATC	0.278533	0.227890	0.250679	0.250679	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_11.ACVAGGAAGT	homer_32.AAAGRGGAAGTG	0.888497	0.740414	0.888497	0.740414	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_11.ACVAGGAAGT	homer_33.GRAASTGAAAST	0.607568	0.506306	0.607568	0.506306	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_11.ACVAGGAAGT	homer_34.CCCCTCCCCCAC	0.343524	0.286270	0.343524	0.286270	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_11.ACVAGGAAGT	homer_35.GAAAGTGAAAGT	0.599964	0.499970	0.599964	0.499970	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_11.ACVAGGAAGT	homer_36.DATGASTCATHN	0.243022	0.202518	0.243022	0.202518	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_11.ACVAGGAAGT	homer_37.NDATGASTCAYN	0.250985	0.209154	0.250985	0.209154	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_11.ACVAGGAAGT	homer_38.RATGASTCAT	0.258741	0.258741	0.258741	0.258741	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_11.ACVAGGAAGT	homer_39.DATGASTCAT	0.250208	0.250208	0.250208	0.250208	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_11.ACVAGGAAGT	homer_40.AGTTTCAKTTTC	0.559317	0.466098	0.559317	0.466098	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_11.ACVAGGAAGT	homer_41.NNATGASTCATH	0.264312	0.220260	0.264312	0.220260	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_11.ACVAGGAAGT	homer_42.SAAACCACAG	0.293777	0.158188	0.205644	0.205644	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_11.ACVAGGAAGT	homer_43.GAAASYGAAASY	0.594106	0.495089	0.594106	0.495089	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_11.ACVAGGAAGT	homer_44.AVCAGCTG	0.405730	0.258192	0.284011	0.355013	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_11.ACVAGGAAGT	homer_45.SGTCACGTGR	0.347213	0.231476	0.277771	0.277771	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_11.ACVAGGAAGT	homer_46.NATGASTCABNN	0.278033	0.231694	0.278033	0.231694	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_11.ACVAGGAAGT	homer_47.GATGASTCATCN	0.228004	0.190003	0.228004	0.190003	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_11.ACVAGGAAGT	homer_48.AGTTTCASTTTC	0.559121	0.465934	0.559121	0.465934	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_11.ACVAGGAAGT	homer_49.RCAGGATGTGGT	0.866561	0.599927	0.779905	0.649921	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_11.ACVAGGAAGT	homer_50.GGGGGAATCCCC	0.451921	0.312869	0.406729	0.338941	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_11.ACVAGGAAGT	homer_51.GCTGTGGTTW	0.282590	0.188394	0.226072	0.226072	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_11.ACVAGGAAGT	homer_52.GGATGACTCATC	0.250492	0.208744	0.250492	0.208744	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_11.ACVAGGAAGT	homer_53.NWAACCACADNN	0.247116	0.171080	0.222404	0.185337	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_11.ACVAGGAAGT	homer_54.ACCATCTGTT	0.295547	0.241811	0.265992	0.265992	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_11.ACVAGGAAGT	homer_55.SVYTTCCNGGAARB	0.631477	0.451055	0.631477	0.451055	10	14	10	14	0.714286	1.000000	0.714286	R	-3	45
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_11.ACVAGGAAGT	homer_56.SCCTAGCAACAG	0.302298	0.251915	0.302298	0.251915	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_11.ACVAGGAAGT	homer_57.AAACCACARM	0.302456	0.201637	0.241965	0.241965	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_11.ACVAGGAAGT	homer_58.RTTATGYAAB	0.311247	0.254656	0.280122	0.280122	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_11.ACVAGGAAGT	homer_59.NYTTCCWGGAAR	0.619760	0.516466	0.619760	0.516466	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_11.ACVAGGAAGT	homer_60.ASWTCCTGBT	0.799447	0.799447	0.799447	0.799447	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_11.ACVAGGAAGT	homer_61.DGGGYGKGGC	0.484858	0.261077	0.339401	0.339401	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_11.ACVAGGAAGT	homer_62.TWGTCTGV	0.223190	0.178552	0.178552	0.223190	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_11.ACVAGGAAGT	homer_63.CTGGCAGSCTGCCA	0.462690	0.231345	0.370152	0.264394	10	14	8	16	0.500000	0.800000	0.571429	D	2	45
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_11.ACVAGGAAGT	homer_64.VGGGRATTYCCC	0.541771	0.309584	0.433417	0.361181	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_11.ACVAGGAAGT	homer_65.CARRGKBCAAAGTYCA	0.383010	0.239381	0.383010	0.239381	10	16	10	16	0.625000	1.000000	0.625000	D	-3	49
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_11.ACVAGGAAGT	homer_66.CCATTGTTNY	0.221022	0.221022	0.221022	0.221022	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_11.ACVAGGAAGT	homer_67.CYAAAAATAG	0.384674	0.256449	0.307739	0.307739	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_11.ACVAGGAAGT	homer_68.GGGGGGGG	0.453944	0.226972	0.272366	0.340458	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_11.ACVAGGAAGT	homer_69.TTGAMCTTTG	0.543504	0.232930	0.326102	0.326102	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_11.ACVAGGAAGT	homer_70.MGGAAGTGAAAC	0.953255	0.444852	0.667278	0.556065	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_11.ACVAGGAAGT	homer_71.HACTTCCGGY	0.843998	0.690544	0.759598	0.759598	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_11.ACVAGGAAGT	homer_72.NRYTTCCGGY	0.794602	0.650129	0.715142	0.715142	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_11.ACVAGGAAGT	homer_73.AWWNTGCTGAGTCAT	0.311559	0.207706	0.311559	0.207706	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_11.ACVAGGAAGT	homer_74.AGGCCTAG	0.313314	0.250651	0.250651	0.313314	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_11.ACVAGGAAGT	homer_75.VTTACGTAAYNNNNN	0.256703	0.171135	0.256703	0.171135	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_11.ACVAGGAAGT	homer_76.TGCTGACTCA	0.331211	0.270991	0.298090	0.298090	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_11.ACVAGGAAGT	homer_77.ATTGCGCAAC	0.327646	0.268074	0.294881	0.294881	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_12.YCTTATCTBN	homer_1.ATTTCCTGTN	0.376777	0.308272	0.339099	0.339099	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_12.YCTTATCTBN	homer_2.ACCGGAAGTG	0.252161	0.206314	0.226945	0.226945	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_12.YCTTATCTBN	homer_3.AACCGGAAGT	0.165357	0.165357	0.165357	0.165357	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_12.YCTTATCTBN	homer_4.ACAGGAAGTG	0.241218	0.197360	0.217096	0.217096	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_12.YCTTATCTBN	homer_5.RACCGGAAGT	0.145021	0.145021	0.145021	0.145021	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_12.YCTTATCTBN	homer_6.AGAGGAAGTG	0.319331	0.212887	0.255465	0.255465	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_12.YCTTATCTBN	homer_7.NNAYTTCCTGHN	0.371239	0.309366	0.371239	0.309366	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_12.YCTTATCTBN	homer_8.NRYTTCCGGH	0.358385	0.293224	0.322546	0.322546	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_12.YCTTATCTBN	homer_9.MACAGGAAGT	0.374574	0.201694	0.262202	0.262202	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_12.YCTTATCTBN	homer_10.ACTTCCKGKT	0.202464	0.202464	0.202464	0.202464	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_12.YCTTATCTBN	homer_11.ACVAGGAAGT	0.584360	0.250440	0.350616	0.350616	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_12.YCTTATCTBN	homer_12.YCTTATCTBN	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_12.YCTTATCTBN	homer_13.NBWGATAAGR	0.989184	0.989184	0.989184	0.989184	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_12.YCTTATCTBN	homer_14.TGGCAGTTGG	0.398925	0.265950	0.319140	0.319140	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_12.YCTTATCTBN	homer_15.AVCCGGAAGT	0.171509	0.171509	0.171509	0.171509	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_12.YCTTATCTBN	homer_16.ANCAGGAAGT	0.597317	0.255993	0.358390	0.358390	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_12.YCTTATCTBN	homer_17.SAGATAAGRV	0.992454	0.812008	0.893209	0.893209	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_12.YCTTATCTBN	homer_18.TGCTGAGTCA	0.423076	0.282051	0.338461	0.338461	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_12.YCTTATCTBN	homer_19.GCTATTTTTAGC	0.450300	0.311746	0.405270	0.337725	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_12.YCTTATCTBN	homer_20.GGCVGTTR	0.463611	0.295025	0.324527	0.405659	10	8	7	11	0.636364	0.700000	0.875000	R	3	33
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_12.YCTTATCTBN	homer_21.CYTGGCABNSTGCCAR	0.312432	0.165405	0.281188	0.175743	10	16	9	17	0.529412	0.900000	0.562500	D	1	49
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_12.YCTTATCTBN	homer_22.BBCTTATCTS	0.996150	0.815032	0.896535	0.896535	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_12.YCTTATCTBN	homer_23.VACAGGAAAT	0.329066	0.269235	0.296159	0.296159	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_12.YCTTATCTBN	homer_24.RGKGGGCGKGGC	0.473625	0.074783	0.142088	0.118406	10	12	3	19	0.157895	0.300000	0.250000	R	-9	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_12.YCTTATCTBN	homer_25.AGATAASR	0.960197	0.768158	0.768158	0.960197	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_12.YCTTATCTBN	homer_26.YGGCCCCGCCCC	0.614997	0.061500	0.122999	0.102499	10	12	2	20	0.100000	0.200000	0.166667	D	-10	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_12.YCTTATCTBN	homer_27.AVCAGGAAGT	0.265452	0.217188	0.238907	0.238907	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_12.YCTTATCTBN	homer_28.RGKGGGCGGAGC	0.138695	0.115579	0.138695	0.115579	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_12.YCTTATCTBN	homer_29.AWWWTGCTGAGTCAT	0.420444	0.280296	0.420444	0.280296	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_12.YCTTATCTBN	homer_30.CAAAGGTCAG	0.447445	0.366092	0.402701	0.402701	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_12.YCTTATCTBN	homer_31.VTGACTCATC	0.451416	0.243070	0.315991	0.315991	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_12.YCTTATCTBN	homer_32.AAAGRGGAAGTG	0.271403	0.226169	0.271403	0.226169	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_12.YCTTATCTBN	homer_33.GRAASTGAAAST	0.414569	0.287009	0.373112	0.310927	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_12.YCTTATCTBN	homer_34.CCCCTCCCCCAC	0.192730	0.160608	0.192730	0.160608	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_12.YCTTATCTBN	homer_35.GAAAGTGAAAGT	0.381765	0.264299	0.343589	0.286324	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_12.YCTTATCTBN	homer_36.DATGASTCATHN	0.391436	0.223678	0.313149	0.260957	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_12.YCTTATCTBN	homer_37.NDATGASTCAYN	0.376623	0.215213	0.301299	0.251082	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_12.YCTTATCTBN	homer_38.RATGASTCAT	0.430399	0.231753	0.301279	0.301279	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_12.YCTTATCTBN	homer_39.DATGASTCAT	0.412863	0.222311	0.289004	0.289004	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_12.YCTTATCTBN	homer_40.AGTTTCAKTTTC	0.323391	0.223886	0.291052	0.242543	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_12.YCTTATCTBN	homer_41.NNATGASTCATH	0.399776	0.228443	0.319821	0.266517	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_12.YCTTATCTBN	homer_42.SAAACCACAG	0.279515	0.228694	0.251564	0.251564	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_12.YCTTATCTBN	homer_43.GAAASYGAAASY	0.319747	0.221364	0.287773	0.239811	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_12.YCTTATCTBN	homer_44.AVCAGCTG	0.398294	0.253460	0.278806	0.348508	10	8	7	11	0.636364	0.700000	0.875000	R	3	33
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_12.YCTTATCTBN	homer_45.SGTCACGTGR	0.310379	0.167127	0.217265	0.217265	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_12.YCTTATCTBN	homer_46.NATGASTCABNN	0.374351	0.213915	0.299481	0.249568	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_12.YCTTATCTBN	homer_47.GATGASTCATCN	0.393345	0.224769	0.314676	0.262230	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_12.YCTTATCTBN	homer_48.AGTTTCASTTTC	0.371743	0.257361	0.334569	0.278807	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_12.YCTTATCTBN	homer_49.RCAGGATGTGGT	0.330261	0.275217	0.330261	0.275217	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_12.YCTTATCTBN	homer_50.GGGGGAATCCCC	0.195777	0.135538	0.176199	0.146833	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_12.YCTTATCTBN	homer_51.GCTGTGGTTW	0.292446	0.194964	0.233957	0.233957	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_12.YCTTATCTBN	homer_52.GGATGACTCATC	0.405774	0.231871	0.324619	0.270516	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_12.YCTTATCTBN	homer_53.NWAACCACADNN	0.251767	0.174300	0.226590	0.188825	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_12.YCTTATCTBN	homer_54.ACCATCTGTT	0.433284	0.354505	0.389955	0.389955	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_12.YCTTATCTBN	homer_55.SVYTTCCNGGAARB	0.272159	0.194399	0.272159	0.194399	10	14	10	14	0.714286	1.000000	0.714286	R	0	45
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_12.YCTTATCTBN	homer_56.SCCTAGCAACAG	0.332903	0.277419	0.332903	0.277419	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_12.YCTTATCTBN	homer_57.AAACCACARM	0.232104	0.154736	0.185683	0.185683	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_12.YCTTATCTBN	homer_58.RTTATGYAAB	0.487956	0.399237	0.439161	0.439161	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_12.YCTTATCTBN	homer_59.NYTTCCWGGAAR	0.290662	0.201227	0.261595	0.217996	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_12.YCTTATCTBN	homer_60.ASWTCCTGBT	0.321439	0.214293	0.257151	0.257151	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_12.YCTTATCTBN	homer_61.DGGGYGKGGC	0.156441	0.127997	0.140797	0.140797	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_12.YCTTATCTBN	homer_62.TWGTCTGV	0.496038	0.396830	0.396830	0.496038	10	8	8	10	0.800000	0.800000	1.000000	D	2	33
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_12.YCTTATCTBN	homer_63.CTGGCAGSCTGCCA	0.274217	0.137109	0.219374	0.156695	10	14	8	16	0.500000	0.800000	0.571429	D	2	45
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_12.YCTTATCTBN	homer_64.VGGGRATTYCCC	0.206331	0.117903	0.165065	0.137554	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_12.YCTTATCTBN	homer_65.CARRGKBCAAAGTYCA	0.349353	0.218346	0.349353	0.218346	10	16	10	16	0.625000	1.000000	0.625000	R	-5	49
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_12.YCTTATCTBN	homer_66.CCATTGTTNY	0.459856	0.376246	0.413870	0.413870	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_12.YCTTATCTBN	homer_67.CYAAAAATAG	0.493786	0.329191	0.395029	0.395029	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_12.YCTTATCTBN	homer_68.GGGGGGGG	0.180672	0.114973	0.126470	0.158088	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_12.YCTTATCTBN	homer_69.TTGAMCTTTG	0.433365	0.354571	0.390028	0.390028	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_12.YCTTATCTBN	homer_70.MGGAAGTGAAAC	0.398703	0.276025	0.358833	0.299028	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_12.YCTTATCTBN	homer_71.HACTTCCGGY	0.272469	0.222929	0.245222	0.245222	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_12.YCTTATCTBN	homer_72.NRYTTCCGGY	0.325349	0.266195	0.292814	0.292814	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_12.YCTTATCTBN	homer_73.AWWNTGCTGAGTCAT	0.410972	0.273981	0.410972	0.273981	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_12.YCTTATCTBN	homer_74.AGGCCTAG	0.705566	0.141113	0.211670	0.264587	10	8	3	15	0.200000	0.300000	0.375000	R	-5	33
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_12.YCTTATCTBN	homer_75.VTTACGTAAYNNNNN	0.416792	0.277862	0.416792	0.277862	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_12.YCTTATCTBN	homer_76.TGCTGACTCA	0.358204	0.238803	0.286563	0.286563	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_12.YCTTATCTBN	homer_77.ATTGCGCAAC	0.358433	0.153614	0.215060	0.215060	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_13.NBWGATAAGR	homer_1.ATTTCCTGTN	0.342100	0.279900	0.307890	0.307890	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_13.NBWGATAAGR	homer_2.ACCGGAAGTG	0.257995	0.211087	0.232196	0.232196	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_13.NBWGATAAGR	homer_3.AACCGGAAGT	0.137468	0.137468	0.137468	0.137468	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_13.NBWGATAAGR	homer_4.ACAGGAAGTG	0.231582	0.189476	0.208424	0.208424	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_13.NBWGATAAGR	homer_5.RACCGGAAGT	0.161308	0.131979	0.145177	0.145177	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_13.NBWGATAAGR	homer_6.AGAGGAAGTG	0.317413	0.211609	0.253931	0.253931	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_13.NBWGATAAGR	homer_7.NNAYTTCCTGHN	0.377579	0.314649	0.377579	0.314649	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_13.NBWGATAAGR	homer_8.NRYTTCCGGH	0.366181	0.299603	0.329563	0.329563	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_13.NBWGATAAGR	homer_9.MACAGGAAGT	0.326460	0.175786	0.228522	0.228522	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_13.NBWGATAAGR	homer_10.ACTTCCKGKT	0.167457	0.167457	0.167457	0.167457	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_13.NBWGATAAGR	homer_11.ACVAGGAAGT	0.548278	0.234976	0.328967	0.328967	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_13.NBWGATAAGR	homer_12.YCTTATCTBN	0.989184	0.989184	0.989184	0.989184	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_13.NBWGATAAGR	homer_13.NBWGATAAGR	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_13.NBWGATAAGR	homer_14.TGGCAGTTGG	0.394173	0.262782	0.315338	0.315338	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_13.NBWGATAAGR	homer_15.AVCCGGAAGT	0.144855	0.144855	0.144855	0.144855	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_13.NBWGATAAGR	homer_16.ANCAGGAAGT	0.561202	0.240515	0.336721	0.336721	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_13.NBWGATAAGR	homer_17.SAGATAAGRV	0.980007	0.801824	0.882006	0.882006	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_13.NBWGATAAGR	homer_18.TGCTGAGTCA	0.448669	0.299113	0.358935	0.358935	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_13.NBWGATAAGR	homer_19.GCTATTTTTAGC	0.437119	0.302621	0.393407	0.327839	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_13.NBWGATAAGR	homer_20.GGCVGTTR	0.466260	0.296711	0.326382	0.407977	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_13.NBWGATAAGR	homer_21.CYTGGCABNSTGCCAR	0.288106	0.152527	0.259295	0.162060	10	16	9	17	0.529412	0.900000	0.562500	R	-7	49
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_13.NBWGATAAGR	homer_22.BBCTTATCTS	0.985029	0.805933	0.886526	0.886526	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_13.NBWGATAAGR	homer_23.VACAGGAAAT	0.306254	0.250571	0.275629	0.275629	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_13.NBWGATAAGR	homer_24.RGKGGGCGKGGC	0.720267	0.072027	0.144053	0.120044	10	12	2	20	0.100000	0.200000	0.166667	D	-10	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_13.NBWGATAAGR	homer_25.AGATAASR	0.973273	0.778618	0.778618	0.973273	10	8	8	10	0.800000	0.800000	1.000000	D	2	33
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_13.NBWGATAAGR	homer_26.YGGCCCCGCCCC	0.309216	0.068715	0.123687	0.103072	10	12	4	18	0.222222	0.400000	0.333333	R	-8	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_13.NBWGATAAGR	homer_27.AVCAGGAAGT	0.235678	0.192827	0.212110	0.212110	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_13.NBWGATAAGR	homer_28.RGKGGGCGGAGC	0.339977	0.099993	0.169988	0.141657	10	12	5	17	0.294118	0.500000	0.416667	D	-7	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_13.NBWGATAAGR	homer_29.AWWWTGCTGAGTCAT	0.428575	0.285717	0.428575	0.285717	10	15	10	15	0.666667	1.000000	0.666667	D	-2	47
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_13.NBWGATAAGR	homer_30.CAAAGGTCAG	0.425727	0.348322	0.383154	0.383154	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_13.NBWGATAAGR	homer_31.VTGACTCATC	0.464387	0.250054	0.325071	0.325071	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_13.NBWGATAAGR	homer_32.AAAGRGGAAGTG	0.240886	0.200739	0.240886	0.200739	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_13.NBWGATAAGR	homer_33.GRAASTGAAAST	0.428728	0.296812	0.385855	0.321546	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_13.NBWGATAAGR	homer_34.CCCCTCCCCCAC	0.199865	0.138368	0.179878	0.149899	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_13.NBWGATAAGR	homer_35.GAAAGTGAAAGT	0.393464	0.272398	0.354118	0.295098	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_13.NBWGATAAGR	homer_36.DATGASTCATHN	0.417430	0.238531	0.333944	0.278286	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_13.NBWGATAAGR	homer_37.NDATGASTCAYN	0.408880	0.233645	0.327104	0.272586	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_13.NBWGATAAGR	homer_38.RATGASTCAT	0.457704	0.246456	0.320393	0.320393	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_13.NBWGATAAGR	homer_39.DATGASTCAT	0.435987	0.234762	0.305191	0.305191	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_13.NBWGATAAGR	homer_40.AGTTTCAKTTTC	0.333322	0.230761	0.299990	0.249992	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_13.NBWGATAAGR	homer_41.NNATGASTCATH	0.432191	0.246966	0.345752	0.288127	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_13.NBWGATAAGR	homer_42.SAAACCACAG	0.305825	0.250220	0.275242	0.275242	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_13.NBWGATAAGR	homer_43.GAAASYGAAASY	0.331069	0.229202	0.297963	0.248302	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_13.NBWGATAAGR	homer_44.AVCAGCTG	0.396259	0.252165	0.277381	0.346726	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_13.NBWGATAAGR	homer_45.SGTCACGTGR	0.351173	0.189093	0.245821	0.245821	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_13.NBWGATAAGR	homer_46.NATGASTCABNN	0.407000	0.232571	0.325600	0.271333	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_13.NBWGATAAGR	homer_47.GATGASTCATCN	0.418072	0.238898	0.334458	0.278715	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_13.NBWGATAAGR	homer_48.AGTTTCASTTTC	0.385338	0.266772	0.346804	0.289003	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_13.NBWGATAAGR	homer_49.RCAGGATGTGGT	0.314762	0.262302	0.314762	0.262302	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_13.NBWGATAAGR	homer_50.GGGGGAATCCCC	0.194768	0.162307	0.194768	0.162307	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_13.NBWGATAAGR	homer_51.GCTGTGGTTW	0.315671	0.210448	0.252537	0.252537	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_13.NBWGATAAGR	homer_52.GGATGACTCATC	0.442025	0.252586	0.353620	0.294683	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_13.NBWGATAAGR	homer_53.NWAACCACADNN	0.267339	0.185081	0.240605	0.200504	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_13.NBWGATAAGR	homer_54.ACCATCTGTT	0.431417	0.352978	0.388276	0.388276	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_13.NBWGATAAGR	homer_55.SVYTTCCNGGAARB	0.257867	0.184190	0.257867	0.184190	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_13.NBWGATAAGR	homer_56.SCCTAGCAACAG	0.332204	0.276837	0.332204	0.276837	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_13.NBWGATAAGR	homer_57.AAACCACARM	0.259582	0.173055	0.207666	0.207666	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_13.NBWGATAAGR	homer_58.RTTATGYAAB	0.477058	0.390321	0.429353	0.429353	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_13.NBWGATAAGR	homer_59.NYTTCCWGGAAR	0.281809	0.195099	0.253628	0.211357	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_13.NBWGATAAGR	homer_60.ASWTCCTGBT	0.333625	0.222417	0.266900	0.266900	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_13.NBWGATAAGR	homer_61.DGGGYGKGGC	0.123706	0.101214	0.111335	0.111335	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_13.NBWGATAAGR	homer_62.TWGTCTGV	0.467747	0.374197	0.374197	0.467747	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_13.NBWGATAAGR	homer_63.CTGGCAGSCTGCCA	0.254591	0.127295	0.203673	0.145480	10	14	8	16	0.500000	0.800000	0.571429	R	-6	45
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_13.NBWGATAAGR	homer_64.VGGGRATTYCCC	0.198838	0.113622	0.159071	0.132559	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_13.NBWGATAAGR	homer_65.CARRGKBCAAAGTYCA	0.338672	0.211670	0.338672	0.211670	10	16	10	16	0.625000	1.000000	0.625000	D	-1	49
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_13.NBWGATAAGR	homer_66.CCATTGTTNY	0.458749	0.375340	0.412874	0.412874	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_13.NBWGATAAGR	homer_67.CYAAAAATAG	0.456227	0.304152	0.364982	0.364982	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_13.NBWGATAAGR	homer_68.GGGGGGGG	0.408460	0.116703	0.163384	0.204230	10	8	4	14	0.285714	0.400000	0.500000	D	-4	33
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_13.NBWGATAAGR	homer_69.TTGAMCTTTG	0.418665	0.342544	0.376799	0.376799	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_13.NBWGATAAGR	homer_70.MGGAAGTGAAAC	0.365107	0.252766	0.328596	0.273830	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_13.NBWGATAAGR	homer_71.HACTTCCGGY	0.279632	0.228790	0.251669	0.251669	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_13.NBWGATAAGR	homer_72.NRYTTCCGGY	0.334843	0.273963	0.301359	0.301359	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_13.NBWGATAAGR	homer_73.AWWNTGCTGAGTCAT	0.422791	0.281861	0.422791	0.281861	10	15	10	15	0.666667	1.000000	0.666667	D	-2	47
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_13.NBWGATAAGR	homer_74.AGGCCTAG	0.643608	0.128722	0.193082	0.241353	10	8	3	15	0.200000	0.300000	0.375000	D	7	33
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_13.NBWGATAAGR	homer_75.VTTACGTAAYNNNNN	0.427909	0.285273	0.427909	0.285273	10	15	10	15	0.666667	1.000000	0.666667	R	-1	47
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_13.NBWGATAAGR	homer_76.TGCTGACTCA	0.406729	0.271153	0.325383	0.325383	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_13.NBWGATAAGR	homer_77.ATTGCGCAAC	0.390781	0.167477	0.234468	0.234468	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_14.TGGCAGTTGG	homer_1.ATTTCCTGTN	0.298978	0.244618	0.269080	0.269080	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_14.TGGCAGTTGG	homer_2.ACCGGAAGTG	0.385251	0.256834	0.308201	0.308201	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_14.TGGCAGTTGG	homer_3.AACCGGAAGT	0.546636	0.294342	0.382645	0.382645	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_14.TGGCAGTTGG	homer_4.ACAGGAAGTG	0.454085	0.302724	0.363268	0.363268	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_14.TGGCAGTTGG	homer_5.RACCGGAAGT	0.538786	0.290116	0.377150	0.377150	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_14.TGGCAGTTGG	homer_6.AGAGGAAGTG	0.461210	0.307474	0.368968	0.368968	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_14.TGGCAGTTGG	homer_7.NNAYTTCCTGHN	0.304649	0.210911	0.274184	0.228487	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_14.TGGCAGTTGG	homer_8.NRYTTCCGGH	0.327183	0.218122	0.261747	0.261747	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_14.TGGCAGTTGG	homer_9.MACAGGAAGT	0.419759	0.279840	0.335808	0.335808	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_14.TGGCAGTTGG	homer_10.ACTTCCKGKT	0.544170	0.293014	0.380919	0.380919	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_14.TGGCAGTTGG	homer_11.ACVAGGAAGT	0.586160	0.315624	0.410312	0.410312	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_14.TGGCAGTTGG	homer_12.YCTTATCTBN	0.398925	0.265950	0.319140	0.319140	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_14.TGGCAGTTGG	homer_13.NBWGATAAGR	0.394173	0.262782	0.315338	0.315338	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_14.TGGCAGTTGG	homer_14.TGGCAGTTGG	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_14.TGGCAGTTGG	homer_15.AVCCGGAAGT	0.505483	0.272183	0.353838	0.353838	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_14.TGGCAGTTGG	homer_16.ANCAGGAAGT	0.519783	0.279883	0.363848	0.363848	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_14.TGGCAGTTGG	homer_17.SAGATAAGRV	0.436453	0.235013	0.305517	0.305517	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_14.TGGCAGTTGG	homer_18.TGCTGAGTCA	0.436137	0.186916	0.261682	0.261682	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_14.TGGCAGTTGG	homer_19.GCTATTTTTAGC	0.310326	0.177329	0.248261	0.206884	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_14.TGGCAGTTGG	homer_20.GGCVGTTR	0.968577	0.774862	0.774862	0.968577	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_14.TGGCAGTTGG	homer_21.CYTGGCABNSTGCCAR	0.534515	0.334072	0.534515	0.334072	10	16	10	16	0.625000	1.000000	0.625000	D	-2	49
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_14.TGGCAGTTGG	homer_22.BBCTTATCTS	0.414961	0.223441	0.290473	0.290473	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_14.TGGCAGTTGG	homer_23.VACAGGAAAT	0.339132	0.277471	0.305219	0.305219	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_14.TGGCAGTTGG	homer_24.RGKGGGCGKGGC	0.366445	0.305371	0.366445	0.305371	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_14.TGGCAGTTGG	homer_25.AGATAASR	0.471712	0.235856	0.283027	0.353784	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_14.TGGCAGTTGG	homer_26.YGGCCCCGCCCC	0.590311	0.221367	0.354187	0.295156	10	12	6	16	0.375000	0.600000	0.500000	R	-6	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_14.TGGCAGTTGG	homer_27.AVCAGGAAGT	0.483702	0.260455	0.338591	0.338591	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_14.TGGCAGTTGG	homer_28.RGKGGGCGGAGC	0.242104	0.201753	0.242104	0.201753	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_14.TGGCAGTTGG	homer_29.AWWWTGCTGAGTCAT	0.422464	0.237636	0.380218	0.253478	10	15	9	16	0.562500	0.900000	0.600000	R	-6	47
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_14.TGGCAGTTGG	homer_30.CAAAGGTCAG	0.512954	0.419690	0.461659	0.461659	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_14.TGGCAGTTGG	homer_31.VTGACTCATC	0.406608	0.174260	0.243965	0.243965	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_14.TGGCAGTTGG	homer_32.AAAGRGGAAGTG	0.543514	0.253640	0.380460	0.317050	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_14.TGGCAGTTGG	homer_33.GRAASTGAAAST	0.467684	0.389737	0.467684	0.389737	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_14.TGGCAGTTGG	homer_34.CCCCTCCCCCAC	0.347444	0.289537	0.347444	0.289537	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_14.TGGCAGTTGG	homer_35.GAAAGTGAAAGT	0.446305	0.371921	0.446305	0.371921	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_14.TGGCAGTTGG	homer_36.DATGASTCATHN	0.269324	0.153899	0.215459	0.179549	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_14.TGGCAGTTGG	homer_37.NDATGASTCAYN	0.327320	0.152749	0.229124	0.190937	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_14.TGGCAGTTGG	homer_38.RATGASTCAT	0.303953	0.163667	0.212767	0.212767	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_14.TGGCAGTTGG	homer_39.DATGASTCAT	0.159232	0.159232	0.159232	0.159232	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_14.TGGCAGTTGG	homer_40.AGTTTCAKTTTC	0.448062	0.373385	0.448062	0.373385	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_14.TGGCAGTTGG	homer_41.NNATGASTCATH	0.318676	0.148715	0.223073	0.185894	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_14.TGGCAGTTGG	homer_42.SAAACCACAG	0.422118	0.422118	0.422118	0.422118	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_14.TGGCAGTTGG	homer_43.GAAASYGAAASY	0.473692	0.394743	0.473692	0.394743	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_14.TGGCAGTTGG	homer_44.AVCAGCTG	0.614552	0.491641	0.491641	0.614552	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_14.TGGCAGTTGG	homer_45.SGTCACGTGR	0.417641	0.417641	0.417641	0.417641	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_14.TGGCAGTTGG	homer_46.NATGASTCABNN	0.286558	0.163747	0.229246	0.191039	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_14.TGGCAGTTGG	homer_47.GATGASTCATCN	0.260307	0.148747	0.208246	0.173538	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_14.TGGCAGTTGG	homer_48.AGTTTCASTTTC	0.463517	0.386265	0.463517	0.386265	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_14.TGGCAGTTGG	homer_49.RCAGGATGTGGT	0.404914	0.337429	0.404914	0.337429	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_14.TGGCAGTTGG	homer_50.GGGGGAATCCCC	0.233557	0.161693	0.210201	0.175168	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_14.TGGCAGTTGG	homer_51.GCTGTGGTTW	0.355435	0.290810	0.319891	0.319891	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_14.TGGCAGTTGG	homer_52.GGATGACTCATC	0.261972	0.149699	0.209578	0.174648	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_14.TGGCAGTTGG	homer_53.NWAACCACADNN	0.313213	0.261011	0.313213	0.261011	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_14.TGGCAGTTGG	homer_54.ACCATCTGTT	0.671089	0.549072	0.603980	0.603980	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_14.TGGCAGTTGG	homer_55.SVYTTCCNGGAARB	0.365253	0.182626	0.292202	0.208716	10	14	8	16	0.500000	0.800000	0.571429	R	-6	45
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_14.TGGCAGTTGG	homer_56.SCCTAGCAACAG	0.743244	0.346847	0.520271	0.433559	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_14.TGGCAGTTGG	homer_57.AAACCACARM	0.442245	0.361837	0.398020	0.398020	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_14.TGGCAGTTGG	homer_58.RTTATGYAAB	0.740928	0.246976	0.370464	0.370464	10	10	5	15	0.333333	0.500000	0.500000	R	5	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_14.TGGCAGTTGG	homer_59.NYTTCCWGGAAR	0.357476	0.166822	0.250233	0.208528	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_14.TGGCAGTTGG	homer_60.ASWTCCTGBT	0.340988	0.227325	0.272790	0.272790	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_14.TGGCAGTTGG	homer_61.DGGGYGKGGC	0.316898	0.316898	0.316898	0.316898	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_14.TGGCAGTTGG	homer_62.TWGTCTGV	0.460305	0.292921	0.322213	0.402767	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_14.TGGCAGTTGG	homer_63.CTGGCAGSCTGCCA	0.508284	0.363060	0.508284	0.363060	10	14	10	14	0.714286	1.000000	0.714286	R	0	45
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_14.TGGCAGTTGG	homer_64.VGGGRATTYCCC	0.285477	0.237898	0.285477	0.237898	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_14.TGGCAGTTGG	homer_65.CARRGKBCAAAGTYCA	0.510516	0.319072	0.510516	0.319072	10	16	10	16	0.625000	1.000000	0.625000	R	0	49
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_14.TGGCAGTTGG	homer_66.CCATTGTTNY	0.290082	0.290082	0.290082	0.290082	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_14.TGGCAGTTGG	homer_67.CYAAAAATAG	0.354049	0.190642	0.247834	0.247834	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_14.TGGCAGTTGG	homer_68.GGGGGGGG	0.265693	0.212554	0.212554	0.265693	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_14.TGGCAGTTGG	homer_69.TTGAMCTTTG	0.384527	0.314613	0.346074	0.346074	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_14.TGGCAGTTGG	homer_70.MGGAAGTGAAAC	0.432639	0.360533	0.432639	0.360533	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_14.TGGCAGTTGG	homer_71.HACTTCCGGY	0.350262	0.233508	0.280210	0.280210	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_14.TGGCAGTTGG	homer_72.NRYTTCCGGY	0.302649	0.201766	0.242119	0.242119	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_14.TGGCAGTTGG	homer_73.AWWNTGCTGAGTCAT	0.380941	0.214279	0.342847	0.228565	10	15	9	16	0.562500	0.900000	0.600000	R	-6	47
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_14.TGGCAGTTGG	homer_74.AGGCCTAG	0.481533	0.240767	0.288920	0.361150	10	8	6	12	0.500000	0.600000	0.750000	R	-2	33
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_14.TGGCAGTTGG	homer_75.VTTACGTAAYNNNNN	0.522437	0.348292	0.522437	0.348292	10	15	10	15	0.666667	1.000000	0.666667	R	0	47
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_14.TGGCAGTTGG	homer_76.TGCTGACTCA	0.379232	0.252822	0.303386	0.303386	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_14.TGGCAGTTGG	homer_77.ATTGCGCAAC	0.859854	0.286618	0.429927	0.429927	10	10	5	15	0.333333	0.500000	0.500000	R	5	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_15.AVCCGGAAGT	homer_1.ATTTCCTGTN	0.708928	0.708928	0.708928	0.708928	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_15.AVCCGGAAGT	homer_2.ACCGGAAGTG	0.983734	0.804874	0.885361	0.885361	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_15.AVCCGGAAGT	homer_3.AACCGGAAGT	0.992678	0.992678	0.992678	0.992678	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_15.AVCCGGAAGT	homer_4.ACAGGAAGTG	0.891504	0.729413	0.802354	0.802354	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_15.AVCCGGAAGT	homer_5.RACCGGAAGT	0.978623	0.978623	0.978623	0.978623	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_15.AVCCGGAAGT	homer_6.AGAGGAAGTG	0.761186	0.622789	0.685068	0.685068	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_15.AVCCGGAAGT	homer_7.NNAYTTCCTGHN	0.870518	0.725432	0.870518	0.725432	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_15.AVCCGGAAGT	homer_8.NRYTTCCGGH	0.919202	0.752074	0.827282	0.827282	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_15.AVCCGGAAGT	homer_9.MACAGGAAGT	0.783482	0.783482	0.783482	0.783482	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_15.AVCCGGAAGT	homer_10.ACTTCCKGKT	0.948943	0.948943	0.948943	0.948943	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_15.AVCCGGAAGT	homer_11.ACVAGGAAGT	0.862129	0.862129	0.862129	0.862129	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_15.AVCCGGAAGT	homer_12.YCTTATCTBN	0.171509	0.171509	0.171509	0.171509	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_15.AVCCGGAAGT	homer_13.NBWGATAAGR	0.144855	0.144855	0.144855	0.144855	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_15.AVCCGGAAGT	homer_14.TGGCAGTTGG	0.505483	0.272183	0.353838	0.353838	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_15.AVCCGGAAGT	homer_15.AVCCGGAAGT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_15.AVCCGGAAGT	homer_16.ANCAGGAAGT	0.820306	0.820306	0.820306	0.820306	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_15.AVCCGGAAGT	homer_17.SAGATAAGRV	0.190674	0.156006	0.171607	0.171607	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_15.AVCCGGAAGT	homer_18.TGCTGAGTCA	0.230322	0.188445	0.207290	0.207290	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_15.AVCCGGAAGT	homer_19.GCTATTTTTAGC	0.326189	0.225823	0.293570	0.244641	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_15.AVCCGGAAGT	homer_20.GGCVGTTR	0.543290	0.271645	0.325974	0.407468	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_15.AVCCGGAAGT	homer_21.CYTGGCABNSTGCCAR	0.434521	0.230040	0.391069	0.244418	10	16	9	17	0.529412	0.900000	0.562500	D	1	49
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_15.AVCCGGAAGT	homer_22.BBCTTATCTS	0.186048	0.152221	0.167443	0.167443	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_15.AVCCGGAAGT	homer_23.VACAGGAAAT	0.801340	0.801340	0.801340	0.801340	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_15.AVCCGGAAGT	homer_24.RGKGGGCGKGGC	0.356245	0.246631	0.320621	0.267184	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_15.AVCCGGAAGT	homer_25.AGATAASR	0.543018	0.108604	0.162906	0.203632	10	8	3	15	0.200000	0.300000	0.375000	D	7	33
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_15.AVCCGGAAGT	homer_26.YGGCCCCGCCCC	0.339363	0.282802	0.339363	0.282802	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_15.AVCCGGAAGT	homer_27.AVCAGGAAGT	0.901504	0.901504	0.901504	0.901504	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_15.AVCCGGAAGT	homer_28.RGKGGGCGGAGC	0.397778	0.275385	0.358000	0.298333	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_15.AVCCGGAAGT	homer_29.AWWWTGCTGAGTCAT	0.300433	0.200289	0.300433	0.200289	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_15.AVCCGGAAGT	homer_30.CAAAGGTCAG	0.375154	0.202006	0.262608	0.262608	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_15.AVCCGGAAGT	homer_31.VTGACTCATC	0.183123	0.122082	0.146499	0.146499	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_15.AVCCGGAAGT	homer_32.AAAGRGGAAGTG	0.797213	0.664344	0.797213	0.664344	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_15.AVCCGGAAGT	homer_33.GRAASTGAAAST	0.604021	0.503351	0.604021	0.503351	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_15.AVCCGGAAGT	homer_34.CCCCTCCCCCAC	0.340541	0.283784	0.340541	0.283784	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_15.AVCCGGAAGT	homer_35.GAAAGTGAAAGT	0.561711	0.468092	0.561711	0.468092	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_15.AVCCGGAAGT	homer_36.DATGASTCATHN	0.184295	0.105312	0.147436	0.122864	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_15.AVCCGGAAGT	homer_37.NDATGASTCAYN	0.174405	0.099660	0.139524	0.116270	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_15.AVCCGGAAGT	homer_38.RATGASTCAT	0.243401	0.104315	0.146040	0.146040	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_15.AVCCGGAAGT	homer_39.DATGASTCAT	0.222640	0.095417	0.133584	0.133584	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_15.AVCCGGAAGT	homer_40.AGTTTCAKTTTC	0.549298	0.457748	0.549298	0.457748	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_15.AVCCGGAAGT	homer_41.NNATGASTCATH	0.197974	0.113128	0.158379	0.131983	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_15.AVCCGGAAGT	homer_42.SAAACCACAG	0.424529	0.283020	0.339623	0.339623	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_15.AVCCGGAAGT	homer_43.GAAASYGAAASY	0.620924	0.517437	0.620924	0.517437	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_15.AVCCGGAAGT	homer_44.AVCAGCTG	0.418233	0.334586	0.334586	0.418233	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_15.AVCCGGAAGT	homer_45.SGTCACGTGR	0.161730	0.161730	0.161730	0.161730	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_15.AVCCGGAAGT	homer_46.NATGASTCABNN	0.148488	0.084851	0.118791	0.098992	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_15.AVCCGGAAGT	homer_47.GATGASTCATCN	0.159024	0.110094	0.143122	0.119268	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_15.AVCCGGAAGT	homer_48.AGTTTCASTTTC	0.548791	0.457326	0.548791	0.457326	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_15.AVCCGGAAGT	homer_49.RCAGGATGTGGT	0.742884	0.514305	0.668596	0.557163	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_15.AVCCGGAAGT	homer_50.GGGGGAATCCCC	0.440770	0.305148	0.396693	0.330577	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_15.AVCCGGAAGT	homer_51.GCTGTGGTTW	0.341071	0.279058	0.306964	0.306964	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_15.AVCCGGAAGT	homer_52.GGATGACTCATC	0.296012	0.111005	0.177607	0.148006	10	12	6	16	0.375000	0.600000	0.500000	D	4	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_15.AVCCGGAAGT	homer_53.NWAACCACADNN	0.358514	0.298761	0.358514	0.298761	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_15.AVCCGGAAGT	homer_54.ACCATCTGTT	0.411645	0.336800	0.370480	0.370480	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_15.AVCCGGAAGT	homer_55.SVYTTCCNGGAARB	0.705630	0.504021	0.705630	0.504021	10	14	10	14	0.714286	1.000000	0.714286	D	-4	45
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_15.AVCCGGAAGT	homer_56.SCCTAGCAACAG	0.286718	0.238931	0.286718	0.238931	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_15.AVCCGGAAGT	homer_57.AAACCACARM	0.388809	0.318116	0.349928	0.349928	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_15.AVCCGGAAGT	homer_58.RTTATGYAAB	0.263522	0.215609	0.237170	0.237170	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_15.AVCCGGAAGT	homer_59.NYTTCCWGGAAR	0.663341	0.552784	0.663341	0.552784	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_15.AVCCGGAAGT	homer_60.ASWTCCTGBT	0.810741	0.810741	0.810741	0.810741	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_15.AVCCGGAAGT	homer_61.DGGGYGKGGC	0.411949	0.221818	0.288364	0.288364	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_15.AVCCGGAAGT	homer_62.TWGTCTGV	0.198760	0.159008	0.159008	0.198760	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_15.AVCCGGAAGT	homer_63.CTGGCAGSCTGCCA	0.502815	0.251408	0.402252	0.287323	10	14	8	16	0.500000	0.800000	0.571429	D	2	45
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_15.AVCCGGAAGT	homer_64.VGGGRATTYCCC	0.469758	0.268433	0.375806	0.313172	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_15.AVCCGGAAGT	homer_65.CARRGKBCAAAGTYCA	0.334013	0.208758	0.334013	0.208758	10	16	10	16	0.625000	1.000000	0.625000	D	-3	49
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_15.AVCCGGAAGT	homer_66.CCATTGTTNY	0.199918	0.163569	0.179926	0.179926	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_15.AVCCGGAAGT	homer_67.CYAAAAATAG	0.441675	0.294450	0.353340	0.353340	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_15.AVCCGGAAGT	homer_68.GGGGGGGG	0.491557	0.245778	0.294934	0.368668	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_15.AVCCGGAAGT	homer_69.TTGAMCTTTG	0.490956	0.210410	0.294573	0.294573	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_15.AVCCGGAAGT	homer_70.MGGAAGTGAAAC	0.918826	0.428785	0.643178	0.535982	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_15.AVCCGGAAGT	homer_71.HACTTCCGGY	0.975264	0.797943	0.877738	0.877738	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_15.AVCCGGAAGT	homer_72.NRYTTCCGGY	0.947828	0.775496	0.853045	0.853045	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_15.AVCCGGAAGT	homer_73.AWWNTGCTGAGTCAT	0.312008	0.208005	0.312008	0.208005	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_15.AVCCGGAAGT	homer_74.AGGCCTAG	0.439678	0.169107	0.219839	0.274798	10	8	5	13	0.384615	0.500000	0.625000	R	-3	33
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_15.AVCCGGAAGT	homer_75.VTTACGTAAYNNNNN	0.280354	0.186903	0.280354	0.186903	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_15.AVCCGGAAGT	homer_76.TGCTGACTCA	0.282014	0.230738	0.253812	0.253812	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_15.AVCCGGAAGT	homer_77.ATTGCGCAAC	0.339200	0.277527	0.305280	0.305280	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_16.ANCAGGAAGT	homer_1.ATTTCCTGTN	0.847231	0.847231	0.847231	0.847231	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_16.ANCAGGAAGT	homer_2.ACCGGAAGTG	0.835411	0.683518	0.751870	0.751870	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_16.ANCAGGAAGT	homer_3.AACCGGAAGT	0.817672	0.817672	0.817672	0.817672	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_16.ANCAGGAAGT	homer_4.ACAGGAAGTG	0.955146	0.781483	0.859631	0.859631	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_16.ANCAGGAAGT	homer_5.RACCGGAAGT	0.860152	0.860152	0.860152	0.860152	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_16.ANCAGGAAGT	homer_6.AGAGGAAGTG	0.932544	0.762991	0.839290	0.839290	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_16.ANCAGGAAGT	homer_7.NNAYTTCCTGHN	0.891271	0.742726	0.891271	0.742726	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_16.ANCAGGAAGT	homer_8.NRYTTCCGGH	0.846142	0.692298	0.761527	0.761527	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_16.ANCAGGAAGT	homer_9.MACAGGAAGT	0.884377	0.884377	0.884377	0.884377	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_16.ANCAGGAAGT	homer_10.ACTTCCKGKT	0.948561	0.948561	0.948561	0.948561	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_16.ANCAGGAAGT	homer_11.ACVAGGAAGT	0.969470	0.969470	0.969470	0.969470	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_16.ANCAGGAAGT	homer_12.YCTTATCTBN	0.597317	0.255993	0.358390	0.358390	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_16.ANCAGGAAGT	homer_13.NBWGATAAGR	0.561202	0.240515	0.336721	0.336721	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_16.ANCAGGAAGT	homer_14.TGGCAGTTGG	0.519783	0.279883	0.363848	0.363848	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_16.ANCAGGAAGT	homer_15.AVCCGGAAGT	0.820306	0.820306	0.820306	0.820306	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_16.ANCAGGAAGT	homer_16.ANCAGGAAGT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_16.ANCAGGAAGT	homer_17.SAGATAAGRV	0.570685	0.307292	0.399479	0.399479	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_16.ANCAGGAAGT	homer_18.TGCTGAGTCA	0.383948	0.206741	0.268764	0.268764	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_16.ANCAGGAAGT	homer_19.GCTATTTTTAGC	0.295234	0.204393	0.265711	0.221425	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_16.ANCAGGAAGT	homer_20.GGCVGTTR	0.555880	0.277940	0.333528	0.416910	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_16.ANCAGGAAGT	homer_21.CYTGGCABNSTGCCAR	0.431128	0.228244	0.388015	0.242509	10	16	9	17	0.529412	0.900000	0.562500	D	1	49
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_16.ANCAGGAAGT	homer_22.BBCTTATCTS	0.557173	0.300016	0.390021	0.390021	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_16.ANCAGGAAGT	homer_23.VACAGGAAAT	0.856460	0.856460	0.856460	0.856460	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_16.ANCAGGAAGT	homer_24.RGKGGGCGKGGC	0.388232	0.268776	0.349408	0.291174	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_16.ANCAGGAAGT	homer_25.AGATAASR	0.455430	0.227715	0.273258	0.341573	10	8	6	12	0.500000	0.600000	0.750000	D	-2	33
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_16.ANCAGGAAGT	homer_26.YGGCCCCGCCCC	0.192952	0.160793	0.192952	0.160793	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_16.ANCAGGAAGT	homer_27.AVCAGGAAGT	0.975193	0.975193	0.975193	0.975193	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_16.ANCAGGAAGT	homer_28.RGKGGGCGGAGC	0.258706	0.215588	0.258706	0.215588	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_16.ANCAGGAAGT	homer_29.AWWWTGCTGAGTCAT	0.356357	0.237571	0.356357	0.237571	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_16.ANCAGGAAGT	homer_30.CAAAGGTCAG	0.228459	0.228459	0.228459	0.228459	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_16.ANCAGGAAGT	homer_31.VTGACTCATC	0.285504	0.233594	0.256953	0.256953	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_16.ANCAGGAAGT	homer_32.AAAGRGGAAGTG	0.882626	0.735522	0.882626	0.735522	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_16.ANCAGGAAGT	homer_33.GRAASTGAAAST	0.590462	0.492052	0.590462	0.492052	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_16.ANCAGGAAGT	homer_34.CCCCTCCCCCAC	0.340887	0.284073	0.340887	0.284073	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_16.ANCAGGAAGT	homer_35.GAAAGTGAAAGT	0.591391	0.492825	0.591391	0.492825	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_16.ANCAGGAAGT	homer_36.DATGASTCATHN	0.254968	0.212473	0.254968	0.212473	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_16.ANCAGGAAGT	homer_37.NDATGASTCAYN	0.273312	0.227760	0.273312	0.227760	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_16.ANCAGGAAGT	homer_38.RATGASTCAT	0.273981	0.273981	0.273981	0.273981	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_16.ANCAGGAAGT	homer_39.DATGASTCAT	0.266596	0.266596	0.266596	0.266596	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_16.ANCAGGAAGT	homer_40.AGTTTCAKTTTC	0.558958	0.465798	0.558958	0.465798	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_16.ANCAGGAAGT	homer_41.NNATGASTCATH	0.278719	0.232266	0.278719	0.232266	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_16.ANCAGGAAGT	homer_42.SAAACCACAG	0.232312	0.125091	0.162618	0.162618	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_16.ANCAGGAAGT	homer_43.GAAASYGAAASY	0.576675	0.480563	0.576675	0.480563	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_16.ANCAGGAAGT	homer_44.AVCAGCTG	0.438918	0.279311	0.307242	0.384053	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_16.ANCAGGAAGT	homer_45.SGTCACGTGR	0.286123	0.190749	0.228898	0.228898	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_16.ANCAGGAAGT	homer_46.NATGASTCABNN	0.288086	0.240072	0.288086	0.240072	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_16.ANCAGGAAGT	homer_47.GATGASTCATCN	0.240995	0.200829	0.240995	0.200829	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_16.ANCAGGAAGT	homer_48.AGTTTCASTTTC	0.556198	0.463499	0.556198	0.463499	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_16.ANCAGGAAGT	homer_49.RCAGGATGTGGT	0.899148	0.622487	0.809233	0.674361	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_16.ANCAGGAAGT	homer_50.GGGGGAATCCCC	0.466386	0.322883	0.419747	0.349789	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_16.ANCAGGAAGT	homer_51.GCTGTGGTTW	0.852289	0.150404	0.255687	0.255687	10	10	3	17	0.176471	0.300000	0.300000	R	-7	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_16.ANCAGGAAGT	homer_52.GGATGACTCATC	0.263835	0.219863	0.263835	0.219863	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_16.ANCAGGAAGT	homer_53.NWAACCACADNN	0.220569	0.152702	0.198512	0.165427	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_16.ANCAGGAAGT	homer_54.ACCATCTGTT	0.302807	0.302807	0.302807	0.302807	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_16.ANCAGGAAGT	homer_55.SVYTTCCNGGAARB	0.661892	0.472780	0.661892	0.472780	10	14	10	14	0.714286	1.000000	0.714286	R	-3	45
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_16.ANCAGGAAGT	homer_56.SCCTAGCAACAG	0.346793	0.288994	0.346793	0.288994	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_16.ANCAGGAAGT	homer_57.AAACCACARM	0.248623	0.165749	0.198899	0.198899	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_16.ANCAGGAAGT	homer_58.RTTATGYAAB	0.300278	0.245682	0.270250	0.270250	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_16.ANCAGGAAGT	homer_59.NYTTCCWGGAAR	0.657659	0.548049	0.657659	0.548049	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_16.ANCAGGAAGT	homer_60.ASWTCCTGBT	0.839469	0.839469	0.839469	0.839469	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_16.ANCAGGAAGT	homer_61.DGGGYGKGGC	0.468543	0.252292	0.327980	0.327980	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_16.ANCAGGAAGT	homer_62.TWGTCTGV	0.324146	0.259317	0.259317	0.324146	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_16.ANCAGGAAGT	homer_63.CTGGCAGSCTGCCA	0.480325	0.240162	0.384260	0.274471	10	14	8	16	0.500000	0.800000	0.571429	D	2	45
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_16.ANCAGGAAGT	homer_64.VGGGRATTYCCC	0.540109	0.308634	0.432087	0.360073	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_16.ANCAGGAAGT	homer_65.CARRGKBCAAAGTYCA	0.330599	0.206624	0.330599	0.206624	10	16	10	16	0.625000	1.000000	0.625000	D	-3	49
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_16.ANCAGGAAGT	homer_66.CCATTGTTNY	0.282535	0.282535	0.282535	0.282535	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_16.ANCAGGAAGT	homer_67.CYAAAAATAG	0.374297	0.249531	0.299437	0.299437	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_16.ANCAGGAAGT	homer_68.GGGGGGGG	0.454850	0.227425	0.272910	0.341138	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_16.ANCAGGAAGT	homer_69.TTGAMCTTTG	0.216788	0.216788	0.216788	0.216788	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_16.ANCAGGAAGT	homer_70.MGGAAGTGAAAC	0.915821	0.427383	0.641075	0.534229	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_16.ANCAGGAAGT	homer_71.HACTTCCGGY	0.820137	0.671022	0.738124	0.738124	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_16.ANCAGGAAGT	homer_72.NRYTTCCGGY	0.774628	0.633786	0.697165	0.697165	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_16.ANCAGGAAGT	homer_73.AWWNTGCTGAGTCAT	0.362215	0.241477	0.362215	0.241477	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_16.ANCAGGAAGT	homer_74.AGGCCTAG	0.348550	0.278840	0.278840	0.348550	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_16.ANCAGGAAGT	homer_75.VTTACGTAAYNNNNN	0.236481	0.157654	0.236481	0.157654	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_16.ANCAGGAAGT	homer_76.TGCTGACTCA	0.321020	0.262653	0.288918	0.288918	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_16.ANCAGGAAGT	homer_77.ATTGCGCAAC	0.281020	0.229925	0.252918	0.252918	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_17.SAGATAAGRV	homer_1.ATTTCCTGTN	0.403115	0.268744	0.322492	0.322492	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_17.SAGATAAGRV	homer_2.ACCGGAAGTG	0.275402	0.183601	0.220321	0.220321	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_17.SAGATAAGRV	homer_3.AACCGGAAGT	0.180480	0.147665	0.162432	0.162432	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_17.SAGATAAGRV	homer_4.ACAGGAAGTG	0.219731	0.179780	0.197758	0.197758	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_17.SAGATAAGRV	homer_5.RACCGGAAGT	0.154179	0.126146	0.138761	0.138761	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_17.SAGATAAGRV	homer_6.AGAGGAAGTG	0.271495	0.222132	0.244346	0.244346	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_17.SAGATAAGRV	homer_7.NNAYTTCCTGHN	0.361428	0.250219	0.325285	0.271071	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_17.SAGATAAGRV	homer_8.NRYTTCCGGH	0.365210	0.243473	0.292168	0.292168	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_17.SAGATAAGRV	homer_9.MACAGGAAGT	0.343134	0.228756	0.274507	0.274507	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_17.SAGATAAGRV	homer_10.ACTTCCKGKT	0.386150	0.207927	0.270305	0.270305	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_17.SAGATAAGRV	homer_11.ACVAGGAAGT	0.553675	0.298133	0.387573	0.387573	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_17.SAGATAAGRV	homer_12.YCTTATCTBN	0.992454	0.812008	0.893209	0.893209	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_17.SAGATAAGRV	homer_13.NBWGATAAGR	0.980007	0.801824	0.882006	0.882006	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_17.SAGATAAGRV	homer_14.TGGCAGTTGG	0.436453	0.235013	0.305517	0.305517	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_17.SAGATAAGRV	homer_15.AVCCGGAAGT	0.190674	0.156006	0.171607	0.171607	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_17.SAGATAAGRV	homer_16.ANCAGGAAGT	0.570685	0.307292	0.399479	0.399479	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_17.SAGATAAGRV	homer_17.SAGATAAGRV	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_17.SAGATAAGRV	homer_18.TGCTGAGTCA	0.396438	0.324358	0.356794	0.356794	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_17.SAGATAAGRV	homer_19.GCTATTTTTAGC	0.449066	0.256609	0.359253	0.299377	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_17.SAGATAAGRV	homer_20.GGCVGTTR	0.550082	0.275041	0.330049	0.412562	10	8	6	12	0.500000	0.600000	0.750000	R	4	33
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_17.SAGATAAGRV	homer_21.CYTGGCABNSTGCCAR	0.314633	0.139837	0.251707	0.157317	10	16	8	18	0.444444	0.800000	0.500000	R	-8	49
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_17.SAGATAAGRV	homer_22.BBCTTATCTS	0.997290	0.997290	0.997290	0.997290	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_17.SAGATAAGRV	homer_23.VACAGGAAAT	0.364839	0.243226	0.291871	0.291871	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_17.SAGATAAGRV	homer_24.RGKGGGCGKGGC	0.372396	0.082755	0.148958	0.124132	10	12	4	18	0.222222	0.400000	0.333333	D	6	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_17.SAGATAAGRV	homer_25.AGATAASR	0.951306	0.761045	0.761045	0.951306	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_17.SAGATAAGRV	homer_26.YGGCCCCGCCCC	0.499943	0.078938	0.149983	0.124986	10	12	3	19	0.157895	0.300000	0.250000	R	7	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_17.SAGATAAGRV	homer_27.AVCAGGAAGT	0.468505	0.252272	0.327954	0.327954	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_17.SAGATAAGRV	homer_28.RGKGGGCGGAGC	0.157590	0.109101	0.141831	0.118193	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_17.SAGATAAGRV	homer_29.AWWWTGCTGAGTCAT	0.389129	0.259419	0.389129	0.259419	10	15	10	15	0.666667	1.000000	0.666667	D	-3	47
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_17.SAGATAAGRV	homer_30.CAAAGGTCAG	0.454862	0.303241	0.363889	0.363889	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_17.SAGATAAGRV	homer_31.VTGACTCATC	0.421042	0.280695	0.336834	0.336834	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_17.SAGATAAGRV	homer_32.AAAGRGGAAGTG	0.274516	0.228763	0.274516	0.228763	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_17.SAGATAAGRV	homer_33.GRAASTGAAAST	0.455412	0.260235	0.364329	0.303608	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_17.SAGATAAGRV	homer_34.CCCCTCCCCCAC	0.224475	0.187063	0.224475	0.187063	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_17.SAGATAAGRV	homer_35.GAAAGTGAAAGT	0.303553	0.252961	0.303553	0.252961	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_17.SAGATAAGRV	homer_36.DATGASTCATHN	0.367875	0.254682	0.331087	0.275906	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_17.SAGATAAGRV	homer_37.NDATGASTCAYN	0.357286	0.247352	0.321557	0.267964	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_17.SAGATAAGRV	homer_38.RATGASTCAT	0.406982	0.271321	0.325586	0.325586	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_17.SAGATAAGRV	homer_39.DATGASTCAT	0.393174	0.262116	0.314539	0.314539	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_17.SAGATAAGRV	homer_40.AGTTTCAKTTTC	0.387924	0.221671	0.310339	0.258616	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_17.SAGATAAGRV	homer_41.NNATGASTCATH	0.381444	0.264077	0.343300	0.286083	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_17.SAGATAAGRV	homer_42.SAAACCACAG	0.224217	0.224217	0.224217	0.224217	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_17.SAGATAAGRV	homer_43.GAAASYGAAASY	0.390592	0.223196	0.312474	0.260395	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_17.SAGATAAGRV	homer_44.AVCAGCTG	0.440469	0.220235	0.264282	0.330352	10	8	6	12	0.500000	0.600000	0.750000	D	-2	33
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_17.SAGATAAGRV	homer_45.SGTCACGTGR	0.205012	0.167737	0.184511	0.184511	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_17.SAGATAAGRV	homer_46.NATGASTCABNN	0.349992	0.242302	0.314993	0.262494	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_17.SAGATAAGRV	homer_47.GATGASTCATCN	0.365817	0.253258	0.329236	0.274363	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_17.SAGATAAGRV	homer_48.AGTTTCASTTTC	0.405717	0.231838	0.324574	0.270478	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_17.SAGATAAGRV	homer_49.RCAGGATGTGGT	0.308528	0.257107	0.308528	0.257107	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_17.SAGATAAGRV	homer_50.GGGGGAATCCCC	0.198300	0.165250	0.198300	0.165250	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_17.SAGATAAGRV	homer_51.GCTGTGGTTW	0.413605	0.177259	0.248163	0.248163	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_17.SAGATAAGRV	homer_52.GGATGACTCATC	0.379113	0.262463	0.341202	0.284335	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_17.SAGATAAGRV	homer_53.NWAACCACADNN	0.192407	0.160339	0.192407	0.160339	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_17.SAGATAAGRV	homer_54.ACCATCTGTT	0.462884	0.308589	0.370307	0.370307	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_17.SAGATAAGRV	homer_55.SVYTTCCNGGAARB	0.321406	0.229575	0.321406	0.229575	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_17.SAGATAAGRV	homer_56.SCCTAGCAACAG	0.331921	0.229792	0.298729	0.248941	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_17.SAGATAAGRV	homer_57.AAACCACARM	0.390473	0.167346	0.234284	0.234284	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_17.SAGATAAGRV	homer_58.RTTATGYAAB	0.525939	0.350626	0.420751	0.420751	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_17.SAGATAAGRV	homer_59.NYTTCCWGGAAR	0.288472	0.199712	0.259625	0.216354	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_17.SAGATAAGRV	homer_60.ASWTCCTGBT	0.241025	0.197202	0.216922	0.216922	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_17.SAGATAAGRV	homer_61.DGGGYGKGGC	0.148759	0.148759	0.148759	0.148759	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_17.SAGATAAGRV	homer_62.TWGTCTGV	0.510900	0.325118	0.357630	0.447037	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_17.SAGATAAGRV	homer_63.CTGGCAGSCTGCCA	0.174900	0.124929	0.174900	0.124929	10	14	10	14	0.714286	1.000000	0.714286	D	0	45
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_17.SAGATAAGRV	homer_64.VGGGRATTYCCC	0.195989	0.135685	0.176390	0.146992	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_17.SAGATAAGRV	homer_65.CARRGKBCAAAGTYCA	0.299197	0.186998	0.299197	0.186998	10	16	10	16	0.625000	1.000000	0.625000	D	-2	49
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_17.SAGATAAGRV	homer_66.CCATTGTTNY	0.456349	0.456349	0.456349	0.456349	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_17.SAGATAAGRV	homer_67.CYAAAAATAG	0.284596	0.284596	0.284596	0.284596	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_17.SAGATAAGRV	homer_68.GGGGGGGG	0.776574	0.155315	0.232972	0.291215	10	8	3	15	0.200000	0.300000	0.375000	D	7	33
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_17.SAGATAAGRV	homer_69.TTGAMCTTTG	0.429018	0.286012	0.343214	0.343214	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_17.SAGATAAGRV	homer_70.MGGAAGTGAAAC	0.377669	0.314724	0.377669	0.314724	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_17.SAGATAAGRV	homer_71.HACTTCCGGY	0.292124	0.194749	0.233699	0.233699	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_17.SAGATAAGRV	homer_72.NRYTTCCGGY	0.350468	0.233645	0.280374	0.280374	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_17.SAGATAAGRV	homer_73.AWWNTGCTGAGTCAT	0.387453	0.258302	0.387453	0.258302	10	15	10	15	0.666667	1.000000	0.666667	D	-3	47
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_17.SAGATAAGRV	homer_74.AGGCCTAG	0.645223	0.184349	0.258089	0.322611	10	8	4	14	0.285714	0.400000	0.500000	D	6	33
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_17.SAGATAAGRV	homer_75.VTTACGTAAYNNNNN	0.476080	0.317387	0.476080	0.317387	10	15	10	15	0.666667	1.000000	0.666667	D	-2	47
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_17.SAGATAAGRV	homer_76.TGCTGACTCA	0.348844	0.285418	0.313960	0.313960	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_17.SAGATAAGRV	homer_77.ATTGCGCAAC	0.239033	0.159355	0.191226	0.191226	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_18.TGCTGAGTCA	homer_1.ATTTCCTGTN	0.567063	0.305342	0.396944	0.396944	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_18.TGCTGAGTCA	homer_2.ACCGGAAGTG	0.225933	0.225933	0.225933	0.225933	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_18.TGCTGAGTCA	homer_3.AACCGGAAGT	0.198810	0.162663	0.178929	0.178929	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_18.TGCTGAGTCA	homer_4.ACAGGAAGTG	0.465250	0.199393	0.279150	0.279150	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_18.TGCTGAGTCA	homer_5.RACCGGAAGT	0.346316	0.186478	0.242421	0.242421	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_18.TGCTGAGTCA	homer_6.AGAGGAAGTG	0.263903	0.263903	0.263903	0.263903	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_18.TGCTGAGTCA	homer_7.NNAYTTCCTGHN	0.428557	0.199993	0.299990	0.249991	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_18.TGCTGAGTCA	homer_8.NRYTTCCGGH	0.252681	0.252681	0.252681	0.252681	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_18.TGCTGAGTCA	homer_9.MACAGGAAGT	0.509748	0.274480	0.356824	0.356824	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_18.TGCTGAGTCA	homer_10.ACTTCCKGKT	0.345665	0.186127	0.241966	0.241966	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_18.TGCTGAGTCA	homer_11.ACVAGGAAGT	0.238924	0.195483	0.215031	0.215031	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_18.TGCTGAGTCA	homer_12.YCTTATCTBN	0.423076	0.282051	0.338461	0.338461	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_18.TGCTGAGTCA	homer_13.NBWGATAAGR	0.448669	0.299113	0.358935	0.358935	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_18.TGCTGAGTCA	homer_14.TGGCAGTTGG	0.436137	0.186916	0.261682	0.261682	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_18.TGCTGAGTCA	homer_15.AVCCGGAAGT	0.230322	0.188445	0.207290	0.207290	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_18.TGCTGAGTCA	homer_16.ANCAGGAAGT	0.383948	0.206741	0.268764	0.268764	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_18.TGCTGAGTCA	homer_17.SAGATAAGRV	0.396438	0.324358	0.356794	0.356794	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_18.TGCTGAGTCA	homer_18.TGCTGAGTCA	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_18.TGCTGAGTCA	homer_19.GCTATTTTTAGC	0.195664	0.135460	0.176097	0.146748	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_18.TGCTGAGTCA	homer_20.GGCVGTTR	0.475024	0.182702	0.237512	0.296890	10	8	5	13	0.384615	0.500000	0.625000	D	-3	33
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_18.TGCTGAGTCA	homer_21.CYTGGCABNSTGCCAR	0.297242	0.185776	0.297242	0.185776	10	16	10	16	0.625000	1.000000	0.625000	D	-5	49
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_18.TGCTGAGTCA	homer_22.BBCTTATCTS	0.384049	0.314222	0.345644	0.345644	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_18.TGCTGAGTCA	homer_23.VACAGGAAAT	0.537209	0.289266	0.376046	0.376046	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_18.TGCTGAGTCA	homer_24.RGKGGGCGKGGC	0.240411	0.166438	0.216370	0.180308	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_18.TGCTGAGTCA	homer_25.AGATAASR	0.385058	0.308047	0.308047	0.385058	10	8	8	10	0.800000	0.800000	1.000000	D	0	33
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_18.TGCTGAGTCA	homer_26.YGGCCCCGCCCC	0.280181	0.233484	0.280181	0.233484	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_18.TGCTGAGTCA	homer_27.AVCAGGAAGT	0.326388	0.175747	0.228472	0.228472	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_18.TGCTGAGTCA	homer_28.RGKGGGCGGAGC	0.430356	0.245918	0.344285	0.286904	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_18.TGCTGAGTCA	homer_29.AWWWTGCTGAGTCAT	0.968722	0.645815	0.968722	0.645815	10	15	10	15	0.666667	1.000000	0.666667	D	-4	47
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_18.TGCTGAGTCA	homer_30.CAAAGGTCAG	0.314491	0.257311	0.283042	0.283042	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_18.TGCTGAGTCA	homer_31.VTGACTCATC	0.953740	0.780333	0.858366	0.858366	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_18.TGCTGAGTCA	homer_32.AAAGRGGAAGTG	0.166522	0.138768	0.166522	0.138768	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_18.TGCTGAGTCA	homer_33.GRAASTGAAAST	0.354893	0.165617	0.248425	0.207021	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_18.TGCTGAGTCA	homer_34.CCCCTCCCCCAC	0.245863	0.204885	0.245863	0.204885	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_18.TGCTGAGTCA	homer_35.GAAAGTGAAAGT	0.270231	0.187083	0.243208	0.202673	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_18.TGCTGAGTCA	homer_36.DATGASTCATHN	0.908881	0.757401	0.908881	0.757401	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_18.TGCTGAGTCA	homer_37.NDATGASTCAYN	0.897800	0.748166	0.897800	0.748166	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_18.TGCTGAGTCA	homer_38.RATGASTCAT	0.929327	0.760358	0.836394	0.836394	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_18.TGCTGAGTCA	homer_39.DATGASTCAT	0.918141	0.751206	0.826327	0.826327	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_18.TGCTGAGTCA	homer_40.AGTTTCAKTTTC	0.201314	0.167762	0.201314	0.167762	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_18.TGCTGAGTCA	homer_41.NNATGASTCATH	0.894236	0.745197	0.894236	0.745197	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_18.TGCTGAGTCA	homer_42.SAAACCACAG	0.408093	0.219742	0.285665	0.285665	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_18.TGCTGAGTCA	homer_43.GAAASYGAAASY	0.214336	0.148386	0.192902	0.160752	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_18.TGCTGAGTCA	homer_44.AVCAGCTG	0.616910	0.392579	0.431837	0.539797	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_18.TGCTGAGTCA	homer_45.SGTCACGTGR	0.750978	0.250326	0.375489	0.375489	10	10	5	15	0.333333	0.500000	0.500000	D	5	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_18.TGCTGAGTCA	homer_46.NATGASTCABNN	0.910975	0.759146	0.910975	0.759146	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_18.TGCTGAGTCA	homer_47.GATGASTCATCN	0.921497	0.767914	0.921497	0.767914	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_18.TGCTGAGTCA	homer_48.AGTTTCASTTTC	0.322352	0.223167	0.290117	0.241764	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_18.TGCTGAGTCA	homer_49.RCAGGATGTGGT	0.481549	0.180581	0.288929	0.240774	10	12	6	16	0.375000	0.600000	0.500000	R	-6	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_18.TGCTGAGTCA	homer_50.GGGGGAATCCCC	0.345093	0.287577	0.345093	0.287577	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_18.TGCTGAGTCA	homer_51.GCTGTGGTTW	0.248150	0.203032	0.223335	0.223335	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_18.TGCTGAGTCA	homer_52.GGATGACTCATC	0.901972	0.751644	0.901972	0.751644	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_18.TGCTGAGTCA	homer_53.NWAACCACADNN	0.401424	0.187331	0.280997	0.234164	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_18.TGCTGAGTCA	homer_54.ACCATCTGTT	0.466140	0.250998	0.326298	0.326298	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_18.TGCTGAGTCA	homer_55.SVYTTCCNGGAARB	0.766234	0.069658	0.153247	0.109462	10	14	2	22	0.090909	0.200000	0.142857	R	-12	45
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_18.TGCTGAGTCA	homer_56.SCCTAGCAACAG	0.428517	0.244867	0.342813	0.285678	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_18.TGCTGAGTCA	homer_57.AAACCACARM	0.214002	0.175092	0.192602	0.192602	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_18.TGCTGAGTCA	homer_58.RTTATGYAAB	0.336153	0.275034	0.302537	0.302537	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_18.TGCTGAGTCA	homer_59.NYTTCCWGGAAR	0.243170	0.091189	0.145902	0.121585	10	12	6	16	0.375000	0.600000	0.500000	D	4	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_18.TGCTGAGTCA	homer_60.ASWTCCTGBT	0.395474	0.212947	0.276831	0.276831	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_18.TGCTGAGTCA	homer_61.DGGGYGKGGC	0.376527	0.308068	0.338875	0.338875	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_18.TGCTGAGTCA	homer_62.TWGTCTGV	0.348895	0.279116	0.279116	0.348895	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_18.TGCTGAGTCA	homer_63.CTGGCAGSCTGCCA	0.245418	0.175299	0.245418	0.175299	10	14	10	14	0.714286	1.000000	0.714286	D	-2	45
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_18.TGCTGAGTCA	homer_64.VGGGRATTYCCC	0.183024	0.152520	0.183024	0.152520	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_18.TGCTGAGTCA	homer_65.CARRGKBCAAAGTYCA	0.315217	0.197011	0.315217	0.197011	10	16	10	16	0.625000	1.000000	0.625000	D	-5	49
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_18.TGCTGAGTCA	homer_66.CCATTGTTNY	0.401628	0.172126	0.240977	0.240977	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_18.TGCTGAGTCA	homer_67.CYAAAAATAG	0.202330	0.134887	0.161864	0.161864	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_18.TGCTGAGTCA	homer_68.GGGGGGGG	0.187984	0.119626	0.131589	0.164486	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_18.TGCTGAGTCA	homer_69.TTGAMCTTTG	0.390608	0.319589	0.351547	0.351547	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_18.TGCTGAGTCA	homer_70.MGGAAGTGAAAC	0.583961	0.218985	0.350377	0.291980	10	12	6	16	0.375000	0.600000	0.500000	R	4	41
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_18.TGCTGAGTCA	homer_71.HACTTCCGGY	0.238059	0.238059	0.238059	0.238059	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_18.TGCTGAGTCA	homer_72.NRYTTCCGGY	0.264837	0.264837	0.264837	0.264837	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_18.TGCTGAGTCA	homer_73.AWWNTGCTGAGTCAT	0.978449	0.652299	0.978449	0.652299	10	15	10	15	0.666667	1.000000	0.666667	D	-4	47
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_18.TGCTGAGTCA	homer_74.AGGCCTAG	0.250310	0.159288	0.175217	0.219021	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_18.TGCTGAGTCA	homer_75.VTTACGTAAYNNNNN	0.417803	0.278535	0.417803	0.278535	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_18.TGCTGAGTCA	homer_76.TGCTGACTCA	0.888266	0.888266	0.888266	0.888266	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_18.TGCTGAGTCA	homer_77.ATTGCGCAAC	0.347292	0.284148	0.312563	0.312563	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_19.GCTATTTTTAGC	homer_1.ATTTCCTGTN	0.475876	0.329452	0.356907	0.428288	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_19.GCTATTTTTAGC	homer_2.ACCGGAAGTG	0.289496	0.241247	0.241247	0.289496	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_19.GCTATTTTTAGC	homer_3.AACCGGAAGT	0.354749	0.245595	0.266061	0.319274	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_19.GCTATTTTTAGC	homer_4.ACAGGAAGTG	0.263510	0.219591	0.219591	0.263510	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_19.GCTATTTTTAGC	homer_5.RACCGGAAGT	0.339728	0.235197	0.254796	0.305755	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_19.GCTATTTTTAGC	homer_6.AGAGGAAGTG	0.169285	0.141071	0.141071	0.169285	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_19.GCTATTTTTAGC	homer_7.NNAYTTCCTGHN	0.284258	0.240526	0.260569	0.260569	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_19.GCTATTTTTAGC	homer_8.NRYTTCCGGH	0.279349	0.232790	0.232790	0.279349	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_19.GCTATTTTTAGC	homer_9.MACAGGAAGT	0.265187	0.183591	0.198890	0.238668	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_19.GCTATTTTTAGC	homer_10.ACTTCCKGKT	0.290793	0.201318	0.218095	0.261714	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_19.GCTATTTTTAGC	homer_11.ACVAGGAAGT	0.287667	0.199154	0.215750	0.258900	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_19.GCTATTTTTAGC	homer_12.YCTTATCTBN	0.450300	0.311746	0.337725	0.405270	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_19.GCTATTTTTAGC	homer_13.NBWGATAAGR	0.437119	0.302621	0.327839	0.393407	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_19.GCTATTTTTAGC	homer_14.TGGCAGTTGG	0.310326	0.177329	0.206884	0.248261	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_19.GCTATTTTTAGC	homer_15.AVCCGGAAGT	0.326189	0.225823	0.244641	0.293570	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_19.GCTATTTTTAGC	homer_16.ANCAGGAAGT	0.295234	0.204393	0.221425	0.265711	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_19.GCTATTTTTAGC	homer_17.SAGATAAGRV	0.449066	0.256609	0.299377	0.359253	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_19.GCTATTTTTAGC	homer_18.TGCTGAGTCA	0.195664	0.135460	0.146748	0.176097	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_19.GCTATTTTTAGC	homer_19.GCTATTTTTAGC	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_19.GCTATTTTTAGC	homer_20.GGCVGTTR	0.361277	0.194534	0.210745	0.316117	12	8	7	13	0.538462	0.583333	0.875000	D	-1	37
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_19.GCTATTTTTAGC	homer_21.CYTGGCABNSTGCCAR	0.580330	0.158272	0.290165	0.217624	12	16	6	22	0.272727	0.500000	0.375000	D	6	53
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_19.GCTATTTTTAGC	homer_22.BBCTTATCTS	0.472578	0.270045	0.315052	0.378063	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_19.GCTATTTTTAGC	homer_23.VACAGGAAAT	0.431388	0.298653	0.323541	0.388249	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_19.GCTATTTTTAGC	homer_24.RGKGGGCGKGGC	0.899607	0.081782	0.149934	0.149934	12	12	2	22	0.090909	0.166667	0.166667	R	10	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_19.GCTATTTTTAGC	homer_25.AGATAASR	0.591539	0.318521	0.345064	0.517597	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_19.GCTATTTTTAGC	homer_26.YGGCCCCGCCCC	0.634994	0.126999	0.211665	0.211665	12	12	4	20	0.200000	0.333333	0.333333	D	8	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_19.GCTATTTTTAGC	homer_27.AVCAGGAAGT	0.325474	0.225328	0.244106	0.292927	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_19.GCTATTTTTAGC	homer_28.RGKGGGCGGAGC	0.944280	0.085844	0.157380	0.157380	12	12	2	22	0.090909	0.166667	0.166667	R	10	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_19.GCTATTTTTAGC	homer_29.AWWWTGCTGAGTCAT	0.480922	0.168323	0.280538	0.224430	12	15	7	20	0.350000	0.583333	0.466667	R	-8	51
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_19.GCTATTTTTAGC	homer_30.CAAAGGTCAG	0.190781	0.158984	0.158984	0.190781	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_19.GCTATTTTTAGC	homer_31.VTGACTCATC	0.143428	0.119523	0.119523	0.143428	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_19.GCTATTTTTAGC	homer_32.AAAGRGGAAGTG	0.482603	0.198719	0.281519	0.281519	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_19.GCTATTTTTAGC	homer_33.GRAASTGAAAST	0.386516	0.231910	0.289887	0.289887	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_19.GCTATTTTTAGC	homer_34.CCCCTCCCCCAC	0.321792	0.084682	0.134080	0.134080	12	12	5	19	0.263158	0.416667	0.416667	R	7	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_19.GCTATTTTTAGC	homer_35.GAAAGTGAAAGT	0.250264	0.250264	0.250264	0.250264	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_19.GCTATTTTTAGC	homer_36.DATGASTCATHN	0.154253	0.130522	0.141399	0.141399	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_19.GCTATTTTTAGC	homer_37.NDATGASTCAYN	0.215934	0.182713	0.197939	0.197939	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_19.GCTATTTTTAGC	homer_38.RATGASTCAT	0.156391	0.130326	0.130326	0.156391	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_19.GCTATTTTTAGC	homer_39.DATGASTCAT	0.178781	0.148985	0.148985	0.178781	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_19.GCTATTTTTAGC	homer_40.AGTTTCAKTTTC	0.438258	0.262955	0.328693	0.328693	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_19.GCTATTTTTAGC	homer_41.NNATGASTCATH	0.199635	0.168922	0.182999	0.182999	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_19.GCTATTTTTAGC	homer_42.SAAACCACAG	0.330630	0.275525	0.275525	0.330630	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_19.GCTATTTTTAGC	homer_43.GAAASYGAAASY	0.267133	0.267133	0.267133	0.267133	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_19.GCTATTTTTAGC	homer_44.AVCAGCTG	0.354642	0.151989	0.177321	0.265981	12	8	6	14	0.428571	0.500000	0.750000	R	-2	37
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_19.GCTATTTTTAGC	homer_45.SGTCACGTGR	0.104753	0.072521	0.078565	0.094278	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_19.GCTATTTTTAGC	homer_46.NATGASTCABNN	0.142043	0.101459	0.118369	0.118369	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_19.GCTATTTTTAGC	homer_47.GATGASTCATCN	0.132284	0.111933	0.121260	0.121260	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_19.GCTATTTTTAGC	homer_48.AGTTTCASTTTC	0.421380	0.252828	0.316035	0.316035	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_19.GCTATTTTTAGC	homer_49.RCAGGATGTGGT	0.187557	0.187557	0.187557	0.187557	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_19.GCTATTTTTAGC	homer_50.GGGGGAATCCCC	0.073642	0.062313	0.067505	0.067505	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_19.GCTATTTTTAGC	homer_51.GCTGTGGTTW	0.366538	0.305448	0.305448	0.366538	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_19.GCTATTTTTAGC	homer_52.GGATGACTCATC	0.128936	0.109100	0.118191	0.118191	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_19.GCTATTTTTAGC	homer_53.NWAACCACADNN	0.269197	0.227782	0.246764	0.246764	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_19.GCTATTTTTAGC	homer_54.ACCATCTGTT	0.316331	0.263609	0.263609	0.316331	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_19.GCTATTTTTAGC	homer_55.SVYTTCCNGGAARB	0.307394	0.225422	0.281778	0.241524	12	14	11	15	0.733333	0.916667	0.785714	D	1	49
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_19.GCTATTTTTAGC	homer_56.SCCTAGCAACAG	0.346478	0.293174	0.317605	0.317605	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_19.GCTATTTTTAGC	homer_57.AAACCACARM	0.298658	0.248881	0.248881	0.298658	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_19.GCTATTTTTAGC	homer_58.RTTATGYAAB	0.301807	0.251506	0.251506	0.301807	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_19.GCTATTTTTAGC	homer_59.NYTTCCWGGAAR	0.389547	0.233728	0.292160	0.292160	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_19.GCTATTTTTAGC	homer_60.ASWTCCTGBT	0.260493	0.180341	0.195370	0.234443	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_19.GCTATTTTTAGC	homer_61.DGGGYGKGGC	0.984809	0.098481	0.164135	0.196962	12	10	2	20	0.100000	0.166667	0.200000	R	10	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_19.GCTATTTTTAGC	homer_62.TWGTCTGV	0.586540	0.195513	0.244391	0.366587	12	8	5	15	0.333333	0.416667	0.625000	D	-3	37
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_19.GCTATTTTTAGC	homer_63.CTGGCAGSCTGCCA	0.652320	0.155314	0.271800	0.232972	12	14	5	21	0.238095	0.416667	0.357143	D	7	49
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_19.GCTATTTTTAGC	homer_64.VGGGRATTYCCC	0.126092	0.090065	0.105076	0.105076	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_19.GCTATTTTTAGC	homer_65.CARRGKBCAAAGTYCA	0.249731	0.187298	0.249731	0.187298	12	16	12	16	0.750000	1.000000	0.750000	R	0	53
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_19.GCTATTTTTAGC	homer_66.CCATTGTTNY	0.498933	0.415777	0.415777	0.498933	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_19.GCTATTTTTAGC	homer_67.CYAAAAATAG	0.963155	0.802629	0.802629	0.963155	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_19.GCTATTTTTAGC	homer_68.GGGGGGGG	0.402869	0.071095	0.100717	0.151076	12	8	3	17	0.176471	0.250000	0.375000	D	9	37
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_19.GCTATTTTTAGC	homer_69.TTGAMCTTTG	0.517390	0.152174	0.215579	0.258695	12	10	5	17	0.294118	0.416667	0.500000	D	7	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_19.GCTATTTTTAGC	homer_70.MGGAAGTGAAAC	0.283175	0.202268	0.235979	0.235979	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_19.GCTATTTTTAGC	homer_71.HACTTCCGGY	0.318605	0.265504	0.265504	0.318605	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_19.GCTATTTTTAGC	homer_72.NRYTTCCGGY	0.333818	0.278182	0.278182	0.333818	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_19.GCTATTTTTAGC	homer_73.AWWNTGCTGAGTCAT	0.430308	0.150608	0.251013	0.200810	12	15	7	20	0.350000	0.583333	0.466667	R	-8	51
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_19.GCTATTTTTAGC	homer_74.AGGCCTAG	0.313871	0.134516	0.156936	0.235403	12	8	6	14	0.428571	0.500000	0.750000	R	6	37
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_19.GCTATTTTTAGC	homer_75.VTTACGTAAYNNNNN	0.292380	0.233904	0.292380	0.233904	12	15	12	15	0.800000	1.000000	0.800000	R	-1	51
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_19.GCTATTTTTAGC	homer_76.TGCTGACTCA	0.228641	0.158290	0.171480	0.205777	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_19.GCTATTTTTAGC	homer_77.ATTGCGCAAC	0.277433	0.192069	0.208074	0.249689	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_20.GGCVGTTR	homer_1.ATTTCCTGTN	0.295222	0.236178	0.295222	0.236178	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_20.GGCVGTTR	homer_2.ACCGGAAGTG	0.417230	0.265510	0.365077	0.292061	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_20.GGCVGTTR	homer_3.AACCGGAAGT	0.582576	0.291288	0.436932	0.349545	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_20.GGCVGTTR	homer_4.ACAGGAAGTG	0.478079	0.304232	0.418319	0.334656	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_20.GGCVGTTR	homer_5.RACCGGAAGT	0.562355	0.281178	0.421767	0.337413	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_20.GGCVGTTR	homer_6.AGAGGAAGTG	0.482063	0.306767	0.421805	0.337444	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_20.GGCVGTTR	homer_7.NNAYTTCCTGHN	0.327214	0.218142	0.327214	0.218142	8	12	8	12	0.666667	1.000000	0.666667	R	-4	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_20.GGCVGTTR	homer_8.NRYTTCCGGH	0.345193	0.276155	0.345193	0.276155	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_20.GGCVGTTR	homer_9.MACAGGAAGT	0.538896	0.269448	0.404172	0.323338	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_20.GGCVGTTR	homer_10.ACTTCCKGKT	0.554618	0.277309	0.415964	0.332771	8	10	6	12	0.500000	0.750000	0.600000	R	-4	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_20.GGCVGTTR	homer_11.ACVAGGAAGT	0.600327	0.300163	0.450245	0.360196	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_20.GGCVGTTR	homer_12.YCTTATCTBN	0.463611	0.295025	0.405659	0.324527	8	10	7	11	0.636364	0.875000	0.700000	R	1	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_20.GGCVGTTR	homer_13.NBWGATAAGR	0.466260	0.296711	0.407977	0.326382	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_20.GGCVGTTR	homer_14.TGGCAGTTGG	0.968577	0.774862	0.968577	0.774862	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_20.GGCVGTTR	homer_15.AVCCGGAAGT	0.543290	0.271645	0.407468	0.325974	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_20.GGCVGTTR	homer_16.ANCAGGAAGT	0.555880	0.277940	0.416910	0.333528	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_20.GGCVGTTR	homer_17.SAGATAAGRV	0.550082	0.275041	0.412562	0.330049	8	10	6	12	0.500000	0.750000	0.600000	R	2	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_20.GGCVGTTR	homer_18.TGCTGAGTCA	0.475024	0.182702	0.296890	0.237512	8	10	5	13	0.384615	0.625000	0.500000	D	3	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_20.GGCVGTTR	homer_19.GCTATTTTTAGC	0.361277	0.194534	0.316117	0.210745	8	12	7	13	0.538462	0.875000	0.583333	D	1	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_20.GGCVGTTR	homer_20.GGCVGTTR	1.000000	1.000000	1.000000	1.000000	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_20.GGCVGTTR	homer_21.CYTGGCABNSTGCCAR	0.512336	0.256168	0.512336	0.256168	8	16	8	16	0.500000	1.000000	0.500000	D	-3	45
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_20.GGCVGTTR	homer_22.BBCTTATCTS	0.563624	0.281812	0.422718	0.338174	8	10	6	12	0.500000	0.750000	0.600000	D	2	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_20.GGCVGTTR	homer_23.VACAGGAAAT	0.320132	0.256106	0.320132	0.256106	8	10	8	10	0.800000	1.000000	0.800000	D	0	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_20.GGCVGTTR	homer_24.RGKGGGCGKGGC	0.410481	0.273654	0.410481	0.273654	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_20.GGCVGTTR	homer_25.AGATAASR	0.703102	0.319592	0.439439	0.439439	8	8	5	11	0.454545	0.625000	0.625000	R	3	29
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_20.GGCVGTTR	homer_26.YGGCCCCGCCCC	0.406945	0.271297	0.406945	0.271297	8	12	8	12	0.666667	1.000000	0.666667	R	-2	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_20.GGCVGTTR	homer_27.AVCAGGAAGT	0.498569	0.249284	0.373927	0.299141	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_20.GGCVGTTR	homer_28.RGKGGGCGGAGC	0.399154	0.266103	0.399154	0.266103	8	12	8	12	0.666667	1.000000	0.666667	D	-4	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_20.GGCVGTTR	homer_29.AWWWTGCTGAGTCAT	0.414273	0.220946	0.414273	0.220946	8	15	8	15	0.533333	1.000000	0.533333	R	-7	43
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_20.GGCVGTTR	homer_30.CAAAGGTCAG	0.496454	0.397163	0.496454	0.397163	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_20.GGCVGTTR	homer_31.VTGACTCATC	0.417905	0.160733	0.261191	0.208953	8	10	5	13	0.384615	0.625000	0.500000	R	-5	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_20.GGCVGTTR	homer_32.AAAGRGGAAGTG	0.555740	0.238174	0.416805	0.277870	8	12	6	14	0.428571	0.750000	0.500000	R	2	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_20.GGCVGTTR	homer_33.GRAASTGAAAST	0.466498	0.310999	0.466498	0.310999	8	12	8	12	0.666667	1.000000	0.666667	R	-3	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_20.GGCVGTTR	homer_34.CCCCTCCCCCAC	0.329962	0.219974	0.329962	0.219974	8	12	8	12	0.666667	1.000000	0.666667	R	-2	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_20.GGCVGTTR	homer_35.GAAAGTGAAAGT	0.415520	0.277013	0.415520	0.277013	8	12	8	12	0.666667	1.000000	0.666667	R	-3	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_20.GGCVGTTR	homer_36.DATGASTCATHN	0.274621	0.147873	0.240293	0.160196	8	12	7	13	0.538462	0.875000	0.583333	D	-5	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_20.GGCVGTTR	homer_37.NDATGASTCAYN	0.392954	0.168409	0.294715	0.196477	8	12	6	14	0.428571	0.750000	0.500000	D	2	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_20.GGCVGTTR	homer_38.RATGASTCAT	0.299177	0.149589	0.224383	0.179506	8	10	6	12	0.500000	0.750000	0.600000	R	-4	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_20.GGCVGTTR	homer_39.DATGASTCAT	0.284557	0.142279	0.213418	0.170734	8	10	6	12	0.500000	0.750000	0.600000	R	-4	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_20.GGCVGTTR	homer_40.AGTTTCAKTTTC	0.453986	0.302657	0.453986	0.302657	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_20.GGCVGTTR	homer_41.NNATGASTCATH	0.387247	0.165963	0.290435	0.193623	8	12	6	14	0.428571	0.750000	0.500000	D	2	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_20.GGCVGTTR	homer_42.SAAACCACAG	0.491334	0.393067	0.491334	0.393067	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_20.GGCVGTTR	homer_43.GAAASYGAAASY	0.461676	0.307784	0.461676	0.307784	8	12	8	12	0.666667	1.000000	0.666667	R	-3	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_20.GGCVGTTR	homer_44.AVCAGCTG	0.511557	0.511557	0.511557	0.511557	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_20.GGCVGTTR	homer_45.SGTCACGTGR	0.345915	0.276732	0.345915	0.276732	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_20.GGCVGTTR	homer_46.NATGASTCABNN	0.355313	0.152277	0.266485	0.177657	8	12	6	14	0.428571	0.750000	0.500000	R	2	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_20.GGCVGTTR	homer_47.GATGASTCATCN	0.449837	0.149946	0.281148	0.187432	8	12	5	15	0.333333	0.625000	0.416667	R	3	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_20.GGCVGTTR	homer_48.AGTTTCASTTTC	0.451955	0.301303	0.451955	0.301303	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_20.GGCVGTTR	homer_49.RCAGGATGTGGT	0.445434	0.296956	0.445434	0.296956	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_20.GGCVGTTR	homer_50.GGGGGAATCCCC	0.332937	0.221958	0.332937	0.221958	8	12	8	12	0.666667	1.000000	0.666667	R	0	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_20.GGCVGTTR	homer_51.GCTGTGGTTW	0.442713	0.354170	0.442713	0.354170	8	10	8	10	0.800000	1.000000	0.800000	D	-2	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_20.GGCVGTTR	homer_52.GGATGACTCATC	0.453528	0.151176	0.283455	0.188970	8	12	5	15	0.333333	0.625000	0.416667	D	3	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_20.GGCVGTTR	homer_53.NWAACCACADNN	0.382583	0.255056	0.382583	0.255056	8	12	8	12	0.666667	1.000000	0.666667	R	-3	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_20.GGCVGTTR	homer_54.ACCATCTGTT	0.539835	0.431868	0.539835	0.431868	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_20.GGCVGTTR	homer_55.SVYTTCCNGGAARB	0.505221	0.189458	0.378915	0.216523	8	14	6	16	0.375000	0.750000	0.428571	D	2	41
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_20.GGCVGTTR	homer_56.SCCTAGCAACAG	0.863765	0.370185	0.647824	0.431883	8	12	6	14	0.428571	0.750000	0.500000	R	2	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_20.GGCVGTTR	homer_57.AAACCACARM	0.499602	0.399681	0.499602	0.399681	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_20.GGCVGTTR	homer_58.RTTATGYAAB	0.894876	0.255679	0.447438	0.357950	8	10	4	14	0.285714	0.500000	0.400000	R	4	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_20.GGCVGTTR	homer_59.NYTTCCWGGAAR	0.465936	0.155312	0.291210	0.194140	8	12	5	15	0.333333	0.625000	0.416667	D	3	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_20.GGCVGTTR	homer_60.ASWTCCTGBT	0.346154	0.220280	0.302885	0.242308	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_20.GGCVGTTR	homer_61.DGGGYGKGGC	0.363429	0.290743	0.363429	0.290743	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_20.GGCVGTTR	homer_62.TWGTCTGV	0.478894	0.287336	0.359170	0.359170	8	8	6	10	0.600000	0.750000	0.750000	D	-2	29
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_20.GGCVGTTR	homer_63.CTGGCAGSCTGCCA	0.473040	0.270309	0.473040	0.270309	8	14	8	14	0.571429	1.000000	0.571429	R	-1	41
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_20.GGCVGTTR	homer_64.VGGGRATTYCCC	0.355783	0.237188	0.355783	0.237188	8	12	8	12	0.666667	1.000000	0.666667	D	-1	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_20.GGCVGTTR	homer_65.CARRGKBCAAAGTYCA	0.499432	0.249716	0.499432	0.249716	8	16	8	16	0.500000	1.000000	0.500000	R	-1	45
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_20.GGCVGTTR	homer_66.CCATTGTTNY	0.650444	0.325222	0.487833	0.390266	8	10	6	12	0.500000	0.750000	0.600000	D	2	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_20.GGCVGTTR	homer_67.CYAAAAATAG	0.372200	0.186100	0.279150	0.223320	8	10	6	12	0.500000	0.750000	0.600000	R	2	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_20.GGCVGTTR	homer_68.GGGGGGGG	0.291010	0.291010	0.291010	0.291010	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_20.GGCVGTTR	homer_69.TTGAMCTTTG	0.369740	0.295792	0.369740	0.295792	8	10	8	10	0.800000	1.000000	0.800000	D	-2	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_20.GGCVGTTR	homer_70.MGGAAGTGAAAC	0.409156	0.272770	0.409156	0.272770	8	12	8	12	0.666667	1.000000	0.666667	R	-2	37
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_20.GGCVGTTR	homer_71.HACTTCCGGY	0.383340	0.243943	0.335422	0.268338	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_20.GGCVGTTR	homer_72.NRYTTCCGGY	0.329046	0.263237	0.329046	0.263237	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_20.GGCVGTTR	homer_73.AWWNTGCTGAGTCAT	0.396547	0.211492	0.396547	0.211492	8	15	8	15	0.533333	1.000000	0.533333	R	-7	43
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_20.GGCVGTTR	homer_74.AGGCCTAG	0.657346	0.298794	0.410841	0.410841	8	8	5	11	0.454545	0.625000	0.625000	R	-3	29
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_20.GGCVGTTR	homer_75.VTTACGTAAYNNNNN	0.637291	0.339889	0.637291	0.339889	8	15	8	15	0.533333	1.000000	0.533333	R	-1	43
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_20.GGCVGTTR	homer_76.TGCTGACTCA	0.350894	0.223296	0.307032	0.245626	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_20.GGCVGTTR	homer_77.ATTGCGCAAC	0.914404	0.261258	0.457202	0.365762	8	10	4	14	0.285714	0.500000	0.400000	R	4	33
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_21.CYTGGCABNSTGCCAR	homer_1.ATTTCCTGTN	0.396314	0.209813	0.222927	0.356683	16	10	9	17	0.529412	0.562500	0.900000	R	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_21.CYTGGCABNSTGCCAR	homer_2.ACCGGAAGTG	0.451226	0.282016	0.282016	0.451226	16	10	10	16	0.625000	0.625000	1.000000	D	0	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_21.CYTGGCABNSTGCCAR	homer_3.AACCGGAAGT	0.412578	0.218424	0.232075	0.371321	16	10	9	17	0.529412	0.562500	0.900000	D	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_21.CYTGGCABNSTGCCAR	homer_4.ACAGGAAGTG	0.421205	0.263253	0.263253	0.421205	16	10	10	16	0.625000	0.625000	1.000000	D	0	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_21.CYTGGCABNSTGCCAR	homer_5.RACCGGAAGT	0.438231	0.232004	0.246505	0.394407	16	10	9	17	0.529412	0.562500	0.900000	D	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_21.CYTGGCABNSTGCCAR	homer_6.AGAGGAAGTG	0.351421	0.219638	0.219638	0.351421	16	10	10	16	0.625000	0.625000	1.000000	D	0	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_21.CYTGGCABNSTGCCAR	homer_7.NNAYTTCCTGHN	0.455615	0.294810	0.313235	0.417647	16	12	11	17	0.647059	0.687500	0.916667	R	-1	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_21.CYTGGCABNSTGCCAR	homer_8.NRYTTCCGGH	0.496900	0.310563	0.310563	0.496900	16	10	10	16	0.625000	0.625000	1.000000	R	0	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_21.CYTGGCABNSTGCCAR	homer_9.MACAGGAAGT	0.396124	0.209713	0.222820	0.356512	16	10	9	17	0.529412	0.562500	0.900000	D	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_21.CYTGGCABNSTGCCAR	homer_10.ACTTCCKGKT	0.456772	0.241820	0.256934	0.411094	16	10	9	17	0.529412	0.562500	0.900000	R	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_21.CYTGGCABNSTGCCAR	homer_11.ACVAGGAAGT	0.424195	0.224574	0.238610	0.381776	16	10	9	17	0.529412	0.562500	0.900000	D	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_21.CYTGGCABNSTGCCAR	homer_12.YCTTATCTBN	0.312432	0.165405	0.175743	0.281188	16	10	9	17	0.529412	0.562500	0.900000	D	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_21.CYTGGCABNSTGCCAR	homer_13.NBWGATAAGR	0.288106	0.152527	0.162060	0.259295	16	10	9	17	0.529412	0.562500	0.900000	R	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_21.CYTGGCABNSTGCCAR	homer_14.TGGCAGTTGG	0.534515	0.334072	0.334072	0.534515	16	10	10	16	0.625000	0.625000	1.000000	D	2	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_21.CYTGGCABNSTGCCAR	homer_15.AVCCGGAAGT	0.434521	0.230040	0.244418	0.391069	16	10	9	17	0.529412	0.562500	0.900000	D	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_21.CYTGGCABNSTGCCAR	homer_16.ANCAGGAAGT	0.431128	0.228244	0.242509	0.388015	16	10	9	17	0.529412	0.562500	0.900000	D	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_21.CYTGGCABNSTGCCAR	homer_17.SAGATAAGRV	0.314633	0.139837	0.157317	0.251707	16	10	8	18	0.444444	0.500000	0.800000	R	-2	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_21.CYTGGCABNSTGCCAR	homer_18.TGCTGAGTCA	0.297242	0.185776	0.185776	0.297242	16	10	10	16	0.625000	0.625000	1.000000	D	5	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_21.CYTGGCABNSTGCCAR	homer_19.GCTATTTTTAGC	0.580330	0.158272	0.217624	0.290165	16	12	6	22	0.272727	0.375000	0.500000	D	-6	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_21.CYTGGCABNSTGCCAR	homer_20.GGCVGTTR	0.512336	0.256168	0.256168	0.512336	16	8	8	16	0.500000	0.500000	1.000000	D	3	45
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_21.CYTGGCABNSTGCCAR	homer_21.CYTGGCABNSTGCCAR	1.000000	1.000000	1.000000	1.000000	16	16	16	16	1.000000	1.000000	1.000000	D	0	61
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_21.CYTGGCABNSTGCCAR	homer_22.BBCTTATCTS	0.312611	0.138938	0.156306	0.250089	16	10	8	18	0.444444	0.500000	0.800000	D	-2	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_21.CYTGGCABNSTGCCAR	homer_23.VACAGGAAAT	0.412613	0.218442	0.232095	0.371351	16	10	9	17	0.529412	0.562500	0.900000	D	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_21.CYTGGCABNSTGCCAR	homer_24.RGKGGGCGKGGC	0.371104	0.240126	0.255134	0.340179	16	12	11	17	0.647059	0.687500	0.916667	D	-1	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_21.CYTGGCABNSTGCCAR	homer_25.AGATAASR	0.259457	0.106835	0.113512	0.227025	16	8	7	17	0.411765	0.437500	0.875000	R	-1	45
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_21.CYTGGCABNSTGCCAR	homer_26.YGGCCCCGCCCC	0.329748	0.247311	0.247311	0.329748	16	12	12	16	0.750000	0.750000	1.000000	D	2	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_21.CYTGGCABNSTGCCAR	homer_27.AVCAGGAAGT	0.457639	0.242279	0.257422	0.411875	16	10	9	17	0.529412	0.562500	0.900000	D	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_21.CYTGGCABNSTGCCAR	homer_28.RGKGGGCGGAGC	0.385355	0.249347	0.264931	0.353242	16	12	11	17	0.647059	0.687500	0.916667	D	-1	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_21.CYTGGCABNSTGCCAR	homer_29.AWWWTGCTGAGTCAT	0.427198	0.234959	0.293699	0.313279	16	15	11	20	0.550000	0.687500	0.733333	R	-4	59
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_21.CYTGGCABNSTGCCAR	homer_30.CAAAGGTCAG	0.439617	0.274761	0.274761	0.439617	16	10	10	16	0.625000	0.625000	1.000000	R	1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_21.CYTGGCABNSTGCCAR	homer_31.VTGACTCATC	0.368786	0.230492	0.230492	0.368786	16	10	10	16	0.625000	0.625000	1.000000	R	6	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_21.CYTGGCABNSTGCCAR	homer_32.AAAGRGGAAGTG	0.353160	0.196200	0.220725	0.294300	16	12	10	18	0.555556	0.625000	0.833333	D	-2	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_21.CYTGGCABNSTGCCAR	homer_33.GRAASTGAAAST	0.190627	0.142970	0.142970	0.190627	16	12	12	16	0.750000	0.750000	1.000000	D	3	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_21.CYTGGCABNSTGCCAR	homer_34.CCCCTCCCCCAC	0.315852	0.236889	0.236889	0.315852	16	12	12	16	0.750000	0.750000	1.000000	D	4	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_21.CYTGGCABNSTGCCAR	homer_35.GAAAGTGAAAGT	0.329414	0.131766	0.164707	0.219610	16	12	8	20	0.400000	0.500000	0.666667	R	8	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_21.CYTGGCABNSTGCCAR	homer_36.DATGASTCATHN	0.289104	0.216828	0.216828	0.289104	16	12	12	16	0.750000	0.750000	1.000000	D	0	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_21.CYTGGCABNSTGCCAR	homer_37.NDATGASTCAYN	0.277476	0.208107	0.208107	0.277476	16	12	12	16	0.750000	0.750000	1.000000	R	0	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_21.CYTGGCABNSTGCCAR	homer_38.RATGASTCAT	0.338609	0.211631	0.211631	0.338609	16	10	10	16	0.625000	0.625000	1.000000	D	0	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_21.CYTGGCABNSTGCCAR	homer_39.DATGASTCAT	0.341714	0.213571	0.213571	0.341714	16	10	10	16	0.625000	0.625000	1.000000	D	6	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_21.CYTGGCABNSTGCCAR	homer_40.AGTTTCAKTTTC	0.307377	0.122951	0.153688	0.204918	16	12	8	20	0.400000	0.500000	0.666667	D	8	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_21.CYTGGCABNSTGCCAR	homer_41.NNATGASTCATH	0.270977	0.203233	0.203233	0.270977	16	12	12	16	0.750000	0.750000	1.000000	R	0	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_21.CYTGGCABNSTGCCAR	homer_42.SAAACCACAG	0.392212	0.207642	0.220619	0.352991	16	10	9	17	0.529412	0.562500	0.900000	R	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_21.CYTGGCABNSTGCCAR	homer_43.GAAASYGAAASY	0.284442	0.113777	0.142221	0.189628	16	12	8	20	0.400000	0.500000	0.666667	R	8	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_21.CYTGGCABNSTGCCAR	homer_44.AVCAGCTG	0.508585	0.169528	0.190719	0.381439	16	8	6	18	0.333333	0.375000	0.750000	R	-2	45
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_21.CYTGGCABNSTGCCAR	homer_45.SGTCACGTGR	0.532369	0.196136	0.232912	0.372658	16	10	7	19	0.368421	0.437500	0.700000	R	-3	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_21.CYTGGCABNSTGCCAR	homer_46.NATGASTCABNN	0.302924	0.227193	0.227193	0.302924	16	12	12	16	0.750000	0.750000	1.000000	D	0	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_21.CYTGGCABNSTGCCAR	homer_47.GATGASTCATCN	0.295935	0.221951	0.221951	0.295935	16	12	12	16	0.750000	0.750000	1.000000	D	0	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_21.CYTGGCABNSTGCCAR	homer_48.AGTTTCASTTTC	0.322276	0.128910	0.161138	0.214851	16	12	8	20	0.400000	0.500000	0.666667	D	8	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_21.CYTGGCABNSTGCCAR	homer_49.RCAGGATGTGGT	0.310161	0.232621	0.232621	0.310161	16	12	12	16	0.750000	0.750000	1.000000	D	0	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_21.CYTGGCABNSTGCCAR	homer_50.GGGGGAATCCCC	0.399196	0.299397	0.299397	0.399196	16	12	12	16	0.750000	0.750000	1.000000	R	2	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_21.CYTGGCABNSTGCCAR	homer_51.GCTGTGGTTW	0.405756	0.180336	0.202878	0.324605	16	10	8	18	0.444444	0.500000	0.800000	D	-2	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_21.CYTGGCABNSTGCCAR	homer_52.GGATGACTCATC	0.329962	0.213505	0.226849	0.302466	16	12	11	17	0.647059	0.687500	0.916667	D	-1	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_21.CYTGGCABNSTGCCAR	homer_53.NWAACCACADNN	0.466120	0.220794	0.262192	0.349590	16	12	9	19	0.473684	0.562500	0.750000	R	-3	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_21.CYTGGCABNSTGCCAR	homer_54.ACCATCTGTT	0.288508	0.180317	0.180317	0.288508	16	10	10	16	0.625000	0.625000	1.000000	D	4	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_21.CYTGGCABNSTGCCAR	homer_55.SVYTTCCNGGAARB	0.618763	0.309382	0.386727	0.441974	16	14	10	20	0.500000	0.625000	0.714286	R	-4	57
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_21.CYTGGCABNSTGCCAR	homer_56.SCCTAGCAACAG	0.519373	0.336065	0.357069	0.476091	16	12	11	17	0.647059	0.687500	0.916667	D	-1	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_21.CYTGGCABNSTGCCAR	homer_57.AAACCACARM	0.427427	0.189968	0.213713	0.341942	16	10	8	18	0.444444	0.500000	0.800000	R	-2	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_21.CYTGGCABNSTGCCAR	homer_58.RTTATGYAAB	0.265540	0.165963	0.165963	0.265540	16	10	10	16	0.625000	0.625000	1.000000	D	6	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_21.CYTGGCABNSTGCCAR	homer_59.NYTTCCWGGAAR	0.587277	0.278184	0.330343	0.440457	16	12	9	19	0.473684	0.562500	0.750000	R	-3	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_21.CYTGGCABNSTGCCAR	homer_60.ASWTCCTGBT	0.482061	0.255209	0.271159	0.433855	16	10	9	17	0.529412	0.562500	0.900000	R	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_21.CYTGGCABNSTGCCAR	homer_61.DGGGYGKGGC	0.327786	0.204866	0.204866	0.327786	16	10	10	16	0.625000	0.625000	1.000000	D	1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_21.CYTGGCABNSTGCCAR	homer_62.TWGTCTGV	0.578884	0.289442	0.289442	0.578884	16	8	8	16	0.500000	0.500000	1.000000	R	8	45
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_21.CYTGGCABNSTGCCAR	homer_63.CTGGCAGSCTGCCA	0.945487	0.827301	0.827301	0.945487	16	14	14	16	0.875000	0.875000	1.000000	R	2	57
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_21.CYTGGCABNSTGCCAR	homer_64.VGGGRATTYCCC	0.503316	0.377487	0.377487	0.503316	16	12	12	16	0.750000	0.750000	1.000000	D	2	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_21.CYTGGCABNSTGCCAR	homer_65.CARRGKBCAAAGTYCA	0.318976	0.281450	0.299040	0.299040	16	16	15	17	0.882353	0.937500	0.937500	D	-1	61
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_21.CYTGGCABNSTGCCAR	homer_66.CCATTGTTNY	0.366590	0.162929	0.183295	0.293272	16	10	8	18	0.444444	0.500000	0.800000	D	-2	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_21.CYTGGCABNSTGCCAR	homer_67.CYAAAAATAG	0.619275	0.147446	0.193523	0.309637	16	10	5	21	0.238095	0.312500	0.500000	R	-5	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_21.CYTGGCABNSTGCCAR	homer_68.GGGGGGGG	0.415900	0.207950	0.207950	0.415900	16	8	8	16	0.500000	0.500000	1.000000	R	6	45
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_21.CYTGGCABNSTGCCAR	homer_69.TTGAMCTTTG	0.490513	0.306570	0.306570	0.490513	16	10	10	16	0.625000	0.625000	1.000000	D	1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_21.CYTGGCABNSTGCCAR	homer_70.MGGAAGTGAAAC	0.255647	0.191736	0.191736	0.255647	16	12	12	16	0.750000	0.750000	1.000000	D	2	53
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_21.CYTGGCABNSTGCCAR	homer_71.HACTTCCGGY	0.456180	0.285113	0.285113	0.456180	16	10	10	16	0.625000	0.625000	1.000000	R	0	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_21.CYTGGCABNSTGCCAR	homer_72.NRYTTCCGGY	0.455646	0.284779	0.284779	0.455646	16	10	10	16	0.625000	0.625000	1.000000	R	0	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_21.CYTGGCABNSTGCCAR	homer_73.AWWNTGCTGAGTCAT	0.364164	0.200290	0.250363	0.267054	16	15	11	20	0.550000	0.687500	0.733333	R	-4	59
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_21.CYTGGCABNSTGCCAR	homer_74.AGGCCTAG	0.624864	0.312432	0.312432	0.624864	16	8	8	16	0.500000	0.500000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_21.CYTGGCABNSTGCCAR	homer_75.VTTACGTAAYNNNNN	0.154267	0.144625	0.144625	0.154267	16	15	15	16	0.937500	0.937500	1.000000	R	1	59
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_21.CYTGGCABNSTGCCAR	homer_76.TGCTGACTCA	0.469507	0.248563	0.264098	0.422556	16	10	9	17	0.529412	0.562500	0.900000	D	-1	49
hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_21.CYTGGCABNSTGCCAR	homer_77.ATTGCGCAAC	0.323621	0.202263	0.202263	0.323621	16	10	10	16	0.625000	0.625000	1.000000	D	6	49
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_22.BBCTTATCTS	homer_1.ATTTCCTGTN	0.395617	0.263745	0.316494	0.316494	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_22.BBCTTATCTS	homer_2.ACCGGAAGTG	0.261746	0.174497	0.209397	0.209397	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_22.BBCTTATCTS	homer_3.AACCGGAAGT	0.178157	0.145765	0.160341	0.160341	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_22.BBCTTATCTS	homer_4.ACAGGAAGTG	0.207254	0.169572	0.186529	0.186529	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_22.BBCTTATCTS	homer_5.RACCGGAAGT	0.155628	0.127332	0.140065	0.140065	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_22.BBCTTATCTS	homer_6.AGAGGAAGTG	0.278550	0.227905	0.250695	0.250695	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_22.BBCTTATCTS	homer_7.NNAYTTCCTGHN	0.366837	0.253964	0.330153	0.275127	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_22.BBCTTATCTS	homer_8.NRYTTCCGGH	0.359147	0.239432	0.287318	0.287318	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_22.BBCTTATCTS	homer_9.MACAGGAAGT	0.348672	0.232448	0.278937	0.278937	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_22.BBCTTATCTS	homer_10.ACTTCCKGKT	0.367388	0.197824	0.257172	0.257172	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_22.BBCTTATCTS	homer_11.ACVAGGAAGT	0.540356	0.290961	0.378249	0.378249	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_22.BBCTTATCTS	homer_12.YCTTATCTBN	0.996150	0.815032	0.896535	0.896535	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_22.BBCTTATCTS	homer_13.NBWGATAAGR	0.985029	0.805933	0.886526	0.886526	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_22.BBCTTATCTS	homer_14.TGGCAGTTGG	0.414961	0.223441	0.290473	0.290473	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_22.BBCTTATCTS	homer_15.AVCCGGAAGT	0.186048	0.152221	0.167443	0.167443	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_22.BBCTTATCTS	homer_16.ANCAGGAAGT	0.557173	0.300016	0.390021	0.390021	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_22.BBCTTATCTS	homer_17.SAGATAAGRV	0.997290	0.997290	0.997290	0.997290	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_22.BBCTTATCTS	homer_18.TGCTGAGTCA	0.384049	0.314222	0.345644	0.345644	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_22.BBCTTATCTS	homer_19.GCTATTTTTAGC	0.472578	0.270045	0.378063	0.315052	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_22.BBCTTATCTS	homer_20.GGCVGTTR	0.563624	0.281812	0.338174	0.422718	10	8	6	12	0.500000	0.600000	0.750000	D	-2	33
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_22.BBCTTATCTS	homer_21.CYTGGCABNSTGCCAR	0.312611	0.138938	0.250089	0.156306	10	16	8	18	0.444444	0.800000	0.500000	D	2	49
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_22.BBCTTATCTS	homer_22.BBCTTATCTS	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_22.BBCTTATCTS	homer_23.VACAGGAAAT	0.352444	0.234962	0.281955	0.281955	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_22.BBCTTATCTS	homer_24.RGKGGGCGKGGC	0.343854	0.076412	0.137542	0.114618	10	12	4	18	0.222222	0.400000	0.333333	R	-8	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_22.BBCTTATCTS	homer_25.AGATAASR	0.960490	0.768392	0.768392	0.960490	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_22.BBCTTATCTS	homer_26.YGGCCCCGCCCC	0.472892	0.074667	0.141868	0.118223	10	12	3	19	0.157895	0.300000	0.250000	D	-9	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_22.BBCTTATCTS	homer_27.AVCAGGAAGT	0.452082	0.243429	0.316457	0.316457	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_22.BBCTTATCTS	homer_28.RGKGGGCGGAGC	0.155777	0.107846	0.140199	0.116833	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_22.BBCTTATCTS	homer_29.AWWWTGCTGAGTCAT	0.374275	0.249516	0.374275	0.249516	10	15	10	15	0.666667	1.000000	0.666667	R	-2	47
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_22.BBCTTATCTS	homer_30.CAAAGGTCAG	0.469563	0.313042	0.375650	0.375650	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_22.BBCTTATCTS	homer_31.VTGACTCATC	0.407422	0.271615	0.325938	0.325938	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_22.BBCTTATCTS	homer_32.AAAGRGGAAGTG	0.280941	0.234117	0.280941	0.234117	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_22.BBCTTATCTS	homer_33.GRAASTGAAAST	0.459587	0.262621	0.367669	0.306391	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_22.BBCTTATCTS	homer_34.CCCCTCCCCCAC	0.213117	0.177597	0.213117	0.177597	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_22.BBCTTATCTS	homer_35.GAAAGTGAAAGT	0.325353	0.271128	0.325353	0.271128	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_22.BBCTTATCTS	homer_36.DATGASTCATHN	0.357370	0.247410	0.321633	0.268028	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_22.BBCTTATCTS	homer_37.NDATGASTCAYN	0.347290	0.240431	0.312561	0.260467	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_22.BBCTTATCTS	homer_38.RATGASTCAT	0.397996	0.265331	0.318397	0.318397	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_22.BBCTTATCTS	homer_39.DATGASTCAT	0.382756	0.255171	0.306205	0.306205	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_22.BBCTTATCTS	homer_40.AGTTTCAKTTTC	0.390826	0.223329	0.312661	0.260551	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_22.BBCTTATCTS	homer_41.NNATGASTCATH	0.372512	0.257893	0.335261	0.279384	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_22.BBCTTATCTS	homer_42.SAAACCACAG	0.239026	0.239026	0.239026	0.239026	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_22.BBCTTATCTS	homer_43.GAAASYGAAASY	0.395815	0.226180	0.316652	0.263877	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_22.BBCTTATCTS	homer_44.AVCAGCTG	0.409794	0.204897	0.245876	0.307345	10	8	6	12	0.500000	0.600000	0.750000	R	4	33
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_22.BBCTTATCTS	homer_45.SGTCACGTGR	0.188304	0.154067	0.169474	0.169474	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_22.BBCTTATCTS	homer_46.NATGASTCABNN	0.340629	0.235820	0.306566	0.255472	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_22.BBCTTATCTS	homer_47.GATGASTCATCN	0.354488	0.245415	0.319039	0.265866	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_22.BBCTTATCTS	homer_48.AGTTTCASTTTC	0.287256	0.239380	0.287256	0.239380	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_22.BBCTTATCTS	homer_49.RCAGGATGTGGT	0.306039	0.255033	0.306039	0.255033	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_22.BBCTTATCTS	homer_50.GGGGGAATCCCC	0.192808	0.160673	0.192808	0.160673	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_22.BBCTTATCTS	homer_51.GCTGTGGTTW	0.438263	0.187827	0.262958	0.262958	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_22.BBCTTATCTS	homer_52.GGATGACTCATC	0.372001	0.257539	0.334801	0.279001	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_22.BBCTTATCTS	homer_53.NWAACCACADNN	0.211215	0.176012	0.211215	0.176012	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_22.BBCTTATCTS	homer_54.ACCATCTGTT	0.448756	0.299171	0.359005	0.359005	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_22.BBCTTATCTS	homer_55.SVYTTCCNGGAARB	0.305208	0.218006	0.305208	0.218006	10	14	10	14	0.714286	1.000000	0.714286	D	0	45
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_22.BBCTTATCTS	homer_56.SCCTAGCAACAG	0.272148	0.226790	0.272148	0.226790	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_22.BBCTTATCTS	homer_57.AAACCACARM	0.414814	0.177777	0.248888	0.248888	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_22.BBCTTATCTS	homer_58.RTTATGYAAB	0.537701	0.358467	0.430161	0.430161	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_22.BBCTTATCTS	homer_59.NYTTCCWGGAAR	0.272723	0.188808	0.245450	0.204542	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_22.BBCTTATCTS	homer_60.ASWTCCTGBT	0.228129	0.186651	0.205316	0.205316	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_22.BBCTTATCTS	homer_61.DGGGYGKGGC	0.132296	0.132296	0.132296	0.132296	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_22.BBCTTATCTS	homer_62.TWGTCTGV	0.497557	0.316627	0.348290	0.435363	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_22.BBCTTATCTS	homer_63.CTGGCAGSCTGCCA	0.168500	0.120357	0.168500	0.120357	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_22.BBCTTATCTS	homer_64.VGGGRATTYCCC	0.188775	0.130690	0.169897	0.141581	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_22.BBCTTATCTS	homer_65.CARRGKBCAAAGTYCA	0.318128	0.198830	0.318128	0.198830	10	16	10	16	0.625000	1.000000	0.625000	R	-4	49
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_22.BBCTTATCTS	homer_66.CCATTGTTNY	0.465769	0.465769	0.465769	0.465769	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_22.BBCTTATCTS	homer_67.CYAAAAATAG	0.280937	0.280937	0.280937	0.280937	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_22.BBCTTATCTS	homer_68.GGGGGGGG	0.741695	0.148339	0.222509	0.278136	10	8	3	15	0.200000	0.300000	0.375000	R	-5	33
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_22.BBCTTATCTS	homer_69.TTGAMCTTTG	0.444843	0.296562	0.355874	0.355874	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_22.BBCTTATCTS	homer_70.MGGAAGTGAAAC	0.378258	0.315215	0.378258	0.315215	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_22.BBCTTATCTS	homer_71.HACTTCCGGY	0.277198	0.184799	0.221758	0.221758	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_22.BBCTTATCTS	homer_72.NRYTTCCGGY	0.335225	0.223484	0.268180	0.268180	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_22.BBCTTATCTS	homer_73.AWWNTGCTGAGTCAT	0.374555	0.249704	0.374555	0.249704	10	15	10	15	0.666667	1.000000	0.666667	R	-2	47
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_22.BBCTTATCTS	homer_74.AGGCCTAG	0.581408	0.166117	0.232563	0.290704	10	8	4	14	0.285714	0.400000	0.500000	R	-4	33
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_22.BBCTTATCTS	homer_75.VTTACGTAAYNNNNN	0.488815	0.325877	0.488815	0.325877	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_22.BBCTTATCTS	homer_76.TGCTGACTCA	0.348912	0.285474	0.314021	0.314021	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_22.BBCTTATCTS	homer_77.ATTGCGCAAC	0.241885	0.161257	0.193508	0.193508	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_23.VACAGGAAAT	homer_1.ATTTCCTGTN	0.970370	0.970370	0.970370	0.970370	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_23.VACAGGAAAT	homer_2.ACCGGAAGTG	0.865001	0.707728	0.778501	0.778501	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_23.VACAGGAAAT	homer_3.AACCGGAAGT	0.813726	0.813726	0.813726	0.813726	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_23.VACAGGAAAT	homer_4.ACAGGAAGTG	0.916055	0.749499	0.824449	0.824449	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_23.VACAGGAAAT	homer_5.RACCGGAAGT	0.884201	0.884201	0.884201	0.884201	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_23.VACAGGAAAT	homer_6.AGAGGAAGTG	0.790293	0.646603	0.711264	0.711264	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_23.VACAGGAAAT	homer_7.NNAYTTCCTGHN	0.914367	0.761973	0.914367	0.761973	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_23.VACAGGAAAT	homer_8.NRYTTCCGGH	0.868796	0.710833	0.781917	0.781917	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_23.VACAGGAAAT	homer_9.MACAGGAAGT	0.942579	0.942579	0.942579	0.942579	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_23.VACAGGAAAT	homer_10.ACTTCCKGKT	0.866237	0.866237	0.866237	0.866237	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_23.VACAGGAAAT	homer_11.ACVAGGAAGT	0.764316	0.764316	0.764316	0.764316	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_23.VACAGGAAAT	homer_12.YCTTATCTBN	0.329066	0.269235	0.296159	0.296159	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_23.VACAGGAAAT	homer_13.NBWGATAAGR	0.306254	0.250571	0.275629	0.275629	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_23.VACAGGAAAT	homer_14.TGGCAGTTGG	0.339132	0.277471	0.305219	0.305219	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_23.VACAGGAAAT	homer_15.AVCCGGAAGT	0.801340	0.801340	0.801340	0.801340	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_23.VACAGGAAAT	homer_16.ANCAGGAAGT	0.856460	0.856460	0.856460	0.856460	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_23.VACAGGAAAT	homer_17.SAGATAAGRV	0.364839	0.243226	0.291871	0.291871	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_23.VACAGGAAAT	homer_18.TGCTGAGTCA	0.537209	0.289266	0.376046	0.376046	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_23.VACAGGAAAT	homer_19.GCTATTTTTAGC	0.431388	0.298653	0.388249	0.323541	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_23.VACAGGAAAT	homer_20.GGCVGTTR	0.320132	0.256106	0.256106	0.320132	10	8	8	10	0.800000	0.800000	1.000000	D	0	33
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_23.VACAGGAAAT	homer_21.CYTGGCABNSTGCCAR	0.412613	0.218442	0.371351	0.232095	10	16	9	17	0.529412	0.900000	0.562500	D	1	49
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_23.VACAGGAAAT	homer_22.BBCTTATCTS	0.352444	0.234962	0.281955	0.281955	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_23.VACAGGAAAT	homer_23.VACAGGAAAT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_23.VACAGGAAAT	homer_24.RGKGGGCGKGGC	0.226705	0.156950	0.204035	0.170029	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_23.VACAGGAAAT	homer_25.AGATAASR	0.362035	0.230386	0.253424	0.316780	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_23.VACAGGAAAT	homer_26.YGGCCCCGCCCC	0.240815	0.200679	0.240815	0.200679	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_23.VACAGGAAAT	homer_27.AVCAGGAAGT	0.872310	0.872310	0.872310	0.872310	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_23.VACAGGAAAT	homer_28.RGKGGGCGGAGC	0.237325	0.164302	0.213592	0.177994	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_23.VACAGGAAAT	homer_29.AWWWTGCTGAGTCAT	0.489339	0.326226	0.489339	0.326226	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_23.VACAGGAAAT	homer_30.CAAAGGTCAG	0.307363	0.307363	0.307363	0.307363	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_23.VACAGGAAAT	homer_31.VTGACTCATC	0.440244	0.188676	0.264146	0.264146	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_23.VACAGGAAAT	homer_32.AAAGRGGAAGTG	0.750636	0.625530	0.750636	0.625530	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_23.VACAGGAAAT	homer_33.GRAASTGAAAST	0.543945	0.453287	0.543945	0.453287	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_23.VACAGGAAAT	homer_34.CCCCTCCCCCAC	0.199006	0.165838	0.199006	0.165838	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_23.VACAGGAAAT	homer_35.GAAAGTGAAAGT	0.528122	0.440101	0.528122	0.440101	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_23.VACAGGAAAT	homer_36.DATGASTCATHN	0.330689	0.154321	0.231482	0.192902	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_23.VACAGGAAAT	homer_37.NDATGASTCAYN	0.336235	0.156910	0.235365	0.196137	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_23.VACAGGAAAT	homer_38.RATGASTCAT	0.163438	0.163438	0.163438	0.163438	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_23.VACAGGAAAT	homer_39.DATGASTCAT	0.474082	0.158027	0.237041	0.237041	10	10	5	15	0.333333	0.500000	0.500000	D	-5	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_23.VACAGGAAAT	homer_40.AGTTTCAKTTTC	0.538537	0.448781	0.538537	0.448781	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_23.VACAGGAAAT	homer_41.NNATGASTCATH	0.330857	0.154400	0.231600	0.193000	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_23.VACAGGAAAT	homer_42.SAAACCACAG	0.742647	0.247549	0.371324	0.371324	10	10	5	15	0.333333	0.500000	0.500000	D	-5	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_23.VACAGGAAAT	homer_43.GAAASYGAAASY	0.549961	0.458301	0.549961	0.458301	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_23.VACAGGAAAT	homer_44.AVCAGCTG	0.348945	0.279156	0.279156	0.348945	10	8	8	10	0.800000	0.800000	1.000000	D	0	33
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_23.VACAGGAAAT	homer_45.SGTCACGTGR	0.292090	0.238983	0.262881	0.262881	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_23.VACAGGAAAT	homer_46.NATGASTCABNN	0.351130	0.163861	0.245791	0.204826	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_23.VACAGGAAAT	homer_47.GATGASTCATCN	0.350780	0.163697	0.245546	0.204621	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_23.VACAGGAAAT	homer_48.AGTTTCASTTTC	0.535975	0.446646	0.535975	0.446646	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_23.VACAGGAAAT	homer_49.RCAGGATGTGGT	0.777790	0.538470	0.700011	0.583342	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_23.VACAGGAAAT	homer_50.GGGGGAATCCCC	0.418368	0.289639	0.376531	0.313776	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_23.VACAGGAAAT	homer_51.GCTGTGGTTW	0.642855	0.275509	0.385713	0.385713	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_23.VACAGGAAAT	homer_52.GGATGACTCATC	0.220833	0.152884	0.198749	0.165624	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_23.VACAGGAAAT	homer_53.NWAACCACADNN	0.303427	0.252856	0.303427	0.252856	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_23.VACAGGAAAT	homer_54.ACCATCTGTT	0.331879	0.331879	0.331879	0.331879	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_23.VACAGGAAAT	homer_55.SVYTTCCNGGAARB	0.712011	0.508579	0.712011	0.508579	10	14	10	14	0.714286	1.000000	0.714286	D	-4	45
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_23.VACAGGAAAT	homer_56.SCCTAGCAACAG	0.371905	0.309921	0.371905	0.309921	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_23.VACAGGAAAT	homer_57.AAACCACARM	0.331017	0.270832	0.297916	0.297916	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_23.VACAGGAAAT	homer_58.RTTATGYAAB	0.269975	0.269975	0.269975	0.269975	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_23.VACAGGAAAT	homer_59.NYTTCCWGGAAR	0.697775	0.581479	0.697775	0.581479	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_23.VACAGGAAAT	homer_60.ASWTCCTGBT	0.834536	0.834536	0.834536	0.834536	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_23.VACAGGAAAT	homer_61.DGGGYGKGGC	0.345839	0.186221	0.242088	0.242088	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_23.VACAGGAAAT	homer_62.TWGTCTGV	0.378421	0.302737	0.302737	0.378421	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_23.VACAGGAAAT	homer_63.CTGGCAGSCTGCCA	0.491108	0.245554	0.392887	0.280633	10	14	8	16	0.500000	0.800000	0.571429	D	2	45
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_23.VACAGGAAAT	homer_64.VGGGRATTYCCC	0.646562	0.301729	0.452594	0.377161	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_23.VACAGGAAAT	homer_65.CARRGKBCAAAGTYCA	0.227799	0.142374	0.227799	0.142374	10	16	10	16	0.625000	1.000000	0.625000	D	-2	49
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_23.VACAGGAAAT	homer_66.CCATTGTTNY	0.297378	0.243309	0.267640	0.267640	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_23.VACAGGAAAT	homer_67.CYAAAAATAG	0.561103	0.374069	0.448882	0.448882	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_23.VACAGGAAAT	homer_68.GGGGGGGG	0.364709	0.182355	0.218826	0.273532	10	8	6	12	0.500000	0.600000	0.750000	D	-2	33
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_23.VACAGGAAAT	homer_69.TTGAMCTTTG	0.288783	0.288783	0.288783	0.288783	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_23.VACAGGAAAT	homer_70.MGGAAGTGAAAC	0.877943	0.409707	0.614560	0.512133	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_23.VACAGGAAAT	homer_71.HACTTCCGGY	0.845054	0.691408	0.760548	0.760548	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_23.VACAGGAAAT	homer_72.NRYTTCCGGY	0.841269	0.688311	0.757142	0.757142	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_23.VACAGGAAAT	homer_73.AWWNTGCTGAGTCAT	0.500735	0.333824	0.500735	0.333824	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_23.VACAGGAAAT	homer_74.AGGCCTAG	0.259794	0.207835	0.207835	0.259794	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_23.VACAGGAAAT	homer_75.VTTACGTAAYNNNNN	0.213637	0.142425	0.213637	0.142425	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_23.VACAGGAAAT	homer_76.TGCTGACTCA	0.551276	0.296841	0.385893	0.385893	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_23.VACAGGAAAT	homer_77.ATTGCGCAAC	0.203632	0.203632	0.203632	0.203632	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_24.RGKGGGCGKGGC	homer_1.ATTTCCTGTN	0.221067	0.153047	0.165800	0.198961	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_24.RGKGGGCGKGGC	homer_2.ACCGGAAGTG	0.359987	0.299989	0.299989	0.359987	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_24.RGKGGGCGKGGC	homer_3.AACCGGAAGT	0.364793	0.252549	0.273595	0.328314	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_24.RGKGGGCGKGGC	homer_4.ACAGGAAGTG	0.440519	0.367099	0.367099	0.440519	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_24.RGKGGGCGKGGC	homer_5.RACCGGAAGT	0.382128	0.264550	0.286596	0.343915	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_24.RGKGGGCGKGGC	homer_6.AGAGGAAGTG	0.526643	0.438869	0.438869	0.526643	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_24.RGKGGGCGKGGC	homer_7.NNAYTTCCTGHN	0.350579	0.296644	0.321364	0.321364	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_24.RGKGGGCGKGGC	homer_8.NRYTTCCGGH	0.365139	0.304282	0.304282	0.365139	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_24.RGKGGGCGKGGC	homer_9.MACAGGAAGT	0.336416	0.232903	0.252312	0.302774	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_24.RGKGGGCGKGGC	homer_10.ACTTCCKGKT	0.417832	0.289268	0.313374	0.376049	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_24.RGKGGGCGKGGC	homer_11.ACVAGGAAGT	0.418298	0.289591	0.313723	0.376468	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_24.RGKGGGCGKGGC	homer_12.YCTTATCTBN	0.473625	0.074783	0.118406	0.142088	12	10	3	19	0.157895	0.250000	0.300000	R	-7	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_24.RGKGGGCGKGGC	homer_13.NBWGATAAGR	0.720267	0.072027	0.120044	0.144053	12	10	2	20	0.100000	0.166667	0.200000	D	10	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_24.RGKGGGCGKGGC	homer_14.TGGCAGTTGG	0.366445	0.305371	0.305371	0.366445	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_24.RGKGGGCGKGGC	homer_15.AVCCGGAAGT	0.356245	0.246631	0.267184	0.320621	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_24.RGKGGGCGKGGC	homer_16.ANCAGGAAGT	0.388232	0.268776	0.291174	0.349408	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_24.RGKGGGCGKGGC	homer_17.SAGATAAGRV	0.372396	0.082755	0.124132	0.148958	12	10	4	18	0.222222	0.333333	0.400000	D	-6	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_24.RGKGGGCGKGGC	homer_18.TGCTGAGTCA	0.240411	0.166438	0.180308	0.216370	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_24.RGKGGGCGKGGC	homer_19.GCTATTTTTAGC	0.899607	0.081782	0.149934	0.149934	12	12	2	22	0.090909	0.166667	0.166667	R	10	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_24.RGKGGGCGKGGC	homer_20.GGCVGTTR	0.410481	0.273654	0.273654	0.410481	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_24.RGKGGGCGKGGC	homer_21.CYTGGCABNSTGCCAR	0.371104	0.240126	0.340179	0.255134	12	16	11	17	0.647059	0.916667	0.687500	D	1	53
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_24.RGKGGGCGKGGC	homer_22.BBCTTATCTS	0.343854	0.076412	0.114618	0.137542	12	10	4	18	0.222222	0.333333	0.400000	R	-6	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_24.RGKGGGCGKGGC	homer_23.VACAGGAAAT	0.226705	0.156950	0.170029	0.204035	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_24.RGKGGGCGKGGC	homer_24.RGKGGGCGKGGC	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_24.RGKGGGCGKGGC	homer_25.AGATAASR	0.185442	0.046360	0.061814	0.092721	12	8	4	16	0.250000	0.333333	0.500000	D	8	37
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_24.RGKGGGCGKGGC	homer_26.YGGCCCCGCCCC	0.939364	0.670975	0.782804	0.782804	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_24.RGKGGGCGKGGC	homer_27.AVCAGGAAGT	0.367054	0.254114	0.275290	0.330348	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_24.RGKGGGCGKGGC	homer_28.RGKGGGCGGAGC	0.898689	0.898689	0.898689	0.898689	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_24.RGKGGGCGKGGC	homer_29.AWWWTGCTGAGTCAT	0.202038	0.161631	0.202038	0.161631	12	15	12	15	0.800000	1.000000	0.800000	D	-1	51
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_24.RGKGGGCGKGGC	homer_30.CAAAGGTCAG	0.344234	0.238316	0.258175	0.309810	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_24.RGKGGGCGKGGC	homer_31.VTGACTCATC	0.247731	0.141561	0.165154	0.198185	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_24.RGKGGGCGKGGC	homer_32.AAAGRGGAAGTG	0.465863	0.332759	0.388219	0.388219	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_24.RGKGGGCGKGGC	homer_33.GRAASTGAAAST	0.260129	0.156077	0.195097	0.195097	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_24.RGKGGGCGKGGC	homer_34.CCCCTCCCCCAC	0.761618	0.644446	0.698149	0.698149	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_24.RGKGGGCGKGGC	homer_35.GAAAGTGAAAGT	0.205878	0.123527	0.154408	0.154408	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_24.RGKGGGCGKGGC	homer_36.DATGASTCATHN	0.304034	0.125191	0.177353	0.177353	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_24.RGKGGGCGKGGC	homer_37.NDATGASTCAYN	0.363760	0.121253	0.181880	0.181880	12	12	6	18	0.333333	0.500000	0.500000	R	6	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_24.RGKGGGCGKGGC	homer_38.RATGASTCAT	0.326852	0.122570	0.163426	0.196111	12	10	6	16	0.375000	0.500000	0.600000	D	6	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_24.RGKGGGCGKGGC	homer_39.DATGASTCAT	0.304935	0.114351	0.152467	0.182961	12	10	6	16	0.375000	0.500000	0.600000	D	6	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_24.RGKGGGCGKGGC	homer_40.AGTTTCAKTTTC	0.112524	0.067514	0.084393	0.084393	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_24.RGKGGGCGKGGC	homer_41.NNATGASTCATH	0.268762	0.110667	0.156778	0.156778	12	12	7	17	0.411765	0.583333	0.583333	D	5	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_24.RGKGGGCGKGGC	homer_42.SAAACCACAG	0.405264	0.280567	0.303948	0.364737	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_24.RGKGGGCGKGGC	homer_43.GAAASYGAAASY	0.156140	0.093684	0.117105	0.117105	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_24.RGKGGGCGKGGC	homer_44.AVCAGCTG	0.265074	0.142732	0.154627	0.231940	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_24.RGKGGGCGKGGC	homer_45.SGTCACGTGR	0.303006	0.252505	0.252505	0.303006	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_24.RGKGGGCGKGGC	homer_46.NATGASTCABNN	0.324585	0.133652	0.189341	0.189341	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_24.RGKGGGCGKGGC	homer_47.GATGASTCATCN	0.235609	0.141365	0.176706	0.176706	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_24.RGKGGGCGKGGC	homer_48.AGTTTCASTTTC	0.105442	0.089220	0.096655	0.096655	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_24.RGKGGGCGKGGC	homer_49.RCAGGATGTGGT	0.528332	0.528332	0.528332	0.528332	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_24.RGKGGGCGKGGC	homer_50.GGGGGAATCCCC	0.484880	0.410283	0.444473	0.444473	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_24.RGKGGGCGKGGC	homer_51.GCTGTGGTTW	0.437517	0.250010	0.291678	0.350014	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_24.RGKGGGCGKGGC	homer_52.GGATGACTCATC	0.351855	0.144882	0.205249	0.205249	12	12	7	17	0.411765	0.583333	0.583333	D	5	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_24.RGKGGGCGKGGC	homer_53.NWAACCACADNN	0.485335	0.291201	0.364001	0.364001	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_24.RGKGGGCGKGGC	homer_54.ACCATCTGTT	0.399410	0.186391	0.232989	0.279587	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_24.RGKGGGCGKGGC	homer_55.SVYTTCCNGGAARB	0.184132	0.115082	0.153443	0.131523	12	14	10	16	0.625000	0.833333	0.714286	R	-4	49
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_24.RGKGGGCGKGGC	homer_56.SCCTAGCAACAG	0.312846	0.264716	0.286776	0.286776	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_24.RGKGGGCGKGGC	homer_57.AAACCACARM	0.440524	0.251728	0.293683	0.352420	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_24.RGKGGGCGKGGC	homer_58.RTTATGYAAB	0.315338	0.092746	0.131391	0.157669	12	10	5	17	0.294118	0.416667	0.500000	R	7	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_24.RGKGGGCGKGGC	homer_59.NYTTCCWGGAAR	0.168931	0.101359	0.126698	0.126698	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_24.RGKGGGCGKGGC	homer_60.ASWTCCTGBT	0.268104	0.185610	0.201078	0.241293	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_24.RGKGGGCGKGGC	homer_61.DGGGYGKGGC	0.952080	0.793400	0.793400	0.952080	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_24.RGKGGGCGKGGC	homer_62.TWGTCTGV	0.277896	0.185264	0.185264	0.277896	12	8	8	12	0.666667	0.666667	1.000000	D	2	37
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_24.RGKGGGCGKGGC	homer_63.CTGGCAGSCTGCCA	0.301179	0.220864	0.276080	0.236640	12	14	11	15	0.733333	0.916667	0.785714	D	1	49
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_24.RGKGGGCGKGGC	homer_64.VGGGRATTYCCC	0.506369	0.361692	0.421974	0.421974	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_24.RGKGGGCGKGGC	homer_65.CARRGKBCAAAGTYCA	0.225082	0.168812	0.225082	0.168812	12	16	12	16	0.750000	1.000000	0.750000	D	-1	53
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_24.RGKGGGCGKGGC	homer_66.CCATTGTTNY	0.859148	0.085915	0.143191	0.171830	12	10	2	20	0.100000	0.166667	0.200000	R	-8	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_24.RGKGGGCGKGGC	homer_67.CYAAAAATAG	0.398090	0.117085	0.165871	0.199045	12	10	5	17	0.294118	0.416667	0.500000	R	-5	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_24.RGKGGGCGKGGC	homer_68.GGGGGGGG	0.824002	0.549334	0.549334	0.824002	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_24.RGKGGGCGKGGC	homer_69.TTGAMCTTTG	0.229194	0.158673	0.171895	0.206275	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_24.RGKGGGCGKGGC	homer_70.MGGAAGTGAAAC	0.356066	0.254333	0.296722	0.296722	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_24.RGKGGGCGKGGC	homer_71.HACTTCCGGY	0.320007	0.266672	0.266672	0.320007	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_24.RGKGGGCGKGGC	homer_72.NRYTTCCGGY	0.259642	0.216368	0.216368	0.259642	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_24.RGKGGGCGKGGC	homer_73.AWWNTGCTGAGTCAT	0.215846	0.172677	0.215846	0.172677	12	15	12	15	0.800000	1.000000	0.800000	D	-1	51
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_24.RGKGGGCGKGGC	homer_74.AGGCCTAG	0.477724	0.318483	0.318483	0.477724	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_24.RGKGGGCGKGGC	homer_75.VTTACGTAAYNNNNN	0.191178	0.112457	0.159315	0.127452	12	15	10	17	0.588235	0.833333	0.666667	R	2	51
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_24.RGKGGGCGKGGC	homer_76.TGCTGACTCA	0.275452	0.157401	0.183635	0.220362	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_24.RGKGGGCGKGGC	homer_77.ATTGCGCAAC	0.456295	0.134204	0.190123	0.228147	12	10	5	17	0.294118	0.416667	0.500000	R	7	41
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_25.AGATAASR	homer_1.ATTTCCTGTN	0.377161	0.240011	0.330016	0.264012	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_25.AGATAASR	homer_2.ACCGGAAGTG	0.268725	0.171007	0.235135	0.188108	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_25.AGATAASR	homer_3.AACCGGAAGT	0.407756	0.116502	0.203878	0.163102	8	10	4	14	0.285714	0.500000	0.400000	D	4	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_25.AGATAASR	homer_4.ACAGGAAGTG	0.219883	0.175906	0.219883	0.175906	8	10	8	10	0.800000	1.000000	0.800000	D	-2	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_25.AGATAASR	homer_5.RACCGGAAGT	0.475880	0.135966	0.237940	0.190352	8	10	4	14	0.285714	0.500000	0.400000	D	4	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_25.AGATAASR	homer_6.AGAGGAAGTG	0.333857	0.267085	0.333857	0.267085	8	10	8	10	0.800000	1.000000	0.800000	D	0	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_25.AGATAASR	homer_7.NNAYTTCCTGHN	0.414941	0.276627	0.414941	0.276627	8	12	8	12	0.666667	1.000000	0.666667	R	-4	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_25.AGATAASR	homer_8.NRYTTCCGGH	0.383855	0.244271	0.335873	0.268698	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_25.AGATAASR	homer_9.MACAGGAAGT	0.305526	0.194426	0.267335	0.213868	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_25.AGATAASR	homer_10.ACTTCCKGKT	0.674860	0.192817	0.337430	0.269944	8	10	4	14	0.285714	0.500000	0.400000	R	4	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_25.AGATAASR	homer_11.ACVAGGAAGT	0.464315	0.232157	0.348236	0.278589	8	10	6	12	0.500000	0.750000	0.600000	D	2	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_25.AGATAASR	homer_12.YCTTATCTBN	0.960197	0.768158	0.960197	0.768158	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_25.AGATAASR	homer_13.NBWGATAAGR	0.973273	0.778618	0.973273	0.778618	8	10	8	10	0.800000	1.000000	0.800000	D	-2	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_25.AGATAASR	homer_14.TGGCAGTTGG	0.471712	0.235856	0.353784	0.283027	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_25.AGATAASR	homer_15.AVCCGGAAGT	0.543018	0.108604	0.203632	0.162906	8	10	3	15	0.200000	0.375000	0.300000	D	-7	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_25.AGATAASR	homer_16.ANCAGGAAGT	0.455430	0.227715	0.341573	0.273258	8	10	6	12	0.500000	0.750000	0.600000	D	2	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_25.AGATAASR	homer_17.SAGATAAGRV	0.951306	0.761045	0.951306	0.761045	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_25.AGATAASR	homer_18.TGCTGAGTCA	0.385058	0.308047	0.385058	0.308047	8	10	8	10	0.800000	1.000000	0.800000	D	0	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_25.AGATAASR	homer_19.GCTATTTTTAGC	0.591539	0.318521	0.517597	0.345064	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_25.AGATAASR	homer_20.GGCVGTTR	0.703102	0.319592	0.439439	0.439439	8	8	5	11	0.454545	0.625000	0.625000	R	3	29
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_25.AGATAASR	homer_21.CYTGGCABNSTGCCAR	0.259457	0.106835	0.227025	0.113512	8	16	7	17	0.411765	0.875000	0.437500	R	-9	45
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_25.AGATAASR	homer_22.BBCTTATCTS	0.960490	0.768392	0.960490	0.768392	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_25.AGATAASR	homer_23.VACAGGAAAT	0.362035	0.230386	0.316780	0.253424	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_25.AGATAASR	homer_24.RGKGGGCGKGGC	0.185442	0.046360	0.092721	0.061814	8	12	4	16	0.250000	0.500000	0.333333	D	-8	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_25.AGATAASR	homer_25.AGATAASR	1.000000	1.000000	1.000000	1.000000	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_25.AGATAASR	homer_26.YGGCCCCGCCCC	0.145370	0.062302	0.109028	0.072685	8	12	6	14	0.428571	0.750000	0.500000	R	-6	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_25.AGATAASR	homer_27.AVCAGGAAGT	0.277012	0.176280	0.242385	0.193908	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_25.AGATAASR	homer_28.RGKGGGCGGAGC	0.503217	0.088803	0.188707	0.125804	8	12	3	17	0.176471	0.375000	0.250000	D	-9	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_25.AGATAASR	homer_29.AWWWTGCTGAGTCAT	0.352063	0.187767	0.352063	0.187767	8	15	8	15	0.533333	1.000000	0.533333	D	-4	43
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_25.AGATAASR	homer_30.CAAAGGTCAG	0.476201	0.303037	0.416676	0.333340	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_25.AGATAASR	homer_31.VTGACTCATC	0.407854	0.259544	0.356873	0.285498	8	10	7	11	0.636364	0.875000	0.700000	R	1	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_25.AGATAASR	homer_32.AAAGRGGAAGTG	0.429002	0.183858	0.321752	0.214501	8	12	6	14	0.428571	0.750000	0.500000	D	2	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_25.AGATAASR	homer_33.GRAASTGAAAST	0.502728	0.270700	0.439887	0.293258	8	12	7	13	0.538462	0.875000	0.583333	D	-5	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_25.AGATAASR	homer_34.CCCCTCCCCCAC	0.175401	0.094447	0.153476	0.102317	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_25.AGATAASR	homer_35.GAAAGTGAAAGT	0.460950	0.248204	0.403331	0.268887	8	12	7	13	0.538462	0.875000	0.583333	D	-5	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_25.AGATAASR	homer_36.DATGASTCATHN	0.369381	0.246254	0.369381	0.246254	8	12	8	12	0.666667	1.000000	0.666667	R	0	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_25.AGATAASR	homer_37.NDATGASTCAYN	0.348636	0.232424	0.348636	0.232424	8	12	8	12	0.666667	1.000000	0.666667	D	0	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_25.AGATAASR	homer_38.RATGASTCAT	0.421594	0.268287	0.368895	0.295116	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_25.AGATAASR	homer_39.DATGASTCAT	0.390503	0.248502	0.341690	0.273352	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_25.AGATAASR	homer_40.AGTTTCAKTTTC	0.407904	0.219641	0.356916	0.237944	8	12	7	13	0.538462	0.875000	0.583333	R	1	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_25.AGATAASR	homer_41.NNATGASTCATH	0.377249	0.251499	0.377249	0.251499	8	12	8	12	0.666667	1.000000	0.666667	D	0	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_25.AGATAASR	homer_42.SAAACCACAG	0.308303	0.246642	0.308303	0.246642	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_25.AGATAASR	homer_43.GAAASYGAAASY	0.449003	0.241771	0.392877	0.261918	8	12	7	13	0.538462	0.875000	0.583333	D	1	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_25.AGATAASR	homer_44.AVCAGCTG	0.279914	0.217711	0.244925	0.244925	8	8	7	9	0.777778	0.875000	0.875000	R	-1	29
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_25.AGATAASR	homer_45.SGTCACGTGR	0.314579	0.200186	0.275256	0.220205	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_25.AGATAASR	homer_46.NATGASTCABNN	0.361278	0.240852	0.361278	0.240852	8	12	8	12	0.666667	1.000000	0.666667	R	0	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_25.AGATAASR	homer_47.GATGASTCATCN	0.370407	0.246938	0.370407	0.246938	8	12	8	12	0.666667	1.000000	0.666667	R	0	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_25.AGATAASR	homer_48.AGTTTCASTTTC	0.451977	0.243372	0.395480	0.263654	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_25.AGATAASR	homer_49.RCAGGATGTGGT	0.304105	0.202737	0.304105	0.202737	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_25.AGATAASR	homer_50.GGGGGAATCCCC	0.250592	0.167062	0.250592	0.167062	8	12	8	12	0.666667	1.000000	0.666667	R	-2	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_25.AGATAASR	homer_51.GCTGTGGTTW	0.294912	0.235930	0.294912	0.235930	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_25.AGATAASR	homer_52.GGATGACTCATC	0.419725	0.279817	0.419725	0.279817	8	12	8	12	0.666667	1.000000	0.666667	D	0	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_25.AGATAASR	homer_53.NWAACCACADNN	0.280239	0.186826	0.280239	0.186826	8	12	8	12	0.666667	1.000000	0.666667	D	-1	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_25.AGATAASR	homer_54.ACCATCTGTT	0.557830	0.354982	0.488101	0.390481	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_25.AGATAASR	homer_55.SVYTTCCNGGAARB	0.281284	0.160733	0.281284	0.160733	8	14	8	14	0.571429	1.000000	0.571429	R	-6	41
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_25.AGATAASR	homer_56.SCCTAGCAACAG	0.325364	0.216909	0.325364	0.216909	8	12	8	12	0.666667	1.000000	0.666667	R	-4	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_25.AGATAASR	homer_57.AAACCACARM	0.249184	0.199347	0.249184	0.199347	8	10	8	10	0.800000	1.000000	0.800000	D	0	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_25.AGATAASR	homer_58.RTTATGYAAB	0.648813	0.412881	0.567712	0.454169	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_25.AGATAASR	homer_59.NYTTCCWGGAAR	0.303839	0.163606	0.265859	0.177240	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_25.AGATAASR	homer_60.ASWTCCTGBT	0.407305	0.203653	0.305479	0.244383	8	10	6	12	0.500000	0.750000	0.600000	R	-4	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_25.AGATAASR	homer_61.DGGGYGKGGC	0.090863	0.072691	0.090863	0.072691	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_25.AGATAASR	homer_62.TWGTCTGV	0.535331	0.321199	0.401498	0.401498	8	8	6	10	0.600000	0.750000	0.750000	R	-2	29
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_25.AGATAASR	homer_63.CTGGCAGSCTGCCA	0.179795	0.102740	0.179795	0.102740	8	14	8	14	0.571429	1.000000	0.571429	D	-1	41
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_25.AGATAASR	homer_64.VGGGRATTYCCC	0.175740	0.117160	0.175740	0.117160	8	12	8	12	0.666667	1.000000	0.666667	R	0	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_25.AGATAASR	homer_65.CARRGKBCAAAGTYCA	0.366601	0.183301	0.366601	0.183301	8	16	8	16	0.500000	1.000000	0.500000	D	-3	45
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_25.AGATAASR	homer_66.CCATTGTTNY	0.458497	0.366797	0.458497	0.366797	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_25.AGATAASR	homer_67.CYAAAAATAG	0.547546	0.273773	0.410660	0.328528	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_25.AGATAASR	homer_68.GGGGGGGG	0.111691	0.086871	0.097729	0.097729	8	8	7	9	0.777778	0.875000	0.875000	D	1	29
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_25.AGATAASR	homer_69.TTGAMCTTTG	0.469439	0.298734	0.410759	0.328608	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_25.AGATAASR	homer_70.MGGAAGTGAAAC	0.362731	0.241820	0.362731	0.241820	8	12	8	12	0.666667	1.000000	0.666667	D	-4	37
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_25.AGATAASR	homer_71.HACTTCCGGY	0.295470	0.188027	0.258537	0.206829	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_25.AGATAASR	homer_72.NRYTTCCGGY	0.366695	0.233351	0.320858	0.256686	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_25.AGATAASR	homer_73.AWWNTGCTGAGTCAT	0.352410	0.187952	0.352410	0.187952	8	15	8	15	0.533333	1.000000	0.533333	D	-4	43
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_25.AGATAASR	homer_74.AGGCCTAG	0.896870	0.128124	0.224217	0.224217	8	8	2	14	0.142857	0.250000	0.250000	D	-6	29
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_25.AGATAASR	homer_75.VTTACGTAAYNNNNN	0.530979	0.283189	0.530979	0.283189	8	15	8	15	0.533333	1.000000	0.533333	D	-3	43
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_25.AGATAASR	homer_76.TGCTGACTCA	0.379732	0.303785	0.379732	0.303785	8	10	8	10	0.800000	1.000000	0.800000	D	0	33
hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_25.AGATAASR	homer_77.ATTGCGCAAC	0.467093	0.233546	0.350320	0.280256	8	10	6	12	0.500000	0.750000	0.600000	D	2	33
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_26.YGGCCCCGCCCC	homer_1.ATTTCCTGTN	0.239497	0.199581	0.199581	0.239497	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_26.YGGCCCCGCCCC	homer_2.ACCGGAAGTG	0.360557	0.300464	0.300464	0.360557	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_26.YGGCCCCGCCCC	homer_3.AACCGGAAGT	0.302768	0.252306	0.252306	0.302768	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_26.YGGCCCCGCCCC	homer_4.ACAGGAAGTG	0.261408	0.217840	0.217840	0.261408	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_26.YGGCCCCGCCCC	homer_5.RACCGGAAGT	0.311484	0.259570	0.259570	0.311484	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_26.YGGCCCCGCCCC	homer_6.AGAGGAAGTG	0.365282	0.252888	0.273962	0.328754	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_26.YGGCCCCGCCCC	homer_7.NNAYTTCCTGHN	0.332256	0.281140	0.304568	0.304568	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_26.YGGCCCCGCCCC	homer_8.NRYTTCCGGH	0.421589	0.351324	0.351324	0.421589	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_26.YGGCCCCGCCCC	homer_9.MACAGGAAGT	0.177591	0.147992	0.147992	0.177591	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_26.YGGCCCCGCCCC	homer_10.ACTTCCKGKT	0.281478	0.234565	0.234565	0.281478	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_26.YGGCCCCGCCCC	homer_11.ACVAGGAAGT	0.208460	0.173717	0.173717	0.208460	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_26.YGGCCCCGCCCC	homer_12.YCTTATCTBN	0.614997	0.061500	0.102499	0.122999	12	10	2	20	0.100000	0.166667	0.200000	D	10	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_26.YGGCCCCGCCCC	homer_13.NBWGATAAGR	0.309216	0.068715	0.103072	0.123687	12	10	4	18	0.222222	0.333333	0.400000	R	-6	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_26.YGGCCCCGCCCC	homer_14.TGGCAGTTGG	0.590311	0.221367	0.295156	0.354187	12	10	6	16	0.375000	0.500000	0.600000	R	-4	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_26.YGGCCCCGCCCC	homer_15.AVCCGGAAGT	0.339363	0.282802	0.282802	0.339363	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_26.YGGCCCCGCCCC	homer_16.ANCAGGAAGT	0.192952	0.160793	0.160793	0.192952	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_26.YGGCCCCGCCCC	homer_17.SAGATAAGRV	0.499943	0.078938	0.124986	0.149983	12	10	3	19	0.157895	0.250000	0.300000	R	9	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_26.YGGCCCCGCCCC	homer_18.TGCTGAGTCA	0.280181	0.233484	0.233484	0.280181	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_26.YGGCCCCGCCCC	homer_19.GCTATTTTTAGC	0.634994	0.126999	0.211665	0.211665	12	12	4	20	0.200000	0.333333	0.333333	D	-8	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_26.YGGCCCCGCCCC	homer_20.GGCVGTTR	0.406945	0.271297	0.271297	0.406945	12	8	8	12	0.666667	0.666667	1.000000	R	2	37
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_26.YGGCCCCGCCCC	homer_21.CYTGGCABNSTGCCAR	0.329748	0.247311	0.329748	0.247311	12	16	12	16	0.750000	1.000000	0.750000	D	-2	53
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_26.YGGCCCCGCCCC	homer_22.BBCTTATCTS	0.472892	0.074667	0.118223	0.141868	12	10	3	19	0.157895	0.250000	0.300000	D	9	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_26.YGGCCCCGCCCC	homer_23.VACAGGAAAT	0.240815	0.200679	0.200679	0.240815	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_26.YGGCCCCGCCCC	homer_24.RGKGGGCGKGGC	0.939364	0.670975	0.782804	0.782804	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_26.YGGCCCCGCCCC	homer_25.AGATAASR	0.145370	0.062302	0.072685	0.109028	12	8	6	14	0.428571	0.500000	0.750000	R	-2	37
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_26.YGGCCCCGCCCC	homer_26.YGGCCCCGCCCC	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_26.YGGCCCCGCCCC	homer_27.AVCAGGAAGT	0.266550	0.222125	0.222125	0.266550	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_26.YGGCCCCGCCCC	homer_28.RGKGGGCGGAGC	0.919242	0.656601	0.766035	0.766035	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_26.YGGCCCCGCCCC	homer_29.AWWWTGCTGAGTCAT	0.223862	0.179090	0.223862	0.179090	12	15	12	15	0.800000	1.000000	0.800000	R	-1	51
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_26.YGGCCCCGCCCC	homer_30.CAAAGGTCAG	0.423625	0.197692	0.247115	0.296538	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_26.YGGCCCCGCCCC	homer_31.VTGACTCATC	0.221570	0.184642	0.184642	0.221570	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_26.YGGCCCCGCCCC	homer_32.AAAGRGGAAGTG	0.280929	0.280929	0.280929	0.280929	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_26.YGGCCCCGCCCC	homer_33.GRAASTGAAAST	0.187197	0.158398	0.171598	0.171598	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_26.YGGCCCCGCCCC	homer_34.CCCCTCCCCCAC	0.829666	0.497800	0.622250	0.622250	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_26.YGGCCCCGCCCC	homer_35.GAAAGTGAAAGT	0.193688	0.079754	0.112985	0.112985	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_26.YGGCCCCGCCCC	homer_36.DATGASTCATHN	0.181487	0.153566	0.166363	0.166363	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_26.YGGCCCCGCCCC	homer_37.NDATGASTCAYN	0.128057	0.108356	0.117386	0.117386	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_26.YGGCCCCGCCCC	homer_38.RATGASTCAT	0.180652	0.150543	0.150543	0.180652	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_26.YGGCCCCGCCCC	homer_39.DATGASTCAT	0.155927	0.129939	0.129939	0.155927	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_26.YGGCCCCGCCCC	homer_40.AGTTTCAKTTTC	0.285431	0.117530	0.166501	0.166501	12	12	7	17	0.411765	0.583333	0.583333	D	-5	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_26.YGGCCCCGCCCC	homer_41.NNATGASTCATH	0.117212	0.099179	0.107444	0.107444	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_26.YGGCCCCGCCCC	homer_42.SAAACCACAG	0.242274	0.201895	0.201895	0.242274	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_26.YGGCCCCGCCCC	homer_43.GAAASYGAAASY	0.113093	0.095694	0.103669	0.103669	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_26.YGGCCCCGCCCC	homer_44.AVCAGCTG	0.500569	0.166856	0.208571	0.312856	12	8	5	15	0.333333	0.416667	0.625000	R	-3	37
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_26.YGGCCCCGCCCC	homer_45.SGTCACGTGR	0.281907	0.234922	0.234922	0.281907	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_26.YGGCCCCGCCCC	homer_46.NATGASTCABNN	0.174774	0.147886	0.160209	0.160209	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_26.YGGCCCCGCCCC	homer_47.GATGASTCATCN	0.212662	0.179945	0.194940	0.194940	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_26.YGGCCCCGCCCC	homer_48.AGTTTCASTTTC	0.237533	0.097808	0.138561	0.138561	12	12	7	17	0.411765	0.583333	0.583333	D	-5	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_26.YGGCCCCGCCCC	homer_49.RCAGGATGTGGT	0.419103	0.299359	0.349253	0.349253	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_26.YGGCCCCGCCCC	homer_50.GGGGGAATCCCC	0.452288	0.382705	0.414597	0.414597	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_26.YGGCCCCGCCCC	homer_51.GCTGTGGTTW	0.282643	0.235536	0.235536	0.282643	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_26.YGGCCCCGCCCC	homer_52.GGATGACTCATC	0.201382	0.170400	0.184600	0.184600	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_26.YGGCCCCGCCCC	homer_53.NWAACCACADNN	0.304618	0.257753	0.279233	0.279233	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_26.YGGCCCCGCCCC	homer_54.ACCATCTGTT	0.468842	0.137895	0.195351	0.234421	12	10	5	17	0.294118	0.416667	0.500000	D	-5	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_26.YGGCCCCGCCCC	homer_55.SVYTTCCNGGAARB	0.251010	0.111560	0.167340	0.143434	12	14	8	18	0.444444	0.666667	0.571429	D	4	49
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_26.YGGCCCCGCCCC	homer_56.SCCTAGCAACAG	0.291784	0.175070	0.218838	0.218838	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_26.YGGCCCCGCCCC	homer_57.AAACCACARM	0.280981	0.234151	0.234151	0.280981	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_26.YGGCCCCGCCCC	homer_58.RTTATGYAAB	0.943849	0.044945	0.078654	0.094385	12	10	1	21	0.047619	0.083333	0.100000	R	-9	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_26.YGGCCCCGCCCC	homer_59.NYTTCCWGGAAR	0.236590	0.097420	0.138011	0.138011	12	12	7	17	0.411765	0.583333	0.583333	D	5	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_26.YGGCCCCGCCCC	homer_60.ASWTCCTGBT	0.266991	0.222493	0.222493	0.266991	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_26.YGGCCCCGCCCC	homer_61.DGGGYGKGGC	0.894940	0.745783	0.745783	0.894940	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_26.YGGCCCCGCCCC	homer_62.TWGTCTGV	0.369292	0.246194	0.246194	0.369292	12	8	8	12	0.666667	0.666667	1.000000	R	4	37
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_26.YGGCCCCGCCCC	homer_63.CTGGCAGSCTGCCA	0.304912	0.223602	0.279502	0.239573	12	14	11	15	0.733333	0.916667	0.785714	D	-3	49
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_26.YGGCCCCGCCCC	homer_64.VGGGRATTYCCC	0.393012	0.393012	0.393012	0.393012	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_26.YGGCCCCGCCCC	homer_65.CARRGKBCAAAGTYCA	0.197019	0.147764	0.197019	0.147764	12	16	12	16	0.750000	1.000000	0.750000	R	-1	53
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_26.YGGCCCCGCCCC	homer_66.CCATTGTTNY	0.242277	0.113062	0.141328	0.169594	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_26.YGGCCCCGCCCC	homer_67.CYAAAAATAG	0.835045	0.131849	0.208761	0.250514	12	10	3	19	0.157895	0.250000	0.300000	R	-7	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_26.YGGCCCCGCCCC	homer_68.GGGGGGGG	0.844331	0.562887	0.562887	0.844331	12	8	8	12	0.666667	0.666667	1.000000	R	3	37
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_26.YGGCCCCGCCCC	homer_69.TTGAMCTTTG	0.226993	0.189161	0.189161	0.226993	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_26.YGGCCCCGCCCC	homer_70.MGGAAGTGAAAC	0.248461	0.248461	0.248461	0.248461	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_26.YGGCCCCGCCCC	homer_71.HACTTCCGGY	0.414810	0.345675	0.345675	0.414810	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_26.YGGCCCCGCCCC	homer_72.NRYTTCCGGY	0.410990	0.342492	0.342492	0.410990	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_26.YGGCCCCGCCCC	homer_73.AWWNTGCTGAGTCAT	0.270712	0.216570	0.270712	0.216570	12	15	12	15	0.800000	1.000000	0.800000	R	-1	51
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_26.YGGCCCCGCCCC	homer_74.AGGCCTAG	0.527702	0.351802	0.351802	0.527702	12	8	8	12	0.666667	0.666667	1.000000	D	0	37
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_26.YGGCCCCGCCCC	homer_75.VTTACGTAAYNNNNN	0.052945	0.042356	0.052945	0.042356	12	15	12	15	0.800000	1.000000	0.800000	D	-1	51
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_26.YGGCCCCGCCCC	homer_76.TGCTGACTCA	0.299877	0.249898	0.249898	0.299877	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_26.YGGCCCCGCCCC	homer_77.ATTGCGCAAC	0.242263	0.167720	0.181697	0.218036	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_27.AVCAGGAAGT	homer_1.ATTTCCTGTN	0.847281	0.847281	0.847281	0.847281	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_27.AVCAGGAAGT	homer_2.ACCGGAAGTG	0.910155	0.744673	0.819140	0.819140	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_27.AVCAGGAAGT	homer_3.AACCGGAAGT	0.886194	0.886194	0.886194	0.886194	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_27.AVCAGGAAGT	homer_4.ACAGGAAGTG	0.945965	0.773972	0.851369	0.851369	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_27.AVCAGGAAGT	homer_5.RACCGGAAGT	0.915243	0.915243	0.915243	0.915243	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_27.AVCAGGAAGT	homer_6.AGAGGAAGTG	0.887843	0.726417	0.799059	0.799059	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_27.AVCAGGAAGT	homer_7.NNAYTTCCTGHN	0.933184	0.777653	0.933184	0.777653	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_27.AVCAGGAAGT	homer_8.NRYTTCCGGH	0.918295	0.751333	0.826466	0.826466	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_27.AVCAGGAAGT	homer_9.MACAGGAAGT	0.857722	0.857722	0.857722	0.857722	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_27.AVCAGGAAGT	homer_10.ACTTCCKGKT	0.977106	0.977106	0.977106	0.977106	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_27.AVCAGGAAGT	homer_11.ACVAGGAAGT	0.961928	0.961928	0.961928	0.961928	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_27.AVCAGGAAGT	homer_12.YCTTATCTBN	0.265452	0.217188	0.238907	0.238907	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_27.AVCAGGAAGT	homer_13.NBWGATAAGR	0.235678	0.192827	0.212110	0.212110	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_27.AVCAGGAAGT	homer_14.TGGCAGTTGG	0.483702	0.260455	0.338591	0.338591	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_27.AVCAGGAAGT	homer_15.AVCCGGAAGT	0.901504	0.901504	0.901504	0.901504	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_27.AVCAGGAAGT	homer_16.ANCAGGAAGT	0.975193	0.975193	0.975193	0.975193	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_27.AVCAGGAAGT	homer_17.SAGATAAGRV	0.468505	0.252272	0.327954	0.327954	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_27.AVCAGGAAGT	homer_18.TGCTGAGTCA	0.326388	0.175747	0.228472	0.228472	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_27.AVCAGGAAGT	homer_19.GCTATTTTTAGC	0.325474	0.225328	0.292927	0.244106	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_27.AVCAGGAAGT	homer_20.GGCVGTTR	0.498569	0.249284	0.299141	0.373927	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_27.AVCAGGAAGT	homer_21.CYTGGCABNSTGCCAR	0.457639	0.242279	0.411875	0.257422	10	16	9	17	0.529412	0.900000	0.562500	D	1	49
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_27.AVCAGGAAGT	homer_22.BBCTTATCTS	0.452082	0.243429	0.316457	0.316457	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_27.AVCAGGAAGT	homer_23.VACAGGAAAT	0.872310	0.872310	0.872310	0.872310	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_27.AVCAGGAAGT	homer_24.RGKGGGCGKGGC	0.367054	0.254114	0.330348	0.275290	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_27.AVCAGGAAGT	homer_25.AGATAASR	0.277012	0.176280	0.193908	0.242385	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_27.AVCAGGAAGT	homer_26.YGGCCCCGCCCC	0.266550	0.222125	0.266550	0.222125	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_27.AVCAGGAAGT	homer_27.AVCAGGAAGT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_27.AVCAGGAAGT	homer_28.RGKGGGCGGAGC	0.339860	0.235287	0.305874	0.254895	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_27.AVCAGGAAGT	homer_29.AWWWTGCTGAGTCAT	0.319418	0.212946	0.319418	0.212946	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_27.AVCAGGAAGT	homer_30.CAAAGGTCAG	0.216869	0.216869	0.216869	0.216869	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_27.AVCAGGAAGT	homer_31.VTGACTCATC	0.214907	0.175833	0.193417	0.193417	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_27.AVCAGGAAGT	homer_32.AAAGRGGAAGTG	0.880061	0.733384	0.880061	0.733384	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_27.AVCAGGAAGT	homer_33.GRAASTGAAAST	0.597241	0.497701	0.597241	0.497701	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_27.AVCAGGAAGT	homer_34.CCCCTCCCCCAC	0.367422	0.306185	0.367422	0.306185	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_27.AVCAGGAAGT	homer_35.GAAAGTGAAAGT	0.578217	0.481848	0.578217	0.481848	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_27.AVCAGGAAGT	homer_36.DATGASTCATHN	0.188750	0.157292	0.188750	0.157292	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_27.AVCAGGAAGT	homer_37.NDATGASTCAYN	0.210778	0.175648	0.210778	0.175648	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_27.AVCAGGAAGT	homer_38.RATGASTCAT	0.213949	0.213949	0.213949	0.213949	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_27.AVCAGGAAGT	homer_39.DATGASTCAT	0.204108	0.204108	0.204108	0.204108	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_27.AVCAGGAAGT	homer_40.AGTTTCAKTTTC	0.557660	0.464717	0.557660	0.464717	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_27.AVCAGGAAGT	homer_41.NNATGASTCATH	0.212842	0.177368	0.212842	0.177368	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_27.AVCAGGAAGT	homer_42.SAAACCACAG	0.240791	0.160527	0.192633	0.192633	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_27.AVCAGGAAGT	homer_43.GAAASYGAAASY	0.589817	0.491514	0.589817	0.491514	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_27.AVCAGGAAGT	homer_44.AVCAGCTG	0.415395	0.264342	0.290776	0.363470	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_27.AVCAGGAAGT	homer_45.SGTCACGTGR	0.400828	0.171783	0.240497	0.240497	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_27.AVCAGGAAGT	homer_46.NATGASTCABNN	0.226424	0.188687	0.226424	0.188687	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_27.AVCAGGAAGT	homer_47.GATGASTCATCN	0.177664	0.148053	0.177664	0.148053	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_27.AVCAGGAAGT	homer_48.AGTTTCASTTTC	0.549976	0.458313	0.549976	0.458313	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_27.AVCAGGAAGT	homer_49.RCAGGATGTGGT	0.846194	0.585827	0.761575	0.634645	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_27.AVCAGGAAGT	homer_50.GGGGGAATCCCC	0.501768	0.347378	0.451591	0.376326	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_27.AVCAGGAAGT	homer_51.GCTGTGGTTW	0.170265	0.139308	0.153238	0.153238	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_27.AVCAGGAAGT	homer_52.GGATGACTCATC	0.202591	0.168826	0.202591	0.168826	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_27.AVCAGGAAGT	homer_53.NWAACCACADNN	0.181984	0.151653	0.181984	0.151653	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_27.AVCAGGAAGT	homer_54.ACCATCTGTT	0.288870	0.236348	0.259983	0.259983	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_27.AVCAGGAAGT	homer_55.SVYTTCCNGGAARB	0.739777	0.528412	0.739777	0.528412	10	14	10	14	0.714286	1.000000	0.714286	R	-3	45
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_27.AVCAGGAAGT	homer_56.SCCTAGCAACAG	0.343533	0.286277	0.343533	0.286277	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_27.AVCAGGAAGT	homer_57.AAACCACARM	0.236261	0.193304	0.212634	0.212634	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_27.AVCAGGAAGT	homer_58.RTTATGYAAB	0.334138	0.273386	0.300724	0.300724	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_27.AVCAGGAAGT	homer_59.NYTTCCWGGAAR	0.732840	0.610700	0.732840	0.610700	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_27.AVCAGGAAGT	homer_60.ASWTCCTGBT	0.853699	0.853699	0.853699	0.853699	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_27.AVCAGGAAGT	homer_61.DGGGYGKGGC	0.432743	0.233015	0.302920	0.302920	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_27.AVCAGGAAGT	homer_62.TWGTCTGV	0.267783	0.214227	0.214227	0.267783	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_27.AVCAGGAAGT	homer_63.CTGGCAGSCTGCCA	0.500870	0.250435	0.400696	0.286211	10	14	8	16	0.500000	0.800000	0.571429	D	2	45
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_27.AVCAGGAAGT	homer_64.VGGGRATTYCCC	0.551365	0.315066	0.441092	0.367577	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_27.AVCAGGAAGT	homer_65.CARRGKBCAAAGTYCA	0.317127	0.198204	0.317127	0.198204	10	16	10	16	0.625000	1.000000	0.625000	D	-3	49
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_27.AVCAGGAAGT	homer_66.CCATTGTTNY	0.287919	0.235570	0.259127	0.259127	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_27.AVCAGGAAGT	homer_67.CYAAAAATAG	0.419805	0.279870	0.335844	0.335844	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_27.AVCAGGAAGT	homer_68.GGGGGGGG	0.503218	0.251609	0.301931	0.377413	10	8	6	12	0.500000	0.600000	0.750000	D	-2	33
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_27.AVCAGGAAGT	homer_69.TTGAMCTTTG	0.208476	0.208476	0.208476	0.208476	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_27.AVCAGGAAGT	homer_70.MGGAAGTGAAAC	0.948500	0.442633	0.663950	0.553291	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_27.AVCAGGAAGT	homer_71.HACTTCCGGY	0.910079	0.744610	0.819071	0.819071	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_27.AVCAGGAAGT	homer_72.NRYTTCCGGY	0.877217	0.717723	0.789496	0.789496	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_27.AVCAGGAAGT	homer_73.AWWNTGCTGAGTCAT	0.323329	0.215553	0.323329	0.215553	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_27.AVCAGGAAGT	homer_74.AGGCCTAG	0.309285	0.247428	0.247428	0.309285	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_27.AVCAGGAAGT	homer_75.VTTACGTAAYNNNNN	0.305458	0.203639	0.305458	0.203639	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_27.AVCAGGAAGT	homer_76.TGCTGACTCA	0.299012	0.244646	0.269111	0.269111	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_27.AVCAGGAAGT	homer_77.ATTGCGCAAC	0.344024	0.281474	0.309622	0.309622	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_28.RGKGGGCGGAGC	homer_1.ATTTCCTGTN	0.260191	0.180133	0.195144	0.234172	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_28.RGKGGGCGGAGC	homer_2.ACCGGAAGTG	0.427178	0.244102	0.284785	0.341742	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_28.RGKGGGCGGAGC	homer_3.AACCGGAAGT	0.371452	0.257159	0.278589	0.334307	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_28.RGKGGGCGGAGC	homer_4.ACAGGAAGTG	0.300538	0.250449	0.250449	0.300538	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_28.RGKGGGCGGAGC	homer_5.RACCGGAAGT	0.376503	0.260656	0.282377	0.338853	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_28.RGKGGGCGGAGC	homer_6.AGAGGAAGTG	0.351702	0.293085	0.293085	0.351702	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_28.RGKGGGCGGAGC	homer_7.NNAYTTCCTGHN	0.422865	0.253719	0.317148	0.317148	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_28.RGKGGGCGGAGC	homer_8.NRYTTCCGGH	0.507483	0.289990	0.338322	0.405986	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_28.RGKGGGCGGAGC	homer_9.MACAGGAAGT	0.251032	0.173791	0.188274	0.225929	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_28.RGKGGGCGGAGC	homer_10.ACTTCCKGKT	0.348405	0.241203	0.261304	0.313564	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_28.RGKGGGCGGAGC	homer_11.ACVAGGAAGT	0.259828	0.216523	0.216523	0.259828	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_28.RGKGGGCGGAGC	homer_12.YCTTATCTBN	0.138695	0.115579	0.115579	0.138695	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_28.RGKGGGCGGAGC	homer_13.NBWGATAAGR	0.339977	0.099993	0.141657	0.169988	12	10	5	17	0.294118	0.416667	0.500000	D	7	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_28.RGKGGGCGGAGC	homer_14.TGGCAGTTGG	0.242104	0.201753	0.201753	0.242104	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_28.RGKGGGCGGAGC	homer_15.AVCCGGAAGT	0.397778	0.275385	0.298333	0.358000	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_28.RGKGGGCGGAGC	homer_16.ANCAGGAAGT	0.258706	0.215588	0.215588	0.258706	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_28.RGKGGGCGGAGC	homer_17.SAGATAAGRV	0.157590	0.109101	0.118193	0.141831	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_28.RGKGGGCGGAGC	homer_18.TGCTGAGTCA	0.430356	0.245918	0.286904	0.344285	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_28.RGKGGGCGGAGC	homer_19.GCTATTTTTAGC	0.944280	0.085844	0.157380	0.157380	12	12	2	22	0.090909	0.166667	0.166667	R	10	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_28.RGKGGGCGGAGC	homer_20.GGCVGTTR	0.399154	0.266103	0.266103	0.399154	12	8	8	12	0.666667	0.666667	1.000000	D	4	37
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_28.RGKGGGCGGAGC	homer_21.CYTGGCABNSTGCCAR	0.385355	0.249347	0.353242	0.264931	12	16	11	17	0.647059	0.916667	0.687500	D	1	53
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_28.RGKGGGCGGAGC	homer_22.BBCTTATCTS	0.155777	0.107846	0.116833	0.140199	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_28.RGKGGGCGGAGC	homer_23.VACAGGAAAT	0.237325	0.164302	0.177994	0.213592	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_28.RGKGGGCGGAGC	homer_24.RGKGGGCGKGGC	0.898689	0.898689	0.898689	0.898689	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_28.RGKGGGCGGAGC	homer_25.AGATAASR	0.503217	0.088803	0.125804	0.188707	12	8	3	17	0.176471	0.250000	0.375000	D	9	37
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_28.RGKGGGCGGAGC	homer_26.YGGCCCCGCCCC	0.919242	0.656601	0.766035	0.766035	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_28.RGKGGGCGGAGC	homer_27.AVCAGGAAGT	0.339860	0.235287	0.254895	0.305874	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_28.RGKGGGCGGAGC	homer_28.RGKGGGCGGAGC	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_28.RGKGGGCGGAGC	homer_29.AWWWTGCTGAGTCAT	0.346643	0.277315	0.346643	0.277315	12	15	12	15	0.800000	1.000000	0.800000	D	0	51
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_28.RGKGGGCGGAGC	homer_30.CAAAGGTCAG	0.383508	0.265505	0.287631	0.345157	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_28.RGKGGGCGGAGC	homer_31.VTGACTCATC	0.351021	0.163810	0.204762	0.245715	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_28.RGKGGGCGGAGC	homer_32.AAAGRGGAAGTG	0.314843	0.266406	0.288606	0.288606	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_28.RGKGGGCGGAGC	homer_33.GRAASTGAAAST	0.223199	0.188861	0.204600	0.204600	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_28.RGKGGGCGGAGC	homer_34.CCCCTCCCCCAC	0.738508	0.624891	0.676966	0.676966	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_28.RGKGGGCGGAGC	homer_35.GAAAGTGAAAGT	0.154515	0.130744	0.141639	0.141639	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_28.RGKGGGCGGAGC	homer_36.DATGASTCATHN	0.245626	0.122813	0.163751	0.163751	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_28.RGKGGGCGGAGC	homer_37.NDATGASTCAYN	0.220356	0.110178	0.146904	0.146904	12	12	8	16	0.500000	0.666667	0.666667	D	4	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_28.RGKGGGCGGAGC	homer_38.RATGASTCAT	0.270930	0.126434	0.158042	0.189651	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_28.RGKGGGCGGAGC	homer_39.DATGASTCAT	0.261260	0.121921	0.152402	0.182882	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_28.RGKGGGCGGAGC	homer_40.AGTTTCAKTTTC	0.153554	0.129930	0.140757	0.140757	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_28.RGKGGGCGGAGC	homer_41.NNATGASTCATH	0.203107	0.101553	0.135405	0.135405	12	12	8	16	0.500000	0.666667	0.666667	D	4	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_28.RGKGGGCGGAGC	homer_42.SAAACCACAG	0.399753	0.276752	0.299815	0.359778	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_28.RGKGGGCGGAGC	homer_43.GAAASYGAAASY	0.164944	0.139568	0.151199	0.151199	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_28.RGKGGGCGGAGC	homer_44.AVCAGCTG	0.294579	0.158620	0.171838	0.257757	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_28.RGKGGGCGGAGC	homer_45.SGTCACGTGR	0.415488	0.193894	0.242368	0.290841	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_28.RGKGGGCGGAGC	homer_46.NATGASTCABNN	0.247221	0.123611	0.164814	0.164814	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_28.RGKGGGCGGAGC	homer_47.GATGASTCATCN	0.286610	0.143305	0.191073	0.191073	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_28.RGKGGGCGGAGC	homer_48.AGTTTCASTTTC	0.182847	0.154717	0.167610	0.167610	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_28.RGKGGGCGGAGC	homer_49.RCAGGATGTGGT	0.365044	0.365044	0.365044	0.365044	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_28.RGKGGGCGGAGC	homer_50.GGGGGAATCCCC	0.525157	0.315094	0.393868	0.393868	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_28.RGKGGGCGGAGC	homer_51.GCTGTGGTTW	0.401874	0.229642	0.267916	0.321499	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_28.RGKGGGCGGAGC	homer_52.GGATGACTCATC	0.336357	0.138500	0.196208	0.196208	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_28.RGKGGGCGGAGC	homer_53.NWAACCACADNN	0.462204	0.277322	0.346653	0.346653	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_28.RGKGGGCGGAGC	homer_54.ACCATCTGTT	0.428748	0.200082	0.250103	0.300123	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_28.RGKGGGCGGAGC	homer_55.SVYTTCCNGGAARB	0.141683	0.121442	0.141683	0.121442	12	14	12	14	0.857143	1.000000	0.857143	D	-1	49
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_28.RGKGGGCGGAGC	homer_56.SCCTAGCAACAG	0.260616	0.220522	0.238898	0.238898	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_28.RGKGGGCGGAGC	homer_57.AAACCACARM	0.411206	0.234975	0.274137	0.328965	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_28.RGKGGGCGGAGC	homer_58.RTTATGYAAB	0.091116	0.042521	0.053151	0.063781	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_28.RGKGGGCGGAGC	homer_59.NYTTCCWGGAAR	0.107401	0.107401	0.107401	0.107401	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_28.RGKGGGCGGAGC	homer_60.ASWTCCTGBT	0.319469	0.221171	0.239602	0.287522	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_28.RGKGGGCGGAGC	homer_61.DGGGYGKGGC	0.827955	0.689963	0.689963	0.827955	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_28.RGKGGGCGGAGC	homer_62.TWGTCTGV	0.382054	0.254703	0.254703	0.382054	12	8	8	12	0.666667	0.666667	1.000000	D	2	37
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_28.RGKGGGCGGAGC	homer_63.CTGGCAGSCTGCCA	0.404817	0.214315	0.303613	0.260240	12	14	9	17	0.529412	0.750000	0.642857	R	3	49
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_28.RGKGGGCGGAGC	homer_64.VGGGRATTYCCC	0.346490	0.247493	0.288741	0.288741	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_28.RGKGGGCGGAGC	homer_65.CARRGKBCAAAGTYCA	0.370000	0.277500	0.370000	0.277500	12	16	12	16	0.750000	1.000000	0.750000	D	-1	53
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_28.RGKGGGCGGAGC	homer_66.CCATTGTTNY	0.229793	0.086172	0.114896	0.137876	12	10	6	16	0.375000	0.500000	0.600000	D	-4	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_28.RGKGGGCGGAGC	homer_67.CYAAAAATAG	0.452499	0.133088	0.188541	0.226249	12	10	5	17	0.294118	0.416667	0.500000	R	-5	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_28.RGKGGGCGGAGC	homer_68.GGGGGGGG	0.797121	0.531414	0.531414	0.797121	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_28.RGKGGGCGGAGC	homer_69.TTGAMCTTTG	0.245467	0.169939	0.184100	0.220920	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_28.RGKGGGCGGAGC	homer_70.MGGAAGTGAAAC	0.242412	0.242412	0.242412	0.242412	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_28.RGKGGGCGGAGC	homer_71.HACTTCCGGY	0.485232	0.277275	0.323488	0.388186	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_28.RGKGGGCGGAGC	homer_72.NRYTTCCGGY	0.483290	0.276166	0.322193	0.386632	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_28.RGKGGGCGGAGC	homer_73.AWWNTGCTGAGTCAT	0.380365	0.304292	0.380365	0.304292	12	15	12	15	0.800000	1.000000	0.800000	D	0	51
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_28.RGKGGGCGGAGC	homer_74.AGGCCTAG	0.473929	0.315952	0.315952	0.473929	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_28.RGKGGGCGGAGC	homer_75.VTTACGTAAYNNNNN	0.438937	0.076337	0.146312	0.117050	12	15	4	23	0.173913	0.333333	0.266667	R	8	51
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_28.RGKGGGCGGAGC	homer_76.TGCTGACTCA	0.410292	0.234452	0.273528	0.328233	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_28.RGKGGGCGGAGC	homer_77.ATTGCGCAAC	0.320410	0.149525	0.186906	0.224287	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_29.AWWWTGCTGAGTCAT	homer_1.ATTTCCTGTN	0.528735	0.352490	0.352490	0.528735	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_29.AWWWTGCTGAGTCAT	homer_2.ACCGGAAGTG	0.325088	0.216725	0.216725	0.325088	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_29.AWWWTGCTGAGTCAT	homer_3.AACCGGAAGT	0.278820	0.185880	0.185880	0.278820	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_29.AWWWTGCTGAGTCAT	homer_4.ACAGGAAGTG	0.380190	0.253460	0.253460	0.380190	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_29.AWWWTGCTGAGTCAT	homer_5.RACCGGAAGT	0.314190	0.209460	0.209460	0.314190	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_29.AWWWTGCTGAGTCAT	homer_6.AGAGGAAGTG	0.326123	0.217416	0.217416	0.326123	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_29.AWWWTGCTGAGTCAT	homer_7.NNAYTTCCTGHN	0.419634	0.288498	0.307731	0.384664	15	12	11	16	0.687500	0.733333	0.916667	D	-1	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_29.AWWWTGCTGAGTCAT	homer_8.NRYTTCCGGH	0.350560	0.233707	0.233707	0.350560	15	10	10	15	0.666667	0.666667	1.000000	D	0	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_29.AWWWTGCTGAGTCAT	homer_9.MACAGGAAGT	0.455612	0.303741	0.303741	0.455612	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_29.AWWWTGCTGAGTCAT	homer_10.ACTTCCKGKT	0.316125	0.210750	0.210750	0.316125	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_29.AWWWTGCTGAGTCAT	homer_11.ACVAGGAAGT	0.342188	0.228125	0.228125	0.342188	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_29.AWWWTGCTGAGTCAT	homer_12.YCTTATCTBN	0.420444	0.280296	0.280296	0.420444	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_29.AWWWTGCTGAGTCAT	homer_13.NBWGATAAGR	0.428575	0.285717	0.285717	0.428575	15	10	10	15	0.666667	0.666667	1.000000	D	2	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_29.AWWWTGCTGAGTCAT	homer_14.TGGCAGTTGG	0.422464	0.237636	0.253478	0.380218	15	10	9	16	0.562500	0.600000	0.900000	R	-1	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_29.AWWWTGCTGAGTCAT	homer_15.AVCCGGAAGT	0.300433	0.200289	0.200289	0.300433	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_29.AWWWTGCTGAGTCAT	homer_16.ANCAGGAAGT	0.356357	0.237571	0.237571	0.356357	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_29.AWWWTGCTGAGTCAT	homer_17.SAGATAAGRV	0.389129	0.259419	0.259419	0.389129	15	10	10	15	0.666667	0.666667	1.000000	D	3	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_29.AWWWTGCTGAGTCAT	homer_18.TGCTGAGTCA	0.968722	0.645815	0.645815	0.968722	15	10	10	15	0.666667	0.666667	1.000000	D	4	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_29.AWWWTGCTGAGTCAT	homer_19.GCTATTTTTAGC	0.480922	0.168323	0.224430	0.280538	15	12	7	20	0.350000	0.466667	0.583333	R	-5	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_29.AWWWTGCTGAGTCAT	homer_20.GGCVGTTR	0.414273	0.220946	0.220946	0.414273	15	8	8	15	0.533333	0.533333	1.000000	R	0	43
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_29.AWWWTGCTGAGTCAT	homer_21.CYTGGCABNSTGCCAR	0.427198	0.234959	0.313279	0.293699	15	16	11	20	0.550000	0.733333	0.687500	R	-5	59
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_29.AWWWTGCTGAGTCAT	homer_22.BBCTTATCTS	0.374275	0.249516	0.249516	0.374275	15	10	10	15	0.666667	0.666667	1.000000	R	3	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_29.AWWWTGCTGAGTCAT	homer_23.VACAGGAAAT	0.489339	0.326226	0.326226	0.489339	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_29.AWWWTGCTGAGTCAT	homer_24.RGKGGGCGKGGC	0.202038	0.161631	0.161631	0.202038	15	12	12	15	0.800000	0.800000	1.000000	D	1	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_29.AWWWTGCTGAGTCAT	homer_25.AGATAASR	0.352063	0.187767	0.187767	0.352063	15	8	8	15	0.533333	0.533333	1.000000	D	4	43
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_29.AWWWTGCTGAGTCAT	homer_26.YGGCCCCGCCCC	0.223862	0.179090	0.179090	0.223862	15	12	12	15	0.800000	0.800000	1.000000	R	2	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_29.AWWWTGCTGAGTCAT	homer_27.AVCAGGAAGT	0.319418	0.212946	0.212946	0.319418	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_29.AWWWTGCTGAGTCAT	homer_28.RGKGGGCGGAGC	0.346643	0.277315	0.277315	0.346643	15	12	12	15	0.800000	0.800000	1.000000	D	0	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_29.AWWWTGCTGAGTCAT	homer_29.AWWWTGCTGAGTCAT	1.000000	1.000000	1.000000	1.000000	15	15	15	15	1.000000	1.000000	1.000000	D	0	57
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_29.AWWWTGCTGAGTCAT	homer_30.CAAAGGTCAG	0.330399	0.220266	0.220266	0.330399	15	10	10	15	0.666667	0.666667	1.000000	D	5	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_29.AWWWTGCTGAGTCAT	homer_31.VTGACTCATC	0.896782	0.597855	0.597855	0.896782	15	10	10	15	0.666667	0.666667	1.000000	R	5	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_29.AWWWTGCTGAGTCAT	homer_32.AAAGRGGAAGTG	0.222242	0.177794	0.177794	0.222242	15	12	12	15	0.800000	0.800000	1.000000	R	0	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_29.AWWWTGCTGAGTCAT	homer_33.GRAASTGAAAST	0.235462	0.188370	0.188370	0.235462	15	12	12	15	0.800000	0.800000	1.000000	R	1	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_29.AWWWTGCTGAGTCAT	homer_34.CCCCTCCCCCAC	0.157161	0.125729	0.125729	0.157161	15	12	12	15	0.800000	0.800000	1.000000	D	3	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_29.AWWWTGCTGAGTCAT	homer_35.GAAAGTGAAAGT	0.318523	0.254819	0.254819	0.318523	15	12	12	15	0.800000	0.800000	1.000000	R	1	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_29.AWWWTGCTGAGTCAT	homer_36.DATGASTCATHN	0.822384	0.565389	0.603081	0.753852	15	12	11	16	0.687500	0.733333	0.916667	R	4	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_29.AWWWTGCTGAGTCAT	homer_37.NDATGASTCAYN	0.824326	0.566724	0.604506	0.755632	15	12	11	16	0.687500	0.733333	0.916667	D	4	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_29.AWWWTGCTGAGTCAT	homer_38.RATGASTCAT	0.860164	0.573443	0.573443	0.860164	15	10	10	15	0.666667	0.666667	1.000000	D	5	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_29.AWWWTGCTGAGTCAT	homer_39.DATGASTCAT	0.854353	0.569569	0.569569	0.854353	15	10	10	15	0.666667	0.666667	1.000000	D	5	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_29.AWWWTGCTGAGTCAT	homer_40.AGTTTCAKTTTC	0.260578	0.208463	0.208463	0.260578	15	12	12	15	0.800000	0.800000	1.000000	D	1	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_29.AWWWTGCTGAGTCAT	homer_41.NNATGASTCATH	0.815172	0.560431	0.597793	0.747241	15	12	11	16	0.687500	0.733333	0.916667	D	4	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_29.AWWWTGCTGAGTCAT	homer_42.SAAACCACAG	0.375762	0.250508	0.250508	0.375762	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_29.AWWWTGCTGAGTCAT	homer_43.GAAASYGAAASY	0.241748	0.193398	0.193398	0.241748	15	12	12	15	0.800000	0.800000	1.000000	R	1	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_29.AWWWTGCTGAGTCAT	homer_44.AVCAGCTG	0.581389	0.310074	0.310074	0.581389	15	8	8	15	0.533333	0.533333	1.000000	D	1	43
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_29.AWWWTGCTGAGTCAT	homer_45.SGTCACGTGR	0.638724	0.201702	0.255490	0.383235	15	10	6	19	0.315789	0.400000	0.600000	D	9	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_29.AWWWTGCTGAGTCAT	homer_46.NATGASTCABNN	0.824136	0.566593	0.604366	0.755458	15	12	11	16	0.687500	0.733333	0.916667	R	4	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_29.AWWWTGCTGAGTCAT	homer_47.GATGASTCATCN	0.833463	0.573006	0.611206	0.764007	15	12	11	16	0.687500	0.733333	0.916667	R	4	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_29.AWWWTGCTGAGTCAT	homer_48.AGTTTCASTTTC	0.355684	0.284547	0.284547	0.355684	15	12	12	15	0.800000	0.800000	1.000000	D	1	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_29.AWWWTGCTGAGTCAT	homer_49.RCAGGATGTGGT	0.339346	0.199616	0.226231	0.282789	15	12	10	17	0.588235	0.666667	0.833333	R	-2	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_29.AWWWTGCTGAGTCAT	homer_50.GGGGGAATCCCC	0.272069	0.187048	0.199518	0.249397	15	12	11	16	0.687500	0.733333	0.916667	D	4	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_29.AWWWTGCTGAGTCAT	homer_51.GCTGTGGTTW	0.398295	0.265530	0.265530	0.398295	15	10	10	15	0.666667	0.666667	1.000000	D	0	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_29.AWWWTGCTGAGTCAT	homer_52.GGATGACTCATC	0.803056	0.552101	0.588907	0.736134	15	12	11	16	0.687500	0.733333	0.916667	D	4	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_29.AWWWTGCTGAGTCAT	homer_53.NWAACCACADNN	0.382065	0.262670	0.280181	0.350226	15	12	11	16	0.687500	0.733333	0.916667	R	-1	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_29.AWWWTGCTGAGTCAT	homer_54.ACCATCTGTT	0.513706	0.241744	0.273976	0.410965	15	10	8	17	0.470588	0.533333	0.800000	D	-2	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_29.AWWWTGCTGAGTCAT	homer_55.SVYTTCCNGGAARB	0.164732	0.153750	0.153750	0.164732	15	14	14	15	0.933333	0.933333	1.000000	D	1	55
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_29.AWWWTGCTGAGTCAT	homer_56.SCCTAGCAACAG	0.440165	0.352132	0.352132	0.440165	15	12	12	15	0.800000	0.800000	1.000000	R	0	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_29.AWWWTGCTGAGTCAT	homer_57.AAACCACARM	0.328187	0.218791	0.218791	0.328187	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_29.AWWWTGCTGAGTCAT	homer_58.RTTATGYAAB	0.328321	0.218881	0.218881	0.328321	15	10	10	15	0.666667	0.666667	1.000000	R	5	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_29.AWWWTGCTGAGTCAT	homer_59.NYTTCCWGGAAR	0.200330	0.160264	0.160264	0.200330	15	12	12	15	0.800000	0.800000	1.000000	R	3	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_29.AWWWTGCTGAGTCAT	homer_60.ASWTCCTGBT	0.341561	0.227707	0.227707	0.341561	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_29.AWWWTGCTGAGTCAT	homer_61.DGGGYGKGGC	0.369853	0.246569	0.246569	0.369853	15	10	10	15	0.666667	0.666667	1.000000	D	3	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_29.AWWWTGCTGAGTCAT	homer_62.TWGTCTGV	0.454741	0.242529	0.242529	0.454741	15	8	8	15	0.533333	0.533333	1.000000	R	7	43
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_29.AWWWTGCTGAGTCAT	homer_63.CTGGCAGSCTGCCA	0.296758	0.156188	0.197838	0.211970	15	14	10	19	0.526316	0.666667	0.714286	R	-4	55
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_29.AWWWTGCTGAGTCAT	homer_64.VGGGRATTYCCC	0.296023	0.148011	0.177614	0.222017	15	12	9	18	0.500000	0.600000	0.750000	R	-3	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_29.AWWWTGCTGAGTCAT	homer_65.CARRGKBCAAAGTYCA	0.313037	0.293472	0.313037	0.293472	15	16	15	16	0.937500	1.000000	0.937500	D	-1	59
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_29.AWWWTGCTGAGTCAT	homer_66.CCATTGTTNY	0.367945	0.245297	0.245297	0.367945	15	10	10	15	0.666667	0.666667	1.000000	D	0	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_29.AWWWTGCTGAGTCAT	homer_67.CYAAAAATAG	0.274325	0.182883	0.182883	0.274325	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_29.AWWWTGCTGAGTCAT	homer_68.GGGGGGGG	0.140187	0.074767	0.074767	0.140187	15	8	8	15	0.533333	0.533333	1.000000	D	4	43
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_29.AWWWTGCTGAGTCAT	homer_69.TTGAMCTTTG	0.387341	0.258227	0.258227	0.387341	15	10	10	15	0.666667	0.666667	1.000000	R	5	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_29.AWWWTGCTGAGTCAT	homer_70.MGGAAGTGAAAC	0.546625	0.191319	0.255092	0.318865	15	12	7	20	0.350000	0.466667	0.583333	R	8	51
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_29.AWWWTGCTGAGTCAT	homer_71.HACTTCCGGY	0.315745	0.210496	0.210496	0.315745	15	10	10	15	0.666667	0.666667	1.000000	D	0	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_29.AWWWTGCTGAGTCAT	homer_72.NRYTTCCGGY	0.326974	0.217983	0.217983	0.326974	15	10	10	15	0.666667	0.666667	1.000000	D	0	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_29.AWWWTGCTGAGTCAT	homer_73.AWWNTGCTGAGTCAT	0.987301	0.987301	0.987301	0.987301	15	15	15	15	1.000000	1.000000	1.000000	D	0	57
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_29.AWWWTGCTGAGTCAT	homer_74.AGGCCTAG	0.329019	0.175477	0.175477	0.329019	15	8	8	15	0.533333	0.533333	1.000000	R	7	43
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_29.AWWWTGCTGAGTCAT	homer_75.VTTACGTAAYNNNNN	0.349637	0.349637	0.349637	0.349637	15	15	15	15	1.000000	1.000000	1.000000	R	0	57
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_29.AWWWTGCTGAGTCAT	homer_76.TGCTGACTCA	0.847262	0.564841	0.564841	0.847262	15	10	10	15	0.666667	0.666667	1.000000	D	4	47
hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_29.AWWWTGCTGAGTCAT	homer_77.ATTGCGCAAC	0.444106	0.296071	0.296071	0.444106	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_30.CAAAGGTCAG	homer_1.ATTTCCTGTN	0.375946	0.375946	0.375946	0.375946	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_30.CAAAGGTCAG	homer_2.ACCGGAAGTG	0.279249	0.186166	0.223399	0.223399	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_30.CAAAGGTCAG	homer_3.AACCGGAAGT	0.407232	0.219279	0.285062	0.285062	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_30.CAAAGGTCAG	homer_4.ACAGGAAGTG	0.221791	0.181465	0.199612	0.199612	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_30.CAAAGGTCAG	homer_5.RACCGGAAGT	0.232017	0.189832	0.208815	0.208815	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_30.CAAAGGTCAG	homer_6.AGAGGAAGTG	0.302301	0.201534	0.241841	0.241841	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_30.CAAAGGTCAG	homer_7.NNAYTTCCTGHN	0.326780	0.272317	0.326780	0.272317	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_30.CAAAGGTCAG	homer_8.NRYTTCCGGH	0.299976	0.245435	0.269978	0.269978	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_30.CAAAGGTCAG	homer_9.MACAGGAAGT	0.304094	0.304094	0.304094	0.304094	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_30.CAAAGGTCAG	homer_10.ACTTCCKGKT	0.267590	0.218937	0.240831	0.240831	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_30.CAAAGGTCAG	homer_11.ACVAGGAAGT	0.274518	0.224606	0.247066	0.247066	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_30.CAAAGGTCAG	homer_12.YCTTATCTBN	0.447445	0.366092	0.402701	0.402701	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_30.CAAAGGTCAG	homer_13.NBWGATAAGR	0.425727	0.348322	0.383154	0.383154	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_30.CAAAGGTCAG	homer_14.TGGCAGTTGG	0.512954	0.419690	0.461659	0.461659	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_30.CAAAGGTCAG	homer_15.AVCCGGAAGT	0.375154	0.202006	0.262608	0.262608	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_30.CAAAGGTCAG	homer_16.ANCAGGAAGT	0.228459	0.228459	0.228459	0.228459	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_30.CAAAGGTCAG	homer_17.SAGATAAGRV	0.454862	0.303241	0.363889	0.363889	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_30.CAAAGGTCAG	homer_18.TGCTGAGTCA	0.314491	0.257311	0.283042	0.283042	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_30.CAAAGGTCAG	homer_19.GCTATTTTTAGC	0.190781	0.158984	0.190781	0.158984	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_30.CAAAGGTCAG	homer_20.GGCVGTTR	0.496454	0.397163	0.397163	0.496454	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_30.CAAAGGTCAG	homer_21.CYTGGCABNSTGCCAR	0.439617	0.274761	0.439617	0.274761	10	16	10	16	0.625000	1.000000	0.625000	R	-5	49
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_30.CAAAGGTCAG	homer_22.BBCTTATCTS	0.469563	0.313042	0.375650	0.375650	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_30.CAAAGGTCAG	homer_23.VACAGGAAAT	0.307363	0.307363	0.307363	0.307363	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_30.CAAAGGTCAG	homer_24.RGKGGGCGKGGC	0.344234	0.238316	0.309810	0.258175	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_30.CAAAGGTCAG	homer_25.AGATAASR	0.476201	0.303037	0.333340	0.416676	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_30.CAAAGGTCAG	homer_26.YGGCCCCGCCCC	0.423625	0.197692	0.296538	0.247115	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_30.CAAAGGTCAG	homer_27.AVCAGGAAGT	0.216869	0.216869	0.216869	0.216869	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_30.CAAAGGTCAG	homer_28.RGKGGGCGGAGC	0.383508	0.265505	0.345157	0.287631	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_30.CAAAGGTCAG	homer_29.AWWWTGCTGAGTCAT	0.330399	0.220266	0.330399	0.220266	10	15	10	15	0.666667	1.000000	0.666667	D	-5	47
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_30.CAAAGGTCAG	homer_30.CAAAGGTCAG	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_30.CAAAGGTCAG	homer_31.VTGACTCATC	0.347718	0.347718	0.347718	0.347718	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_30.CAAAGGTCAG	homer_32.AAAGRGGAAGTG	0.314185	0.261821	0.314185	0.261821	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_30.CAAAGGTCAG	homer_33.GRAASTGAAAST	0.256501	0.213751	0.256501	0.213751	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_30.CAAAGGTCAG	homer_34.CCCCTCCCCCAC	0.269922	0.186869	0.242930	0.202441	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_30.CAAAGGTCAG	homer_35.GAAAGTGAAAGT	0.322821	0.269017	0.322821	0.269017	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_30.CAAAGGTCAG	homer_36.DATGASTCATHN	0.293422	0.244519	0.293422	0.244519	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_30.CAAAGGTCAG	homer_37.NDATGASTCAYN	0.279754	0.233128	0.279754	0.233128	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_30.CAAAGGTCAG	homer_38.RATGASTCAT	0.278509	0.278509	0.278509	0.278509	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_30.CAAAGGTCAG	homer_39.DATGASTCAT	0.291166	0.291166	0.291166	0.291166	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_30.CAAAGGTCAG	homer_40.AGTTTCAKTTTC	0.272224	0.226853	0.272224	0.226853	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_30.CAAAGGTCAG	homer_41.NNATGASTCATH	0.281519	0.234599	0.281519	0.234599	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_30.CAAAGGTCAG	homer_42.SAAACCACAG	0.421927	0.421927	0.421927	0.421927	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_30.CAAAGGTCAG	homer_43.GAAASYGAAASY	0.343048	0.285873	0.343048	0.285873	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_30.CAAAGGTCAG	homer_44.AVCAGCTG	0.662093	0.254651	0.331047	0.413808	10	8	5	13	0.384615	0.500000	0.625000	D	5	33
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_30.CAAAGGTCAG	homer_45.SGTCACGTGR	0.748783	0.320907	0.449270	0.449270	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_30.CAAAGGTCAG	homer_46.NATGASTCABNN	0.291667	0.243056	0.291667	0.243056	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_30.CAAAGGTCAG	homer_47.GATGASTCATCN	0.303934	0.253278	0.303934	0.253278	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_30.CAAAGGTCAG	homer_48.AGTTTCASTTTC	0.286922	0.239102	0.286922	0.239102	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_30.CAAAGGTCAG	homer_49.RCAGGATGTGGT	0.237405	0.164357	0.213665	0.178054	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_30.CAAAGGTCAG	homer_50.GGGGGAATCCCC	0.318399	0.181943	0.254720	0.212266	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_30.CAAAGGTCAG	homer_51.GCTGTGGTTW	0.399194	0.326613	0.359274	0.359274	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_30.CAAAGGTCAG	homer_52.GGATGACTCATC	0.326444	0.272037	0.326444	0.272037	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_30.CAAAGGTCAG	homer_53.NWAACCACADNN	0.336713	0.280594	0.336713	0.280594	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_30.CAAAGGTCAG	homer_54.ACCATCTGTT	0.428148	0.285432	0.342519	0.342519	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_30.CAAAGGTCAG	homer_55.SVYTTCCNGGAARB	0.329262	0.109754	0.197557	0.141112	10	14	6	18	0.333333	0.600000	0.428571	R	-8	45
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_30.CAAAGGTCAG	homer_56.SCCTAGCAACAG	0.621505	0.233064	0.372903	0.310752	10	12	6	16	0.375000	0.600000	0.500000	R	-6	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_30.CAAAGGTCAG	homer_57.AAACCACARM	0.410657	0.335992	0.369592	0.369592	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_30.CAAAGGTCAG	homer_58.RTTATGYAAB	0.170475	0.170475	0.170475	0.170475	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_30.CAAAGGTCAG	homer_59.NYTTCCWGGAAR	0.158363	0.131969	0.158363	0.131969	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_30.CAAAGGTCAG	homer_60.ASWTCCTGBT	0.343066	0.184728	0.240146	0.240146	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_30.CAAAGGTCAG	homer_61.DGGGYGKGGC	0.331836	0.221224	0.265469	0.265469	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_30.CAAAGGTCAG	homer_62.TWGTCTGV	0.780653	0.223044	0.312261	0.390327	10	8	4	14	0.285714	0.400000	0.500000	R	6	33
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_30.CAAAGGTCAG	homer_63.CTGGCAGSCTGCCA	0.299491	0.213922	0.299491	0.213922	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_30.CAAAGGTCAG	homer_64.VGGGRATTYCCC	0.358199	0.204685	0.286559	0.238799	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_30.CAAAGGTCAG	homer_65.CARRGKBCAAAGTYCA	0.785437	0.490898	0.785437	0.490898	10	16	10	16	0.625000	1.000000	0.625000	D	0	49
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_30.CAAAGGTCAG	homer_66.CCATTGTTNY	0.655318	0.280851	0.393191	0.393191	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_30.CAAAGGTCAG	homer_67.CYAAAAATAG	0.186336	0.186336	0.186336	0.186336	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_30.CAAAGGTCAG	homer_68.GGGGGGGG	0.408313	0.204157	0.244988	0.306235	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_30.CAAAGGTCAG	homer_69.TTGAMCTTTG	0.907080	0.907080	0.907080	0.907080	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_30.CAAAGGTCAG	homer_70.MGGAAGTGAAAC	0.298933	0.249111	0.298933	0.249111	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_30.CAAAGGTCAG	homer_71.HACTTCCGGY	0.286377	0.190918	0.229102	0.229102	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_30.CAAAGGTCAG	homer_72.NRYTTCCGGY	0.295860	0.197240	0.236688	0.236688	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_30.CAAAGGTCAG	homer_73.AWWNTGCTGAGTCAT	0.282202	0.188134	0.282202	0.188134	10	15	10	15	0.666667	1.000000	0.666667	D	-5	47
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_30.CAAAGGTCAG	homer_74.AGGCCTAG	0.554424	0.443539	0.443539	0.554424	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_30.CAAAGGTCAG	homer_75.VTTACGTAAYNNNNN	0.224458	0.149639	0.224458	0.149639	10	15	10	15	0.666667	1.000000	0.666667	R	0	47
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_30.CAAAGGTCAG	homer_76.TGCTGACTCA	0.557030	0.371353	0.445624	0.445624	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_30.CAAAGGTCAG	homer_77.ATTGCGCAAC	0.287555	0.235272	0.258799	0.258799	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_31.VTGACTCATC	homer_1.ATTTCCTGTN	0.473879	0.203091	0.284327	0.284327	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_31.VTGACTCATC	homer_2.ACCGGAAGTG	0.193488	0.158308	0.174139	0.174139	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_31.VTGACTCATC	homer_3.AACCGGAAGT	0.243965	0.131366	0.170775	0.170775	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_31.VTGACTCATC	homer_4.ACAGGAAGTG	0.307341	0.131718	0.184405	0.184405	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_31.VTGACTCATC	homer_5.RACCGGAAGT	0.179648	0.119765	0.143718	0.143718	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_31.VTGACTCATC	homer_6.AGAGGAAGTG	0.344379	0.229586	0.275503	0.275503	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_31.VTGACTCATC	homer_7.NNAYTTCCTGHN	0.251283	0.209402	0.251283	0.209402	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_31.VTGACTCATC	homer_8.NRYTTCCGGH	0.228727	0.187140	0.205854	0.205854	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_31.VTGACTCATC	homer_9.MACAGGAAGT	0.413610	0.177261	0.248166	0.248166	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_31.VTGACTCATC	homer_10.ACTTCCKGKT	0.204511	0.167327	0.184060	0.184060	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_31.VTGACTCATC	homer_11.ACVAGGAAGT	0.278533	0.227890	0.250679	0.250679	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_31.VTGACTCATC	homer_12.YCTTATCTBN	0.451416	0.243070	0.315991	0.315991	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_31.VTGACTCATC	homer_13.NBWGATAAGR	0.464387	0.250054	0.325071	0.325071	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_31.VTGACTCATC	homer_14.TGGCAGTTGG	0.406608	0.174260	0.243965	0.243965	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_31.VTGACTCATC	homer_15.AVCCGGAAGT	0.183123	0.122082	0.146499	0.146499	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_31.VTGACTCATC	homer_16.ANCAGGAAGT	0.285504	0.233594	0.256953	0.256953	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_31.VTGACTCATC	homer_17.SAGATAAGRV	0.421042	0.280695	0.336834	0.336834	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_31.VTGACTCATC	homer_18.TGCTGAGTCA	0.953740	0.780333	0.858366	0.858366	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_31.VTGACTCATC	homer_19.GCTATTTTTAGC	0.143428	0.119523	0.143428	0.119523	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_31.VTGACTCATC	homer_20.GGCVGTTR	0.417905	0.160733	0.208953	0.261191	10	8	5	13	0.384615	0.500000	0.625000	R	-3	33
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_31.VTGACTCATC	homer_21.CYTGGCABNSTGCCAR	0.368786	0.230492	0.368786	0.230492	10	16	10	16	0.625000	1.000000	0.625000	R	0	49
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_31.VTGACTCATC	homer_22.BBCTTATCTS	0.407422	0.271615	0.325938	0.325938	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_31.VTGACTCATC	homer_23.VACAGGAAAT	0.440244	0.188676	0.264146	0.264146	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_31.VTGACTCATC	homer_24.RGKGGGCGKGGC	0.247731	0.141561	0.198185	0.165154	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_31.VTGACTCATC	homer_25.AGATAASR	0.407854	0.259544	0.285498	0.356873	10	8	7	11	0.636364	0.700000	0.875000	R	3	33
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_31.VTGACTCATC	homer_26.YGGCCCCGCCCC	0.221570	0.184642	0.221570	0.184642	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_31.VTGACTCATC	homer_27.AVCAGGAAGT	0.214907	0.175833	0.193417	0.193417	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_31.VTGACTCATC	homer_28.RGKGGGCGGAGC	0.351021	0.163810	0.245715	0.204762	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_31.VTGACTCATC	homer_29.AWWWTGCTGAGTCAT	0.896782	0.597855	0.896782	0.597855	10	15	10	15	0.666667	1.000000	0.666667	R	0	47
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_31.VTGACTCATC	homer_30.CAAAGGTCAG	0.347718	0.347718	0.347718	0.347718	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_31.VTGACTCATC	homer_31.VTGACTCATC	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_31.VTGACTCATC	homer_32.AAAGRGGAAGTG	0.241943	0.201619	0.241943	0.201619	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_31.VTGACTCATC	homer_33.GRAASTGAAAST	0.359867	0.205638	0.287894	0.239911	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_31.VTGACTCATC	homer_34.CCCCTCCCCCAC	0.289089	0.200138	0.260180	0.216817	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_31.VTGACTCATC	homer_35.GAAAGTGAAAGT	0.348386	0.199077	0.278708	0.232257	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_31.VTGACTCATC	homer_36.DATGASTCATHN	0.987853	0.823211	0.987853	0.823211	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_31.VTGACTCATC	homer_37.NDATGASTCAYN	0.971997	0.809998	0.971997	0.809998	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_31.VTGACTCATC	homer_38.RATGASTCAT	0.987228	0.987228	0.987228	0.987228	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_31.VTGACTCATC	homer_39.DATGASTCAT	0.985011	0.985011	0.985011	0.985011	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_31.VTGACTCATC	homer_40.AGTTTCAKTTTC	0.360026	0.205729	0.288021	0.240017	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_31.VTGACTCATC	homer_41.NNATGASTCATH	0.976406	0.813672	0.976406	0.813672	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_31.VTGACTCATC	homer_42.SAAACCACAG	0.258011	0.172007	0.206409	0.206409	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_31.VTGACTCATC	homer_43.GAAASYGAAASY	0.239338	0.136764	0.191470	0.159559	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_31.VTGACTCATC	homer_44.AVCAGCTG	0.562960	0.281480	0.337776	0.422220	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_31.VTGACTCATC	homer_45.SGTCACGTGR	0.654072	0.280317	0.392443	0.392443	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_31.VTGACTCATC	homer_46.NATGASTCABNN	0.985587	0.821322	0.985587	0.821322	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_31.VTGACTCATC	homer_47.GATGASTCATCN	0.992696	0.827247	0.992696	0.827247	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_31.VTGACTCATC	homer_48.AGTTTCASTTTC	0.333737	0.231049	0.300363	0.250303	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_31.VTGACTCATC	homer_49.RCAGGATGTGGT	0.288969	0.165125	0.231175	0.192646	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_31.VTGACTCATC	homer_50.GGGGGAATCCCC	0.341996	0.284996	0.341996	0.284996	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_31.VTGACTCATC	homer_51.GCTGTGGTTW	0.193002	0.193002	0.193002	0.193002	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_31.VTGACTCATC	homer_52.GGATGACTCATC	0.992955	0.827463	0.992955	0.827463	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_31.VTGACTCATC	homer_53.NWAACCACADNN	0.223501	0.186251	0.223501	0.186251	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_31.VTGACTCATC	homer_54.ACCATCTGTT	0.573475	0.245775	0.344085	0.344085	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_31.VTGACTCATC	homer_55.SVYTTCCNGGAARB	0.182409	0.091204	0.145927	0.104234	10	14	8	16	0.500000	0.800000	0.571429	D	2	45
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_31.VTGACTCATC	homer_56.SCCTAGCAACAG	0.217080	0.180900	0.217080	0.180900	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_31.VTGACTCATC	homer_57.AAACCACARM	0.194502	0.194502	0.194502	0.194502	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_31.VTGACTCATC	homer_58.RTTATGYAAB	0.360077	0.360077	0.360077	0.360077	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_31.VTGACTCATC	homer_59.NYTTCCWGGAAR	0.201928	0.115388	0.161543	0.134619	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_31.VTGACTCATC	homer_60.ASWTCCTGBT	0.272488	0.181659	0.217991	0.217991	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_31.VTGACTCATC	homer_61.DGGGYGKGGC	0.403601	0.269067	0.322880	0.322880	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_31.VTGACTCATC	homer_62.TWGTCTGV	0.391417	0.313133	0.313133	0.391417	10	8	8	10	0.800000	0.800000	1.000000	D	0	33
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_31.VTGACTCATC	homer_63.CTGGCAGSCTGCCA	0.287225	0.205161	0.287225	0.205161	10	14	10	14	0.714286	1.000000	0.714286	D	0	45
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_31.VTGACTCATC	homer_64.VGGGRATTYCCC	0.163205	0.136004	0.163205	0.136004	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_31.VTGACTCATC	homer_65.CARRGKBCAAAGTYCA	0.347843	0.217402	0.347843	0.217402	10	16	10	16	0.625000	1.000000	0.625000	R	-6	49
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_31.VTGACTCATC	homer_66.CCATTGTTNY	0.179078	0.179078	0.179078	0.179078	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_31.VTGACTCATC	homer_67.CYAAAAATAG	0.256281	0.109835	0.153769	0.153769	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_31.VTGACTCATC	homer_68.GGGGGGGG	0.218295	0.109147	0.130977	0.163721	10	8	6	12	0.500000	0.600000	0.750000	R	4	33
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_31.VTGACTCATC	homer_69.TTGAMCTTTG	0.407271	0.407271	0.407271	0.407271	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_31.VTGACTCATC	homer_70.MGGAAGTGAAAC	0.577653	0.269571	0.404357	0.336964	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_31.VTGACTCATC	homer_71.HACTTCCGGY	0.193996	0.158724	0.174597	0.174597	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_31.VTGACTCATC	homer_72.NRYTTCCGGY	0.218956	0.179145	0.197060	0.197060	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_31.VTGACTCATC	homer_73.AWWNTGCTGAGTCAT	0.907803	0.605202	0.907803	0.605202	10	15	10	15	0.666667	1.000000	0.666667	R	0	47
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_31.VTGACTCATC	homer_74.AGGCCTAG	0.227624	0.182099	0.182099	0.227624	10	8	8	10	0.800000	0.800000	1.000000	D	0	33
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_31.VTGACTCATC	homer_75.VTTACGTAAYNNNNN	0.396515	0.264343	0.396515	0.264343	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_31.VTGACTCATC	homer_76.TGCTGACTCA	0.763447	0.624639	0.687103	0.687103	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_31.VTGACTCATC	homer_77.ATTGCGCAAC	0.346835	0.346835	0.346835	0.346835	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_32.AAAGRGGAAGTG	homer_1.ATTTCCTGTN	0.727119	0.605933	0.605933	0.727119	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_32.AAAGRGGAAGTG	homer_2.ACCGGAAGTG	0.784551	0.653793	0.653793	0.784551	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_32.AAAGRGGAAGTG	homer_3.AACCGGAAGT	0.806208	0.671840	0.671840	0.806208	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_32.AAAGRGGAAGTG	homer_4.ACAGGAAGTG	0.868265	0.723555	0.723555	0.868265	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_32.AAAGRGGAAGTG	homer_5.RACCGGAAGT	0.825603	0.688003	0.688003	0.825603	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_32.AAAGRGGAAGTG	homer_6.AGAGGAAGTG	0.952270	0.793558	0.793558	0.952270	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_32.AAAGRGGAAGTG	homer_7.NNAYTTCCTGHN	0.792819	0.670847	0.726751	0.726751	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_32.AAAGRGGAAGTG	homer_8.NRYTTCCGGH	0.803143	0.669286	0.669286	0.803143	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_32.AAAGRGGAAGTG	homer_9.MACAGGAAGT	0.799993	0.666661	0.666661	0.799993	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_32.AAAGRGGAAGTG	homer_10.ACTTCCKGKT	0.900348	0.750290	0.750290	0.900348	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_32.AAAGRGGAAGTG	homer_11.ACVAGGAAGT	0.888497	0.740414	0.740414	0.888497	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_32.AAAGRGGAAGTG	homer_12.YCTTATCTBN	0.271403	0.226169	0.226169	0.271403	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_32.AAAGRGGAAGTG	homer_13.NBWGATAAGR	0.240886	0.200739	0.200739	0.240886	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_32.AAAGRGGAAGTG	homer_14.TGGCAGTTGG	0.543514	0.253640	0.317050	0.380460	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_32.AAAGRGGAAGTG	homer_15.AVCCGGAAGT	0.797213	0.664344	0.664344	0.797213	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_32.AAAGRGGAAGTG	homer_16.ANCAGGAAGT	0.882626	0.735522	0.735522	0.882626	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_32.AAAGRGGAAGTG	homer_17.SAGATAAGRV	0.274516	0.228763	0.228763	0.274516	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_32.AAAGRGGAAGTG	homer_18.TGCTGAGTCA	0.166522	0.138768	0.138768	0.166522	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_32.AAAGRGGAAGTG	homer_19.GCTATTTTTAGC	0.482603	0.198719	0.281519	0.281519	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_32.AAAGRGGAAGTG	homer_20.GGCVGTTR	0.555740	0.238174	0.277870	0.416805	12	8	6	14	0.428571	0.500000	0.750000	R	6	37
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_32.AAAGRGGAAGTG	homer_21.CYTGGCABNSTGCCAR	0.353160	0.196200	0.294300	0.220725	12	16	10	18	0.555556	0.833333	0.625000	D	2	53
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_32.AAAGRGGAAGTG	homer_22.BBCTTATCTS	0.280941	0.234117	0.234117	0.280941	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_32.AAAGRGGAAGTG	homer_23.VACAGGAAAT	0.750636	0.625530	0.625530	0.750636	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_32.AAAGRGGAAGTG	homer_24.RGKGGGCGKGGC	0.465863	0.332759	0.388219	0.388219	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_32.AAAGRGGAAGTG	homer_25.AGATAASR	0.429002	0.183858	0.214501	0.321752	12	8	6	14	0.428571	0.500000	0.750000	D	-2	37
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_32.AAAGRGGAAGTG	homer_26.YGGCCCCGCCCC	0.280929	0.280929	0.280929	0.280929	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_32.AAAGRGGAAGTG	homer_27.AVCAGGAAGT	0.880061	0.733384	0.733384	0.880061	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_32.AAAGRGGAAGTG	homer_28.RGKGGGCGGAGC	0.314843	0.266406	0.288606	0.288606	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_32.AAAGRGGAAGTG	homer_29.AWWWTGCTGAGTCAT	0.222242	0.177794	0.222242	0.177794	12	15	12	15	0.800000	1.000000	0.800000	R	-3	51
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_32.AAAGRGGAAGTG	homer_30.CAAAGGTCAG	0.314185	0.261821	0.261821	0.314185	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_32.AAAGRGGAAGTG	homer_31.VTGACTCATC	0.241943	0.201619	0.201619	0.241943	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_32.AAAGRGGAAGTG	homer_32.AAAGRGGAAGTG	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_32.AAAGRGGAAGTG	homer_33.GRAASTGAAAST	0.680837	0.576093	0.624101	0.624101	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_32.AAAGRGGAAGTG	homer_34.CCCCTCCCCCAC	0.389399	0.389399	0.389399	0.389399	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_32.AAAGRGGAAGTG	homer_35.GAAAGTGAAAGT	0.700097	0.592390	0.641756	0.641756	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_32.AAAGRGGAAGTG	homer_36.DATGASTCATHN	0.223406	0.223406	0.223406	0.223406	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_32.AAAGRGGAAGTG	homer_37.NDATGASTCAYN	0.232622	0.232622	0.232622	0.232622	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_32.AAAGRGGAAGTG	homer_38.RATGASTCAT	0.247857	0.206548	0.206548	0.247857	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_32.AAAGRGGAAGTG	homer_39.DATGASTCAT	0.243862	0.203218	0.203218	0.243862	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_32.AAAGRGGAAGTG	homer_40.AGTTTCAKTTTC	0.681663	0.576792	0.624858	0.624858	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_32.AAAGRGGAAGTG	homer_41.NNATGASTCATH	0.239096	0.239096	0.239096	0.239096	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_32.AAAGRGGAAGTG	homer_42.SAAACCACAG	0.297486	0.205952	0.223115	0.267738	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_32.AAAGRGGAAGTG	homer_43.GAAASYGAAASY	0.726639	0.614848	0.666086	0.666086	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_32.AAAGRGGAAGTG	homer_44.AVCAGCTG	0.281651	0.187767	0.187767	0.281651	12	8	8	12	0.666667	0.666667	1.000000	R	1	37
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_32.AAAGRGGAAGTG	homer_45.SGTCACGTGR	0.379499	0.262730	0.284625	0.341549	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_32.AAAGRGGAAGTG	homer_46.NATGASTCABNN	0.258501	0.258501	0.258501	0.258501	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_32.AAAGRGGAAGTG	homer_47.GATGASTCATCN	0.200237	0.200237	0.200237	0.200237	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_32.AAAGRGGAAGTG	homer_48.AGTTTCASTTTC	0.668632	0.565766	0.612913	0.612913	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_32.AAAGRGGAAGTG	homer_49.RCAGGATGTGGT	0.806091	0.575779	0.671742	0.671742	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_32.AAAGRGGAAGTG	homer_50.GGGGGAATCCCC	0.480883	0.343488	0.400735	0.400735	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_32.AAAGRGGAAGTG	homer_51.GCTGTGGTTW	0.237952	0.198294	0.198294	0.237952	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_32.AAAGRGGAAGTG	homer_52.GGATGACTCATC	0.205426	0.205426	0.205426	0.205426	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_32.AAAGRGGAAGTG	homer_53.NWAACCACADNN	0.202527	0.171369	0.185650	0.185650	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_32.AAAGRGGAAGTG	homer_54.ACCATCTGTT	0.319008	0.265840	0.265840	0.319008	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_32.AAAGRGGAAGTG	homer_55.SVYTTCCNGGAARB	0.453601	0.388801	0.453601	0.388801	12	14	12	14	0.857143	1.000000	0.857143	R	-2	49
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_32.AAAGRGGAAGTG	homer_56.SCCTAGCAACAG	0.326560	0.326560	0.326560	0.326560	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_32.AAAGRGGAAGTG	homer_57.AAACCACARM	0.289427	0.241189	0.241189	0.289427	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_32.AAAGRGGAAGTG	homer_58.RTTATGYAAB	0.328710	0.273925	0.273925	0.328710	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_32.AAAGRGGAAGTG	homer_59.NYTTCCWGGAAR	0.436022	0.368942	0.399687	0.399687	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_32.AAAGRGGAAGTG	homer_60.ASWTCCTGBT	0.692967	0.577473	0.577473	0.692967	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_32.AAAGRGGAAGTG	homer_61.DGGGYGKGGC	0.474698	0.271256	0.316465	0.379759	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_32.AAAGRGGAAGTG	homer_62.TWGTCTGV	0.622573	0.109866	0.155643	0.233465	12	8	3	17	0.176471	0.250000	0.375000	D	9	37
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_32.AAAGRGGAAGTG	homer_63.CTGGCAGSCTGCCA	0.457052	0.203134	0.304701	0.261172	12	14	8	18	0.444444	0.666667	0.571429	R	4	49
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_32.AAAGRGGAAGTG	homer_64.VGGGRATTYCCC	0.519130	0.311478	0.389347	0.389347	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_32.AAAGRGGAAGTG	homer_65.CARRGKBCAAAGTYCA	0.320629	0.240471	0.320629	0.240471	12	16	12	16	0.750000	1.000000	0.750000	D	-2	53
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_32.AAAGRGGAAGTG	homer_66.CCATTGTTNY	0.372336	0.310280	0.310280	0.372336	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_32.AAAGRGGAAGTG	homer_67.CYAAAAATAG	0.695153	0.260682	0.347576	0.417092	12	10	6	16	0.375000	0.500000	0.600000	D	-4	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_32.AAAGRGGAAGTG	homer_68.GGGGGGGG	0.483272	0.260223	0.281909	0.422863	12	8	7	13	0.538462	0.583333	0.875000	D	-1	37
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_32.AAAGRGGAAGTG	homer_69.TTGAMCTTTG	0.380697	0.263560	0.285523	0.342628	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_32.AAAGRGGAAGTG	homer_70.MGGAAGTGAAAC	0.967625	0.483813	0.645083	0.645083	12	12	8	16	0.500000	0.666667	0.666667	D	4	45
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_32.AAAGRGGAAGTG	homer_71.HACTTCCGGY	0.783107	0.652589	0.652589	0.783107	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_32.AAAGRGGAAGTG	homer_72.NRYTTCCGGY	0.732438	0.610365	0.610365	0.732438	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_32.AAAGRGGAAGTG	homer_73.AWWNTGCTGAGTCAT	0.581407	0.166116	0.290703	0.232563	12	15	6	21	0.285714	0.500000	0.400000	D	6	51
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_32.AAAGRGGAAGTG	homer_74.AGGCCTAG	0.218211	0.145474	0.145474	0.218211	12	8	8	12	0.666667	0.666667	1.000000	D	4	37
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_32.AAAGRGGAAGTG	homer_75.VTTACGTAAYNNNNN	0.279697	0.223757	0.279697	0.223757	12	15	12	15	0.800000	1.000000	0.800000	D	0	51
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_32.AAAGRGGAAGTG	homer_76.TGCTGACTCA	0.228082	0.190069	0.190069	0.228082	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_32.AAAGRGGAAGTG	homer_77.ATTGCGCAAC	0.435353	0.362794	0.362794	0.435353	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_33.GRAASTGAAAST	homer_1.ATTTCCTGTN	0.465793	0.388161	0.388161	0.465793	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_33.GRAASTGAAAST	homer_2.ACCGGAAGTG	0.599998	0.415383	0.449999	0.539998	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_33.GRAASTGAAAST	homer_3.AACCGGAAGT	0.620032	0.516693	0.516693	0.620032	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_33.GRAASTGAAAST	homer_4.ACAGGAAGTG	0.600675	0.415852	0.450506	0.540607	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_33.GRAASTGAAAST	homer_5.RACCGGAAGT	0.610969	0.509141	0.509141	0.610969	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_33.GRAASTGAAAST	homer_6.AGAGGAAGTG	0.626588	0.433792	0.469941	0.563929	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_33.GRAASTGAAAST	homer_7.NNAYTTCCTGHN	0.512146	0.365818	0.426788	0.426788	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_33.GRAASTGAAAST	homer_8.NRYTTCCGGH	0.590175	0.408583	0.442632	0.531158	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_33.GRAASTGAAAST	homer_9.MACAGGAAGT	0.579621	0.483018	0.483018	0.579621	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_33.GRAASTGAAAST	homer_10.ACTTCCKGKT	0.632031	0.526693	0.526693	0.632031	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_33.GRAASTGAAAST	homer_11.ACVAGGAAGT	0.607568	0.506306	0.506306	0.607568	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_33.GRAASTGAAAST	homer_12.YCTTATCTBN	0.414569	0.287009	0.310927	0.373112	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_33.GRAASTGAAAST	homer_13.NBWGATAAGR	0.428728	0.296812	0.321546	0.385855	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_33.GRAASTGAAAST	homer_14.TGGCAGTTGG	0.467684	0.389737	0.389737	0.467684	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_33.GRAASTGAAAST	homer_15.AVCCGGAAGT	0.604021	0.503351	0.503351	0.604021	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_33.GRAASTGAAAST	homer_16.ANCAGGAAGT	0.590462	0.492052	0.492052	0.590462	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_33.GRAASTGAAAST	homer_17.SAGATAAGRV	0.455412	0.260235	0.303608	0.364329	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_33.GRAASTGAAAST	homer_18.TGCTGAGTCA	0.354893	0.165617	0.207021	0.248425	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_33.GRAASTGAAAST	homer_19.GCTATTTTTAGC	0.386516	0.231910	0.289887	0.289887	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_33.GRAASTGAAAST	homer_20.GGCVGTTR	0.466498	0.310999	0.310999	0.466498	12	8	8	12	0.666667	0.666667	1.000000	R	1	37
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_33.GRAASTGAAAST	homer_21.CYTGGCABNSTGCCAR	0.190627	0.142970	0.190627	0.142970	12	16	12	16	0.750000	1.000000	0.750000	D	-3	53
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_33.GRAASTGAAAST	homer_22.BBCTTATCTS	0.459587	0.262621	0.306391	0.367669	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_33.GRAASTGAAAST	homer_23.VACAGGAAAT	0.543945	0.453287	0.453287	0.543945	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_33.GRAASTGAAAST	homer_24.RGKGGGCGKGGC	0.260129	0.156077	0.195097	0.195097	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_33.GRAASTGAAAST	homer_25.AGATAASR	0.502728	0.270700	0.293258	0.439887	12	8	7	13	0.538462	0.583333	0.875000	D	5	37
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_33.GRAASTGAAAST	homer_26.YGGCCCCGCCCC	0.187197	0.158398	0.171598	0.171598	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_33.GRAASTGAAAST	homer_27.AVCAGGAAGT	0.597241	0.497701	0.497701	0.597241	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_33.GRAASTGAAAST	homer_28.RGKGGGCGGAGC	0.223199	0.188861	0.204600	0.204600	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_33.GRAASTGAAAST	homer_29.AWWWTGCTGAGTCAT	0.235462	0.188370	0.235462	0.188370	12	15	12	15	0.800000	1.000000	0.800000	R	-2	51
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_33.GRAASTGAAAST	homer_30.CAAAGGTCAG	0.256501	0.213751	0.213751	0.256501	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_33.GRAASTGAAAST	homer_31.VTGACTCATC	0.359867	0.205638	0.239911	0.287894	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_33.GRAASTGAAAST	homer_32.AAAGRGGAAGTG	0.680837	0.576093	0.624101	0.624101	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_33.GRAASTGAAAST	homer_33.GRAASTGAAAST	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_33.GRAASTGAAAST	homer_34.CCCCTCCCCCAC	0.507245	0.208865	0.295893	0.295893	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_33.GRAASTGAAAST	homer_35.GAAAGTGAAAGT	0.950731	0.950731	0.950731	0.950731	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_33.GRAASTGAAAST	homer_36.DATGASTCATHN	0.292899	0.209214	0.244083	0.244083	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_33.GRAASTGAAAST	homer_37.NDATGASTCAYN	0.320811	0.192487	0.240608	0.240608	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_33.GRAASTGAAAST	homer_38.RATGASTCAT	0.299624	0.207432	0.224718	0.269661	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_33.GRAASTGAAAST	homer_39.DATGASTCAT	0.292404	0.202434	0.219303	0.263164	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_33.GRAASTGAAAST	homer_40.AGTTTCAKTTTC	0.951732	0.951732	0.951732	0.951732	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_33.GRAASTGAAAST	homer_41.NNATGASTCATH	0.260003	0.185716	0.216669	0.216669	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_33.GRAASTGAAAST	homer_42.SAAACCACAG	0.340408	0.283674	0.283674	0.340408	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_33.GRAASTGAAAST	homer_43.GAAASYGAAASY	0.941228	0.941228	0.941228	0.941228	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_33.GRAASTGAAAST	homer_44.AVCAGCTG	0.279993	0.186662	0.186662	0.279993	12	8	8	12	0.666667	0.666667	1.000000	R	1	37
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_33.GRAASTGAAAST	homer_45.SGTCACGTGR	0.269269	0.224391	0.224391	0.269269	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_33.GRAASTGAAAST	homer_46.NATGASTCABNN	0.273818	0.195584	0.228182	0.228182	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_33.GRAASTGAAAST	homer_47.GATGASTCATCN	0.277898	0.198499	0.231582	0.231582	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_33.GRAASTGAAAST	homer_48.AGTTTCASTTTC	0.939562	0.939562	0.939562	0.939562	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_33.GRAASTGAAAST	homer_49.RCAGGATGTGGT	0.563315	0.337989	0.422486	0.422486	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_33.GRAASTGAAAST	homer_50.GGGGGAATCCCC	0.313876	0.188326	0.235407	0.235407	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_33.GRAASTGAAAST	homer_51.GCTGTGGTTW	0.309127	0.257606	0.257606	0.309127	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_33.GRAASTGAAAST	homer_52.GGATGACTCATC	0.262206	0.187290	0.218505	0.218505	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_33.GRAASTGAAAST	homer_53.NWAACCACADNN	0.279244	0.236283	0.255973	0.255973	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_33.GRAASTGAAAST	homer_54.ACCATCTGTT	0.318078	0.265065	0.265065	0.318078	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_33.GRAASTGAAAST	homer_55.SVYTTCCNGGAARB	0.814695	0.300151	0.475239	0.407348	12	14	7	19	0.368421	0.583333	0.500000	R	-7	49
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_33.GRAASTGAAAST	homer_56.SCCTAGCAACAG	0.307029	0.259794	0.281444	0.281444	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_33.GRAASTGAAAST	homer_57.AAACCACARM	0.368092	0.306743	0.306743	0.368092	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_33.GRAASTGAAAST	homer_58.RTTATGYAAB	0.341527	0.284605	0.284605	0.341527	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_33.GRAASTGAAAST	homer_59.NYTTCCWGGAAR	0.861569	0.287190	0.430785	0.430785	12	12	6	18	0.333333	0.500000	0.500000	R	-6	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_33.GRAASTGAAAST	homer_60.ASWTCCTGBT	0.478402	0.398668	0.398668	0.478402	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_33.GRAASTGAAAST	homer_61.DGGGYGKGGC	0.237766	0.164607	0.178324	0.213989	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_33.GRAASTGAAAST	homer_62.TWGTCTGV	0.324789	0.174886	0.189460	0.284190	12	8	7	13	0.538462	0.583333	0.875000	R	5	37
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_33.GRAASTGAAAST	homer_63.CTGGCAGSCTGCCA	0.376500	0.167333	0.251000	0.215143	12	14	8	18	0.444444	0.666667	0.571429	D	4	49
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_33.GRAASTGAAAST	homer_64.VGGGRATTYCCC	0.516807	0.258403	0.344538	0.344538	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_33.GRAASTGAAAST	homer_65.CARRGKBCAAAGTYCA	0.435543	0.326657	0.435543	0.326657	12	16	12	16	0.750000	1.000000	0.750000	D	-1	53
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_33.GRAASTGAAAST	homer_66.CCATTGTTNY	0.242239	0.201866	0.201866	0.242239	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_33.GRAASTGAAAST	homer_67.CYAAAAATAG	0.528529	0.302017	0.352353	0.422823	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_33.GRAASTGAAAST	homer_68.GGGGGGGG	0.296867	0.197912	0.197912	0.296867	12	8	8	12	0.666667	0.666667	1.000000	D	0	37
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_33.GRAASTGAAAST	homer_69.TTGAMCTTTG	0.327575	0.272979	0.272979	0.327575	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_33.GRAASTGAAAST	homer_70.MGGAAGTGAAAC	0.928445	0.785607	0.851074	0.851074	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_33.GRAASTGAAAST	homer_71.HACTTCCGGY	0.597140	0.413405	0.447855	0.537426	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_33.GRAASTGAAAST	homer_72.NRYTTCCGGY	0.573058	0.396732	0.429793	0.515752	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_33.GRAASTGAAAST	homer_73.AWWNTGCTGAGTCAT	0.212554	0.170043	0.212554	0.170043	12	15	12	15	0.800000	1.000000	0.800000	R	-2	51
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_33.GRAASTGAAAST	homer_74.AGGCCTAG	0.687030	0.076337	0.114505	0.171757	12	8	2	18	0.111111	0.166667	0.250000	R	10	37
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_33.GRAASTGAAAST	homer_75.VTTACGTAAYNNNNN	0.437175	0.257162	0.364312	0.291450	12	15	10	17	0.588235	0.833333	0.666667	D	-5	51
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_33.GRAASTGAAAST	homer_76.TGCTGACTCA	0.215253	0.179377	0.179377	0.215253	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_33.GRAASTGAAAST	homer_77.ATTGCGCAAC	0.337521	0.281268	0.281268	0.337521	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_34.CCCCTCCCCCAC	homer_1.ATTTCCTGTN	0.199745	0.166455	0.166455	0.199745	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_34.CCCCTCCCCCAC	homer_2.ACCGGAAGTG	0.390806	0.325671	0.325671	0.390806	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_34.CCCCTCCCCCAC	homer_3.AACCGGAAGT	0.321243	0.267702	0.267702	0.321243	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_34.CCCCTCCCCCAC	homer_4.ACAGGAAGTG	0.424837	0.354031	0.354031	0.424837	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_34.CCCCTCCCCCAC	homer_5.RACCGGAAGT	0.342943	0.285786	0.285786	0.342943	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_34.CCCCTCCCCCAC	homer_6.AGAGGAAGTG	0.493490	0.411241	0.411241	0.493490	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_34.CCCCTCCCCCAC	homer_7.NNAYTTCCTGHN	0.369525	0.312675	0.338731	0.338731	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_34.CCCCTCCCCCAC	homer_8.NRYTTCCGGH	0.419915	0.349929	0.349929	0.419915	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_34.CCCCTCCCCCAC	homer_9.MACAGGAAGT	0.236101	0.196751	0.196751	0.236101	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_34.CCCCTCCCCCAC	homer_10.ACTTCCKGKT	0.390827	0.325689	0.325689	0.390827	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_34.CCCCTCCCCCAC	homer_11.ACVAGGAAGT	0.343524	0.286270	0.286270	0.343524	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_34.CCCCTCCCCCAC	homer_12.YCTTATCTBN	0.192730	0.160608	0.160608	0.192730	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_34.CCCCTCCCCCAC	homer_13.NBWGATAAGR	0.199865	0.138368	0.149899	0.179878	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_34.CCCCTCCCCCAC	homer_14.TGGCAGTTGG	0.347444	0.289537	0.289537	0.347444	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_34.CCCCTCCCCCAC	homer_15.AVCCGGAAGT	0.340541	0.283784	0.283784	0.340541	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_34.CCCCTCCCCCAC	homer_16.ANCAGGAAGT	0.340887	0.284073	0.284073	0.340887	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_34.CCCCTCCCCCAC	homer_17.SAGATAAGRV	0.224475	0.187063	0.187063	0.224475	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_34.CCCCTCCCCCAC	homer_18.TGCTGAGTCA	0.245863	0.204885	0.204885	0.245863	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_34.CCCCTCCCCCAC	homer_19.GCTATTTTTAGC	0.321792	0.084682	0.134080	0.134080	12	12	5	19	0.263158	0.416667	0.416667	R	7	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_34.CCCCTCCCCCAC	homer_20.GGCVGTTR	0.329962	0.219974	0.219974	0.329962	12	8	8	12	0.666667	0.666667	1.000000	R	2	37
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_34.CCCCTCCCCCAC	homer_21.CYTGGCABNSTGCCAR	0.315852	0.236889	0.315852	0.236889	12	16	12	16	0.750000	1.000000	0.750000	D	-4	53
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_34.CCCCTCCCCCAC	homer_22.BBCTTATCTS	0.213117	0.177597	0.177597	0.213117	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_34.CCCCTCCCCCAC	homer_23.VACAGGAAAT	0.199006	0.165838	0.165838	0.199006	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_34.CCCCTCCCCCAC	homer_24.RGKGGGCGKGGC	0.761618	0.644446	0.698149	0.698149	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_34.CCCCTCCCCCAC	homer_25.AGATAASR	0.175401	0.094447	0.102317	0.153476	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_34.CCCCTCCCCCAC	homer_26.YGGCCCCGCCCC	0.829666	0.497800	0.622250	0.622250	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_34.CCCCTCCCCCAC	homer_27.AVCAGGAAGT	0.367422	0.306185	0.306185	0.367422	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_34.CCCCTCCCCCAC	homer_28.RGKGGGCGGAGC	0.738508	0.624891	0.676966	0.676966	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_34.CCCCTCCCCCAC	homer_29.AWWWTGCTGAGTCAT	0.157161	0.125729	0.157161	0.125729	12	15	12	15	0.800000	1.000000	0.800000	D	-3	51
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_34.CCCCTCCCCCAC	homer_30.CAAAGGTCAG	0.269922	0.186869	0.202441	0.242930	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_34.CCCCTCCCCCAC	homer_31.VTGACTCATC	0.289089	0.200138	0.216817	0.260180	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_34.CCCCTCCCCCAC	homer_32.AAAGRGGAAGTG	0.389399	0.389399	0.389399	0.389399	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_34.CCCCTCCCCCAC	homer_33.GRAASTGAAAST	0.507245	0.208865	0.295893	0.295893	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_34.CCCCTCCCCCAC	homer_34.CCCCTCCCCCAC	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_34.CCCCTCCCCCAC	homer_35.GAAAGTGAAAGT	0.378387	0.155806	0.220726	0.220726	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_34.CCCCTCCCCCAC	homer_36.DATGASTCATHN	0.214573	0.181562	0.196692	0.196692	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_34.CCCCTCCCCCAC	homer_37.NDATGASTCAYN	0.200831	0.169934	0.184095	0.184095	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_34.CCCCTCCCCCAC	homer_38.RATGASTCAT	0.239186	0.199322	0.199322	0.239186	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_34.CCCCTCCCCCAC	homer_39.DATGASTCAT	0.218880	0.182400	0.182400	0.218880	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_34.CCCCTCCCCCAC	homer_40.AGTTTCAKTTTC	0.396122	0.163109	0.231071	0.231071	12	12	7	17	0.411765	0.583333	0.583333	D	-5	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_34.CCCCTCCCCCAC	homer_41.NNATGASTCATH	0.199128	0.168493	0.182534	0.182534	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_34.CCCCTCCCCCAC	homer_42.SAAACCACAG	0.376509	0.313758	0.313758	0.376509	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_34.CCCCTCCCCCAC	homer_43.GAAASYGAAASY	0.322134	0.132643	0.187912	0.187912	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_34.CCCCTCCCCCAC	homer_44.AVCAGCTG	0.404567	0.134856	0.168570	0.252855	12	8	5	15	0.333333	0.416667	0.625000	D	7	37
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_34.CCCCTCCCCCAC	homer_45.SGTCACGTGR	0.603391	0.226272	0.301695	0.362034	12	10	6	16	0.375000	0.500000	0.600000	D	6	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_34.CCCCTCCCCCAC	homer_46.NATGASTCABNN	0.264335	0.223668	0.242307	0.242307	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_34.CCCCTCCCCCAC	homer_47.GATGASTCATCN	0.220025	0.186175	0.201689	0.201689	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_34.CCCCTCCCCCAC	homer_48.AGTTTCASTTTC	0.344372	0.141800	0.200884	0.200884	12	12	7	17	0.411765	0.583333	0.583333	D	-5	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_34.CCCCTCCCCCAC	homer_49.RCAGGATGTGGT	0.420977	0.356211	0.385895	0.385895	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_34.CCCCTCCCCCAC	homer_50.GGGGGAATCCCC	0.499981	0.357129	0.416651	0.416651	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_34.CCCCTCCCCCAC	homer_51.GCTGTGGTTW	0.376269	0.260494	0.282202	0.338642	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_34.CCCCTCCCCCAC	homer_52.GGATGACTCATC	0.210667	0.178256	0.193111	0.193111	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_34.CCCCTCCCCCAC	homer_53.NWAACCACADNN	0.443278	0.316627	0.369398	0.369398	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_34.CCCCTCCCCCAC	homer_54.ACCATCTGTT	0.277970	0.231642	0.231642	0.277970	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_34.CCCCTCCCCCAC	homer_55.SVYTTCCNGGAARB	0.242954	0.208247	0.242954	0.208247	12	14	12	14	0.857143	1.000000	0.857143	D	0	49
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_34.CCCCTCCCCCAC	homer_56.SCCTAGCAACAG	0.220325	0.220325	0.220325	0.220325	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_34.CCCCTCCCCCAC	homer_57.AAACCACARM	0.387274	0.268113	0.290456	0.348547	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_34.CCCCTCCCCCAC	homer_58.RTTATGYAAB	0.200104	0.166754	0.166754	0.200104	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_34.CCCCTCCCCCAC	homer_59.NYTTCCWGGAAR	0.246138	0.208271	0.225627	0.225627	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_34.CCCCTCCCCCAC	homer_60.ASWTCCTGBT	0.284837	0.237364	0.237364	0.284837	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_34.CCCCTCCCCCAC	homer_61.DGGGYGKGGC	0.763221	0.528384	0.572416	0.686899	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_34.CCCCTCCCCCAC	homer_62.TWGTCTGV	0.237870	0.158580	0.158580	0.237870	12	8	8	12	0.666667	0.666667	1.000000	R	4	37
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_34.CCCCTCCCCCAC	homer_63.CTGGCAGSCTGCCA	0.267002	0.228859	0.267002	0.228859	12	14	12	14	0.857143	1.000000	0.857143	R	-2	49
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_34.CCCCTCCCCCAC	homer_64.VGGGRATTYCCC	0.421659	0.252996	0.316244	0.316244	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_34.CCCCTCCCCCAC	homer_65.CARRGKBCAAAGTYCA	0.257745	0.193309	0.257745	0.193309	12	16	12	16	0.750000	1.000000	0.750000	R	-3	53
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_34.CCCCTCCCCCAC	homer_66.CCATTGTTNY	0.447539	0.131629	0.186474	0.223769	12	10	5	17	0.294118	0.416667	0.500000	R	7	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_34.CCCCTCCCCCAC	homer_67.CYAAAAATAG	0.572050	0.127122	0.190683	0.228820	12	10	4	18	0.222222	0.333333	0.400000	D	8	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_34.CCCCTCCCCCAC	homer_68.GGGGGGGG	0.903592	0.602395	0.602395	0.903592	12	8	8	12	0.666667	0.666667	1.000000	R	0	37
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_34.CCCCTCCCCCAC	homer_69.TTGAMCTTTG	0.461489	0.173058	0.230745	0.276894	12	10	6	16	0.375000	0.500000	0.600000	D	-4	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_34.CCCCTCCCCCAC	homer_70.MGGAAGTGAAAC	0.530156	0.265078	0.353437	0.353437	12	12	8	16	0.500000	0.666667	0.666667	R	-4	45
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_34.CCCCTCCCCCAC	homer_71.HACTTCCGGY	0.363810	0.303175	0.303175	0.363810	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_34.CCCCTCCCCCAC	homer_72.NRYTTCCGGY	0.307053	0.255878	0.255878	0.307053	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_34.CCCCTCCCCCAC	homer_73.AWWNTGCTGAGTCAT	0.169850	0.135880	0.169850	0.135880	12	15	12	15	0.800000	1.000000	0.800000	D	-3	51
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_34.CCCCTCCCCCAC	homer_74.AGGCCTAG	0.245260	0.163506	0.163506	0.245260	12	8	8	12	0.666667	0.666667	1.000000	R	2	37
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_34.CCCCTCCCCCAC	homer_75.VTTACGTAAYNNNNN	0.133305	0.106644	0.133305	0.106644	12	15	12	15	0.800000	1.000000	0.800000	R	-3	51
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_34.CCCCTCCCCCAC	homer_76.TGCTGACTCA	0.232830	0.194025	0.194025	0.232830	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_34.CCCCTCCCCCAC	homer_77.ATTGCGCAAC	0.246113	0.205094	0.205094	0.246113	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_35.GAAAGTGAAAGT	homer_1.ATTTCCTGTN	0.457475	0.381229	0.381229	0.457475	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_35.GAAAGTGAAAGT	homer_2.ACCGGAAGTG	0.550223	0.380923	0.412667	0.495200	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_35.GAAAGTGAAAGT	homer_3.AACCGGAAGT	0.584475	0.487062	0.487062	0.584475	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_35.GAAAGTGAAAGT	homer_4.ACAGGAAGTG	0.596538	0.412988	0.447403	0.536884	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_35.GAAAGTGAAAGT	homer_5.RACCGGAAGT	0.580234	0.483529	0.483529	0.580234	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_35.GAAAGTGAAAGT	homer_6.AGAGGAAGTG	0.637388	0.441268	0.478041	0.573649	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_35.GAAAGTGAAAGT	homer_7.NNAYTTCCTGHN	0.492800	0.352000	0.410667	0.410667	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_35.GAAAGTGAAAGT	homer_8.NRYTTCCGGH	0.540177	0.373968	0.405132	0.486159	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_35.GAAAGTGAAAGT	homer_9.MACAGGAAGT	0.586343	0.488620	0.488620	0.586343	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_35.GAAAGTGAAAGT	homer_10.ACTTCCKGKT	0.613722	0.511435	0.511435	0.613722	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_35.GAAAGTGAAAGT	homer_11.ACVAGGAAGT	0.599964	0.499970	0.499970	0.599964	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_35.GAAAGTGAAAGT	homer_12.YCTTATCTBN	0.381765	0.264299	0.286324	0.343589	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_35.GAAAGTGAAAGT	homer_13.NBWGATAAGR	0.393464	0.272398	0.295098	0.354118	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_35.GAAAGTGAAAGT	homer_14.TGGCAGTTGG	0.446305	0.371921	0.371921	0.446305	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_35.GAAAGTGAAAGT	homer_15.AVCCGGAAGT	0.561711	0.468092	0.468092	0.561711	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_35.GAAAGTGAAAGT	homer_16.ANCAGGAAGT	0.591391	0.492825	0.492825	0.591391	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_35.GAAAGTGAAAGT	homer_17.SAGATAAGRV	0.303553	0.252961	0.252961	0.303553	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_35.GAAAGTGAAAGT	homer_18.TGCTGAGTCA	0.270231	0.187083	0.202673	0.243208	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_35.GAAAGTGAAAGT	homer_19.GCTATTTTTAGC	0.250264	0.250264	0.250264	0.250264	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_35.GAAAGTGAAAGT	homer_20.GGCVGTTR	0.415520	0.277013	0.277013	0.415520	12	8	8	12	0.666667	0.666667	1.000000	R	1	37
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_35.GAAAGTGAAAGT	homer_21.CYTGGCABNSTGCCAR	0.329414	0.131766	0.219610	0.164707	12	16	8	20	0.400000	0.666667	0.500000	R	4	53
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_35.GAAAGTGAAAGT	homer_22.BBCTTATCTS	0.325353	0.271128	0.271128	0.325353	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_35.GAAAGTGAAAGT	homer_23.VACAGGAAAT	0.528122	0.440101	0.440101	0.528122	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_35.GAAAGTGAAAGT	homer_24.RGKGGGCGKGGC	0.205878	0.123527	0.154408	0.154408	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_35.GAAAGTGAAAGT	homer_25.AGATAASR	0.460950	0.248204	0.268887	0.403331	12	8	7	13	0.538462	0.583333	0.875000	D	5	37
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_35.GAAAGTGAAAGT	homer_26.YGGCCCCGCCCC	0.193688	0.079754	0.112985	0.112985	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_35.GAAAGTGAAAGT	homer_27.AVCAGGAAGT	0.578217	0.481848	0.481848	0.578217	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_35.GAAAGTGAAAGT	homer_28.RGKGGGCGGAGC	0.154515	0.130744	0.141639	0.141639	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_35.GAAAGTGAAAGT	homer_29.AWWWTGCTGAGTCAT	0.318523	0.254819	0.318523	0.254819	12	15	12	15	0.800000	1.000000	0.800000	R	-2	51
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_35.GAAAGTGAAAGT	homer_30.CAAAGGTCAG	0.322821	0.269017	0.269017	0.322821	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_35.GAAAGTGAAAGT	homer_31.VTGACTCATC	0.348386	0.199077	0.232257	0.278708	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_35.GAAAGTGAAAGT	homer_32.AAAGRGGAAGTG	0.700097	0.592390	0.641756	0.641756	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_35.GAAAGTGAAAGT	homer_33.GRAASTGAAAST	0.950731	0.950731	0.950731	0.950731	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_35.GAAAGTGAAAGT	homer_34.CCCCTCCCCCAC	0.378387	0.155806	0.220726	0.220726	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_35.GAAAGTGAAAGT	homer_35.GAAAGTGAAAGT	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_35.GAAAGTGAAAGT	homer_36.DATGASTCATHN	0.286108	0.204363	0.238423	0.238423	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_35.GAAAGTGAAAGT	homer_37.NDATGASTCAYN	0.248726	0.210460	0.227999	0.227999	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_35.GAAAGTGAAAGT	homer_38.RATGASTCAT	0.289538	0.200450	0.217154	0.260585	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_35.GAAAGTGAAAGT	homer_39.DATGASTCAT	0.238874	0.199061	0.199061	0.238874	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_35.GAAAGTGAAAGT	homer_40.AGTTTCAKTTTC	0.941706	0.941706	0.941706	0.941706	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_35.GAAAGTGAAAGT	homer_41.NNATGASTCATH	0.259871	0.185622	0.216559	0.216559	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_35.GAAAGTGAAAGT	homer_42.SAAACCACAG	0.355229	0.296024	0.296024	0.355229	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_35.GAAAGTGAAAGT	homer_43.GAAASYGAAASY	0.959544	0.959544	0.959544	0.959544	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_35.GAAAGTGAAAGT	homer_44.AVCAGCTG	0.291872	0.194581	0.194581	0.291872	12	8	8	12	0.666667	0.666667	1.000000	R	1	37
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_35.GAAAGTGAAAGT	homer_45.SGTCACGTGR	0.276788	0.230657	0.230657	0.276788	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_35.GAAAGTGAAAGT	homer_46.NATGASTCABNN	0.268430	0.191735	0.223691	0.223691	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_35.GAAAGTGAAAGT	homer_47.GATGASTCATCN	0.271339	0.193814	0.226116	0.226116	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_35.GAAAGTGAAAGT	homer_48.AGTTTCASTTTC	0.978351	0.978351	0.978351	0.978351	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_35.GAAAGTGAAAGT	homer_49.RCAGGATGTGGT	0.492793	0.295676	0.369594	0.369594	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_35.GAAAGTGAAAGT	homer_50.GGGGGAATCCCC	0.266365	0.190261	0.221971	0.221971	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_35.GAAAGTGAAAGT	homer_51.GCTGTGGTTW	0.301336	0.251113	0.251113	0.301336	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_35.GAAAGTGAAAGT	homer_52.GGATGACTCATC	0.260451	0.186037	0.217043	0.217043	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_35.GAAAGTGAAAGT	homer_53.NWAACCACADNN	0.227620	0.227620	0.227620	0.227620	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_35.GAAAGTGAAAGT	homer_54.ACCATCTGTT	0.332342	0.276951	0.276951	0.332342	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_35.GAAAGTGAAAGT	homer_55.SVYTTCCNGGAARB	0.644539	0.237462	0.375981	0.322269	12	14	7	19	0.368421	0.583333	0.500000	R	-7	49
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_35.GAAAGTGAAAGT	homer_56.SCCTAGCAACAG	0.614994	0.253233	0.358746	0.358746	12	12	7	17	0.411765	0.583333	0.583333	D	-5	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_35.GAAAGTGAAAGT	homer_57.AAACCACARM	0.373240	0.311033	0.311033	0.373240	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_35.GAAAGTGAAAGT	homer_58.RTTATGYAAB	0.341084	0.284237	0.284237	0.341084	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_35.GAAAGTGAAAGT	homer_59.NYTTCCWGGAAR	0.879198	0.231368	0.366333	0.366333	12	12	5	19	0.263158	0.416667	0.416667	R	-7	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_35.GAAAGTGAAAGT	homer_60.ASWTCCTGBT	0.466668	0.388890	0.388890	0.466668	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_35.GAAAGTGAAAGT	homer_61.DGGGYGKGGC	0.132124	0.091470	0.099093	0.118911	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_35.GAAAGTGAAAGT	homer_62.TWGTCTGV	0.263943	0.142123	0.153967	0.230950	12	8	7	13	0.538462	0.583333	0.875000	R	5	37
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_35.GAAAGTGAAAGT	homer_63.CTGGCAGSCTGCCA	0.371898	0.165288	0.247932	0.212513	12	14	8	18	0.444444	0.666667	0.571429	D	4	49
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_35.GAAAGTGAAAGT	homer_64.VGGGRATTYCCC	0.524117	0.262058	0.349411	0.349411	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_35.GAAAGTGAAAGT	homer_65.CARRGKBCAAAGTYCA	0.462963	0.347222	0.462963	0.347222	12	16	12	16	0.750000	1.000000	0.750000	D	-1	53
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_35.GAAAGTGAAAGT	homer_66.CCATTGTTNY	0.308137	0.256780	0.256780	0.308137	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_35.GAAAGTGAAAGT	homer_67.CYAAAAATAG	0.512019	0.292582	0.341346	0.409615	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_35.GAAAGTGAAAGT	homer_68.GGGGGGGG	0.282330	0.152024	0.164692	0.247038	12	8	7	13	0.538462	0.583333	0.875000	D	-1	37
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_35.GAAAGTGAAAGT	homer_69.TTGAMCTTTG	0.410420	0.342017	0.342017	0.410420	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_35.GAAAGTGAAAGT	homer_70.MGGAAGTGAAAC	0.834676	0.706265	0.765120	0.765120	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_35.GAAAGTGAAAGT	homer_71.HACTTCCGGY	0.531750	0.368135	0.398813	0.478575	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_35.GAAAGTGAAAGT	homer_72.NRYTTCCGGY	0.428101	0.356751	0.356751	0.428101	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_35.GAAAGTGAAAGT	homer_73.AWWNTGCTGAGTCAT	0.288651	0.230921	0.288651	0.230921	12	15	12	15	0.800000	1.000000	0.800000	R	-2	51
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_35.GAAAGTGAAAGT	homer_74.AGGCCTAG	0.584217	0.064913	0.097369	0.146054	12	8	2	18	0.111111	0.166667	0.250000	R	10	37
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_35.GAAAGTGAAAGT	homer_75.VTTACGTAAYNNNNN	0.424223	0.249543	0.353519	0.282815	12	15	10	17	0.588235	0.833333	0.666667	D	-5	51
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_35.GAAAGTGAAAGT	homer_76.TGCTGACTCA	0.230825	0.192354	0.192354	0.230825	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_35.GAAAGTGAAAGT	homer_77.ATTGCGCAAC	0.378411	0.315342	0.315342	0.378411	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_36.DATGASTCATHN	homer_1.ATTTCCTGTN	0.357893	0.167017	0.208771	0.250525	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_36.DATGASTCATHN	homer_2.ACCGGAAGTG	0.162465	0.135388	0.135388	0.162465	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_36.DATGASTCATHN	homer_3.AACCGGAAGT	0.216327	0.123616	0.144218	0.173062	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_36.DATGASTCATHN	homer_4.ACAGGAAGTG	0.539975	0.158816	0.224989	0.269987	12	10	5	17	0.294118	0.416667	0.500000	R	7	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_36.DATGASTCATHN	homer_5.RACCGGAAGT	0.203377	0.116216	0.135585	0.162702	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_36.DATGASTCATHN	homer_6.AGAGGAAGTG	0.284058	0.236715	0.236715	0.284058	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_36.DATGASTCATHN	homer_7.NNAYTTCCTGHN	0.235450	0.199227	0.215829	0.215829	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_36.DATGASTCATHN	homer_8.NRYTTCCGGH	0.209580	0.174650	0.174650	0.209580	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_36.DATGASTCATHN	homer_9.MACAGGAAGT	0.307544	0.143521	0.179401	0.215281	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_36.DATGASTCATHN	homer_10.ACTTCCKGKT	0.173646	0.144705	0.144705	0.173646	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_36.DATGASTCATHN	homer_11.ACVAGGAAGT	0.243022	0.202518	0.202518	0.243022	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_36.DATGASTCATHN	homer_12.YCTTATCTBN	0.391436	0.223678	0.260957	0.313149	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_36.DATGASTCATHN	homer_13.NBWGATAAGR	0.417430	0.238531	0.278286	0.333944	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_36.DATGASTCATHN	homer_14.TGGCAGTTGG	0.269324	0.153899	0.179549	0.215459	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_36.DATGASTCATHN	homer_15.AVCCGGAAGT	0.184295	0.105312	0.122864	0.147436	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_36.DATGASTCATHN	homer_16.ANCAGGAAGT	0.254968	0.212473	0.212473	0.254968	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_36.DATGASTCATHN	homer_17.SAGATAAGRV	0.367875	0.254682	0.275906	0.331087	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_36.DATGASTCATHN	homer_18.TGCTGAGTCA	0.908881	0.757401	0.757401	0.908881	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_36.DATGASTCATHN	homer_19.GCTATTTTTAGC	0.154253	0.130522	0.141399	0.141399	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_36.DATGASTCATHN	homer_20.GGCVGTTR	0.274621	0.147873	0.160196	0.240293	12	8	7	13	0.538462	0.583333	0.875000	D	5	37
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_36.DATGASTCATHN	homer_21.CYTGGCABNSTGCCAR	0.289104	0.216828	0.289104	0.216828	12	16	12	16	0.750000	1.000000	0.750000	D	0	53
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_36.DATGASTCATHN	homer_22.BBCTTATCTS	0.357370	0.247410	0.268028	0.321633	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_36.DATGASTCATHN	homer_23.VACAGGAAAT	0.330689	0.154321	0.192902	0.231482	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_36.DATGASTCATHN	homer_24.RGKGGGCGKGGC	0.304034	0.125191	0.177353	0.177353	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_36.DATGASTCATHN	homer_25.AGATAASR	0.369381	0.246254	0.246254	0.369381	12	8	8	12	0.666667	0.666667	1.000000	R	4	37
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_36.DATGASTCATHN	homer_26.YGGCCCCGCCCC	0.181487	0.153566	0.166363	0.166363	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_36.DATGASTCATHN	homer_27.AVCAGGAAGT	0.188750	0.157292	0.157292	0.188750	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_36.DATGASTCATHN	homer_28.RGKGGGCGGAGC	0.245626	0.122813	0.163751	0.163751	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_36.DATGASTCATHN	homer_29.AWWWTGCTGAGTCAT	0.822384	0.565389	0.753852	0.603081	12	15	11	16	0.687500	0.916667	0.733333	R	1	51
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_36.DATGASTCATHN	homer_30.CAAAGGTCAG	0.293422	0.244519	0.244519	0.293422	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_36.DATGASTCATHN	homer_31.VTGACTCATC	0.987853	0.823211	0.823211	0.987853	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_36.DATGASTCATHN	homer_32.AAAGRGGAAGTG	0.223406	0.223406	0.223406	0.223406	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_36.DATGASTCATHN	homer_33.GRAASTGAAAST	0.292899	0.209214	0.244083	0.244083	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_36.DATGASTCATHN	homer_34.CCCCTCCCCCAC	0.214573	0.181562	0.196692	0.196692	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_36.DATGASTCATHN	homer_35.GAAAGTGAAAGT	0.286108	0.204363	0.238423	0.238423	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_36.DATGASTCATHN	homer_36.DATGASTCATHN	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_36.DATGASTCATHN	homer_37.NDATGASTCAYN	0.976918	0.976918	0.976918	0.976918	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_36.DATGASTCATHN	homer_38.RATGASTCAT	0.996767	0.830639	0.830639	0.996767	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_36.DATGASTCATHN	homer_39.DATGASTCAT	0.995579	0.829650	0.829650	0.995579	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_36.DATGASTCATHN	homer_40.AGTTTCAKTTTC	0.287849	0.205606	0.239874	0.239874	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_36.DATGASTCATHN	homer_41.NNATGASTCATH	0.987139	0.987139	0.987139	0.987139	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_36.DATGASTCATHN	homer_42.SAAACCACAG	0.228559	0.190466	0.190466	0.228559	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_36.DATGASTCATHN	homer_43.GAAASYGAAASY	0.188397	0.134569	0.156997	0.156997	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_36.DATGASTCATHN	homer_44.AVCAGCTG	0.457946	0.246586	0.267135	0.400702	12	8	7	13	0.538462	0.583333	0.875000	D	5	37
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_36.DATGASTCATHN	homer_45.SGTCACGTGR	0.468874	0.267928	0.312583	0.375099	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_36.DATGASTCATHN	homer_46.NATGASTCABNN	0.991230	0.991230	0.991230	0.991230	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_36.DATGASTCATHN	homer_47.GATGASTCATCN	0.996582	0.996582	0.996582	0.996582	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_36.DATGASTCATHN	homer_48.AGTTTCASTTTC	0.328547	0.234676	0.273789	0.273789	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_36.DATGASTCATHN	homer_49.RCAGGATGTGGT	0.383850	0.158056	0.223912	0.223912	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_36.DATGASTCATHN	homer_50.GGGGGAATCCCC	0.332641	0.332641	0.332641	0.332641	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_36.DATGASTCATHN	homer_51.GCTGTGGTTW	0.290483	0.201104	0.217862	0.261435	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_36.DATGASTCATHN	homer_52.GGATGACTCATC	0.983192	0.983192	0.983192	0.983192	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_36.DATGASTCATHN	homer_53.NWAACCACADNN	0.184807	0.184807	0.184807	0.184807	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_36.DATGASTCATHN	homer_54.ACCATCTGTT	0.478286	0.223200	0.279000	0.334800	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_36.DATGASTCATHN	homer_55.SVYTTCCNGGAARB	0.193080	0.102219	0.144810	0.124123	12	14	9	17	0.529412	0.750000	0.642857	D	3	49
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_36.DATGASTCATHN	homer_56.SCCTAGCAACAG	0.171443	0.171443	0.171443	0.171443	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_36.DATGASTCATHN	homer_57.AAACCACARM	0.329468	0.228093	0.247101	0.296521	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_36.DATGASTCATHN	homer_58.RTTATGYAAB	0.350411	0.292009	0.292009	0.350411	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_36.DATGASTCATHN	homer_59.NYTTCCWGGAAR	0.170669	0.102401	0.128002	0.128002	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_36.DATGASTCATHN	homer_60.ASWTCCTGBT	0.247410	0.171284	0.185558	0.222669	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_36.DATGASTCATHN	homer_61.DGGGYGKGGC	0.344860	0.238749	0.258645	0.310374	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_36.DATGASTCATHN	homer_62.TWGTCTGV	0.355467	0.236978	0.236978	0.355467	12	8	8	12	0.666667	0.666667	1.000000	R	2	37
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_36.DATGASTCATHN	homer_63.CTGGCAGSCTGCCA	0.259167	0.190056	0.237570	0.203631	12	14	11	15	0.733333	0.916667	0.785714	D	1	49
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_36.DATGASTCATHN	homer_64.VGGGRATTYCCC	0.173946	0.173946	0.173946	0.173946	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_36.DATGASTCATHN	homer_65.CARRGKBCAAAGTYCA	0.253517	0.190138	0.253517	0.190138	12	16	12	16	0.750000	1.000000	0.750000	D	0	53
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_36.DATGASTCATHN	homer_66.CCATTGTTNY	0.265535	0.183832	0.199151	0.238982	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_36.DATGASTCATHN	homer_67.CYAAAAATAG	0.244872	0.114273	0.142842	0.171410	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_36.DATGASTCATHN	homer_68.GGGGGGGG	0.278373	0.092791	0.115989	0.173983	12	8	5	15	0.333333	0.416667	0.625000	R	7	37
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_36.DATGASTCATHN	homer_69.TTGAMCTTTG	0.371346	0.309455	0.309455	0.371346	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_36.DATGASTCATHN	homer_70.MGGAAGTGAAAC	0.462504	0.277503	0.346878	0.346878	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_36.DATGASTCATHN	homer_71.HACTTCCGGY	0.166687	0.138905	0.138905	0.166687	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_36.DATGASTCATHN	homer_72.NRYTTCCGGY	0.188675	0.157229	0.157229	0.188675	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_36.DATGASTCATHN	homer_73.AWWNTGCTGAGTCAT	0.830516	0.570980	0.761306	0.609045	12	15	11	16	0.687500	0.916667	0.733333	R	1	51
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_36.DATGASTCATHN	homer_74.AGGCCTAG	0.253481	0.168987	0.168987	0.253481	12	8	8	12	0.666667	0.666667	1.000000	D	4	37
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_36.DATGASTCATHN	homer_75.VTTACGTAAYNNNNN	0.374257	0.299406	0.374257	0.299406	12	15	12	15	0.800000	1.000000	0.800000	D	0	51
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_36.DATGASTCATHN	homer_76.TGCTGACTCA	0.712203	0.593502	0.593502	0.712203	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_36.DATGASTCATHN	homer_77.ATTGCGCAAC	0.327521	0.272934	0.272934	0.327521	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_37.NDATGASTCAYN	homer_1.ATTTCCTGTN	0.375871	0.175406	0.219258	0.263110	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_37.NDATGASTCAYN	homer_2.ACCGGAAGTG	0.149224	0.103309	0.111918	0.134302	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_37.NDATGASTCAYN	homer_3.AACCGGAAGT	0.212098	0.121199	0.141399	0.169678	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_37.NDATGASTCAYN	homer_4.ACAGGAAGTG	0.641938	0.142653	0.213979	0.256775	12	10	4	18	0.222222	0.333333	0.400000	R	8	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_37.NDATGASTCAYN	homer_5.RACCGGAAGT	0.190380	0.108788	0.126920	0.152304	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_37.NDATGASTCAYN	homer_6.AGAGGAAGTG	0.290987	0.242490	0.242490	0.290987	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_37.NDATGASTCAYN	homer_7.NNAYTTCCTGHN	0.240643	0.171888	0.200536	0.200536	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_37.NDATGASTCAYN	homer_8.NRYTTCCGGH	0.199814	0.138333	0.149860	0.179832	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_37.NDATGASTCAYN	homer_9.MACAGGAAGT	0.330871	0.154406	0.193008	0.231610	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_37.NDATGASTCAYN	homer_10.ACTTCCKGKT	0.185868	0.154890	0.154890	0.185868	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_37.NDATGASTCAYN	homer_11.ACVAGGAAGT	0.250985	0.209154	0.209154	0.250985	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_37.NDATGASTCAYN	homer_12.YCTTATCTBN	0.376623	0.215213	0.251082	0.301299	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_37.NDATGASTCAYN	homer_13.NBWGATAAGR	0.408880	0.233645	0.272586	0.327104	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_37.NDATGASTCAYN	homer_14.TGGCAGTTGG	0.327320	0.152749	0.190937	0.229124	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_37.NDATGASTCAYN	homer_15.AVCCGGAAGT	0.174405	0.099660	0.116270	0.139524	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_37.NDATGASTCAYN	homer_16.ANCAGGAAGT	0.273312	0.227760	0.227760	0.273312	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_37.NDATGASTCAYN	homer_17.SAGATAAGRV	0.357286	0.247352	0.267964	0.321557	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_37.NDATGASTCAYN	homer_18.TGCTGAGTCA	0.897800	0.748166	0.748166	0.897800	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_37.NDATGASTCAYN	homer_19.GCTATTTTTAGC	0.215934	0.182713	0.197939	0.197939	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_37.NDATGASTCAYN	homer_20.GGCVGTTR	0.392954	0.168409	0.196477	0.294715	12	8	6	14	0.428571	0.500000	0.750000	D	-2	37
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_37.NDATGASTCAYN	homer_21.CYTGGCABNSTGCCAR	0.277476	0.208107	0.277476	0.208107	12	16	12	16	0.750000	1.000000	0.750000	R	-4	53
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_37.NDATGASTCAYN	homer_22.BBCTTATCTS	0.347290	0.240431	0.260467	0.312561	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_37.NDATGASTCAYN	homer_23.VACAGGAAAT	0.336235	0.156910	0.196137	0.235365	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_37.NDATGASTCAYN	homer_24.RGKGGGCGKGGC	0.363760	0.121253	0.181880	0.181880	12	12	6	18	0.333333	0.500000	0.500000	R	6	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_37.NDATGASTCAYN	homer_25.AGATAASR	0.348636	0.232424	0.232424	0.348636	12	8	8	12	0.666667	0.666667	1.000000	D	0	37
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_37.NDATGASTCAYN	homer_26.YGGCCCCGCCCC	0.128057	0.108356	0.117386	0.117386	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_37.NDATGASTCAYN	homer_27.AVCAGGAAGT	0.210778	0.175648	0.175648	0.210778	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_37.NDATGASTCAYN	homer_28.RGKGGGCGGAGC	0.220356	0.110178	0.146904	0.146904	12	12	8	16	0.500000	0.666667	0.666667	D	-4	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_37.NDATGASTCAYN	homer_29.AWWWTGCTGAGTCAT	0.824326	0.566724	0.755632	0.604506	12	15	11	16	0.687500	0.916667	0.733333	D	-4	51
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_37.NDATGASTCAYN	homer_30.CAAAGGTCAG	0.279754	0.233128	0.233128	0.279754	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_37.NDATGASTCAYN	homer_31.VTGACTCATC	0.971997	0.809998	0.809998	0.971997	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_37.NDATGASTCAYN	homer_32.AAAGRGGAAGTG	0.232622	0.232622	0.232622	0.232622	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_37.NDATGASTCAYN	homer_33.GRAASTGAAAST	0.320811	0.192487	0.240608	0.240608	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_37.NDATGASTCAYN	homer_34.CCCCTCCCCCAC	0.200831	0.169934	0.184095	0.184095	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_37.NDATGASTCAYN	homer_35.GAAAGTGAAAGT	0.248726	0.210460	0.227999	0.227999	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_37.NDATGASTCAYN	homer_36.DATGASTCATHN	0.976918	0.976918	0.976918	0.976918	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_37.NDATGASTCAYN	homer_37.NDATGASTCAYN	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_37.NDATGASTCAYN	homer_38.RATGASTCAT	0.984150	0.820125	0.820125	0.984150	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_37.NDATGASTCAYN	homer_39.DATGASTCAT	0.983159	0.819299	0.819299	0.983159	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_37.NDATGASTCAYN	homer_40.AGTTTCAKTTTC	0.306595	0.183957	0.229946	0.229946	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_37.NDATGASTCAYN	homer_41.NNATGASTCATH	0.992104	0.992104	0.992104	0.992104	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_37.NDATGASTCAYN	homer_42.SAAACCACAG	0.236851	0.197376	0.197376	0.236851	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_37.NDATGASTCAYN	homer_43.GAAASYGAAASY	0.209085	0.176918	0.191661	0.191661	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_37.NDATGASTCAYN	homer_44.AVCAGCTG	0.415285	0.223615	0.242249	0.363374	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_37.NDATGASTCAYN	homer_45.SGTCACGTGR	0.557843	0.260327	0.325409	0.390490	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_37.NDATGASTCAYN	homer_46.NATGASTCABNN	0.980592	0.980592	0.980592	0.980592	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_37.NDATGASTCAYN	homer_47.GATGASTCATCN	0.975091	0.975091	0.975091	0.975091	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_37.NDATGASTCAYN	homer_48.AGTTTCASTTTC	0.347120	0.208272	0.260340	0.260340	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_37.NDATGASTCAYN	homer_49.RCAGGATGTGGT	0.405804	0.135268	0.202902	0.202902	12	12	6	18	0.333333	0.500000	0.500000	R	6	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_37.NDATGASTCAYN	homer_50.GGGGGAATCCCC	0.312358	0.312358	0.312358	0.312358	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_37.NDATGASTCAYN	homer_51.GCTGTGGTTW	0.310094	0.214681	0.232571	0.279085	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_37.NDATGASTCAYN	homer_52.GGATGACTCATC	0.957053	0.957053	0.957053	0.957053	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_37.NDATGASTCAYN	homer_53.NWAACCACADNN	0.249564	0.178260	0.207970	0.207970	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_37.NDATGASTCAYN	homer_54.ACCATCTGTT	0.441692	0.206123	0.257654	0.309184	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_37.NDATGASTCAYN	homer_55.SVYTTCCNGGAARB	0.223213	0.099206	0.148808	0.127550	12	14	8	18	0.444444	0.666667	0.571429	D	4	49
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_37.NDATGASTCAYN	homer_56.SCCTAGCAACAG	0.253888	0.214828	0.232731	0.232731	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_37.NDATGASTCAYN	homer_57.AAACCACARM	0.338153	0.234106	0.253614	0.304337	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_37.NDATGASTCAYN	homer_58.RTTATGYAAB	0.423582	0.352985	0.352985	0.423582	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_37.NDATGASTCAYN	homer_59.NYTTCCWGGAAR	0.234639	0.117320	0.156426	0.156426	12	12	8	16	0.500000	0.666667	0.666667	D	4	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_37.NDATGASTCAYN	homer_60.ASWTCCTGBT	0.247370	0.141354	0.164913	0.197896	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_37.NDATGASTCAYN	homer_61.DGGGYGKGGC	0.317916	0.220096	0.238437	0.286124	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_37.NDATGASTCAYN	homer_62.TWGTCTGV	0.351964	0.234643	0.234643	0.351964	12	8	8	12	0.666667	0.666667	1.000000	R	3	37
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_37.NDATGASTCAYN	homer_63.CTGGCAGSCTGCCA	0.233482	0.171220	0.214026	0.183450	12	14	11	15	0.733333	0.916667	0.785714	R	-3	49
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_37.NDATGASTCAYN	homer_64.VGGGRATTYCCC	0.179972	0.179972	0.179972	0.179972	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_37.NDATGASTCAYN	homer_65.CARRGKBCAAAGTYCA	0.247554	0.185665	0.247554	0.185665	12	16	12	16	0.750000	1.000000	0.750000	R	-4	53
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_37.NDATGASTCAYN	homer_66.CCATTGTTNY	0.278149	0.192565	0.208612	0.250334	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_37.NDATGASTCAYN	homer_67.CYAAAAATAG	0.175806	0.146505	0.146505	0.175806	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_37.NDATGASTCAYN	homer_68.GGGGGGGG	0.716259	0.079584	0.119377	0.179065	12	8	2	18	0.111111	0.166667	0.250000	D	-6	37
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_37.NDATGASTCAYN	homer_69.TTGAMCTTTG	0.375271	0.312726	0.312726	0.375271	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_37.NDATGASTCAYN	homer_70.MGGAAGTGAAAC	0.527936	0.263968	0.351957	0.351957	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_37.NDATGASTCAYN	homer_71.HACTTCCGGY	0.152812	0.105793	0.114609	0.137531	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_37.NDATGASTCAYN	homer_72.NRYTTCCGGY	0.174958	0.121125	0.131219	0.157462	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_37.NDATGASTCAYN	homer_73.AWWNTGCTGAGTCAT	0.825529	0.567551	0.756735	0.605388	12	15	11	16	0.687500	0.916667	0.733333	D	-4	51
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_37.NDATGASTCAYN	homer_74.AGGCCTAG	0.224733	0.121010	0.131094	0.196641	12	8	7	13	0.538462	0.583333	0.875000	D	5	37
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_37.NDATGASTCAYN	homer_75.VTTACGTAAYNNNNN	0.426230	0.340984	0.426230	0.340984	12	15	12	15	0.800000	1.000000	0.800000	R	-3	51
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_37.NDATGASTCAYN	homer_76.TGCTGACTCA	0.679171	0.565976	0.565976	0.679171	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_37.NDATGASTCAYN	homer_77.ATTGCGCAAC	0.387212	0.322676	0.322676	0.387212	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_38.RATGASTCAT	homer_1.ATTTCCTGTN	0.199654	0.199654	0.199654	0.199654	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_38.RATGASTCAT	homer_2.ACCGGAAGTG	0.143498	0.117407	0.129148	0.129148	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_38.RATGASTCAT	homer_3.AACCGGAAGT	0.278272	0.119259	0.166963	0.166963	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_38.RATGASTCAT	homer_4.ACAGGAAGTG	0.601224	0.150306	0.240490	0.240490	10	10	4	16	0.250000	0.400000	0.400000	D	-6	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_38.RATGASTCAT	homer_5.RACCGGAAGT	0.248345	0.106434	0.149007	0.149007	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_38.RATGASTCAT	homer_6.AGAGGAAGTG	0.310057	0.253683	0.279052	0.279052	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_38.RATGASTCAT	homer_7.NNAYTTCCTGHN	0.218429	0.182025	0.218429	0.182025	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_38.RATGASTCAT	homer_8.NRYTTCCGGH	0.191627	0.156786	0.172465	0.172465	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_38.RATGASTCAT	homer_9.MACAGGAAGT	0.174013	0.174013	0.174013	0.174013	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_38.RATGASTCAT	homer_10.ACTTCCKGKT	0.197858	0.197858	0.197858	0.197858	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_38.RATGASTCAT	homer_11.ACVAGGAAGT	0.258741	0.258741	0.258741	0.258741	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_38.RATGASTCAT	homer_12.YCTTATCTBN	0.430399	0.231753	0.301279	0.301279	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_38.RATGASTCAT	homer_13.NBWGATAAGR	0.457704	0.246456	0.320393	0.320393	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_38.RATGASTCAT	homer_14.TGGCAGTTGG	0.303953	0.163667	0.212767	0.212767	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_38.RATGASTCAT	homer_15.AVCCGGAAGT	0.243401	0.104315	0.146040	0.146040	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_38.RATGASTCAT	homer_16.ANCAGGAAGT	0.273981	0.273981	0.273981	0.273981	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_38.RATGASTCAT	homer_17.SAGATAAGRV	0.406982	0.271321	0.325586	0.325586	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_38.RATGASTCAT	homer_18.TGCTGAGTCA	0.929327	0.760358	0.836394	0.836394	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_38.RATGASTCAT	homer_19.GCTATTTTTAGC	0.156391	0.130326	0.156391	0.130326	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_38.RATGASTCAT	homer_20.GGCVGTTR	0.299177	0.149589	0.179506	0.224383	10	8	6	12	0.500000	0.600000	0.750000	R	-2	33
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_38.RATGASTCAT	homer_21.CYTGGCABNSTGCCAR	0.338609	0.211631	0.338609	0.211631	10	16	10	16	0.625000	1.000000	0.625000	D	0	49
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_38.RATGASTCAT	homer_22.BBCTTATCTS	0.397996	0.265331	0.318397	0.318397	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_38.RATGASTCAT	homer_23.VACAGGAAAT	0.163438	0.163438	0.163438	0.163438	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_38.RATGASTCAT	homer_24.RGKGGGCGKGGC	0.326852	0.122570	0.196111	0.163426	10	12	6	16	0.375000	0.600000	0.500000	D	-6	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_38.RATGASTCAT	homer_25.AGATAASR	0.421594	0.268287	0.295116	0.368895	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_38.RATGASTCAT	homer_26.YGGCCCCGCCCC	0.180652	0.150543	0.180652	0.150543	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_38.RATGASTCAT	homer_27.AVCAGGAAGT	0.213949	0.213949	0.213949	0.213949	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_38.RATGASTCAT	homer_28.RGKGGGCGGAGC	0.270930	0.126434	0.189651	0.158042	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_38.RATGASTCAT	homer_29.AWWWTGCTGAGTCAT	0.860164	0.573443	0.860164	0.573443	10	15	10	15	0.666667	1.000000	0.666667	D	-5	47
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_38.RATGASTCAT	homer_30.CAAAGGTCAG	0.278509	0.278509	0.278509	0.278509	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_38.RATGASTCAT	homer_31.VTGACTCATC	0.987228	0.987228	0.987228	0.987228	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_38.RATGASTCAT	homer_32.AAAGRGGAAGTG	0.247857	0.206548	0.247857	0.206548	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_38.RATGASTCAT	homer_33.GRAASTGAAAST	0.299624	0.207432	0.269661	0.224718	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_38.RATGASTCAT	homer_34.CCCCTCCCCCAC	0.239186	0.199322	0.239186	0.199322	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_38.RATGASTCAT	homer_35.GAAAGTGAAAGT	0.289538	0.200450	0.260585	0.217154	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_38.RATGASTCAT	homer_36.DATGASTCATHN	0.996767	0.830639	0.996767	0.830639	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_38.RATGASTCAT	homer_37.NDATGASTCAYN	0.984150	0.820125	0.984150	0.820125	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_38.RATGASTCAT	homer_38.RATGASTCAT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_38.RATGASTCAT	homer_39.DATGASTCAT	0.995936	0.995936	0.995936	0.995936	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_38.RATGASTCAT	homer_40.AGTTTCAKTTTC	0.294365	0.203791	0.264928	0.220773	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_38.RATGASTCAT	homer_41.NNATGASTCATH	0.991606	0.826338	0.991606	0.826338	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_38.RATGASTCAT	homer_42.SAAACCACAG	0.213587	0.174753	0.192228	0.192228	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_38.RATGASTCAT	homer_43.GAAASYGAAASY	0.169244	0.141037	0.169244	0.141037	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_38.RATGASTCAT	homer_44.AVCAGCTG	0.517659	0.258830	0.310596	0.388244	10	8	6	12	0.500000	0.600000	0.750000	R	-2	33
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_38.RATGASTCAT	homer_45.SGTCACGTGR	0.513716	0.276616	0.359601	0.359601	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_38.RATGASTCAT	homer_46.NATGASTCABNN	0.995176	0.829314	0.995176	0.829314	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_38.RATGASTCAT	homer_47.GATGASTCATCN	0.996616	0.830513	0.996616	0.830513	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_38.RATGASTCAT	homer_48.AGTTTCASTTTC	0.333661	0.230996	0.300295	0.250245	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_38.RATGASTCAT	homer_49.RCAGGATGTGGT	0.395954	0.148483	0.237573	0.197977	10	12	6	16	0.375000	0.600000	0.500000	D	-6	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_38.RATGASTCAT	homer_50.GGGGGAATCCCC	0.322548	0.268790	0.322548	0.268790	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_38.RATGASTCAT	homer_51.GCTGTGGTTW	0.281327	0.187551	0.225062	0.225062	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_38.RATGASTCAT	homer_52.GGATGACTCATC	0.990347	0.825289	0.990347	0.825289	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_38.RATGASTCAT	homer_53.NWAACCACADNN	0.202594	0.168828	0.202594	0.168828	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_38.RATGASTCAT	homer_54.ACCATCTGTT	0.565601	0.242400	0.339361	0.339361	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_38.RATGASTCAT	homer_55.SVYTTCCNGGAARB	0.186481	0.093240	0.149184	0.106560	10	14	8	16	0.500000	0.800000	0.571429	R	-6	45
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_38.RATGASTCAT	homer_56.SCCTAGCAACAG	0.202206	0.168505	0.202206	0.168505	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_38.RATGASTCAT	homer_57.AAACCACARM	0.315325	0.210216	0.252260	0.252260	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_38.RATGASTCAT	homer_58.RTTATGYAAB	0.374730	0.374730	0.374730	0.374730	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_38.RATGASTCAT	homer_59.NYTTCCWGGAAR	0.216192	0.100889	0.151334	0.126112	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_38.RATGASTCAT	homer_60.ASWTCCTGBT	0.224300	0.149534	0.179440	0.179440	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_38.RATGASTCAT	homer_61.DGGGYGKGGC	0.362658	0.241772	0.290126	0.290126	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_38.RATGASTCAT	homer_62.TWGTCTGV	0.370029	0.296023	0.296023	0.370029	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_38.RATGASTCAT	homer_63.CTGGCAGSCTGCCA	0.257113	0.183652	0.257113	0.183652	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_38.RATGASTCAT	homer_64.VGGGRATTYCCC	0.234284	0.133876	0.187427	0.156189	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_38.RATGASTCAT	homer_65.CARRGKBCAAAGTYCA	0.313039	0.195649	0.313039	0.195649	10	16	10	16	0.625000	1.000000	0.625000	D	0	49
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_38.RATGASTCAT	homer_66.CCATTGTTNY	0.286003	0.190669	0.228803	0.228803	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_38.RATGASTCAT	homer_67.CYAAAAATAG	0.330741	0.110247	0.165370	0.165370	10	10	5	15	0.333333	0.500000	0.500000	D	5	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_38.RATGASTCAT	homer_68.GGGGGGGG	0.271052	0.077444	0.108421	0.135526	10	8	4	14	0.285714	0.400000	0.500000	D	-4	33
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_38.RATGASTCAT	homer_69.TTGAMCTTTG	0.358101	0.358101	0.358101	0.358101	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_38.RATGASTCAT	homer_70.MGGAAGTGAAAC	0.491835	0.281048	0.393468	0.327890	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_38.RATGASTCAT	homer_71.HACTTCCGGY	0.147715	0.120858	0.132943	0.132943	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_38.RATGASTCAT	homer_72.NRYTTCCGGY	0.170070	0.139149	0.153063	0.153063	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_38.RATGASTCAT	homer_73.AWWNTGCTGAGTCAT	0.871621	0.581081	0.871621	0.581081	10	15	10	15	0.666667	1.000000	0.666667	D	-5	47
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_38.RATGASTCAT	homer_74.AGGCCTAG	0.263041	0.167390	0.184129	0.230161	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_38.RATGASTCAT	homer_75.VTTACGTAAYNNNNN	0.405844	0.270563	0.405844	0.270563	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_38.RATGASTCAT	homer_76.TGCTGACTCA	0.764662	0.625632	0.688196	0.688196	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_38.RATGASTCAT	homer_77.ATTGCGCAAC	0.357899	0.357899	0.357899	0.357899	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_39.DATGASTCAT	homer_1.ATTTCCTGTN	0.189635	0.189635	0.189635	0.189635	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_39.DATGASTCAT	homer_2.ACCGGAAGTG	0.144287	0.118053	0.129858	0.129858	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_39.DATGASTCAT	homer_3.AACCGGAAGT	0.208641	0.112345	0.146049	0.146049	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_39.DATGASTCAT	homer_4.ACAGGAAGTG	0.586321	0.146580	0.234529	0.234529	10	10	4	16	0.250000	0.400000	0.400000	D	-6	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_39.DATGASTCAT	homer_5.RACCGGAAGT	0.191543	0.103139	0.134080	0.134080	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_39.DATGASTCAT	homer_6.AGAGGAAGTG	0.298590	0.244301	0.268731	0.268731	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_39.DATGASTCAT	homer_7.NNAYTTCCTGHN	0.217641	0.181367	0.217641	0.181367	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_39.DATGASTCAT	homer_8.NRYTTCCGGH	0.189389	0.154955	0.170450	0.170450	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_39.DATGASTCAT	homer_9.MACAGGAAGT	0.160780	0.160780	0.160780	0.160780	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_39.DATGASTCAT	homer_10.ACTTCCKGKT	0.184002	0.184002	0.184002	0.184002	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_39.DATGASTCAT	homer_11.ACVAGGAAGT	0.250208	0.250208	0.250208	0.250208	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_39.DATGASTCAT	homer_12.YCTTATCTBN	0.412863	0.222311	0.289004	0.289004	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_39.DATGASTCAT	homer_13.NBWGATAAGR	0.435987	0.234762	0.305191	0.305191	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_39.DATGASTCAT	homer_14.TGGCAGTTGG	0.159232	0.159232	0.159232	0.159232	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_39.DATGASTCAT	homer_15.AVCCGGAAGT	0.222640	0.095417	0.133584	0.133584	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_39.DATGASTCAT	homer_16.ANCAGGAAGT	0.266596	0.266596	0.266596	0.266596	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_39.DATGASTCAT	homer_17.SAGATAAGRV	0.393174	0.262116	0.314539	0.314539	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_39.DATGASTCAT	homer_18.TGCTGAGTCA	0.918141	0.751206	0.826327	0.826327	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_39.DATGASTCAT	homer_19.GCTATTTTTAGC	0.178781	0.148985	0.178781	0.148985	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_39.DATGASTCAT	homer_20.GGCVGTTR	0.284557	0.142279	0.170734	0.213418	10	8	6	12	0.500000	0.600000	0.750000	R	-2	33
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_39.DATGASTCAT	homer_21.CYTGGCABNSTGCCAR	0.341714	0.213571	0.341714	0.213571	10	16	10	16	0.625000	1.000000	0.625000	D	-6	49
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_39.DATGASTCAT	homer_22.BBCTTATCTS	0.382756	0.255171	0.306205	0.306205	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_39.DATGASTCAT	homer_23.VACAGGAAAT	0.474082	0.158027	0.237041	0.237041	10	10	5	15	0.333333	0.500000	0.500000	D	5	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_39.DATGASTCAT	homer_24.RGKGGGCGKGGC	0.304935	0.114351	0.182961	0.152467	10	12	6	16	0.375000	0.600000	0.500000	D	-6	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_39.DATGASTCAT	homer_25.AGATAASR	0.390503	0.248502	0.273352	0.341690	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_39.DATGASTCAT	homer_26.YGGCCCCGCCCC	0.155927	0.129939	0.155927	0.129939	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_39.DATGASTCAT	homer_27.AVCAGGAAGT	0.204108	0.204108	0.204108	0.204108	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_39.DATGASTCAT	homer_28.RGKGGGCGGAGC	0.261260	0.121921	0.182882	0.152402	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_39.DATGASTCAT	homer_29.AWWWTGCTGAGTCAT	0.854353	0.569569	0.854353	0.569569	10	15	10	15	0.666667	1.000000	0.666667	D	-5	47
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_39.DATGASTCAT	homer_30.CAAAGGTCAG	0.291166	0.291166	0.291166	0.291166	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_39.DATGASTCAT	homer_31.VTGACTCATC	0.985011	0.985011	0.985011	0.985011	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_39.DATGASTCAT	homer_32.AAAGRGGAAGTG	0.243862	0.203218	0.243862	0.203218	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_39.DATGASTCAT	homer_33.GRAASTGAAAST	0.292404	0.202434	0.263164	0.219303	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_39.DATGASTCAT	homer_34.CCCCTCCCCCAC	0.218880	0.182400	0.218880	0.182400	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_39.DATGASTCAT	homer_35.GAAAGTGAAAGT	0.238874	0.199061	0.238874	0.199061	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_39.DATGASTCAT	homer_36.DATGASTCATHN	0.995579	0.829650	0.995579	0.829650	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_39.DATGASTCAT	homer_37.NDATGASTCAYN	0.983159	0.819299	0.983159	0.819299	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_39.DATGASTCAT	homer_38.RATGASTCAT	0.995936	0.995936	0.995936	0.995936	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_39.DATGASTCAT	homer_39.DATGASTCAT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_39.DATGASTCAT	homer_40.AGTTTCAKTTTC	0.289870	0.200679	0.260883	0.217402	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_39.DATGASTCAT	homer_41.NNATGASTCATH	0.989860	0.824884	0.989860	0.824884	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_39.DATGASTCAT	homer_42.SAAACCACAG	0.222365	0.181935	0.200129	0.200129	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_39.DATGASTCAT	homer_43.GAAASYGAAASY	0.192022	0.160019	0.192022	0.160019	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_39.DATGASTCAT	homer_44.AVCAGCTG	0.489455	0.244728	0.293673	0.367091	10	8	6	12	0.500000	0.600000	0.750000	R	-2	33
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_39.DATGASTCAT	homer_45.SGTCACGTGR	0.486611	0.262021	0.340627	0.340627	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_39.DATGASTCAT	homer_46.NATGASTCABNN	0.991880	0.826566	0.991880	0.826566	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_39.DATGASTCAT	homer_47.GATGASTCATCN	0.993491	0.827909	0.993491	0.827909	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_39.DATGASTCAT	homer_48.AGTTTCASTTTC	0.326556	0.226077	0.293900	0.244917	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_39.DATGASTCAT	homer_49.RCAGGATGTGGT	0.392663	0.147249	0.235598	0.196332	10	12	6	16	0.375000	0.600000	0.500000	D	-6	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_39.DATGASTCAT	homer_50.GGGGGAATCCCC	0.295408	0.246174	0.295408	0.246174	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_39.DATGASTCAT	homer_51.GCTGTGGTTW	0.289107	0.192738	0.231286	0.231286	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_39.DATGASTCAT	homer_52.GGATGACTCATC	0.985887	0.821573	0.985887	0.821573	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_39.DATGASTCAT	homer_53.NWAACCACADNN	0.244393	0.169195	0.219954	0.183295	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_39.DATGASTCAT	homer_54.ACCATCTGTT	0.528734	0.226600	0.317241	0.317241	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_39.DATGASTCAT	homer_55.SVYTTCCNGGAARB	0.193517	0.096758	0.154813	0.110581	10	14	8	16	0.500000	0.800000	0.571429	R	-6	45
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_39.DATGASTCAT	homer_56.SCCTAGCAACAG	0.190230	0.158525	0.190230	0.158525	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_39.DATGASTCAT	homer_57.AAACCACARM	0.320124	0.213416	0.256099	0.256099	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_39.DATGASTCAT	homer_58.RTTATGYAAB	0.361850	0.361850	0.361850	0.361850	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_39.DATGASTCAT	homer_59.NYTTCCWGGAAR	0.224953	0.104978	0.157467	0.131223	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_39.DATGASTCAT	homer_60.ASWTCCTGBT	0.229747	0.153165	0.183798	0.183798	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_39.DATGASTCAT	homer_61.DGGGYGKGGC	0.329699	0.219799	0.263759	0.263759	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_39.DATGASTCAT	homer_62.TWGTCTGV	0.365904	0.292723	0.292723	0.365904	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_39.DATGASTCAT	homer_63.CTGGCAGSCTGCCA	0.275300	0.196643	0.275300	0.196643	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_39.DATGASTCAT	homer_64.VGGGRATTYCCC	0.208689	0.119251	0.166951	0.139126	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_39.DATGASTCAT	homer_65.CARRGKBCAAAGTYCA	0.326079	0.203799	0.326079	0.203799	10	16	10	16	0.625000	1.000000	0.625000	D	0	49
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_39.DATGASTCAT	homer_66.CCATTGTTNY	0.282454	0.188302	0.225963	0.225963	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_39.DATGASTCAT	homer_67.CYAAAAATAG	0.305023	0.130724	0.183014	0.183014	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_39.DATGASTCAT	homer_68.GGGGGGGG	0.135535	0.067768	0.081321	0.101651	10	8	6	12	0.500000	0.600000	0.750000	D	-2	33
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_39.DATGASTCAT	homer_69.TTGAMCTTTG	0.373224	0.373224	0.373224	0.373224	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_39.DATGASTCAT	homer_70.MGGAAGTGAAAC	0.476478	0.272273	0.381182	0.317652	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_39.DATGASTCAT	homer_71.HACTTCCGGY	0.149285	0.122142	0.134357	0.134357	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_39.DATGASTCAT	homer_72.NRYTTCCGGY	0.170921	0.139845	0.153829	0.153829	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_39.DATGASTCAT	homer_73.AWWNTGCTGAGTCAT	0.861384	0.574256	0.861384	0.574256	10	15	10	15	0.666667	1.000000	0.666667	D	-5	47
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_39.DATGASTCAT	homer_74.AGGCCTAG	0.261583	0.166462	0.183108	0.228885	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_39.DATGASTCAT	homer_75.VTTACGTAAYNNNNN	0.400675	0.267117	0.400675	0.267117	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_39.DATGASTCAT	homer_76.TGCTGACTCA	0.738198	0.603980	0.664378	0.664378	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_39.DATGASTCAT	homer_77.ATTGCGCAAC	0.350621	0.350621	0.350621	0.350621	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_40.AGTTTCAKTTTC	homer_1.ATTTCCTGTN	0.498037	0.415030	0.415030	0.498037	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_40.AGTTTCAKTTTC	homer_2.ACCGGAAGTG	0.551003	0.381463	0.413252	0.495902	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_40.AGTTTCAKTTTC	homer_3.AACCGGAAGT	0.568919	0.474099	0.474099	0.568919	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_40.AGTTTCAKTTTC	homer_4.ACAGGAAGTG	0.561337	0.388618	0.421003	0.505204	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_40.AGTTTCAKTTTC	homer_5.RACCGGAAGT	0.563620	0.469683	0.469683	0.563620	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_40.AGTTTCAKTTTC	homer_6.AGAGGAAGTG	0.565059	0.391195	0.423794	0.508553	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_40.AGTTTCAKTTTC	homer_7.NNAYTTCCTGHN	0.473919	0.401009	0.434426	0.434426	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_40.AGTTTCAKTTTC	homer_8.NRYTTCCGGH	0.477275	0.397729	0.397729	0.477275	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_40.AGTTTCAKTTTC	homer_9.MACAGGAAGT	0.560073	0.466728	0.466728	0.560073	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_40.AGTTTCAKTTTC	homer_10.ACTTCCKGKT	0.582915	0.485762	0.485762	0.582915	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_40.AGTTTCAKTTTC	homer_11.ACVAGGAAGT	0.559317	0.466098	0.466098	0.559317	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_40.AGTTTCAKTTTC	homer_12.YCTTATCTBN	0.323391	0.223886	0.242543	0.291052	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_40.AGTTTCAKTTTC	homer_13.NBWGATAAGR	0.333322	0.230761	0.249992	0.299990	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_40.AGTTTCAKTTTC	homer_14.TGGCAGTTGG	0.448062	0.373385	0.373385	0.448062	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_40.AGTTTCAKTTTC	homer_15.AVCCGGAAGT	0.549298	0.457748	0.457748	0.549298	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_40.AGTTTCAKTTTC	homer_16.ANCAGGAAGT	0.558958	0.465798	0.465798	0.558958	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_40.AGTTTCAKTTTC	homer_17.SAGATAAGRV	0.387924	0.221671	0.258616	0.310339	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_40.AGTTTCAKTTTC	homer_18.TGCTGAGTCA	0.201314	0.167762	0.167762	0.201314	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_40.AGTTTCAKTTTC	homer_19.GCTATTTTTAGC	0.438258	0.262955	0.328693	0.328693	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_40.AGTTTCAKTTTC	homer_20.GGCVGTTR	0.453986	0.302657	0.302657	0.453986	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_40.AGTTTCAKTTTC	homer_21.CYTGGCABNSTGCCAR	0.307377	0.122951	0.204918	0.153688	12	16	8	20	0.400000	0.666667	0.500000	D	-8	53
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_40.AGTTTCAKTTTC	homer_22.BBCTTATCTS	0.390826	0.223329	0.260551	0.312661	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_40.AGTTTCAKTTTC	homer_23.VACAGGAAAT	0.538537	0.448781	0.448781	0.538537	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_40.AGTTTCAKTTTC	homer_24.RGKGGGCGKGGC	0.112524	0.067514	0.084393	0.084393	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_40.AGTTTCAKTTTC	homer_25.AGATAASR	0.407904	0.219641	0.237944	0.356916	12	8	7	13	0.538462	0.583333	0.875000	R	5	37
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_40.AGTTTCAKTTTC	homer_26.YGGCCCCGCCCC	0.285431	0.117530	0.166501	0.166501	12	12	7	17	0.411765	0.583333	0.583333	D	5	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_40.AGTTTCAKTTTC	homer_27.AVCAGGAAGT	0.557660	0.464717	0.464717	0.557660	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_40.AGTTTCAKTTTC	homer_28.RGKGGGCGGAGC	0.153554	0.129930	0.140757	0.140757	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_40.AGTTTCAKTTTC	homer_29.AWWWTGCTGAGTCAT	0.260578	0.208463	0.260578	0.208463	12	15	12	15	0.800000	1.000000	0.800000	D	-1	51
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_40.AGTTTCAKTTTC	homer_30.CAAAGGTCAG	0.272224	0.226853	0.226853	0.272224	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_40.AGTTTCAKTTTC	homer_31.VTGACTCATC	0.360026	0.205729	0.240017	0.288021	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_40.AGTTTCAKTTTC	homer_32.AAAGRGGAAGTG	0.681663	0.576792	0.624858	0.624858	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_40.AGTTTCAKTTTC	homer_33.GRAASTGAAAST	0.951732	0.951732	0.951732	0.951732	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_40.AGTTTCAKTTTC	homer_34.CCCCTCCCCCAC	0.396122	0.163109	0.231071	0.231071	12	12	7	17	0.411765	0.583333	0.583333	D	5	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_40.AGTTTCAKTTTC	homer_35.GAAAGTGAAAGT	0.941706	0.941706	0.941706	0.941706	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_40.AGTTTCAKTTTC	homer_36.DATGASTCATHN	0.287849	0.205606	0.239874	0.239874	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_40.AGTTTCAKTTTC	homer_37.NDATGASTCAYN	0.306595	0.183957	0.229946	0.229946	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_40.AGTTTCAKTTTC	homer_38.RATGASTCAT	0.294365	0.203791	0.220773	0.264928	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_40.AGTTTCAKTTTC	homer_39.DATGASTCAT	0.289870	0.200679	0.217402	0.260883	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_40.AGTTTCAKTTTC	homer_40.AGTTTCAKTTTC	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_40.AGTTTCAKTTTC	homer_41.NNATGASTCATH	0.256332	0.183094	0.213610	0.213610	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_40.AGTTTCAKTTTC	homer_42.SAAACCACAG	0.418586	0.348822	0.348822	0.418586	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_40.AGTTTCAKTTTC	homer_43.GAAASYGAAASY	0.951560	0.951560	0.951560	0.951560	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_40.AGTTTCAKTTTC	homer_44.AVCAGCTG	0.251675	0.167783	0.167783	0.251675	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_40.AGTTTCAKTTTC	homer_45.SGTCACGTGR	0.281475	0.160843	0.187650	0.225180	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_40.AGTTTCAKTTTC	homer_46.NATGASTCABNN	0.265515	0.189654	0.221262	0.221262	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_40.AGTTTCAKTTTC	homer_47.GATGASTCATCN	0.276089	0.197207	0.230074	0.230074	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_40.AGTTTCAKTTTC	homer_48.AGTTTCASTTTC	0.960518	0.960518	0.960518	0.960518	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_40.AGTTTCAKTTTC	homer_49.RCAGGATGTGGT	0.429806	0.257883	0.322354	0.322354	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_40.AGTTTCAKTTTC	homer_50.GGGGGAATCCCC	0.276818	0.197727	0.230682	0.230682	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_40.AGTTTCAKTTTC	homer_51.GCTGTGGTTW	0.385780	0.321484	0.321484	0.385780	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_40.AGTTTCAKTTTC	homer_52.GGATGACTCATC	0.267041	0.190744	0.222534	0.222534	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_40.AGTTTCAKTTTC	homer_53.NWAACCACADNN	0.301834	0.301834	0.301834	0.301834	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_40.AGTTTCAKTTTC	homer_54.ACCATCTGTT	0.283104	0.235920	0.235920	0.283104	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_40.AGTTTCAKTTTC	homer_55.SVYTTCCNGGAARB	0.762950	0.281087	0.445054	0.381475	12	14	7	19	0.368421	0.583333	0.500000	D	5	49
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_40.AGTTTCAKTTTC	homer_56.SCCTAGCAACAG	0.380665	0.322101	0.348943	0.348943	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_40.AGTTTCAKTTTC	homer_57.AAACCACARM	0.452795	0.377329	0.377329	0.452795	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_40.AGTTTCAKTTTC	homer_58.RTTATGYAAB	0.349097	0.290914	0.290914	0.349097	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_40.AGTTTCAKTTTC	homer_59.NYTTCCWGGAAR	0.795506	0.265169	0.397753	0.397753	12	12	6	18	0.333333	0.500000	0.500000	D	6	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_40.AGTTTCAKTTTC	homer_60.ASWTCCTGBT	0.497810	0.414841	0.414841	0.497810	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_40.AGTTTCAKTTTC	homer_61.DGGGYGKGGC	0.252511	0.094692	0.126255	0.151506	12	10	6	16	0.375000	0.500000	0.600000	D	-4	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_40.AGTTTCAKTTTC	homer_62.TWGTCTGV	0.373883	0.201322	0.218098	0.327148	12	8	7	13	0.538462	0.583333	0.875000	D	-1	37
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_40.AGTTTCAKTTTC	homer_63.CTGGCAGSCTGCCA	0.280440	0.124640	0.186960	0.160252	12	14	8	18	0.444444	0.666667	0.571429	R	-6	49
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_40.AGTTTCAKTTTC	homer_64.VGGGRATTYCCC	0.509568	0.254784	0.339712	0.339712	12	12	8	16	0.500000	0.666667	0.666667	D	-4	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_40.AGTTTCAKTTTC	homer_65.CARRGKBCAAAGTYCA	0.414316	0.310737	0.414316	0.310737	12	16	12	16	0.750000	1.000000	0.750000	R	-3	53
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_40.AGTTTCAKTTTC	homer_66.CCATTGTTNY	0.507829	0.236987	0.296233	0.355480	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_40.AGTTTCAKTTTC	homer_67.CYAAAAATAG	0.553790	0.316451	0.369193	0.443032	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_40.AGTTTCAKTTTC	homer_68.GGGGGGGG	0.252504	0.135963	0.147294	0.220941	12	8	7	13	0.538462	0.583333	0.875000	R	5	37
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_40.AGTTTCAKTTTC	homer_69.TTGAMCTTTG	0.349968	0.291640	0.291640	0.349968	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_40.AGTTTCAKTTTC	homer_70.MGGAAGTGAAAC	0.870272	0.736384	0.797749	0.797749	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_40.AGTTTCAKTTTC	homer_71.HACTTCCGGY	0.557772	0.386150	0.418329	0.501994	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_40.AGTTTCAKTTTC	homer_72.NRYTTCCGGY	0.484670	0.403892	0.403892	0.484670	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_40.AGTTTCAKTTTC	homer_73.AWWNTGCTGAGTCAT	0.237627	0.190102	0.237627	0.190102	12	15	12	15	0.800000	1.000000	0.800000	D	-1	51
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_40.AGTTTCAKTTTC	homer_74.AGGCCTAG	0.924262	0.102696	0.154044	0.231066	12	8	2	18	0.111111	0.166667	0.250000	D	-6	37
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_40.AGTTTCAKTTTC	homer_75.VTTACGTAAYNNNNN	0.451610	0.265653	0.376342	0.301073	12	15	10	17	0.588235	0.833333	0.666667	R	2	51
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_40.AGTTTCAKTTTC	homer_76.TGCTGACTCA	0.193758	0.161465	0.161465	0.193758	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_40.AGTTTCAKTTTC	homer_77.ATTGCGCAAC	0.349368	0.291140	0.291140	0.349368	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_41.NNATGASTCATH	homer_1.ATTTCCTGTN	0.371509	0.173371	0.216713	0.260056	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_41.NNATGASTCATH	homer_2.ACCGGAAGTG	0.143556	0.119630	0.119630	0.143556	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_41.NNATGASTCATH	homer_3.AACCGGAAGT	0.230877	0.131930	0.153918	0.184702	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_41.NNATGASTCATH	homer_4.ACAGGAAGTG	0.511388	0.150408	0.213078	0.255694	12	10	5	17	0.294118	0.416667	0.500000	D	-5	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_41.NNATGASTCATH	homer_5.RACCGGAAGT	0.212997	0.121713	0.141998	0.170398	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_41.NNATGASTCATH	homer_6.AGAGGAAGTG	0.296617	0.247181	0.247181	0.296617	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_41.NNATGASTCATH	homer_7.NNAYTTCCTGHN	0.216140	0.182888	0.198128	0.198128	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_41.NNATGASTCATH	homer_8.NRYTTCCGGH	0.183735	0.153113	0.153113	0.183735	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_41.NNATGASTCATH	homer_9.MACAGGAAGT	0.178712	0.148926	0.148926	0.178712	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_41.NNATGASTCATH	homer_10.ACTTCCKGKT	0.195362	0.162802	0.162802	0.195362	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_41.NNATGASTCATH	homer_11.ACVAGGAAGT	0.264312	0.220260	0.220260	0.264312	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_41.NNATGASTCATH	homer_12.YCTTATCTBN	0.399776	0.228443	0.266517	0.319821	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_41.NNATGASTCATH	homer_13.NBWGATAAGR	0.432191	0.246966	0.288127	0.345752	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_41.NNATGASTCATH	homer_14.TGGCAGTTGG	0.318676	0.148715	0.185894	0.223073	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_41.NNATGASTCATH	homer_15.AVCCGGAAGT	0.197974	0.113128	0.131983	0.158379	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_41.NNATGASTCATH	homer_16.ANCAGGAAGT	0.278719	0.232266	0.232266	0.278719	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_41.NNATGASTCATH	homer_17.SAGATAAGRV	0.381444	0.264077	0.286083	0.343300	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_41.NNATGASTCATH	homer_18.TGCTGAGTCA	0.894236	0.745197	0.745197	0.894236	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_41.NNATGASTCATH	homer_19.GCTATTTTTAGC	0.199635	0.168922	0.182999	0.182999	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_41.NNATGASTCATH	homer_20.GGCVGTTR	0.387247	0.165963	0.193623	0.290435	12	8	6	14	0.428571	0.500000	0.750000	D	-2	37
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_41.NNATGASTCATH	homer_21.CYTGGCABNSTGCCAR	0.270977	0.203233	0.270977	0.203233	12	16	12	16	0.750000	1.000000	0.750000	R	-4	53
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_41.NNATGASTCATH	homer_22.BBCTTATCTS	0.372512	0.257893	0.279384	0.335261	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_41.NNATGASTCATH	homer_23.VACAGGAAAT	0.330857	0.154400	0.193000	0.231600	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_41.NNATGASTCATH	homer_24.RGKGGGCGKGGC	0.268762	0.110667	0.156778	0.156778	12	12	7	17	0.411765	0.583333	0.583333	D	-5	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_41.NNATGASTCATH	homer_25.AGATAASR	0.377249	0.251499	0.251499	0.377249	12	8	8	12	0.666667	0.666667	1.000000	D	0	37
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_41.NNATGASTCATH	homer_26.YGGCCCCGCCCC	0.117212	0.099179	0.107444	0.107444	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_41.NNATGASTCATH	homer_27.AVCAGGAAGT	0.212842	0.177368	0.177368	0.212842	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_41.NNATGASTCATH	homer_28.RGKGGGCGGAGC	0.203107	0.101553	0.135405	0.135405	12	12	8	16	0.500000	0.666667	0.666667	D	-4	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_41.NNATGASTCATH	homer_29.AWWWTGCTGAGTCAT	0.815172	0.560431	0.747241	0.597793	12	15	11	16	0.687500	0.916667	0.733333	D	-4	51
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_41.NNATGASTCATH	homer_30.CAAAGGTCAG	0.281519	0.234599	0.234599	0.281519	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_41.NNATGASTCATH	homer_31.VTGACTCATC	0.976406	0.813672	0.813672	0.976406	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_41.NNATGASTCATH	homer_32.AAAGRGGAAGTG	0.239096	0.239096	0.239096	0.239096	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_41.NNATGASTCATH	homer_33.GRAASTGAAAST	0.260003	0.185716	0.216669	0.216669	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_41.NNATGASTCATH	homer_34.CCCCTCCCCCAC	0.199128	0.168493	0.182534	0.182534	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_41.NNATGASTCATH	homer_35.GAAAGTGAAAGT	0.259871	0.185622	0.216559	0.216559	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_41.NNATGASTCATH	homer_36.DATGASTCATHN	0.987139	0.987139	0.987139	0.987139	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_41.NNATGASTCATH	homer_37.NDATGASTCAYN	0.992104	0.992104	0.992104	0.992104	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_41.NNATGASTCATH	homer_38.RATGASTCAT	0.991606	0.826338	0.826338	0.991606	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_41.NNATGASTCATH	homer_39.DATGASTCAT	0.989860	0.824884	0.824884	0.989860	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_41.NNATGASTCATH	homer_40.AGTTTCAKTTTC	0.256332	0.183094	0.213610	0.213610	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_41.NNATGASTCATH	homer_41.NNATGASTCATH	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_41.NNATGASTCATH	homer_42.SAAACCACAG	0.214051	0.178376	0.178376	0.214051	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_41.NNATGASTCATH	homer_43.GAAASYGAAASY	0.164383	0.139094	0.150685	0.150685	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_41.NNATGASTCATH	homer_44.AVCAGCTG	0.653817	0.217939	0.272424	0.408636	12	8	5	15	0.333333	0.416667	0.625000	D	-3	37
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_41.NNATGASTCATH	homer_45.SGTCACGTGR	0.443302	0.253315	0.295535	0.354641	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_41.NNATGASTCATH	homer_46.NATGASTCABNN	0.986500	0.986500	0.986500	0.986500	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_41.NNATGASTCATH	homer_47.GATGASTCATCN	0.982151	0.982151	0.982151	0.982151	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_41.NNATGASTCATH	homer_48.AGTTTCASTTTC	0.296231	0.211593	0.246859	0.246859	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_41.NNATGASTCATH	homer_49.RCAGGATGTGGT	0.338090	0.139214	0.197219	0.197219	12	12	7	17	0.411765	0.583333	0.583333	D	-5	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_41.NNATGASTCATH	homer_50.GGGGGAATCCCC	0.295670	0.295670	0.295670	0.295670	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_41.NNATGASTCATH	homer_51.GCTGTGGTTW	0.285014	0.197317	0.213760	0.256512	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_41.NNATGASTCATH	homer_52.GGATGACTCATC	0.969393	0.969393	0.969393	0.969393	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_41.NNATGASTCATH	homer_53.NWAACCACADNN	0.232210	0.165864	0.193508	0.193508	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_41.NNATGASTCATH	homer_54.ACCATCTGTT	0.547857	0.205447	0.273929	0.328714	12	10	6	16	0.375000	0.500000	0.600000	D	6	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_41.NNATGASTCATH	homer_55.SVYTTCCNGGAARB	0.193501	0.102441	0.145125	0.124393	12	14	9	17	0.529412	0.750000	0.642857	R	-5	49
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_41.NNATGASTCATH	homer_56.SCCTAGCAACAG	0.213624	0.213624	0.213624	0.213624	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_41.NNATGASTCATH	homer_57.AAACCACARM	0.315235	0.218239	0.236426	0.283711	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_41.NNATGASTCATH	homer_58.RTTATGYAAB	0.416291	0.346909	0.346909	0.416291	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_41.NNATGASTCATH	homer_59.NYTTCCWGGAAR	0.166550	0.099930	0.124912	0.124912	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_41.NNATGASTCATH	homer_60.ASWTCCTGBT	0.236948	0.164041	0.177711	0.213253	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_41.NNATGASTCATH	homer_61.DGGGYGKGGC	0.290295	0.200973	0.217721	0.261265	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_41.NNATGASTCATH	homer_62.TWGTCTGV	0.358808	0.239206	0.239206	0.358808	12	8	8	12	0.666667	0.666667	1.000000	R	3	37
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_41.NNATGASTCATH	homer_63.CTGGCAGSCTGCCA	0.238065	0.174581	0.218226	0.187051	12	14	11	15	0.733333	0.916667	0.785714	R	-3	49
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_41.NNATGASTCATH	homer_64.VGGGRATTYCCC	0.157286	0.157286	0.157286	0.157286	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_41.NNATGASTCATH	homer_65.CARRGKBCAAAGTYCA	0.276079	0.178639	0.253072	0.189804	12	16	11	17	0.647059	0.916667	0.687500	D	1	53
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_41.NNATGASTCATH	homer_66.CCATTGTTNY	0.248693	0.172172	0.186520	0.223824	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_41.NNATGASTCATH	homer_67.CYAAAAATAG	0.307341	0.143426	0.179282	0.215139	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_41.NNATGASTCATH	homer_68.GGGGGGGG	0.634332	0.070481	0.105722	0.158583	12	8	2	18	0.111111	0.166667	0.250000	D	-6	37
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_41.NNATGASTCATH	homer_69.TTGAMCTTTG	0.359717	0.299764	0.299764	0.359717	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_41.NNATGASTCATH	homer_70.MGGAAGTGAAAC	0.434296	0.260578	0.325722	0.325722	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_41.NNATGASTCATH	homer_71.HACTTCCGGY	0.147657	0.123048	0.123048	0.147657	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_41.NNATGASTCATH	homer_72.NRYTTCCGGY	0.170224	0.141853	0.141853	0.170224	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_41.NNATGASTCATH	homer_73.AWWNTGCTGAGTCAT	0.817899	0.562306	0.749741	0.599793	12	15	11	16	0.687500	0.916667	0.733333	D	-4	51
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_41.NNATGASTCATH	homer_74.AGGCCTAG	0.235861	0.127002	0.137586	0.206379	12	8	7	13	0.538462	0.583333	0.875000	D	5	37
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_41.NNATGASTCATH	homer_75.VTTACGTAAYNNNNN	0.421277	0.337022	0.421277	0.337022	12	15	12	15	0.800000	1.000000	0.800000	R	-3	51
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_41.NNATGASTCATH	homer_76.TGCTGACTCA	0.686418	0.572015	0.572015	0.686418	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_41.NNATGASTCATH	homer_77.ATTGCGCAAC	0.374754	0.312295	0.312295	0.374754	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_42.SAAACCACAG	homer_1.ATTTCCTGTN	0.737002	0.245667	0.368501	0.368501	10	10	5	15	0.333333	0.500000	0.500000	R	5	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_42.SAAACCACAG	homer_2.ACCGGAAGTG	0.414581	0.223236	0.290207	0.290207	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_42.SAAACCACAG	homer_3.AACCGGAAGT	0.463287	0.308858	0.370630	0.370630	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_42.SAAACCACAG	homer_4.ACAGGAAGTG	0.794549	0.198637	0.317820	0.317820	10	10	4	16	0.250000	0.400000	0.400000	D	6	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_42.SAAACCACAG	homer_5.RACCGGAAGT	0.416240	0.277494	0.332992	0.332992	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_42.SAAACCACAG	homer_6.AGAGGAAGTG	0.474003	0.158001	0.237002	0.237002	10	10	5	15	0.333333	0.500000	0.500000	R	5	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_42.SAAACCACAG	homer_7.NNAYTTCCTGHN	0.230316	0.191930	0.230316	0.191930	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_42.SAAACCACAG	homer_8.NRYTTCCGGH	0.275366	0.225300	0.247830	0.247830	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_42.SAAACCACAG	homer_9.MACAGGAAGT	0.800300	0.266767	0.400150	0.400150	10	10	5	15	0.333333	0.500000	0.500000	D	5	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_42.SAAACCACAG	homer_10.ACTTCCKGKT	0.300158	0.200106	0.240127	0.240127	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_42.SAAACCACAG	homer_11.ACVAGGAAGT	0.293777	0.158188	0.205644	0.205644	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_42.SAAACCACAG	homer_12.YCTTATCTBN	0.279515	0.228694	0.251564	0.251564	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_42.SAAACCACAG	homer_13.NBWGATAAGR	0.305825	0.250220	0.275242	0.275242	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_42.SAAACCACAG	homer_14.TGGCAGTTGG	0.422118	0.422118	0.422118	0.422118	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_42.SAAACCACAG	homer_15.AVCCGGAAGT	0.424529	0.283020	0.339623	0.339623	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_42.SAAACCACAG	homer_16.ANCAGGAAGT	0.232312	0.125091	0.162618	0.162618	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_42.SAAACCACAG	homer_17.SAGATAAGRV	0.224217	0.224217	0.224217	0.224217	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_42.SAAACCACAG	homer_18.TGCTGAGTCA	0.408093	0.219742	0.285665	0.285665	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_42.SAAACCACAG	homer_19.GCTATTTTTAGC	0.330630	0.275525	0.330630	0.275525	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_42.SAAACCACAG	homer_20.GGCVGTTR	0.491334	0.393067	0.393067	0.491334	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_42.SAAACCACAG	homer_21.CYTGGCABNSTGCCAR	0.392212	0.207642	0.352991	0.220619	10	16	9	17	0.529412	0.900000	0.562500	R	-7	49
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_42.SAAACCACAG	homer_22.BBCTTATCTS	0.239026	0.239026	0.239026	0.239026	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_42.SAAACCACAG	homer_23.VACAGGAAAT	0.742647	0.247549	0.371324	0.371324	10	10	5	15	0.333333	0.500000	0.500000	D	5	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_42.SAAACCACAG	homer_24.RGKGGGCGKGGC	0.405264	0.280567	0.364737	0.303948	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_42.SAAACCACAG	homer_25.AGATAASR	0.308303	0.246642	0.246642	0.308303	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_42.SAAACCACAG	homer_26.YGGCCCCGCCCC	0.242274	0.201895	0.242274	0.201895	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_42.SAAACCACAG	homer_27.AVCAGGAAGT	0.240791	0.160527	0.192633	0.192633	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_42.SAAACCACAG	homer_28.RGKGGGCGGAGC	0.399753	0.276752	0.359778	0.299815	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_42.SAAACCACAG	homer_29.AWWWTGCTGAGTCAT	0.375762	0.250508	0.375762	0.250508	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_42.SAAACCACAG	homer_30.CAAAGGTCAG	0.421927	0.421927	0.421927	0.421927	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_42.SAAACCACAG	homer_31.VTGACTCATC	0.258011	0.172007	0.206409	0.206409	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_42.SAAACCACAG	homer_32.AAAGRGGAAGTG	0.297486	0.205952	0.267738	0.223115	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_42.SAAACCACAG	homer_33.GRAASTGAAAST	0.340408	0.283674	0.340408	0.283674	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_42.SAAACCACAG	homer_34.CCCCTCCCCCAC	0.376509	0.313758	0.376509	0.313758	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_42.SAAACCACAG	homer_35.GAAAGTGAAAGT	0.355229	0.296024	0.355229	0.296024	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_42.SAAACCACAG	homer_36.DATGASTCATHN	0.228559	0.190466	0.228559	0.190466	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_42.SAAACCACAG	homer_37.NDATGASTCAYN	0.236851	0.197376	0.236851	0.197376	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_42.SAAACCACAG	homer_38.RATGASTCAT	0.213587	0.174753	0.192228	0.192228	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_42.SAAACCACAG	homer_39.DATGASTCAT	0.222365	0.181935	0.200129	0.200129	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_42.SAAACCACAG	homer_40.AGTTTCAKTTTC	0.418586	0.348822	0.418586	0.348822	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_42.SAAACCACAG	homer_41.NNATGASTCATH	0.214051	0.178376	0.214051	0.178376	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_42.SAAACCACAG	homer_42.SAAACCACAG	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_42.SAAACCACAG	homer_43.GAAASYGAAASY	0.504544	0.420453	0.504544	0.420453	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_42.SAAACCACAG	homer_44.AVCAGCTG	0.325151	0.260120	0.260120	0.325151	10	8	8	10	0.800000	0.800000	1.000000	D	2	33
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_42.SAAACCACAG	homer_45.SGTCACGTGR	0.418565	0.279044	0.334852	0.334852	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_42.SAAACCACAG	homer_46.NATGASTCABNN	0.212325	0.176938	0.212325	0.176938	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_42.SAAACCACAG	homer_47.GATGASTCATCN	0.216469	0.180391	0.216469	0.180391	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_42.SAAACCACAG	homer_48.AGTTTCASTTTC	0.392894	0.327411	0.392894	0.327411	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_42.SAAACCACAG	homer_49.RCAGGATGTGGT	0.792804	0.369975	0.554963	0.462469	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_42.SAAACCACAG	homer_50.GGGGGAATCCCC	0.530260	0.303006	0.424208	0.353507	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_42.SAAACCACAG	homer_51.GCTGTGGTTW	0.991582	0.811295	0.892424	0.892424	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_42.SAAACCACAG	homer_52.GGATGACTCATC	0.195992	0.163327	0.195992	0.163327	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_42.SAAACCACAG	homer_53.NWAACCACADNN	0.968572	0.807144	0.968572	0.807144	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_42.SAAACCACAG	homer_54.ACCATCTGTT	0.449953	0.242283	0.314967	0.314967	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_42.SAAACCACAG	homer_55.SVYTTCCNGGAARB	0.417226	0.139075	0.250336	0.178811	10	14	6	18	0.333333	0.600000	0.428571	R	-8	45
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_42.SAAACCACAG	homer_56.SCCTAGCAACAG	0.451592	0.376327	0.451592	0.376327	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_42.SAAACCACAG	homer_57.AAACCACARM	0.986083	0.806795	0.887475	0.887475	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_42.SAAACCACAG	homer_58.RTTATGYAAB	0.674928	0.224976	0.337464	0.337464	10	10	5	15	0.333333	0.500000	0.500000	D	-5	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_42.SAAACCACAG	homer_59.NYTTCCWGGAAR	0.517490	0.152203	0.258745	0.215621	10	12	5	17	0.294118	0.500000	0.416667	R	-7	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_42.SAAACCACAG	homer_60.ASWTCCTGBT	0.326887	0.217925	0.261510	0.261510	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_42.SAAACCACAG	homer_61.DGGGYGKGGC	0.559324	0.301174	0.391526	0.391526	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_42.SAAACCACAG	homer_62.TWGTCTGV	0.398981	0.319185	0.319185	0.398981	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_42.SAAACCACAG	homer_63.CTGGCAGSCTGCCA	0.465547	0.232773	0.372437	0.266027	10	14	8	16	0.500000	0.800000	0.571429	R	-6	45
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_42.SAAACCACAG	homer_64.VGGGRATTYCCC	0.313253	0.261044	0.313253	0.261044	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_42.SAAACCACAG	homer_65.CARRGKBCAAAGTYCA	0.473855	0.296159	0.473855	0.296159	10	16	10	16	0.625000	1.000000	0.625000	D	-2	49
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_42.SAAACCACAG	homer_66.CCATTGTTNY	0.465789	0.465789	0.465789	0.465789	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_42.SAAACCACAG	homer_67.CYAAAAATAG	0.276397	0.276397	0.276397	0.276397	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_42.SAAACCACAG	homer_68.GGGGGGGG	0.458636	0.229318	0.275181	0.343977	10	8	6	12	0.500000	0.600000	0.750000	R	4	33
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_42.SAAACCACAG	homer_69.TTGAMCTTTG	0.372224	0.372224	0.372224	0.372224	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_42.SAAACCACAG	homer_70.MGGAAGTGAAAC	0.243664	0.203053	0.243664	0.203053	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_42.SAAACCACAG	homer_71.HACTTCCGGY	0.380683	0.204983	0.266478	0.266478	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_42.SAAACCACAG	homer_72.NRYTTCCGGY	0.396795	0.213659	0.277757	0.277757	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_42.SAAACCACAG	homer_73.AWWNTGCTGAGTCAT	0.381290	0.254193	0.381290	0.254193	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_42.SAAACCACAG	homer_74.AGGCCTAG	0.355626	0.226307	0.248938	0.311172	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_42.SAAACCACAG	homer_75.VTTACGTAAYNNNNN	0.430459	0.286973	0.430459	0.286973	10	15	10	15	0.666667	1.000000	0.666667	D	-5	47
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_42.SAAACCACAG	homer_76.TGCTGACTCA	0.330652	0.270534	0.297587	0.297587	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_42.SAAACCACAG	homer_77.ATTGCGCAAC	0.734756	0.244919	0.367378	0.367378	10	10	5	15	0.333333	0.500000	0.500000	D	-5	37
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_43.GAAASYGAAASY	homer_1.ATTTCCTGTN	0.449859	0.374883	0.374883	0.449859	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_43.GAAASYGAAASY	homer_2.ACCGGAAGTG	0.624186	0.432128	0.468139	0.561767	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_43.GAAASYGAAASY	homer_3.AACCGGAAGT	0.638495	0.532080	0.532080	0.638495	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_43.GAAASYGAAASY	homer_4.ACAGGAAGTG	0.604593	0.418564	0.453445	0.544134	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_43.GAAASYGAAASY	homer_5.RACCGGAAGT	0.628114	0.523429	0.523429	0.628114	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_43.GAAASYGAAASY	homer_6.AGAGGAAGTG	0.613353	0.424629	0.460014	0.552017	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_43.GAAASYGAAASY	homer_7.NNAYTTCCTGHN	0.514542	0.367530	0.428785	0.428785	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_43.GAAASYGAAASY	homer_8.NRYTTCCGGH	0.596636	0.413056	0.447477	0.536973	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_43.GAAASYGAAASY	homer_9.MACAGGAAGT	0.588565	0.490470	0.490470	0.588565	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_43.GAAASYGAAASY	homer_10.ACTTCCKGKT	0.637042	0.530869	0.530869	0.637042	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_43.GAAASYGAAASY	homer_11.ACVAGGAAGT	0.594106	0.495089	0.495089	0.594106	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_43.GAAASYGAAASY	homer_12.YCTTATCTBN	0.319747	0.221364	0.239811	0.287773	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_43.GAAASYGAAASY	homer_13.NBWGATAAGR	0.331069	0.229202	0.248302	0.297963	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_43.GAAASYGAAASY	homer_14.TGGCAGTTGG	0.473692	0.394743	0.394743	0.473692	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_43.GAAASYGAAASY	homer_15.AVCCGGAAGT	0.620924	0.517437	0.517437	0.620924	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_43.GAAASYGAAASY	homer_16.ANCAGGAAGT	0.576675	0.480563	0.480563	0.576675	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_43.GAAASYGAAASY	homer_17.SAGATAAGRV	0.390592	0.223196	0.260395	0.312474	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_43.GAAASYGAAASY	homer_18.TGCTGAGTCA	0.214336	0.148386	0.160752	0.192902	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_43.GAAASYGAAASY	homer_19.GCTATTTTTAGC	0.267133	0.267133	0.267133	0.267133	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_43.GAAASYGAAASY	homer_20.GGCVGTTR	0.461676	0.307784	0.307784	0.461676	12	8	8	12	0.666667	0.666667	1.000000	R	1	37
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_43.GAAASYGAAASY	homer_21.CYTGGCABNSTGCCAR	0.284442	0.113777	0.189628	0.142221	12	16	8	20	0.400000	0.666667	0.500000	R	4	53
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_43.GAAASYGAAASY	homer_22.BBCTTATCTS	0.395815	0.226180	0.263877	0.316652	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_43.GAAASYGAAASY	homer_23.VACAGGAAAT	0.549961	0.458301	0.458301	0.549961	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_43.GAAASYGAAASY	homer_24.RGKGGGCGKGGC	0.156140	0.093684	0.117105	0.117105	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_43.GAAASYGAAASY	homer_25.AGATAASR	0.449003	0.241771	0.261918	0.392877	12	8	7	13	0.538462	0.583333	0.875000	D	-1	37
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_43.GAAASYGAAASY	homer_26.YGGCCCCGCCCC	0.113093	0.095694	0.103669	0.103669	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_43.GAAASYGAAASY	homer_27.AVCAGGAAGT	0.589817	0.491514	0.491514	0.589817	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_43.GAAASYGAAASY	homer_28.RGKGGGCGGAGC	0.164944	0.139568	0.151199	0.151199	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_43.GAAASYGAAASY	homer_29.AWWWTGCTGAGTCAT	0.241748	0.193398	0.241748	0.193398	12	15	12	15	0.800000	1.000000	0.800000	R	-2	51
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_43.GAAASYGAAASY	homer_30.CAAAGGTCAG	0.343048	0.285873	0.285873	0.343048	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_43.GAAASYGAAASY	homer_31.VTGACTCATC	0.239338	0.136764	0.159559	0.191470	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_43.GAAASYGAAASY	homer_32.AAAGRGGAAGTG	0.726639	0.614848	0.666086	0.666086	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_43.GAAASYGAAASY	homer_33.GRAASTGAAAST	0.941228	0.941228	0.941228	0.941228	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_43.GAAASYGAAASY	homer_34.CCCCTCCCCCAC	0.322134	0.132643	0.187912	0.187912	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_43.GAAASYGAAASY	homer_35.GAAAGTGAAAGT	0.959544	0.959544	0.959544	0.959544	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_43.GAAASYGAAASY	homer_36.DATGASTCATHN	0.188397	0.134569	0.156997	0.156997	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_43.GAAASYGAAASY	homer_37.NDATGASTCAYN	0.209085	0.176918	0.191661	0.191661	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_43.GAAASYGAAASY	homer_38.RATGASTCAT	0.169244	0.141037	0.141037	0.169244	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_43.GAAASYGAAASY	homer_39.DATGASTCAT	0.192022	0.160019	0.160019	0.192022	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_43.GAAASYGAAASY	homer_40.AGTTTCAKTTTC	0.951560	0.951560	0.951560	0.951560	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_43.GAAASYGAAASY	homer_41.NNATGASTCATH	0.164383	0.139094	0.150685	0.150685	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_43.GAAASYGAAASY	homer_42.SAAACCACAG	0.504544	0.420453	0.420453	0.504544	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_43.GAAASYGAAASY	homer_43.GAAASYGAAASY	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_43.GAAASYGAAASY	homer_44.AVCAGCTG	0.242544	0.161696	0.161696	0.242544	12	8	8	12	0.666667	0.666667	1.000000	R	1	37
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_43.GAAASYGAAASY	homer_45.SGTCACGTGR	0.323867	0.185067	0.215911	0.259093	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_43.GAAASYGAAASY	homer_46.NATGASTCABNN	0.167809	0.141993	0.153825	0.153825	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_43.GAAASYGAAASY	homer_47.GATGASTCATCN	0.157619	0.133370	0.144484	0.144484	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_43.GAAASYGAAASY	homer_48.AGTTTCASTTTC	0.951819	0.951819	0.951819	0.951819	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_43.GAAASYGAAASY	homer_49.RCAGGATGTGGT	0.461064	0.276639	0.345798	0.345798	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_43.GAAASYGAAASY	homer_50.GGGGGAATCCCC	0.267883	0.191345	0.223236	0.223236	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_43.GAAASYGAAASY	homer_51.GCTGTGGTTW	0.451426	0.376188	0.376188	0.451426	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_43.GAAASYGAAASY	homer_52.GGATGACTCATC	0.167554	0.119682	0.139628	0.139628	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_43.GAAASYGAAASY	homer_53.NWAACCACADNN	0.381191	0.381191	0.381191	0.381191	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_43.GAAASYGAAASY	homer_54.ACCATCTGTT	0.294382	0.245318	0.245318	0.294382	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_43.GAAASYGAAASY	homer_55.SVYTTCCNGGAARB	0.669799	0.246768	0.390716	0.334899	12	14	7	19	0.368421	0.583333	0.500000	R	-7	49
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_43.GAAASYGAAASY	homer_56.SCCTAGCAACAG	0.639459	0.263306	0.373018	0.373018	12	12	7	17	0.411765	0.583333	0.583333	D	-5	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_43.GAAASYGAAASY	homer_57.AAACCACARM	0.517464	0.431220	0.431220	0.517464	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_43.GAAASYGAAASY	homer_58.RTTATGYAAB	0.324004	0.270004	0.270004	0.324004	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_43.GAAASYGAAASY	homer_59.NYTTCCWGGAAR	0.684704	0.228235	0.342352	0.342352	12	12	6	18	0.333333	0.500000	0.500000	R	-6	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_43.GAAASYGAAASY	homer_60.ASWTCCTGBT	0.492626	0.410522	0.410522	0.492626	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_43.GAAASYGAAASY	homer_61.DGGGYGKGGC	0.167835	0.095906	0.111890	0.134268	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_43.GAAASYGAAASY	homer_62.TWGTCTGV	0.284250	0.153058	0.165813	0.248719	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_43.GAAASYGAAASY	homer_63.CTGGCAGSCTGCCA	0.324784	0.144348	0.216522	0.185591	12	14	8	18	0.444444	0.666667	0.571429	D	4	49
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_43.GAAASYGAAASY	homer_64.VGGGRATTYCCC	0.481832	0.240916	0.321221	0.321221	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_43.GAAASYGAAASY	homer_65.CARRGKBCAAAGTYCA	0.452522	0.339392	0.452522	0.339392	12	16	12	16	0.750000	1.000000	0.750000	D	-1	53
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_43.GAAASYGAAASY	homer_66.CCATTGTTNY	0.280549	0.233791	0.233791	0.280549	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_43.GAAASYGAAASY	homer_67.CYAAAAATAG	0.516389	0.295080	0.344260	0.413111	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_43.GAAASYGAAASY	homer_68.GGGGGGGG	0.203156	0.109392	0.118508	0.177761	12	8	7	13	0.538462	0.583333	0.875000	D	-1	37
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_43.GAAASYGAAASY	homer_69.TTGAMCTTTG	0.398155	0.331796	0.331796	0.398155	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_43.GAAASYGAAASY	homer_70.MGGAAGTGAAAC	0.812127	0.687184	0.744450	0.744450	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_43.GAAASYGAAASY	homer_71.HACTTCCGGY	0.612877	0.424300	0.459658	0.551589	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_43.GAAASYGAAASY	homer_72.NRYTTCCGGY	0.589269	0.407955	0.441951	0.530342	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_43.GAAASYGAAASY	homer_73.AWWNTGCTGAGTCAT	0.221134	0.176907	0.221134	0.176907	12	15	12	15	0.800000	1.000000	0.800000	R	-2	51
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_43.GAAASYGAAASY	homer_74.AGGCCTAG	0.709855	0.078873	0.118309	0.177464	12	8	2	18	0.111111	0.166667	0.250000	R	10	37
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_43.GAAASYGAAASY	homer_75.VTTACGTAAYNNNNN	0.437090	0.257112	0.364241	0.291393	12	15	10	17	0.588235	0.833333	0.666667	D	-5	51
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_43.GAAASYGAAASY	homer_76.TGCTGACTCA	0.215202	0.148986	0.161402	0.193682	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_43.GAAASYGAAASY	homer_77.ATTGCGCAAC	0.408598	0.340499	0.340499	0.408598	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_44.AVCAGCTG	homer_1.ATTTCCTGTN	0.321554	0.257243	0.321554	0.257243	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_44.AVCAGCTG	homer_2.ACCGGAAGTG	0.391523	0.313219	0.391523	0.313219	8	10	8	10	0.800000	1.000000	0.800000	D	0	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_44.AVCAGCTG	homer_3.AACCGGAAGT	0.428519	0.342815	0.428519	0.342815	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_44.AVCAGCTG	homer_4.ACAGGAAGTG	0.296935	0.237548	0.296935	0.237548	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_44.AVCAGCTG	homer_5.RACCGGAAGT	0.367180	0.293744	0.367180	0.293744	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_44.AVCAGCTG	homer_6.AGAGGAAGTG	0.262186	0.209748	0.262186	0.209748	8	10	8	10	0.800000	1.000000	0.800000	D	-2	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_44.AVCAGCTG	homer_7.NNAYTTCCTGHN	0.339100	0.182592	0.296712	0.197808	8	12	7	13	0.538462	0.875000	0.583333	D	-5	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_44.AVCAGCTG	homer_8.NRYTTCCGGH	0.325871	0.260697	0.325871	0.260697	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_44.AVCAGCTG	homer_9.MACAGGAAGT	0.355295	0.284236	0.355295	0.284236	8	10	8	10	0.800000	1.000000	0.800000	D	0	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_44.AVCAGCTG	homer_10.ACTTCCKGKT	0.389938	0.248142	0.341196	0.272957	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_44.AVCAGCTG	homer_11.ACVAGGAAGT	0.405730	0.258192	0.355013	0.284011	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_44.AVCAGCTG	homer_12.YCTTATCTBN	0.398294	0.253460	0.348508	0.278806	8	10	7	11	0.636364	0.875000	0.700000	R	1	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_44.AVCAGCTG	homer_13.NBWGATAAGR	0.396259	0.252165	0.346726	0.277381	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_44.AVCAGCTG	homer_14.TGGCAGTTGG	0.614552	0.491641	0.614552	0.491641	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_44.AVCAGCTG	homer_15.AVCCGGAAGT	0.418233	0.334586	0.418233	0.334586	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_44.AVCAGCTG	homer_16.ANCAGGAAGT	0.438918	0.279311	0.384053	0.307242	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_44.AVCAGCTG	homer_17.SAGATAAGRV	0.440469	0.220235	0.330352	0.264282	8	10	6	12	0.500000	0.750000	0.600000	D	2	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_44.AVCAGCTG	homer_18.TGCTGAGTCA	0.616910	0.392579	0.539797	0.431837	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_44.AVCAGCTG	homer_19.GCTATTTTTAGC	0.354642	0.151989	0.265981	0.177321	8	12	6	14	0.428571	0.750000	0.500000	R	-6	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_44.AVCAGCTG	homer_20.GGCVGTTR	0.511557	0.511557	0.511557	0.511557	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_44.AVCAGCTG	homer_21.CYTGGCABNSTGCCAR	0.508585	0.169528	0.381439	0.190719	8	16	6	18	0.333333	0.750000	0.375000	R	-10	45
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_44.AVCAGCTG	homer_22.BBCTTATCTS	0.409794	0.204897	0.307345	0.245876	8	10	6	12	0.500000	0.750000	0.600000	R	2	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_44.AVCAGCTG	homer_23.VACAGGAAAT	0.348945	0.279156	0.348945	0.279156	8	10	8	10	0.800000	1.000000	0.800000	D	0	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_44.AVCAGCTG	homer_24.RGKGGGCGKGGC	0.265074	0.142732	0.231940	0.154627	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_44.AVCAGCTG	homer_25.AGATAASR	0.279914	0.217711	0.244925	0.244925	8	8	7	9	0.777778	0.875000	0.875000	R	-1	29
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_44.AVCAGCTG	homer_26.YGGCCCCGCCCC	0.500569	0.166856	0.312856	0.208571	8	12	5	15	0.333333	0.625000	0.416667	R	-7	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_44.AVCAGCTG	homer_27.AVCAGGAAGT	0.415395	0.264342	0.363470	0.290776	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_44.AVCAGCTG	homer_28.RGKGGGCGGAGC	0.294579	0.158620	0.257757	0.171838	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_44.AVCAGCTG	homer_29.AWWWTGCTGAGTCAT	0.581389	0.310074	0.581389	0.310074	8	15	8	15	0.533333	1.000000	0.533333	D	-1	43
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_44.AVCAGCTG	homer_30.CAAAGGTCAG	0.662093	0.254651	0.413808	0.331047	8	10	5	13	0.384615	0.625000	0.500000	D	-5	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_44.AVCAGCTG	homer_31.VTGACTCATC	0.562960	0.281480	0.422220	0.337776	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_44.AVCAGCTG	homer_32.AAAGRGGAAGTG	0.281651	0.187767	0.281651	0.187767	8	12	8	12	0.666667	1.000000	0.666667	R	-3	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_44.AVCAGCTG	homer_33.GRAASTGAAAST	0.279993	0.186662	0.279993	0.186662	8	12	8	12	0.666667	1.000000	0.666667	R	-3	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_44.AVCAGCTG	homer_34.CCCCTCCCCCAC	0.404567	0.134856	0.252855	0.168570	8	12	5	15	0.333333	0.625000	0.416667	D	-7	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_44.AVCAGCTG	homer_35.GAAAGTGAAAGT	0.291872	0.194581	0.291872	0.194581	8	12	8	12	0.666667	1.000000	0.666667	R	-3	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_44.AVCAGCTG	homer_36.DATGASTCATHN	0.457946	0.246586	0.400702	0.267135	8	12	7	13	0.538462	0.875000	0.583333	D	-5	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_44.AVCAGCTG	homer_37.NDATGASTCAYN	0.415285	0.223615	0.363374	0.242249	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_44.AVCAGCTG	homer_38.RATGASTCAT	0.517659	0.258830	0.388244	0.310596	8	10	6	12	0.500000	0.750000	0.600000	R	-4	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_44.AVCAGCTG	homer_39.DATGASTCAT	0.489455	0.244728	0.367091	0.293673	8	10	6	12	0.500000	0.750000	0.600000	R	-4	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_44.AVCAGCTG	homer_40.AGTTTCAKTTTC	0.251675	0.167783	0.251675	0.167783	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_44.AVCAGCTG	homer_41.NNATGASTCATH	0.653817	0.217939	0.408636	0.272424	8	12	5	15	0.333333	0.625000	0.416667	D	3	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_44.AVCAGCTG	homer_42.SAAACCACAG	0.325151	0.260120	0.325151	0.260120	8	10	8	10	0.800000	1.000000	0.800000	D	-2	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_44.AVCAGCTG	homer_43.GAAASYGAAASY	0.242544	0.161696	0.242544	0.161696	8	12	8	12	0.666667	1.000000	0.666667	R	-3	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_44.AVCAGCTG	homer_44.AVCAGCTG	1.000000	1.000000	1.000000	1.000000	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_44.AVCAGCTG	homer_45.SGTCACGTGR	0.531502	0.425202	0.531502	0.425202	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_44.AVCAGCTG	homer_46.NATGASTCABNN	0.452943	0.243892	0.396325	0.264217	8	12	7	13	0.538462	0.875000	0.583333	D	-5	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_44.AVCAGCTG	homer_47.GATGASTCATCN	0.484553	0.260913	0.423984	0.282656	8	12	7	13	0.538462	0.875000	0.583333	D	-5	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_44.AVCAGCTG	homer_48.AGTTTCASTTTC	0.305213	0.203476	0.305213	0.203476	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_44.AVCAGCTG	homer_49.RCAGGATGTGGT	0.336925	0.224617	0.336925	0.224617	8	12	8	12	0.666667	1.000000	0.666667	R	0	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_44.AVCAGCTG	homer_50.GGGGGAATCCCC	0.255713	0.109591	0.191785	0.127857	8	12	6	14	0.428571	0.750000	0.500000	D	-6	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_44.AVCAGCTG	homer_51.GCTGTGGTTW	0.625861	0.312931	0.469396	0.375517	8	10	6	12	0.500000	0.750000	0.600000	R	-4	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_44.AVCAGCTG	homer_52.GGATGACTCATC	0.473857	0.255154	0.414625	0.276417	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_44.AVCAGCTG	homer_53.NWAACCACADNN	0.460507	0.247965	0.402944	0.268629	8	12	7	13	0.538462	0.875000	0.583333	D	-5	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_44.AVCAGCTG	homer_54.ACCATCTGTT	0.858001	0.686401	0.858001	0.686401	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_44.AVCAGCTG	homer_55.SVYTTCCNGGAARB	0.192591	0.110052	0.192591	0.110052	8	14	8	14	0.571429	1.000000	0.571429	D	0	41
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_44.AVCAGCTG	homer_56.SCCTAGCAACAG	0.472947	0.315298	0.472947	0.315298	8	12	8	12	0.666667	1.000000	0.666667	D	-4	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_44.AVCAGCTG	homer_57.AAACCACARM	0.561337	0.280668	0.421003	0.336802	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_44.AVCAGCTG	homer_58.RTTATGYAAB	0.245683	0.196546	0.245683	0.196546	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_44.AVCAGCTG	homer_59.NYTTCCWGGAAR	0.888903	0.098767	0.222226	0.148151	8	12	2	18	0.111111	0.250000	0.166667	D	-10	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_44.AVCAGCTG	homer_60.ASWTCCTGBT	0.484185	0.308118	0.423662	0.338930	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_44.AVCAGCTG	homer_61.DGGGYGKGGC	0.238435	0.190748	0.238435	0.190748	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_44.AVCAGCTG	homer_62.TWGTCTGV	0.410576	0.319337	0.359254	0.359254	8	8	7	9	0.777778	0.875000	0.875000	R	1	29
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_44.AVCAGCTG	homer_63.CTGGCAGSCTGCCA	0.376630	0.215217	0.376630	0.215217	8	14	8	14	0.571429	1.000000	0.571429	R	-1	41
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_44.AVCAGCTG	homer_64.VGGGRATTYCCC	0.384832	0.128277	0.240520	0.160347	8	12	5	15	0.333333	0.625000	0.416667	R	-7	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_44.AVCAGCTG	homer_65.CARRGKBCAAAGTYCA	0.743897	0.148779	0.371948	0.185974	8	16	4	20	0.200000	0.500000	0.250000	D	-12	45
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_44.AVCAGCTG	homer_66.CCATTGTTNY	0.353456	0.282764	0.353456	0.282764	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_44.AVCAGCTG	homer_67.CYAAAAATAG	0.316209	0.121619	0.197631	0.158104	8	10	5	13	0.384615	0.625000	0.500000	D	-5	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_44.AVCAGCTG	homer_68.GGGGGGGG	0.169343	0.131711	0.148175	0.148175	8	8	7	9	0.777778	0.875000	0.875000	R	-1	29
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_44.AVCAGCTG	homer_69.TTGAMCTTTG	0.527918	0.203045	0.329949	0.263959	8	10	5	13	0.384615	0.625000	0.500000	R	-5	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_44.AVCAGCTG	homer_70.MGGAAGTGAAAC	0.279270	0.186180	0.279270	0.186180	8	12	8	12	0.666667	1.000000	0.666667	D	0	37
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_44.AVCAGCTG	homer_71.HACTTCCGGY	0.372527	0.298022	0.372527	0.298022	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_44.AVCAGCTG	homer_72.NRYTTCCGGY	0.367503	0.294002	0.367503	0.294002	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_44.AVCAGCTG	homer_73.AWWNTGCTGAGTCAT	0.633021	0.337611	0.633021	0.337611	8	15	8	15	0.533333	1.000000	0.533333	D	-1	43
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_44.AVCAGCTG	homer_74.AGGCCTAG	0.254594	0.152756	0.190945	0.190945	8	8	6	10	0.600000	0.750000	0.750000	D	-2	29
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_44.AVCAGCTG	homer_75.VTTACGTAAYNNNNN	0.367079	0.195775	0.367079	0.195775	8	15	8	15	0.533333	1.000000	0.533333	R	0	43
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_44.AVCAGCTG	homer_76.TGCTGACTCA	0.618815	0.393791	0.541463	0.433170	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_44.AVCAGCTG	homer_77.ATTGCGCAAC	0.447821	0.223910	0.335866	0.268692	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_45.SGTCACGTGR	homer_1.ATTTCCTGTN	0.282724	0.231320	0.254452	0.254452	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_45.SGTCACGTGR	homer_2.ACCGGAAGTG	0.221849	0.181513	0.199664	0.199664	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_45.SGTCACGTGR	homer_3.AACCGGAAGT	0.289329	0.192886	0.231463	0.231463	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_45.SGTCACGTGR	homer_4.ACAGGAAGTG	0.372216	0.304540	0.334994	0.334994	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_45.SGTCACGTGR	homer_5.RACCGGAAGT	0.237331	0.194180	0.213598	0.213598	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_45.SGTCACGTGR	homer_6.AGAGGAAGTG	0.431786	0.353280	0.388608	0.388608	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_45.SGTCACGTGR	homer_7.NNAYTTCCTGHN	0.169363	0.141136	0.169363	0.141136	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_45.SGTCACGTGR	homer_8.NRYTTCCGGH	0.205965	0.137310	0.164772	0.164772	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_45.SGTCACGTGR	homer_9.MACAGGAAGT	0.340168	0.278319	0.306151	0.306151	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_45.SGTCACGTGR	homer_10.ACTTCCKGKT	0.286642	0.191094	0.229313	0.229313	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_45.SGTCACGTGR	homer_11.ACVAGGAAGT	0.347213	0.231476	0.277771	0.277771	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_45.SGTCACGTGR	homer_12.YCTTATCTBN	0.310379	0.167127	0.217265	0.217265	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_45.SGTCACGTGR	homer_13.NBWGATAAGR	0.351173	0.189093	0.245821	0.245821	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_45.SGTCACGTGR	homer_14.TGGCAGTTGG	0.417641	0.417641	0.417641	0.417641	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_45.SGTCACGTGR	homer_15.AVCCGGAAGT	0.161730	0.161730	0.161730	0.161730	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_45.SGTCACGTGR	homer_16.ANCAGGAAGT	0.286123	0.190749	0.228898	0.228898	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_45.SGTCACGTGR	homer_17.SAGATAAGRV	0.205012	0.167737	0.184511	0.184511	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_45.SGTCACGTGR	homer_18.TGCTGAGTCA	0.750978	0.250326	0.375489	0.375489	10	10	5	15	0.333333	0.500000	0.500000	D	-5	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_45.SGTCACGTGR	homer_19.GCTATTTTTAGC	0.104753	0.072521	0.094278	0.078565	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_45.SGTCACGTGR	homer_20.GGCVGTTR	0.345915	0.276732	0.276732	0.345915	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_45.SGTCACGTGR	homer_21.CYTGGCABNSTGCCAR	0.532369	0.196136	0.372658	0.232912	10	16	7	19	0.368421	0.700000	0.437500	R	-9	49
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_45.SGTCACGTGR	homer_22.BBCTTATCTS	0.188304	0.154067	0.169474	0.169474	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_45.SGTCACGTGR	homer_23.VACAGGAAAT	0.292090	0.238983	0.262881	0.262881	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_45.SGTCACGTGR	homer_24.RGKGGGCGKGGC	0.303006	0.252505	0.303006	0.252505	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_45.SGTCACGTGR	homer_25.AGATAASR	0.314579	0.200186	0.220205	0.275256	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_45.SGTCACGTGR	homer_26.YGGCCCCGCCCC	0.281907	0.234922	0.281907	0.234922	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_45.SGTCACGTGR	homer_27.AVCAGGAAGT	0.400828	0.171783	0.240497	0.240497	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_45.SGTCACGTGR	homer_28.RGKGGGCGGAGC	0.415488	0.193894	0.290841	0.242368	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_45.SGTCACGTGR	homer_29.AWWWTGCTGAGTCAT	0.638724	0.201702	0.383235	0.255490	10	15	6	19	0.315789	0.600000	0.400000	D	-9	47
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_45.SGTCACGTGR	homer_30.CAAAGGTCAG	0.748783	0.320907	0.449270	0.449270	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_45.SGTCACGTGR	homer_31.VTGACTCATC	0.654072	0.280317	0.392443	0.392443	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_45.SGTCACGTGR	homer_32.AAAGRGGAAGTG	0.379499	0.262730	0.341549	0.284625	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_45.SGTCACGTGR	homer_33.GRAASTGAAAST	0.269269	0.224391	0.269269	0.224391	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_45.SGTCACGTGR	homer_34.CCCCTCCCCCAC	0.603391	0.226272	0.362034	0.301695	10	12	6	16	0.375000	0.600000	0.500000	D	-6	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_45.SGTCACGTGR	homer_35.GAAAGTGAAAGT	0.276788	0.230657	0.276788	0.230657	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_45.SGTCACGTGR	homer_36.DATGASTCATHN	0.468874	0.267928	0.375099	0.312583	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_45.SGTCACGTGR	homer_37.NDATGASTCAYN	0.557843	0.260327	0.390490	0.325409	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_45.SGTCACGTGR	homer_38.RATGASTCAT	0.513716	0.276616	0.359601	0.359601	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_45.SGTCACGTGR	homer_39.DATGASTCAT	0.486611	0.262021	0.340627	0.340627	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_45.SGTCACGTGR	homer_40.AGTTTCAKTTTC	0.281475	0.160843	0.225180	0.187650	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_45.SGTCACGTGR	homer_41.NNATGASTCATH	0.443302	0.253315	0.354641	0.295535	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_45.SGTCACGTGR	homer_42.SAAACCACAG	0.418565	0.279044	0.334852	0.334852	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_45.SGTCACGTGR	homer_43.GAAASYGAAASY	0.323867	0.185067	0.259093	0.215911	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_45.SGTCACGTGR	homer_44.AVCAGCTG	0.531502	0.425202	0.425202	0.531502	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_45.SGTCACGTGR	homer_45.SGTCACGTGR	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_45.SGTCACGTGR	homer_46.NATGASTCABNN	0.460194	0.262968	0.368155	0.306796	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_45.SGTCACGTGR	homer_47.GATGASTCATCN	0.466869	0.266782	0.373495	0.311246	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_45.SGTCACGTGR	homer_48.AGTTTCASTTTC	0.235204	0.196003	0.235204	0.196003	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_45.SGTCACGTGR	homer_49.RCAGGATGTGGT	0.456133	0.380110	0.456133	0.380110	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_45.SGTCACGTGR	homer_50.GGGGGAATCCCC	0.359076	0.134653	0.215445	0.179538	10	12	6	16	0.375000	0.600000	0.500000	D	-6	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_45.SGTCACGTGR	homer_51.GCTGTGGTTW	0.391656	0.320446	0.352490	0.352490	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_45.SGTCACGTGR	homer_52.GGATGACTCATC	0.469975	0.268557	0.375980	0.313316	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_45.SGTCACGTGR	homer_53.NWAACCACADNN	0.439826	0.366522	0.439826	0.366522	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_45.SGTCACGTGR	homer_54.ACCATCTGTT	0.536293	0.438785	0.482664	0.482664	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_45.SGTCACGTGR	homer_55.SVYTTCCNGGAARB	0.202056	0.144325	0.202056	0.144325	10	14	10	14	0.714286	1.000000	0.714286	D	-1	45
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_45.SGTCACGTGR	homer_56.SCCTAGCAACAG	0.373255	0.213289	0.298604	0.248837	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_45.SGTCACGTGR	homer_57.AAACCACARM	0.382831	0.313225	0.344548	0.344548	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_45.SGTCACGTGR	homer_58.RTTATGYAAB	0.279308	0.228524	0.251377	0.251377	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_45.SGTCACGTGR	homer_59.NYTTCCWGGAAR	0.173540	0.144616	0.173540	0.144616	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_45.SGTCACGTGR	homer_60.ASWTCCTGBT	0.259964	0.212698	0.233967	0.233967	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_45.SGTCACGTGR	homer_61.DGGGYGKGGC	0.316671	0.259094	0.285004	0.285004	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_45.SGTCACGTGR	homer_62.TWGTCTGV	0.416174	0.208087	0.249704	0.312130	10	8	6	12	0.500000	0.600000	0.750000	R	-2	33
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_45.SGTCACGTGR	homer_63.CTGGCAGSCTGCCA	0.529916	0.176639	0.317950	0.227107	10	14	6	18	0.333333	0.600000	0.428571	R	-8	45
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_45.SGTCACGTGR	homer_64.VGGGRATTYCCC	0.313329	0.146220	0.219330	0.182775	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_45.SGTCACGTGR	homer_65.CARRGKBCAAAGTYCA	0.731883	0.174258	0.365942	0.228714	10	16	5	21	0.238095	0.500000	0.312500	D	-11	49
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_45.SGTCACGTGR	homer_66.CCATTGTTNY	0.260054	0.212771	0.234049	0.234049	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_45.SGTCACGTGR	homer_67.CYAAAAATAG	0.087520	0.087520	0.087520	0.087520	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_45.SGTCACGTGR	homer_68.GGGGGGGG	0.334239	0.167119	0.200543	0.250679	10	8	6	12	0.500000	0.600000	0.750000	R	-2	33
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_45.SGTCACGTGR	homer_69.TTGAMCTTTG	0.671562	0.287812	0.402937	0.402937	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_45.SGTCACGTGR	homer_70.MGGAAGTGAAAC	0.362511	0.302093	0.362511	0.302093	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_45.SGTCACGTGR	homer_71.HACTTCCGGY	0.208531	0.139020	0.166825	0.166825	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_45.SGTCACGTGR	homer_72.NRYTTCCGGY	0.219992	0.146661	0.175993	0.175993	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_45.SGTCACGTGR	homer_73.AWWNTGCTGAGTCAT	0.650369	0.205380	0.390221	0.260148	10	15	6	19	0.315789	0.600000	0.400000	D	-9	47
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_45.SGTCACGTGR	homer_74.AGGCCTAG	0.415174	0.264202	0.290622	0.363277	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_45.SGTCACGTGR	homer_75.VTTACGTAAYNNNNN	0.376018	0.250679	0.376018	0.250679	10	15	10	15	0.666667	1.000000	0.666667	D	-4	47
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_45.SGTCACGTGR	homer_76.TGCTGACTCA	0.284485	0.189657	0.227588	0.227588	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_45.SGTCACGTGR	homer_77.ATTGCGCAAC	0.465163	0.199355	0.279098	0.279098	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_46.NATGASTCABNN	homer_1.ATTTCCTGTN	0.392581	0.183204	0.229005	0.274806	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_46.NATGASTCABNN	homer_2.ACCGGAAGTG	0.121183	0.100986	0.100986	0.121183	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_46.NATGASTCABNN	homer_3.AACCGGAAGT	0.179080	0.102331	0.119387	0.143264	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_46.NATGASTCABNN	homer_4.ACAGGAAGTG	0.496739	0.146100	0.206975	0.248370	12	10	5	17	0.294118	0.416667	0.500000	R	7	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_46.NATGASTCABNN	homer_5.RACCGGAAGT	0.162301	0.092743	0.108201	0.129841	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_46.NATGASTCABNN	homer_6.AGAGGAAGTG	0.321441	0.267867	0.267867	0.321441	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_46.NATGASTCABNN	homer_7.NNAYTTCCTGHN	0.188149	0.159203	0.172470	0.172470	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_46.NATGASTCABNN	homer_8.NRYTTCCGGH	0.167390	0.139492	0.139492	0.167390	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_46.NATGASTCABNN	homer_9.MACAGGAAGT	0.339858	0.158600	0.198251	0.237901	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_46.NATGASTCABNN	homer_10.ACTTCCKGKT	0.217135	0.180946	0.180946	0.217135	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_46.NATGASTCABNN	homer_11.ACVAGGAAGT	0.278033	0.231694	0.231694	0.278033	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_46.NATGASTCABNN	homer_12.YCTTATCTBN	0.374351	0.213915	0.249568	0.299481	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_46.NATGASTCABNN	homer_13.NBWGATAAGR	0.407000	0.232571	0.271333	0.325600	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_46.NATGASTCABNN	homer_14.TGGCAGTTGG	0.286558	0.163747	0.191039	0.229246	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_46.NATGASTCABNN	homer_15.AVCCGGAAGT	0.148488	0.084851	0.098992	0.118791	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_46.NATGASTCABNN	homer_16.ANCAGGAAGT	0.288086	0.240072	0.240072	0.288086	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_46.NATGASTCABNN	homer_17.SAGATAAGRV	0.349992	0.242302	0.262494	0.314993	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_46.NATGASTCABNN	homer_18.TGCTGAGTCA	0.910975	0.759146	0.759146	0.910975	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_46.NATGASTCABNN	homer_19.GCTATTTTTAGC	0.142043	0.101459	0.118369	0.118369	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_46.NATGASTCABNN	homer_20.GGCVGTTR	0.355313	0.152277	0.177657	0.266485	12	8	6	14	0.428571	0.500000	0.750000	R	6	37
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_46.NATGASTCABNN	homer_21.CYTGGCABNSTGCCAR	0.302924	0.227193	0.302924	0.227193	12	16	12	16	0.750000	1.000000	0.750000	D	0	53
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_46.NATGASTCABNN	homer_22.BBCTTATCTS	0.340629	0.235820	0.255472	0.306566	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_46.NATGASTCABNN	homer_23.VACAGGAAAT	0.351130	0.163861	0.204826	0.245791	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_46.NATGASTCABNN	homer_24.RGKGGGCGKGGC	0.324585	0.133652	0.189341	0.189341	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_46.NATGASTCABNN	homer_25.AGATAASR	0.361278	0.240852	0.240852	0.361278	12	8	8	12	0.666667	0.666667	1.000000	R	4	37
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_46.NATGASTCABNN	homer_26.YGGCCCCGCCCC	0.174774	0.147886	0.160209	0.160209	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_46.NATGASTCABNN	homer_27.AVCAGGAAGT	0.226424	0.188687	0.188687	0.226424	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_46.NATGASTCABNN	homer_28.RGKGGGCGGAGC	0.247221	0.123611	0.164814	0.164814	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_46.NATGASTCABNN	homer_29.AWWWTGCTGAGTCAT	0.824136	0.566593	0.755458	0.604366	12	15	11	16	0.687500	0.916667	0.733333	R	1	51
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_46.NATGASTCABNN	homer_30.CAAAGGTCAG	0.291667	0.243056	0.243056	0.291667	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_46.NATGASTCABNN	homer_31.VTGACTCATC	0.985587	0.821322	0.821322	0.985587	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_46.NATGASTCABNN	homer_32.AAAGRGGAAGTG	0.258501	0.258501	0.258501	0.258501	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_46.NATGASTCABNN	homer_33.GRAASTGAAAST	0.273818	0.195584	0.228182	0.228182	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_46.NATGASTCABNN	homer_34.CCCCTCCCCCAC	0.264335	0.223668	0.242307	0.242307	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_46.NATGASTCABNN	homer_35.GAAAGTGAAAGT	0.268430	0.191735	0.223691	0.223691	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_46.NATGASTCABNN	homer_36.DATGASTCATHN	0.991230	0.991230	0.991230	0.991230	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_46.NATGASTCABNN	homer_37.NDATGASTCAYN	0.980592	0.980592	0.980592	0.980592	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_46.NATGASTCABNN	homer_38.RATGASTCAT	0.995176	0.829314	0.829314	0.995176	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_46.NATGASTCABNN	homer_39.DATGASTCAT	0.991880	0.826566	0.826566	0.991880	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_46.NATGASTCABNN	homer_40.AGTTTCAKTTTC	0.265515	0.189654	0.221262	0.221262	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_46.NATGASTCABNN	homer_41.NNATGASTCATH	0.986500	0.986500	0.986500	0.986500	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_46.NATGASTCABNN	homer_42.SAAACCACAG	0.212325	0.176938	0.176938	0.212325	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_46.NATGASTCABNN	homer_43.GAAASYGAAASY	0.167809	0.141993	0.153825	0.153825	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_46.NATGASTCABNN	homer_44.AVCAGCTG	0.452943	0.243892	0.264217	0.396325	12	8	7	13	0.538462	0.583333	0.875000	D	5	37
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_46.NATGASTCABNN	homer_45.SGTCACGTGR	0.460194	0.262968	0.306796	0.368155	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_46.NATGASTCABNN	homer_46.NATGASTCABNN	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_46.NATGASTCABNN	homer_47.GATGASTCATCN	0.990054	0.990054	0.990054	0.990054	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_46.NATGASTCABNN	homer_48.AGTTTCASTTTC	0.311114	0.222224	0.259261	0.259261	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_46.NATGASTCABNN	homer_49.RCAGGATGTGGT	0.372401	0.153341	0.217234	0.217234	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_46.NATGASTCABNN	homer_50.GGGGGAATCCCC	0.293427	0.293427	0.293427	0.293427	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_46.NATGASTCABNN	homer_51.GCTGTGGTTW	0.288457	0.199701	0.216343	0.259611	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_46.NATGASTCABNN	homer_52.GGATGACTCATC	0.977516	0.977516	0.977516	0.977516	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_46.NATGASTCABNN	homer_53.NWAACCACADNN	0.229050	0.193812	0.209963	0.209963	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_46.NATGASTCABNN	homer_54.ACCATCTGTT	0.463170	0.216146	0.270183	0.324219	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_46.NATGASTCABNN	homer_55.SVYTTCCNGGAARB	0.183101	0.081378	0.122067	0.104629	12	14	8	18	0.444444	0.666667	0.571429	R	-6	49
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_46.NATGASTCABNN	homer_56.SCCTAGCAACAG	0.200707	0.200707	0.200707	0.200707	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_46.NATGASTCABNN	homer_57.AAACCACARM	0.319075	0.220898	0.239307	0.287168	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_46.NATGASTCABNN	homer_58.RTTATGYAAB	0.387502	0.322918	0.322918	0.387502	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_46.NATGASTCABNN	homer_59.NYTTCCWGGAAR	0.179234	0.089617	0.119489	0.119489	12	12	8	16	0.500000	0.666667	0.666667	R	-4	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_46.NATGASTCABNN	homer_60.ASWTCCTGBT	0.196916	0.136326	0.147687	0.177224	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_46.NATGASTCABNN	homer_61.DGGGYGKGGC	0.345517	0.239204	0.259138	0.310966	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_46.NATGASTCABNN	homer_62.TWGTCTGV	0.372670	0.248447	0.248447	0.372670	12	8	8	12	0.666667	0.666667	1.000000	D	1	37
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_46.NATGASTCABNN	homer_63.CTGGCAGSCTGCCA	0.263075	0.192922	0.241152	0.206702	12	14	11	15	0.733333	0.916667	0.785714	D	1	49
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_46.NATGASTCABNN	homer_64.VGGGRATTYCCC	0.236516	0.141910	0.177387	0.177387	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_46.NATGASTCABNN	homer_65.CARRGKBCAAAGTYCA	0.255981	0.191986	0.255981	0.191986	12	16	12	16	0.750000	1.000000	0.750000	D	0	53
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_46.NATGASTCABNN	homer_66.CCATTGTTNY	0.279009	0.193160	0.209256	0.251108	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_46.NATGASTCABNN	homer_67.CYAAAAATAG	0.218610	0.102018	0.127522	0.153027	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_46.NATGASTCABNN	homer_68.GGGGGGGG	0.760029	0.084448	0.126672	0.190007	12	8	2	18	0.111111	0.166667	0.250000	R	10	37
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_46.NATGASTCABNN	homer_69.TTGAMCTTTG	0.371190	0.309325	0.309325	0.371190	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_46.NATGASTCABNN	homer_70.MGGAAGTGAAAC	0.446888	0.268133	0.335166	0.335166	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_46.NATGASTCABNN	homer_71.HACTTCCGGY	0.130641	0.108868	0.108868	0.130641	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_46.NATGASTCABNN	homer_72.NRYTTCCGGY	0.158789	0.132324	0.132324	0.158789	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_46.NATGASTCABNN	homer_73.AWWNTGCTGAGTCAT	0.832932	0.572641	0.763521	0.610817	12	15	11	16	0.687500	0.916667	0.733333	R	1	51
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_46.NATGASTCABNN	homer_74.AGGCCTAG	0.228866	0.152578	0.152578	0.228866	12	8	8	12	0.666667	0.666667	1.000000	D	4	37
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_46.NATGASTCABNN	homer_75.VTTACGTAAYNNNNN	0.417035	0.333628	0.417035	0.333628	12	15	12	15	0.800000	1.000000	0.800000	D	0	51
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_46.NATGASTCABNN	homer_76.TGCTGACTCA	0.723113	0.602594	0.602594	0.723113	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_46.NATGASTCABNN	homer_77.ATTGCGCAAC	0.377818	0.314848	0.314848	0.377818	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_47.GATGASTCATCN	homer_1.ATTTCCTGTN	0.374447	0.174742	0.218428	0.262113	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_47.GATGASTCATCN	homer_2.ACCGGAAGTG	0.173090	0.144242	0.144242	0.173090	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_47.GATGASTCATCN	homer_3.AACCGGAAGT	0.209629	0.119788	0.139753	0.167703	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_47.GATGASTCATCN	homer_4.ACAGGAAGTG	0.493095	0.145028	0.205456	0.246548	12	10	5	17	0.294118	0.416667	0.500000	R	7	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_47.GATGASTCATCN	homer_5.RACCGGAAGT	0.191576	0.109472	0.127717	0.153261	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_47.GATGASTCATCN	homer_6.AGAGGAAGTG	0.269084	0.224237	0.224237	0.269084	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_47.GATGASTCATCN	homer_7.NNAYTTCCTGHN	0.239982	0.203061	0.219983	0.219983	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_47.GATGASTCATCN	homer_8.NRYTTCCGGH	0.218726	0.182272	0.182272	0.218726	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_47.GATGASTCATCN	homer_9.MACAGGAAGT	0.327860	0.153001	0.191252	0.229502	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_47.GATGASTCATCN	homer_10.ACTTCCKGKT	0.161701	0.134751	0.134751	0.161701	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_47.GATGASTCATCN	homer_11.ACVAGGAAGT	0.228004	0.190003	0.190003	0.228004	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_47.GATGASTCATCN	homer_12.YCTTATCTBN	0.393345	0.224769	0.262230	0.314676	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_47.GATGASTCATCN	homer_13.NBWGATAAGR	0.418072	0.238898	0.278715	0.334458	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_47.GATGASTCATCN	homer_14.TGGCAGTTGG	0.260307	0.148747	0.173538	0.208246	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_47.GATGASTCATCN	homer_15.AVCCGGAAGT	0.159024	0.110094	0.119268	0.143122	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_47.GATGASTCATCN	homer_16.ANCAGGAAGT	0.240995	0.200829	0.200829	0.240995	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_47.GATGASTCATCN	homer_17.SAGATAAGRV	0.365817	0.253258	0.274363	0.329236	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_47.GATGASTCATCN	homer_18.TGCTGAGTCA	0.921497	0.767914	0.767914	0.921497	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_47.GATGASTCATCN	homer_19.GCTATTTTTAGC	0.132284	0.111933	0.121260	0.121260	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_47.GATGASTCATCN	homer_20.GGCVGTTR	0.449837	0.149946	0.187432	0.281148	12	8	5	15	0.333333	0.416667	0.625000	R	7	37
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_47.GATGASTCATCN	homer_21.CYTGGCABNSTGCCAR	0.295935	0.221951	0.295935	0.221951	12	16	12	16	0.750000	1.000000	0.750000	D	0	53
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_47.GATGASTCATCN	homer_22.BBCTTATCTS	0.354488	0.245415	0.265866	0.319039	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_47.GATGASTCATCN	homer_23.VACAGGAAAT	0.350780	0.163697	0.204621	0.245546	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_47.GATGASTCATCN	homer_24.RGKGGGCGKGGC	0.235609	0.141365	0.176706	0.176706	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_47.GATGASTCATCN	homer_25.AGATAASR	0.370407	0.246938	0.246938	0.370407	12	8	8	12	0.666667	0.666667	1.000000	R	4	37
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_47.GATGASTCATCN	homer_26.YGGCCCCGCCCC	0.212662	0.179945	0.194940	0.194940	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_47.GATGASTCATCN	homer_27.AVCAGGAAGT	0.177664	0.148053	0.148053	0.177664	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_47.GATGASTCATCN	homer_28.RGKGGGCGGAGC	0.286610	0.143305	0.191073	0.191073	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_47.GATGASTCATCN	homer_29.AWWWTGCTGAGTCAT	0.833463	0.573006	0.764007	0.611206	12	15	11	16	0.687500	0.916667	0.733333	R	1	51
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_47.GATGASTCATCN	homer_30.CAAAGGTCAG	0.303934	0.253278	0.253278	0.303934	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_47.GATGASTCATCN	homer_31.VTGACTCATC	0.992696	0.827247	0.827247	0.992696	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_47.GATGASTCATCN	homer_32.AAAGRGGAAGTG	0.200237	0.200237	0.200237	0.200237	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_47.GATGASTCATCN	homer_33.GRAASTGAAAST	0.277898	0.198499	0.231582	0.231582	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_47.GATGASTCATCN	homer_34.CCCCTCCCCCAC	0.220025	0.186175	0.201689	0.201689	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_47.GATGASTCATCN	homer_35.GAAAGTGAAAGT	0.271339	0.193814	0.226116	0.226116	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_47.GATGASTCATCN	homer_36.DATGASTCATHN	0.996582	0.996582	0.996582	0.996582	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_47.GATGASTCATCN	homer_37.NDATGASTCAYN	0.975091	0.975091	0.975091	0.975091	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_47.GATGASTCATCN	homer_38.RATGASTCAT	0.996616	0.830513	0.830513	0.996616	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_47.GATGASTCATCN	homer_39.DATGASTCAT	0.993491	0.827909	0.827909	0.993491	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_47.GATGASTCATCN	homer_40.AGTTTCAKTTTC	0.276089	0.197207	0.230074	0.230074	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_47.GATGASTCATCN	homer_41.NNATGASTCATH	0.982151	0.982151	0.982151	0.982151	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_47.GATGASTCATCN	homer_42.SAAACCACAG	0.216469	0.180391	0.180391	0.216469	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_47.GATGASTCATCN	homer_43.GAAASYGAAASY	0.157619	0.133370	0.144484	0.144484	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_47.GATGASTCATCN	homer_44.AVCAGCTG	0.484553	0.260913	0.282656	0.423984	12	8	7	13	0.538462	0.583333	0.875000	D	5	37
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_47.GATGASTCATCN	homer_45.SGTCACGTGR	0.466869	0.266782	0.311246	0.373495	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_47.GATGASTCATCN	homer_46.NATGASTCABNN	0.990054	0.990054	0.990054	0.990054	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_47.GATGASTCATCN	homer_47.GATGASTCATCN	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_47.GATGASTCATCN	homer_48.AGTTTCASTTTC	0.317890	0.227064	0.264908	0.264908	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_47.GATGASTCATCN	homer_49.RCAGGATGTGGT	0.367846	0.151466	0.214577	0.214577	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_47.GATGASTCATCN	homer_50.GGGGGAATCCCC	0.359859	0.359859	0.359859	0.359859	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_47.GATGASTCATCN	homer_51.GCTGTGGTTW	0.276492	0.191418	0.207369	0.248843	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_47.GATGASTCATCN	homer_52.GGATGACTCATC	0.988239	0.988239	0.988239	0.988239	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_47.GATGASTCATCN	homer_53.NWAACCACADNN	0.197838	0.197838	0.197838	0.197838	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_47.GATGASTCATCN	homer_54.ACCATCTGTT	0.495190	0.231089	0.288861	0.346633	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_47.GATGASTCATCN	homer_55.SVYTTCCNGGAARB	0.206171	0.091632	0.137448	0.117812	12	14	8	18	0.444444	0.666667	0.571429	R	-6	49
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_47.GATGASTCATCN	homer_56.SCCTAGCAACAG	0.151840	0.151840	0.151840	0.151840	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_47.GATGASTCATCN	homer_57.AAACCACARM	0.317208	0.219605	0.237906	0.285487	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_47.GATGASTCATCN	homer_58.RTTATGYAAB	0.353726	0.294771	0.294771	0.353726	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_47.GATGASTCATCN	homer_59.NYTTCCWGGAAR	0.207434	0.103717	0.138289	0.138289	12	12	8	16	0.500000	0.666667	0.666667	R	-4	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_47.GATGASTCATCN	homer_60.ASWTCCTGBT	0.253371	0.175411	0.190028	0.228034	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_47.GATGASTCATCN	homer_61.DGGGYGKGGC	0.380021	0.263091	0.285016	0.342019	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_47.GATGASTCATCN	homer_62.TWGTCTGV	0.360625	0.240417	0.240417	0.360625	12	8	8	12	0.666667	0.666667	1.000000	R	2	37
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_47.GATGASTCATCN	homer_63.CTGGCAGSCTGCCA	0.255504	0.187369	0.234212	0.200753	12	14	11	15	0.733333	0.916667	0.785714	D	1	49
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_47.GATGASTCATCN	homer_64.VGGGRATTYCCC	0.192915	0.192915	0.192915	0.192915	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_47.GATGASTCATCN	homer_65.CARRGKBCAAAGTYCA	0.254373	0.190780	0.254373	0.190780	12	16	12	16	0.750000	1.000000	0.750000	D	0	53
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_47.GATGASTCATCN	homer_66.CCATTGTTNY	0.276030	0.191097	0.207022	0.248427	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_47.GATGASTCATCN	homer_67.CYAAAAATAG	0.211796	0.098838	0.123548	0.148257	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_47.GATGASTCATCN	homer_68.GGGGGGGG	0.316058	0.105353	0.131691	0.197536	12	8	5	15	0.333333	0.416667	0.625000	R	7	37
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_47.GATGASTCATCN	homer_69.TTGAMCTTTG	0.382740	0.318950	0.318950	0.382740	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_47.GATGASTCATCN	homer_70.MGGAAGTGAAAC	0.442154	0.265292	0.331615	0.331615	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_47.GATGASTCATCN	homer_71.HACTTCCGGY	0.176044	0.146704	0.146704	0.176044	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_47.GATGASTCATCN	homer_72.NRYTTCCGGY	0.198472	0.165393	0.165393	0.198472	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_47.GATGASTCATCN	homer_73.AWWNTGCTGAGTCAT	0.843354	0.579806	0.773075	0.618460	12	15	11	16	0.687500	0.916667	0.733333	R	1	51
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_47.GATGASTCATCN	homer_74.AGGCCTAG	0.251217	0.167478	0.167478	0.251217	12	8	8	12	0.666667	0.666667	1.000000	D	4	37
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_47.GATGASTCATCN	homer_75.VTTACGTAAYNNNNN	0.369546	0.295637	0.369546	0.295637	12	15	12	15	0.800000	1.000000	0.800000	D	0	51
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_47.GATGASTCATCN	homer_76.TGCTGACTCA	0.724797	0.603998	0.603998	0.724797	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_47.GATGASTCATCN	homer_77.ATTGCGCAAC	0.333834	0.278195	0.278195	0.333834	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_48.AGTTTCASTTTC	homer_1.ATTTCCTGTN	0.468121	0.390101	0.390101	0.468121	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_48.AGTTTCASTTTC	homer_2.ACCGGAAGTG	0.542248	0.375403	0.406686	0.488023	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_48.AGTTTCASTTTC	homer_3.AACCGGAAGT	0.570069	0.475058	0.475058	0.570069	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_48.AGTTTCASTTTC	homer_4.ACAGGAAGTG	0.564078	0.390516	0.423059	0.507670	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_48.AGTTTCASTTTC	homer_5.RACCGGAAGT	0.565920	0.471600	0.471600	0.565920	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_48.AGTTTCASTTTC	homer_6.AGAGGAAGTG	0.577390	0.399731	0.433042	0.519651	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_48.AGTTTCASTTTC	homer_7.NNAYTTCCTGHN	0.419100	0.354623	0.384175	0.384175	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_48.AGTTTCASTTTC	homer_8.NRYTTCCGGH	0.445225	0.371021	0.371021	0.445225	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_48.AGTTTCASTTTC	homer_9.MACAGGAAGT	0.563732	0.469776	0.469776	0.563732	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_48.AGTTTCASTTTC	homer_10.ACTTCCKGKT	0.583245	0.486037	0.486037	0.583245	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_48.AGTTTCASTTTC	homer_11.ACVAGGAAGT	0.559121	0.465934	0.465934	0.559121	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_48.AGTTTCASTTTC	homer_12.YCTTATCTBN	0.371743	0.257361	0.278807	0.334569	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_48.AGTTTCASTTTC	homer_13.NBWGATAAGR	0.385338	0.266772	0.289003	0.346804	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_48.AGTTTCASTTTC	homer_14.TGGCAGTTGG	0.463517	0.386265	0.386265	0.463517	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_48.AGTTTCASTTTC	homer_15.AVCCGGAAGT	0.548791	0.457326	0.457326	0.548791	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_48.AGTTTCASTTTC	homer_16.ANCAGGAAGT	0.556198	0.463499	0.463499	0.556198	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_48.AGTTTCASTTTC	homer_17.SAGATAAGRV	0.405717	0.231838	0.270478	0.324574	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_48.AGTTTCASTTTC	homer_18.TGCTGAGTCA	0.322352	0.223167	0.241764	0.290117	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_48.AGTTTCASTTTC	homer_19.GCTATTTTTAGC	0.421380	0.252828	0.316035	0.316035	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_48.AGTTTCASTTTC	homer_20.GGCVGTTR	0.451955	0.301303	0.301303	0.451955	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_48.AGTTTCASTTTC	homer_21.CYTGGCABNSTGCCAR	0.322276	0.128910	0.214851	0.161138	12	16	8	20	0.400000	0.666667	0.500000	D	-8	53
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_48.AGTTTCASTTTC	homer_22.BBCTTATCTS	0.287256	0.239380	0.239380	0.287256	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_48.AGTTTCASTTTC	homer_23.VACAGGAAAT	0.535975	0.446646	0.446646	0.535975	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_48.AGTTTCASTTTC	homer_24.RGKGGGCGKGGC	0.105442	0.089220	0.096655	0.096655	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_48.AGTTTCASTTTC	homer_25.AGATAASR	0.451977	0.243372	0.263654	0.395480	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_48.AGTTTCASTTTC	homer_26.YGGCCCCGCCCC	0.237533	0.097808	0.138561	0.138561	12	12	7	17	0.411765	0.583333	0.583333	D	5	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_48.AGTTTCASTTTC	homer_27.AVCAGGAAGT	0.549976	0.458313	0.458313	0.549976	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_48.AGTTTCASTTTC	homer_28.RGKGGGCGGAGC	0.182847	0.154717	0.167610	0.167610	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_48.AGTTTCASTTTC	homer_29.AWWWTGCTGAGTCAT	0.355684	0.284547	0.355684	0.284547	12	15	12	15	0.800000	1.000000	0.800000	D	-1	51
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_48.AGTTTCASTTTC	homer_30.CAAAGGTCAG	0.286922	0.239102	0.239102	0.286922	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_48.AGTTTCASTTTC	homer_31.VTGACTCATC	0.333737	0.231049	0.250303	0.300363	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_48.AGTTTCASTTTC	homer_32.AAAGRGGAAGTG	0.668632	0.565766	0.612913	0.612913	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_48.AGTTTCASTTTC	homer_33.GRAASTGAAAST	0.939562	0.939562	0.939562	0.939562	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_48.AGTTTCASTTTC	homer_34.CCCCTCCCCCAC	0.344372	0.141800	0.200884	0.200884	12	12	7	17	0.411765	0.583333	0.583333	D	5	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_48.AGTTTCASTTTC	homer_35.GAAAGTGAAAGT	0.978351	0.978351	0.978351	0.978351	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_48.AGTTTCASTTTC	homer_36.DATGASTCATHN	0.328547	0.234676	0.273789	0.273789	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_48.AGTTTCASTTTC	homer_37.NDATGASTCAYN	0.347120	0.208272	0.260340	0.260340	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_48.AGTTTCASTTTC	homer_38.RATGASTCAT	0.333661	0.230996	0.250245	0.300295	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_48.AGTTTCASTTTC	homer_39.DATGASTCAT	0.326556	0.226077	0.244917	0.293900	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_48.AGTTTCASTTTC	homer_40.AGTTTCAKTTTC	0.960518	0.960518	0.960518	0.960518	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_48.AGTTTCASTTTC	homer_41.NNATGASTCATH	0.296231	0.211593	0.246859	0.246859	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_48.AGTTTCASTTTC	homer_42.SAAACCACAG	0.392894	0.327411	0.327411	0.392894	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_48.AGTTTCASTTTC	homer_43.GAAASYGAAASY	0.951819	0.951819	0.951819	0.951819	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_48.AGTTTCASTTTC	homer_44.AVCAGCTG	0.305213	0.203476	0.203476	0.305213	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_48.AGTTTCASTTTC	homer_45.SGTCACGTGR	0.235204	0.196003	0.196003	0.235204	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_48.AGTTTCASTTTC	homer_46.NATGASTCABNN	0.311114	0.222224	0.259261	0.259261	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_48.AGTTTCASTTTC	homer_47.GATGASTCATCN	0.317890	0.227064	0.264908	0.264908	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_48.AGTTTCASTTTC	homer_48.AGTTTCASTTTC	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_48.AGTTTCASTTTC	homer_49.RCAGGATGTGGT	0.443569	0.266141	0.332677	0.332677	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_48.AGTTTCASTTTC	homer_50.GGGGGAATCCCC	0.281733	0.201238	0.234778	0.234778	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_48.AGTTTCASTTTC	homer_51.GCTGTGGTTW	0.349101	0.290918	0.290918	0.349101	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_48.AGTTTCASTTTC	homer_52.GGATGACTCATC	0.301532	0.215380	0.251277	0.251277	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_48.AGTTTCASTTTC	homer_53.NWAACCACADNN	0.258786	0.258786	0.258786	0.258786	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_48.AGTTTCASTTTC	homer_54.ACCATCTGTT	0.336482	0.280401	0.280401	0.336482	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_48.AGTTTCASTTTC	homer_55.SVYTTCCNGGAARB	0.789260	0.236778	0.394630	0.338254	12	14	6	20	0.300000	0.500000	0.428571	D	6	49
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_48.AGTTTCASTTTC	homer_56.SCCTAGCAACAG	0.357690	0.302661	0.327883	0.327883	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_48.AGTTTCASTTTC	homer_57.AAACCACARM	0.424029	0.353357	0.353357	0.424029	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_48.AGTTTCASTTTC	homer_58.RTTATGYAAB	0.320276	0.266897	0.266897	0.320276	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_48.AGTTTCASTTTC	homer_59.NYTTCCWGGAAR	0.903117	0.237662	0.376299	0.376299	12	12	5	19	0.263158	0.416667	0.416667	D	7	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_48.AGTTTCASTTTC	homer_60.ASWTCCTGBT	0.492387	0.410323	0.410323	0.492387	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_48.AGTTTCASTTTC	homer_61.DGGGYGKGGC	0.267088	0.100158	0.133544	0.160253	12	10	6	16	0.375000	0.500000	0.600000	D	-4	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_48.AGTTTCASTTTC	homer_62.TWGTCTGV	0.386946	0.208356	0.225718	0.338578	12	8	7	13	0.538462	0.583333	0.875000	D	-1	37
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_48.AGTTTCASTTTC	homer_63.CTGGCAGSCTGCCA	0.313318	0.139252	0.208878	0.179039	12	14	8	18	0.444444	0.666667	0.571429	R	-6	49
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_48.AGTTTCASTTTC	homer_64.VGGGRATTYCCC	0.486795	0.243397	0.324530	0.324530	12	12	8	16	0.500000	0.666667	0.666667	D	-4	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_48.AGTTTCASTTTC	homer_65.CARRGKBCAAAGTYCA	0.403193	0.302395	0.403193	0.302395	12	16	12	16	0.750000	1.000000	0.750000	R	-3	53
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_48.AGTTTCASTTTC	homer_66.CCATTGTTNY	0.276744	0.230620	0.230620	0.276744	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_48.AGTTTCASTTTC	homer_67.CYAAAAATAG	0.543763	0.310722	0.362509	0.435011	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_48.AGTTTCASTTTC	homer_68.GGGGGGGG	0.255425	0.137536	0.148998	0.223497	12	8	7	13	0.538462	0.583333	0.875000	R	5	37
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_48.AGTTTCASTTTC	homer_69.TTGAMCTTTG	0.360315	0.300263	0.300263	0.360315	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_48.AGTTTCASTTTC	homer_70.MGGAAGTGAAAC	0.811149	0.686356	0.743553	0.743553	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_48.AGTTTCASTTTC	homer_71.HACTTCCGGY	0.541083	0.374596	0.405812	0.486975	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_48.AGTTTCASTTTC	homer_72.NRYTTCCGGY	0.466985	0.389154	0.389154	0.466985	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_48.AGTTTCASTTTC	homer_73.AWWNTGCTGAGTCAT	0.332285	0.265828	0.332285	0.265828	12	15	12	15	0.800000	1.000000	0.800000	D	-1	51
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_48.AGTTTCASTTTC	homer_74.AGGCCTAG	0.909980	0.101109	0.151663	0.227495	12	8	2	18	0.111111	0.166667	0.250000	D	-6	37
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_48.AGTTTCASTTTC	homer_75.VTTACGTAAYNNNNN	0.439352	0.258443	0.366127	0.292902	12	15	10	17	0.588235	0.833333	0.666667	R	2	51
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_48.AGTTTCASTTTC	homer_76.TGCTGACTCA	0.264449	0.220374	0.220374	0.264449	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_48.AGTTTCASTTTC	homer_77.ATTGCGCAAC	0.408545	0.340454	0.340454	0.408545	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_49.RCAGGATGTGGT	homer_1.ATTTCCTGTN	0.770974	0.533751	0.578231	0.693877	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_49.RCAGGATGTGGT	homer_2.ACCGGAAGTG	0.748239	0.623532	0.623532	0.748239	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_49.RCAGGATGTGGT	homer_3.AACCGGAAGT	0.770805	0.533634	0.578104	0.693725	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_49.RCAGGATGTGGT	homer_4.ACAGGAAGTG	0.923029	0.769191	0.769191	0.923029	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_49.RCAGGATGTGGT	homer_5.RACCGGAAGT	0.820529	0.568058	0.615397	0.738476	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_49.RCAGGATGTGGT	homer_6.AGAGGAAGTG	0.892603	0.743836	0.743836	0.892603	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_49.RCAGGATGTGGT	homer_7.NNAYTTCCTGHN	0.768822	0.650542	0.704754	0.704754	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_49.RCAGGATGTGGT	homer_8.NRYTTCCGGH	0.746415	0.622012	0.622012	0.746415	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_49.RCAGGATGTGGT	homer_9.MACAGGAAGT	0.891177	0.616969	0.668383	0.802059	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_49.RCAGGATGTGGT	homer_10.ACTTCCKGKT	0.860776	0.595922	0.645582	0.774698	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_49.RCAGGATGTGGT	homer_11.ACVAGGAAGT	0.866561	0.599927	0.649921	0.779905	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_49.RCAGGATGTGGT	homer_12.YCTTATCTBN	0.330261	0.275217	0.275217	0.330261	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_49.RCAGGATGTGGT	homer_13.NBWGATAAGR	0.314762	0.262302	0.262302	0.314762	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_49.RCAGGATGTGGT	homer_14.TGGCAGTTGG	0.404914	0.337429	0.337429	0.404914	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_49.RCAGGATGTGGT	homer_15.AVCCGGAAGT	0.742884	0.514305	0.557163	0.668596	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_49.RCAGGATGTGGT	homer_16.ANCAGGAAGT	0.899148	0.622487	0.674361	0.809233	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_49.RCAGGATGTGGT	homer_17.SAGATAAGRV	0.308528	0.257107	0.257107	0.308528	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_49.RCAGGATGTGGT	homer_18.TGCTGAGTCA	0.481549	0.180581	0.240774	0.288929	12	10	6	16	0.375000	0.500000	0.600000	R	-4	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_49.RCAGGATGTGGT	homer_19.GCTATTTTTAGC	0.187557	0.187557	0.187557	0.187557	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_49.RCAGGATGTGGT	homer_20.GGCVGTTR	0.445434	0.296956	0.296956	0.445434	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_49.RCAGGATGTGGT	homer_21.CYTGGCABNSTGCCAR	0.310161	0.232621	0.310161	0.232621	12	16	12	16	0.750000	1.000000	0.750000	D	0	53
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_49.RCAGGATGTGGT	homer_22.BBCTTATCTS	0.306039	0.255033	0.255033	0.306039	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_49.RCAGGATGTGGT	homer_23.VACAGGAAAT	0.777790	0.538470	0.583342	0.700011	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_49.RCAGGATGTGGT	homer_24.RGKGGGCGKGGC	0.528332	0.528332	0.528332	0.528332	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_49.RCAGGATGTGGT	homer_25.AGATAASR	0.304105	0.202737	0.202737	0.304105	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_49.RCAGGATGTGGT	homer_26.YGGCCCCGCCCC	0.419103	0.299359	0.349253	0.349253	12	12	10	14	0.714286	0.833333	0.833333	R	2	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_49.RCAGGATGTGGT	homer_27.AVCAGGAAGT	0.846194	0.585827	0.634645	0.761575	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_49.RCAGGATGTGGT	homer_28.RGKGGGCGGAGC	0.365044	0.365044	0.365044	0.365044	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_49.RCAGGATGTGGT	homer_29.AWWWTGCTGAGTCAT	0.339346	0.199616	0.282789	0.226231	12	15	10	17	0.588235	0.833333	0.666667	R	-5	51
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_49.RCAGGATGTGGT	homer_30.CAAAGGTCAG	0.237405	0.164357	0.178054	0.213665	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_49.RCAGGATGTGGT	homer_31.VTGACTCATC	0.288969	0.165125	0.192646	0.231175	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_49.RCAGGATGTGGT	homer_32.AAAGRGGAAGTG	0.806091	0.575779	0.671742	0.671742	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_49.RCAGGATGTGGT	homer_33.GRAASTGAAAST	0.563315	0.337989	0.422486	0.422486	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_49.RCAGGATGTGGT	homer_34.CCCCTCCCCCAC	0.420977	0.356211	0.385895	0.385895	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_49.RCAGGATGTGGT	homer_35.GAAAGTGAAAGT	0.492793	0.295676	0.369594	0.369594	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_49.RCAGGATGTGGT	homer_36.DATGASTCATHN	0.383850	0.158056	0.223912	0.223912	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_49.RCAGGATGTGGT	homer_37.NDATGASTCAYN	0.405804	0.135268	0.202902	0.202902	12	12	6	18	0.333333	0.500000	0.500000	R	6	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_49.RCAGGATGTGGT	homer_38.RATGASTCAT	0.395954	0.148483	0.197977	0.237573	12	10	6	16	0.375000	0.500000	0.600000	D	6	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_49.RCAGGATGTGGT	homer_39.DATGASTCAT	0.392663	0.147249	0.196332	0.235598	12	10	6	16	0.375000	0.500000	0.600000	D	6	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_49.RCAGGATGTGGT	homer_40.AGTTTCAKTTTC	0.429806	0.257883	0.322354	0.322354	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_49.RCAGGATGTGGT	homer_41.NNATGASTCATH	0.338090	0.139214	0.197219	0.197219	12	12	7	17	0.411765	0.583333	0.583333	D	5	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_49.RCAGGATGTGGT	homer_42.SAAACCACAG	0.792804	0.369975	0.462469	0.554963	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_49.RCAGGATGTGGT	homer_43.GAAASYGAAASY	0.461064	0.276639	0.345798	0.345798	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_49.RCAGGATGTGGT	homer_44.AVCAGCTG	0.336925	0.224617	0.224617	0.336925	12	8	8	12	0.666667	0.666667	1.000000	R	4	37
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_49.RCAGGATGTGGT	homer_45.SGTCACGTGR	0.456133	0.380110	0.380110	0.456133	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_49.RCAGGATGTGGT	homer_46.NATGASTCABNN	0.372401	0.153341	0.217234	0.217234	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_49.RCAGGATGTGGT	homer_47.GATGASTCATCN	0.367846	0.151466	0.214577	0.214577	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_49.RCAGGATGTGGT	homer_48.AGTTTCASTTTC	0.443569	0.266141	0.332677	0.332677	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_49.RCAGGATGTGGT	homer_49.RCAGGATGTGGT	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_49.RCAGGATGTGGT	homer_50.GGGGGAATCCCC	0.157560	0.157560	0.157560	0.157560	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_49.RCAGGATGTGGT	homer_51.GCTGTGGTTW	0.768398	0.439085	0.512266	0.614719	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_49.RCAGGATGTGGT	homer_52.GGATGACTCATC	0.312573	0.156286	0.208382	0.208382	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_49.RCAGGATGTGGT	homer_53.NWAACCACADNN	0.725289	0.435173	0.543967	0.543967	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_49.RCAGGATGTGGT	homer_54.ACCATCTGTT	0.433436	0.361197	0.361197	0.433436	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_49.RCAGGATGTGGT	homer_55.SVYTTCCNGGAARB	0.558136	0.348835	0.465113	0.398669	12	14	10	16	0.625000	0.833333	0.714286	R	-4	49
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_49.RCAGGATGTGGT	homer_56.SCCTAGCAACAG	0.289599	0.206857	0.241333	0.241333	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_49.RCAGGATGTGGT	homer_57.AAACCACARM	0.787963	0.450264	0.525308	0.630370	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_49.RCAGGATGTGGT	homer_58.RTTATGYAAB	0.332421	0.155130	0.193912	0.232694	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_49.RCAGGATGTGGT	homer_59.NYTTCCWGGAAR	0.563473	0.338084	0.422605	0.422605	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_49.RCAGGATGTGGT	homer_60.ASWTCCTGBT	0.862810	0.597330	0.647107	0.776529	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_49.RCAGGATGTGGT	homer_61.DGGGYGKGGC	0.645395	0.537829	0.537829	0.645395	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_49.RCAGGATGTGGT	homer_62.TWGTCTGV	0.349340	0.232893	0.232893	0.349340	12	8	8	12	0.666667	0.666667	1.000000	D	1	37
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_49.RCAGGATGTGGT	homer_63.CTGGCAGSCTGCCA	0.298278	0.218737	0.273421	0.234361	12	14	11	15	0.733333	0.916667	0.785714	D	1	49
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_49.RCAGGATGTGGT	homer_64.VGGGRATTYCCC	0.259624	0.185446	0.216354	0.216354	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_49.RCAGGATGTGGT	homer_65.CARRGKBCAAAGTYCA	0.305794	0.169885	0.254828	0.191121	12	16	10	18	0.555556	0.833333	0.625000	R	2	53
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_49.RCAGGATGTGGT	homer_66.CCATTGTTNY	0.312163	0.216113	0.234122	0.280946	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_49.RCAGGATGTGGT	homer_67.CYAAAAATAG	0.278702	0.232252	0.232252	0.278702	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_49.RCAGGATGTGGT	homer_68.GGGGGGGG	0.615927	0.410618	0.410618	0.615927	12	8	8	12	0.666667	0.666667	1.000000	D	3	37
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_49.RCAGGATGTGGT	homer_69.TTGAMCTTTG	0.340108	0.158717	0.198396	0.238076	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_49.RCAGGATGTGGT	homer_70.MGGAAGTGAAAC	0.631881	0.451344	0.526568	0.526568	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_49.RCAGGATGTGGT	homer_71.HACTTCCGGY	0.695653	0.579711	0.579711	0.695653	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_49.RCAGGATGTGGT	homer_72.NRYTTCCGGY	0.650638	0.542199	0.542199	0.650638	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_49.RCAGGATGTGGT	homer_73.AWWNTGCTGAGTCAT	0.356892	0.209937	0.297410	0.237928	12	15	10	17	0.588235	0.833333	0.666667	R	-5	51
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_49.RCAGGATGTGGT	homer_74.AGGCCTAG	0.330310	0.220207	0.220207	0.330310	12	8	8	12	0.666667	0.666667	1.000000	R	0	37
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_49.RCAGGATGTGGT	homer_75.VTTACGTAAYNNNNN	0.320173	0.188337	0.266810	0.213448	12	15	10	17	0.588235	0.833333	0.666667	R	2	51
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_49.RCAGGATGTGGT	homer_76.TGCTGACTCA	0.511668	0.191875	0.255834	0.307001	12	10	6	16	0.375000	0.500000	0.600000	R	-4	41
hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_49.RCAGGATGTGGT	homer_77.ATTGCGCAAC	0.542363	0.159519	0.225985	0.271182	12	10	5	17	0.294118	0.416667	0.500000	R	7	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_50.GGGGGAATCCCC	homer_1.ATTTCCTGTN	0.533764	0.305008	0.355843	0.427012	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_50.GGGGGAATCCCC	homer_2.ACCGGAAGTG	0.411591	0.342993	0.342993	0.411591	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_50.GGGGGAATCCCC	homer_3.AACCGGAAGT	0.404450	0.280004	0.303337	0.364005	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_50.GGGGGAATCCCC	homer_4.ACAGGAAGTG	0.366388	0.305323	0.305323	0.366388	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_50.GGGGGAATCCCC	homer_5.RACCGGAAGT	0.439819	0.304490	0.329864	0.395837	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_50.GGGGGAATCCCC	homer_6.AGAGGAAGTG	0.415908	0.346590	0.346590	0.415908	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_50.GGGGGAATCCCC	homer_7.NNAYTTCCTGHN	0.457062	0.386744	0.418973	0.418973	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_50.GGGGGAATCCCC	homer_8.NRYTTCCGGH	0.520696	0.433913	0.433913	0.520696	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_50.GGGGGAATCCCC	homer_9.MACAGGAAGT	0.379746	0.262901	0.284809	0.341771	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_50.GGGGGAATCCCC	homer_10.ACTTCCKGKT	0.495761	0.343219	0.371821	0.446185	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_50.GGGGGAATCCCC	homer_11.ACVAGGAAGT	0.451921	0.312869	0.338941	0.406729	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_50.GGGGGAATCCCC	homer_12.YCTTATCTBN	0.195777	0.135538	0.146833	0.176199	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_50.GGGGGAATCCCC	homer_13.NBWGATAAGR	0.194768	0.162307	0.162307	0.194768	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_50.GGGGGAATCCCC	homer_14.TGGCAGTTGG	0.233557	0.161693	0.175168	0.210201	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_50.GGGGGAATCCCC	homer_15.AVCCGGAAGT	0.440770	0.305148	0.330577	0.396693	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_50.GGGGGAATCCCC	homer_16.ANCAGGAAGT	0.466386	0.322883	0.349789	0.419747	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_50.GGGGGAATCCCC	homer_17.SAGATAAGRV	0.198300	0.165250	0.165250	0.198300	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_50.GGGGGAATCCCC	homer_18.TGCTGAGTCA	0.345093	0.287577	0.287577	0.345093	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_50.GGGGGAATCCCC	homer_19.GCTATTTTTAGC	0.073642	0.062313	0.067505	0.067505	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_50.GGGGGAATCCCC	homer_20.GGCVGTTR	0.332937	0.221958	0.221958	0.332937	12	8	8	12	0.666667	0.666667	1.000000	R	4	37
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_50.GGGGGAATCCCC	homer_21.CYTGGCABNSTGCCAR	0.399196	0.299397	0.399196	0.299397	12	16	12	16	0.750000	1.000000	0.750000	R	-2	53
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_50.GGGGGAATCCCC	homer_22.BBCTTATCTS	0.192808	0.160673	0.160673	0.192808	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_50.GGGGGAATCCCC	homer_23.VACAGGAAAT	0.418368	0.289639	0.313776	0.376531	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_50.GGGGGAATCCCC	homer_24.RGKGGGCGKGGC	0.484880	0.410283	0.444473	0.444473	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_50.GGGGGAATCCCC	homer_25.AGATAASR	0.250592	0.167062	0.167062	0.250592	12	8	8	12	0.666667	0.666667	1.000000	R	2	37
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_50.GGGGGAATCCCC	homer_26.YGGCCCCGCCCC	0.452288	0.382705	0.414597	0.414597	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_50.GGGGGAATCCCC	homer_27.AVCAGGAAGT	0.501768	0.347378	0.376326	0.451591	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_50.GGGGGAATCCCC	homer_28.RGKGGGCGGAGC	0.525157	0.315094	0.393868	0.393868	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_50.GGGGGAATCCCC	homer_29.AWWWTGCTGAGTCAT	0.272069	0.187048	0.249397	0.199518	12	15	11	16	0.687500	0.916667	0.733333	D	-4	51
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_50.GGGGGAATCCCC	homer_30.CAAAGGTCAG	0.318399	0.181943	0.212266	0.254720	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_50.GGGGGAATCCCC	homer_31.VTGACTCATC	0.341996	0.284996	0.284996	0.341996	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_50.GGGGGAATCCCC	homer_32.AAAGRGGAAGTG	0.480883	0.343488	0.400735	0.400735	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_50.GGGGGAATCCCC	homer_33.GRAASTGAAAST	0.313876	0.188326	0.235407	0.235407	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_50.GGGGGAATCCCC	homer_34.CCCCTCCCCCAC	0.499981	0.357129	0.416651	0.416651	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_50.GGGGGAATCCCC	homer_35.GAAAGTGAAAGT	0.266365	0.190261	0.221971	0.221971	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_50.GGGGGAATCCCC	homer_36.DATGASTCATHN	0.332641	0.332641	0.332641	0.332641	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_50.GGGGGAATCCCC	homer_37.NDATGASTCAYN	0.312358	0.312358	0.312358	0.312358	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_50.GGGGGAATCCCC	homer_38.RATGASTCAT	0.322548	0.268790	0.268790	0.322548	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_50.GGGGGAATCCCC	homer_39.DATGASTCAT	0.295408	0.246174	0.246174	0.295408	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_50.GGGGGAATCCCC	homer_40.AGTTTCAKTTTC	0.276818	0.197727	0.230682	0.230682	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_50.GGGGGAATCCCC	homer_41.NNATGASTCATH	0.295670	0.295670	0.295670	0.295670	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_50.GGGGGAATCCCC	homer_42.SAAACCACAG	0.530260	0.303006	0.353507	0.424208	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_50.GGGGGAATCCCC	homer_43.GAAASYGAAASY	0.267883	0.191345	0.223236	0.223236	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_50.GGGGGAATCCCC	homer_44.AVCAGCTG	0.255713	0.109591	0.127857	0.191785	12	8	6	14	0.428571	0.500000	0.750000	D	6	37
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_50.GGGGGAATCCCC	homer_45.SGTCACGTGR	0.359076	0.134653	0.179538	0.215445	12	10	6	16	0.375000	0.500000	0.600000	D	6	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_50.GGGGGAATCCCC	homer_46.NATGASTCABNN	0.293427	0.293427	0.293427	0.293427	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_50.GGGGGAATCCCC	homer_47.GATGASTCATCN	0.359859	0.359859	0.359859	0.359859	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_50.GGGGGAATCCCC	homer_48.AGTTTCASTTTC	0.281733	0.201238	0.234778	0.234778	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_50.GGGGGAATCCCC	homer_49.RCAGGATGTGGT	0.157560	0.157560	0.157560	0.157560	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_50.GGGGGAATCCCC	homer_50.GGGGGAATCCCC	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_50.GGGGGAATCCCC	homer_51.GCTGTGGTTW	0.533619	0.249022	0.311278	0.373533	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_50.GGGGGAATCCCC	homer_52.GGATGACTCATC	0.362090	0.362090	0.362090	0.362090	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_50.GGGGGAATCCCC	homer_53.NWAACCACADNN	0.478020	0.239010	0.318680	0.318680	12	12	8	16	0.500000	0.666667	0.666667	D	4	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_50.GGGGGAATCCCC	homer_54.ACCATCTGTT	0.300008	0.112503	0.150004	0.180005	12	10	6	16	0.375000	0.500000	0.600000	R	-4	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_50.GGGGGAATCCCC	homer_55.SVYTTCCNGGAARB	0.383753	0.239846	0.319795	0.274110	12	14	10	16	0.625000	0.833333	0.714286	R	-4	49
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_50.GGGGGAATCCCC	homer_56.SCCTAGCAACAG	0.200190	0.142993	0.166825	0.166825	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_50.GGGGGAATCCCC	homer_57.AAACCACARM	0.594446	0.277408	0.346760	0.416112	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_50.GGGGGAATCCCC	homer_58.RTTATGYAAB	0.263526	0.150587	0.175684	0.210821	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_50.GGGGGAATCCCC	homer_59.NYTTCCWGGAAR	0.401888	0.241133	0.301416	0.301416	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_50.GGGGGAATCCCC	homer_60.ASWTCCTGBT	0.409071	0.283203	0.306803	0.368164	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_50.GGGGGAATCCCC	homer_61.DGGGYGKGGC	0.507237	0.351164	0.380428	0.456514	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_50.GGGGGAATCCCC	homer_62.TWGTCTGV	0.167960	0.111973	0.111973	0.167960	12	8	8	12	0.666667	0.666667	1.000000	R	4	37
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_50.GGGGGAATCCCC	homer_63.CTGGCAGSCTGCCA	0.387824	0.332421	0.387824	0.332421	12	14	12	14	0.857143	1.000000	0.857143	D	-2	49
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_50.GGGGGAATCCCC	homer_64.VGGGRATTYCCC	0.854297	0.854297	0.854297	0.854297	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_50.GGGGGAATCCCC	homer_65.CARRGKBCAAAGTYCA	0.310385	0.232789	0.310385	0.232789	12	16	12	16	0.750000	1.000000	0.750000	D	-3	53
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_50.GGGGGAATCCCC	homer_66.CCATTGTTNY	0.203625	0.169688	0.169688	0.203625	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_50.GGGGGAATCCCC	homer_67.CYAAAAATAG	0.654474	0.103338	0.163619	0.196342	12	10	3	19	0.157895	0.250000	0.300000	R	-7	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_50.GGGGGAATCCCC	homer_68.GGGGGGGG	0.499666	0.333111	0.333111	0.499666	12	8	8	12	0.666667	0.666667	1.000000	D	0	37
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_50.GGGGGAATCCCC	homer_69.TTGAMCTTTG	0.372587	0.173874	0.217342	0.260811	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_50.GGGGGAATCCCC	homer_70.MGGAAGTGAAAC	0.339124	0.203475	0.254343	0.254343	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_50.GGGGGAATCCCC	homer_71.HACTTCCGGY	0.427412	0.356177	0.356177	0.427412	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_50.GGGGGAATCCCC	homer_72.NRYTTCCGGY	0.428923	0.357435	0.357435	0.428923	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_50.GGGGGAATCCCC	homer_73.AWWNTGCTGAGTCAT	0.294933	0.202767	0.270356	0.216284	12	15	11	16	0.687500	0.916667	0.733333	D	-4	51
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_50.GGGGGAATCCCC	homer_74.AGGCCTAG	0.305479	0.203653	0.203653	0.305479	12	8	8	12	0.666667	0.666667	1.000000	R	3	37
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_50.GGGGGAATCCCC	homer_75.VTTACGTAAYNNNNN	0.214522	0.171618	0.214522	0.171618	12	15	12	15	0.800000	1.000000	0.800000	D	-2	51
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_50.GGGGGAATCCCC	homer_76.TGCTGACTCA	0.327317	0.226604	0.245487	0.294585	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_50.GGGGGAATCCCC	homer_77.ATTGCGCAAC	0.428605	0.244917	0.285737	0.342884	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_51.GCTGTGGTTW	homer_1.ATTTCCTGTN	0.622401	0.266743	0.373441	0.373441	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_51.GCTGTGGTTW	homer_2.ACCGGAAGTG	0.335318	0.223545	0.268254	0.268254	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_51.GCTGTGGTTW	homer_3.AACCGGAAGT	0.372240	0.304560	0.335016	0.335016	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_51.GCTGTGGTTW	homer_4.ACAGGAAGTG	0.646682	0.215561	0.323341	0.323341	10	10	5	15	0.333333	0.500000	0.500000	R	-5	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_51.GCTGTGGTTW	homer_5.RACCGGAAGT	0.331393	0.271139	0.298253	0.298253	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_51.GCTGTGGTTW	homer_6.AGAGGAAGTG	0.489787	0.209909	0.293872	0.293872	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_51.GCTGTGGTTW	homer_7.NNAYTTCCTGHN	0.413733	0.155150	0.248240	0.206866	10	12	6	16	0.375000	0.600000	0.500000	D	-6	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_51.GCTGTGGTTW	homer_8.NRYTTCCGGH	0.260125	0.173417	0.208100	0.208100	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_51.GCTGTGGTTW	homer_9.MACAGGAAGT	0.711366	0.304871	0.426820	0.426820	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_51.GCTGTGGTTW	homer_10.ACTTCCKGKT	0.219072	0.179241	0.197165	0.197165	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_51.GCTGTGGTTW	homer_11.ACVAGGAAGT	0.282590	0.188394	0.226072	0.226072	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_51.GCTGTGGTTW	homer_12.YCTTATCTBN	0.292446	0.194964	0.233957	0.233957	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_51.GCTGTGGTTW	homer_13.NBWGATAAGR	0.315671	0.210448	0.252537	0.252537	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_51.GCTGTGGTTW	homer_14.TGGCAGTTGG	0.355435	0.290810	0.319891	0.319891	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_51.GCTGTGGTTW	homer_15.AVCCGGAAGT	0.341071	0.279058	0.306964	0.306964	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_51.GCTGTGGTTW	homer_16.ANCAGGAAGT	0.852289	0.150404	0.255687	0.255687	10	10	3	17	0.176471	0.300000	0.300000	R	-7	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_51.GCTGTGGTTW	homer_17.SAGATAAGRV	0.413605	0.177259	0.248163	0.248163	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_51.GCTGTGGTTW	homer_18.TGCTGAGTCA	0.248150	0.203032	0.223335	0.223335	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_51.GCTGTGGTTW	homer_19.GCTATTTTTAGC	0.366538	0.305448	0.366538	0.305448	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_51.GCTGTGGTTW	homer_20.GGCVGTTR	0.442713	0.354170	0.354170	0.442713	10	8	8	10	0.800000	0.800000	1.000000	D	2	33
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_51.GCTGTGGTTW	homer_21.CYTGGCABNSTGCCAR	0.405756	0.180336	0.324605	0.202878	10	16	8	18	0.444444	0.800000	0.500000	D	2	49
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_51.GCTGTGGTTW	homer_22.BBCTTATCTS	0.438263	0.187827	0.262958	0.262958	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_51.GCTGTGGTTW	homer_23.VACAGGAAAT	0.642855	0.275509	0.385713	0.385713	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_51.GCTGTGGTTW	homer_24.RGKGGGCGKGGC	0.437517	0.250010	0.350014	0.291678	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_51.GCTGTGGTTW	homer_25.AGATAASR	0.294912	0.235930	0.235930	0.294912	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_51.GCTGTGGTTW	homer_26.YGGCCCCGCCCC	0.282643	0.235536	0.282643	0.235536	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_51.GCTGTGGTTW	homer_27.AVCAGGAAGT	0.170265	0.139308	0.153238	0.153238	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_51.GCTGTGGTTW	homer_28.RGKGGGCGGAGC	0.401874	0.229642	0.321499	0.267916	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_51.GCTGTGGTTW	homer_29.AWWWTGCTGAGTCAT	0.398295	0.265530	0.398295	0.265530	10	15	10	15	0.666667	1.000000	0.666667	D	0	47
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_51.GCTGTGGTTW	homer_30.CAAAGGTCAG	0.399194	0.326613	0.359274	0.359274	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_51.GCTGTGGTTW	homer_31.VTGACTCATC	0.193002	0.193002	0.193002	0.193002	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_51.GCTGTGGTTW	homer_32.AAAGRGGAAGTG	0.237952	0.198294	0.237952	0.198294	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_51.GCTGTGGTTW	homer_33.GRAASTGAAAST	0.309127	0.257606	0.309127	0.257606	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_51.GCTGTGGTTW	homer_34.CCCCTCCCCCAC	0.376269	0.260494	0.338642	0.282202	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_51.GCTGTGGTTW	homer_35.GAAAGTGAAAGT	0.301336	0.251113	0.301336	0.251113	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_51.GCTGTGGTTW	homer_36.DATGASTCATHN	0.290483	0.201104	0.261435	0.217862	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_51.GCTGTGGTTW	homer_37.NDATGASTCAYN	0.310094	0.214681	0.279085	0.232571	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_51.GCTGTGGTTW	homer_38.RATGASTCAT	0.281327	0.187551	0.225062	0.225062	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_51.GCTGTGGTTW	homer_39.DATGASTCAT	0.289107	0.192738	0.231286	0.231286	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_51.GCTGTGGTTW	homer_40.AGTTTCAKTTTC	0.385780	0.321484	0.385780	0.321484	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_51.GCTGTGGTTW	homer_41.NNATGASTCATH	0.285014	0.197317	0.256512	0.213760	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_51.GCTGTGGTTW	homer_42.SAAACCACAG	0.991582	0.811295	0.892424	0.892424	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_51.GCTGTGGTTW	homer_43.GAAASYGAAASY	0.451426	0.376188	0.451426	0.376188	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_51.GCTGTGGTTW	homer_44.AVCAGCTG	0.625861	0.312931	0.375517	0.469396	10	8	6	12	0.500000	0.600000	0.750000	R	-2	33
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_51.GCTGTGGTTW	homer_45.SGTCACGTGR	0.391656	0.320446	0.352490	0.352490	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_51.GCTGTGGTTW	homer_46.NATGASTCABNN	0.288457	0.199701	0.259611	0.216343	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_51.GCTGTGGTTW	homer_47.GATGASTCATCN	0.276492	0.191418	0.248843	0.207369	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_51.GCTGTGGTTW	homer_48.AGTTTCASTTTC	0.349101	0.290918	0.349101	0.290918	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_51.GCTGTGGTTW	homer_49.RCAGGATGTGGT	0.768398	0.439085	0.614719	0.512266	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_51.GCTGTGGTTW	homer_50.GGGGGAATCCCC	0.533619	0.249022	0.373533	0.311278	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_51.GCTGTGGTTW	homer_51.GCTGTGGTTW	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_51.GCTGTGGTTW	homer_52.GGATGACTCATC	0.248090	0.171755	0.223281	0.186068	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_51.GCTGTGGTTW	homer_53.NWAACCACADNN	0.967117	0.805931	0.967117	0.805931	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_51.GCTGTGGTTW	homer_54.ACCATCTGTT	0.662274	0.283832	0.397365	0.397365	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_51.GCTGTGGTTW	homer_55.SVYTTCCNGGAARB	0.438591	0.115419	0.219295	0.156640	10	14	5	19	0.263158	0.500000	0.357143	R	5	45
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_51.GCTGTGGTTW	homer_56.SCCTAGCAACAG	0.462993	0.320534	0.416694	0.347245	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_51.GCTGTGGTTW	homer_57.AAACCACARM	0.968864	0.968864	0.968864	0.968864	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_51.GCTGTGGTTW	homer_58.RTTATGYAAB	0.378471	0.203792	0.264930	0.264930	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_51.GCTGTGGTTW	homer_59.NYTTCCWGGAAR	0.535625	0.119028	0.214250	0.178542	10	12	4	18	0.222222	0.400000	0.333333	D	6	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_51.GCTGTGGTTW	homer_60.ASWTCCTGBT	0.275410	0.225335	0.247869	0.247869	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_51.GCTGTGGTTW	homer_61.DGGGYGKGGC	0.538827	0.359218	0.431061	0.431061	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_51.GCTGTGGTTW	homer_62.TWGTCTGV	0.647706	0.249118	0.323853	0.404816	10	8	5	13	0.384615	0.500000	0.625000	D	-3	33
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_51.GCTGTGGTTW	homer_63.CTGGCAGSCTGCCA	0.464905	0.191432	0.325434	0.232453	10	14	7	17	0.411765	0.700000	0.500000	D	3	45
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_51.GCTGTGGTTW	homer_64.VGGGRATTYCCC	0.332323	0.230070	0.299090	0.249242	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_51.GCTGTGGTTW	homer_65.CARRGKBCAAAGTYCA	0.458162	0.286351	0.458162	0.286351	10	16	10	16	0.625000	1.000000	0.625000	R	-3	49
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_51.GCTGTGGTTW	homer_66.CCATTGTTNY	0.483013	0.395193	0.434712	0.434712	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_51.GCTGTGGTTW	homer_67.CYAAAAATAG	0.310719	0.254224	0.279647	0.279647	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_51.GCTGTGGTTW	homer_68.GGGGGGGG	0.439798	0.279872	0.307859	0.384823	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_51.GCTGTGGTTW	homer_69.TTGAMCTTTG	0.347944	0.284682	0.313150	0.313150	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_51.GCTGTGGTTW	homer_70.MGGAAGTGAAAC	0.786046	0.174677	0.314419	0.262015	10	12	4	18	0.222222	0.400000	0.333333	R	6	41
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_51.GCTGTGGTTW	homer_71.HACTTCCGGY	0.317290	0.211527	0.253832	0.253832	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_51.GCTGTGGTTW	homer_72.NRYTTCCGGY	0.338202	0.225468	0.270562	0.270562	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_51.GCTGTGGTTW	homer_73.AWWNTGCTGAGTCAT	0.411627	0.274418	0.411627	0.274418	10	15	10	15	0.666667	1.000000	0.666667	D	0	47
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_51.GCTGTGGTTW	homer_74.AGGCCTAG	0.309497	0.154749	0.185698	0.232123	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_51.GCTGTGGTTW	homer_75.VTTACGTAAYNNNNN	0.449783	0.253003	0.404805	0.269870	10	15	9	16	0.562500	0.900000	0.600000	R	1	47
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_51.GCTGTGGTTW	homer_76.TGCTGACTCA	0.297414	0.243339	0.267673	0.267673	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_51.GCTGTGGTTW	homer_77.ATTGCGCAAC	0.218611	0.218611	0.218611	0.218611	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_52.GGATGACTCATC	homer_1.ATTTCCTGTN	0.332004	0.154935	0.193669	0.232403	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_52.GGATGACTCATC	homer_2.ACCGGAAGTG	0.172398	0.143665	0.143665	0.172398	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_52.GGATGACTCATC	homer_3.AACCGGAAGT	0.240634	0.112296	0.140370	0.168444	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_52.GGATGACTCATC	homer_4.ACAGGAAGTG	0.302320	0.141083	0.176353	0.211624	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_52.GGATGACTCATC	homer_5.RACCGGAAGT	0.161443	0.111768	0.121082	0.145299	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_52.GGATGACTCATC	homer_6.AGAGGAAGTG	0.261972	0.218310	0.218310	0.261972	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_52.GGATGACTCATC	homer_7.NNAYTTCCTGHN	0.255758	0.216411	0.234445	0.234445	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_52.GGATGACTCATC	homer_8.NRYTTCCGGH	0.228362	0.190301	0.190301	0.228362	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_52.GGATGACTCATC	homer_9.MACAGGAAGT	0.220238	0.152473	0.165179	0.198214	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_52.GGATGACTCATC	homer_10.ACTTCCKGKT	0.184340	0.153617	0.153617	0.184340	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_52.GGATGACTCATC	homer_11.ACVAGGAAGT	0.250492	0.208744	0.208744	0.250492	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_52.GGATGACTCATC	homer_12.YCTTATCTBN	0.405774	0.231871	0.270516	0.324619	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_52.GGATGACTCATC	homer_13.NBWGATAAGR	0.442025	0.252586	0.294683	0.353620	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_52.GGATGACTCATC	homer_14.TGGCAGTTGG	0.261972	0.149699	0.174648	0.209578	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_52.GGATGACTCATC	homer_15.AVCCGGAAGT	0.296012	0.111005	0.148006	0.177607	12	10	6	16	0.375000	0.500000	0.600000	D	-4	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_52.GGATGACTCATC	homer_16.ANCAGGAAGT	0.263835	0.219863	0.219863	0.263835	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_52.GGATGACTCATC	homer_17.SAGATAAGRV	0.379113	0.262463	0.284335	0.341202	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_52.GGATGACTCATC	homer_18.TGCTGAGTCA	0.901972	0.751644	0.751644	0.901972	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_52.GGATGACTCATC	homer_19.GCTATTTTTAGC	0.128936	0.109100	0.118191	0.118191	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_52.GGATGACTCATC	homer_20.GGCVGTTR	0.453528	0.151176	0.188970	0.283455	12	8	5	15	0.333333	0.416667	0.625000	D	-3	37
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_52.GGATGACTCATC	homer_21.CYTGGCABNSTGCCAR	0.329962	0.213505	0.302466	0.226849	12	16	11	17	0.647059	0.916667	0.687500	D	1	53
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_52.GGATGACTCATC	homer_22.BBCTTATCTS	0.372001	0.257539	0.279001	0.334801	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_52.GGATGACTCATC	homer_23.VACAGGAAAT	0.220833	0.152884	0.165624	0.198749	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_52.GGATGACTCATC	homer_24.RGKGGGCGKGGC	0.351855	0.144882	0.205249	0.205249	12	12	7	17	0.411765	0.583333	0.583333	D	-5	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_52.GGATGACTCATC	homer_25.AGATAASR	0.419725	0.279817	0.279817	0.419725	12	8	8	12	0.666667	0.666667	1.000000	D	0	37
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_52.GGATGACTCATC	homer_26.YGGCCCCGCCCC	0.201382	0.170400	0.184600	0.184600	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_52.GGATGACTCATC	homer_27.AVCAGGAAGT	0.202591	0.168826	0.168826	0.202591	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_52.GGATGACTCATC	homer_28.RGKGGGCGGAGC	0.336357	0.138500	0.196208	0.196208	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_52.GGATGACTCATC	homer_29.AWWWTGCTGAGTCAT	0.803056	0.552101	0.736134	0.588907	12	15	11	16	0.687500	0.916667	0.733333	D	-4	51
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_52.GGATGACTCATC	homer_30.CAAAGGTCAG	0.326444	0.272037	0.272037	0.326444	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_52.GGATGACTCATC	homer_31.VTGACTCATC	0.992955	0.827463	0.827463	0.992955	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_52.GGATGACTCATC	homer_32.AAAGRGGAAGTG	0.205426	0.205426	0.205426	0.205426	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_52.GGATGACTCATC	homer_33.GRAASTGAAAST	0.262206	0.187290	0.218505	0.218505	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_52.GGATGACTCATC	homer_34.CCCCTCCCCCAC	0.210667	0.178256	0.193111	0.193111	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_52.GGATGACTCATC	homer_35.GAAAGTGAAAGT	0.260451	0.186037	0.217043	0.217043	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_52.GGATGACTCATC	homer_36.DATGASTCATHN	0.983192	0.983192	0.983192	0.983192	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_52.GGATGACTCATC	homer_37.NDATGASTCAYN	0.957053	0.957053	0.957053	0.957053	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_52.GGATGACTCATC	homer_38.RATGASTCAT	0.990347	0.825289	0.825289	0.990347	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_52.GGATGACTCATC	homer_39.DATGASTCAT	0.985887	0.821573	0.821573	0.985887	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_52.GGATGACTCATC	homer_40.AGTTTCAKTTTC	0.267041	0.190744	0.222534	0.222534	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_52.GGATGACTCATC	homer_41.NNATGASTCATH	0.969393	0.969393	0.969393	0.969393	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_52.GGATGACTCATC	homer_42.SAAACCACAG	0.195992	0.163327	0.163327	0.195992	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_52.GGATGACTCATC	homer_43.GAAASYGAAASY	0.167554	0.119682	0.139628	0.139628	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_52.GGATGACTCATC	homer_44.AVCAGCTG	0.473857	0.255154	0.276417	0.414625	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_52.GGATGACTCATC	homer_45.SGTCACGTGR	0.469975	0.268557	0.313316	0.375980	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_52.GGATGACTCATC	homer_46.NATGASTCABNN	0.977516	0.977516	0.977516	0.977516	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_52.GGATGACTCATC	homer_47.GATGASTCATCN	0.988239	0.988239	0.988239	0.988239	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_52.GGATGACTCATC	homer_48.AGTTTCASTTTC	0.301532	0.215380	0.251277	0.251277	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_52.GGATGACTCATC	homer_49.RCAGGATGTGGT	0.312573	0.156286	0.208382	0.208382	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_52.GGATGACTCATC	homer_50.GGGGGAATCCCC	0.362090	0.362090	0.362090	0.362090	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_52.GGATGACTCATC	homer_51.GCTGTGGTTW	0.248090	0.171755	0.186068	0.223281	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_52.GGATGACTCATC	homer_52.GGATGACTCATC	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_52.GGATGACTCATC	homer_53.NWAACCACADNN	0.222017	0.187861	0.203516	0.203516	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_52.GGATGACTCATC	homer_54.ACCATCTGTT	0.526553	0.245725	0.307156	0.368587	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_52.GGATGACTCATC	homer_55.SVYTTCCNGGAARB	0.200782	0.089237	0.133855	0.114733	12	14	8	18	0.444444	0.666667	0.571429	D	4	49
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_52.GGATGACTCATC	homer_56.SCCTAGCAACAG	0.171116	0.171116	0.171116	0.171116	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_52.GGATGACTCATC	homer_57.AAACCACARM	0.296361	0.205173	0.222271	0.266725	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_52.GGATGACTCATC	homer_58.RTTATGYAAB	0.350275	0.291896	0.291896	0.350275	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_52.GGATGACTCATC	homer_59.NYTTCCWGGAAR	0.197869	0.098934	0.131912	0.131912	12	12	8	16	0.500000	0.666667	0.666667	D	4	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_52.GGATGACTCATC	homer_60.ASWTCCTGBT	0.263413	0.182363	0.197560	0.237072	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_52.GGATGACTCATC	homer_61.DGGGYGKGGC	0.359353	0.248783	0.269514	0.323417	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_52.GGATGACTCATC	homer_62.TWGTCTGV	0.391170	0.260780	0.260780	0.391170	12	8	8	12	0.666667	0.666667	1.000000	D	2	37
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_52.GGATGACTCATC	homer_63.CTGGCAGSCTGCCA	0.276311	0.172694	0.230259	0.197365	12	14	10	16	0.625000	0.833333	0.714286	D	2	49
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_52.GGATGACTCATC	homer_64.VGGGRATTYCCC	0.190382	0.190382	0.190382	0.190382	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_52.GGATGACTCATC	homer_65.CARRGKBCAAAGTYCA	0.234984	0.176238	0.234984	0.176238	12	16	12	16	0.750000	1.000000	0.750000	R	-4	53
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_52.GGATGACTCATC	homer_66.CCATTGTTNY	0.247076	0.171053	0.185307	0.222369	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_52.GGATGACTCATC	homer_67.CYAAAAATAG	0.286112	0.107292	0.143056	0.171667	12	10	6	16	0.375000	0.500000	0.600000	R	6	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_52.GGATGACTCATC	homer_68.GGGGGGGG	0.342895	0.114298	0.142873	0.214310	12	8	5	15	0.333333	0.416667	0.625000	D	-3	37
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_52.GGATGACTCATC	homer_69.TTGAMCTTTG	0.398294	0.331912	0.331912	0.398294	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_52.GGATGACTCATC	homer_70.MGGAAGTGAAAC	0.429232	0.257539	0.321924	0.321924	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_52.GGATGACTCATC	homer_71.HACTTCCGGY	0.173556	0.144630	0.144630	0.173556	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_52.GGATGACTCATC	homer_72.NRYTTCCGGY	0.191218	0.159349	0.159349	0.191218	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_52.GGATGACTCATC	homer_73.AWWNTGCTGAGTCAT	0.812268	0.558434	0.744579	0.595663	12	15	11	16	0.687500	0.916667	0.733333	D	-4	51
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_52.GGATGACTCATC	homer_74.AGGCCTAG	0.305048	0.203366	0.203366	0.305048	12	8	8	12	0.666667	0.666667	1.000000	R	0	37
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_52.GGATGACTCATC	homer_75.VTTACGTAAYNNNNN	0.385872	0.308697	0.385872	0.308697	12	15	12	15	0.800000	1.000000	0.800000	R	-3	51
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_52.GGATGACTCATC	homer_76.TGCTGACTCA	0.731137	0.609281	0.609281	0.731137	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_52.GGATGACTCATC	homer_77.ATTGCGCAAC	0.362014	0.301679	0.301679	0.362014	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_53.NWAACCACADNN	homer_1.ATTTCCTGTN	0.481120	0.224523	0.280653	0.336784	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_53.NWAACCACADNN	homer_2.ACCGGAAGTG	0.363278	0.251500	0.272459	0.326951	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_53.NWAACCACADNN	homer_3.AACCGGAAGT	0.379554	0.316295	0.316295	0.379554	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_53.NWAACCACADNN	homer_4.ACAGGAAGTG	0.419035	0.195550	0.244437	0.293325	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_53.NWAACCACADNN	homer_5.RACCGGAAGT	0.344441	0.287034	0.287034	0.344441	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_53.NWAACCACADNN	homer_6.AGAGGAAGTG	0.437885	0.204346	0.255433	0.306519	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_53.NWAACCACADNN	homer_7.NNAYTTCCTGHN	0.248763	0.177688	0.207303	0.207303	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_53.NWAACCACADNN	homer_8.NRYTTCCGGH	0.283462	0.196243	0.212597	0.255116	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_53.NWAACCACADNN	homer_9.MACAGGAAGT	0.588046	0.274421	0.343027	0.411632	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_53.NWAACCACADNN	homer_10.ACTTCCKGKT	0.223265	0.186054	0.186054	0.223265	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_53.NWAACCACADNN	homer_11.ACVAGGAAGT	0.247116	0.171080	0.185337	0.222404	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_53.NWAACCACADNN	homer_12.YCTTATCTBN	0.251767	0.174300	0.188825	0.226590	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_53.NWAACCACADNN	homer_13.NBWGATAAGR	0.267339	0.185081	0.200504	0.240605	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_53.NWAACCACADNN	homer_14.TGGCAGTTGG	0.313213	0.261011	0.261011	0.313213	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_53.NWAACCACADNN	homer_15.AVCCGGAAGT	0.358514	0.298761	0.298761	0.358514	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_53.NWAACCACADNN	homer_16.ANCAGGAAGT	0.220569	0.152702	0.165427	0.198512	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_53.NWAACCACADNN	homer_17.SAGATAAGRV	0.192407	0.160339	0.160339	0.192407	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_53.NWAACCACADNN	homer_18.TGCTGAGTCA	0.401424	0.187331	0.234164	0.280997	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_53.NWAACCACADNN	homer_19.GCTATTTTTAGC	0.269197	0.227782	0.246764	0.246764	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_53.NWAACCACADNN	homer_20.GGCVGTTR	0.382583	0.255056	0.255056	0.382583	12	8	8	12	0.666667	0.666667	1.000000	R	1	37
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_53.NWAACCACADNN	homer_21.CYTGGCABNSTGCCAR	0.466120	0.220794	0.349590	0.262192	12	16	9	19	0.473684	0.750000	0.562500	R	-7	53
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_53.NWAACCACADNN	homer_22.BBCTTATCTS	0.211215	0.176012	0.176012	0.211215	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_53.NWAACCACADNN	homer_23.VACAGGAAAT	0.303427	0.252856	0.252856	0.303427	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_53.NWAACCACADNN	homer_24.RGKGGGCGKGGC	0.485335	0.291201	0.364001	0.364001	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_53.NWAACCACADNN	homer_25.AGATAASR	0.280239	0.186826	0.186826	0.280239	12	8	8	12	0.666667	0.666667	1.000000	D	1	37
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_53.NWAACCACADNN	homer_26.YGGCCCCGCCCC	0.304618	0.257753	0.279233	0.279233	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_53.NWAACCACADNN	homer_27.AVCAGGAAGT	0.181984	0.151653	0.151653	0.181984	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_53.NWAACCACADNN	homer_28.RGKGGGCGGAGC	0.462204	0.277322	0.346653	0.346653	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_53.NWAACCACADNN	homer_29.AWWWTGCTGAGTCAT	0.382065	0.262670	0.350226	0.280181	12	15	11	16	0.687500	0.916667	0.733333	R	-4	51
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_53.NWAACCACADNN	homer_30.CAAAGGTCAG	0.336713	0.280594	0.280594	0.336713	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_53.NWAACCACADNN	homer_31.VTGACTCATC	0.223501	0.186251	0.186251	0.223501	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_53.NWAACCACADNN	homer_32.AAAGRGGAAGTG	0.202527	0.171369	0.185650	0.185650	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_53.NWAACCACADNN	homer_33.GRAASTGAAAST	0.279244	0.236283	0.255973	0.255973	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_53.NWAACCACADNN	homer_34.CCCCTCCCCCAC	0.443278	0.316627	0.369398	0.369398	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_53.NWAACCACADNN	homer_35.GAAAGTGAAAGT	0.227620	0.227620	0.227620	0.227620	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_53.NWAACCACADNN	homer_36.DATGASTCATHN	0.184807	0.184807	0.184807	0.184807	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_53.NWAACCACADNN	homer_37.NDATGASTCAYN	0.249564	0.178260	0.207970	0.207970	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_53.NWAACCACADNN	homer_38.RATGASTCAT	0.202594	0.168828	0.168828	0.202594	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_53.NWAACCACADNN	homer_39.DATGASTCAT	0.244393	0.169195	0.183295	0.219954	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_53.NWAACCACADNN	homer_40.AGTTTCAKTTTC	0.301834	0.301834	0.301834	0.301834	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_53.NWAACCACADNN	homer_41.NNATGASTCATH	0.232210	0.165864	0.193508	0.193508	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_53.NWAACCACADNN	homer_42.SAAACCACAG	0.968572	0.807144	0.807144	0.968572	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_53.NWAACCACADNN	homer_43.GAAASYGAAASY	0.381191	0.381191	0.381191	0.381191	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_53.NWAACCACADNN	homer_44.AVCAGCTG	0.460507	0.247965	0.268629	0.402944	12	8	7	13	0.538462	0.583333	0.875000	D	5	37
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_53.NWAACCACADNN	homer_45.SGTCACGTGR	0.439826	0.366522	0.366522	0.439826	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_53.NWAACCACADNN	homer_46.NATGASTCABNN	0.229050	0.193812	0.209963	0.209963	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_53.NWAACCACADNN	homer_47.GATGASTCATCN	0.197838	0.197838	0.197838	0.197838	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_53.NWAACCACADNN	homer_48.AGTTTCASTTTC	0.258786	0.258786	0.258786	0.258786	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_53.NWAACCACADNN	homer_49.RCAGGATGTGGT	0.725289	0.435173	0.543967	0.543967	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_53.NWAACCACADNN	homer_50.GGGGGAATCCCC	0.478020	0.239010	0.318680	0.318680	12	12	8	16	0.500000	0.666667	0.666667	D	-4	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_53.NWAACCACADNN	homer_51.GCTGTGGTTW	0.967117	0.805931	0.805931	0.967117	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_53.NWAACCACADNN	homer_52.GGATGACTCATC	0.222017	0.187861	0.203516	0.203516	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_53.NWAACCACADNN	homer_53.NWAACCACADNN	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_53.NWAACCACADNN	homer_54.ACCATCTGTT	0.421931	0.292106	0.316448	0.379738	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_53.NWAACCACADNN	homer_55.SVYTTCCNGGAARB	0.182198	0.156170	0.182198	0.156170	12	14	12	14	0.857143	1.000000	0.857143	D	-2	49
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_53.NWAACCACADNN	homer_56.SCCTAGCAACAG	0.464793	0.331995	0.387327	0.387327	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_53.NWAACCACADNN	homer_57.AAACCACARM	0.958817	0.799014	0.799014	0.958817	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_53.NWAACCACADNN	homer_58.RTTATGYAAB	0.242205	0.201838	0.201838	0.242205	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_53.NWAACCACADNN	homer_59.NYTTCCWGGAAR	0.155787	0.155787	0.155787	0.155787	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_53.NWAACCACADNN	homer_60.ASWTCCTGBT	0.279380	0.232816	0.232816	0.279380	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_53.NWAACCACADNN	homer_61.DGGGYGKGGC	0.517785	0.358467	0.388339	0.466007	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_53.NWAACCACADNN	homer_62.TWGTCTGV	0.392752	0.261835	0.261835	0.392752	12	8	8	12	0.666667	0.666667	1.000000	R	4	37
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_53.NWAACCACADNN	homer_63.CTGGCAGSCTGCCA	0.536249	0.238333	0.357499	0.306428	12	14	8	18	0.444444	0.666667	0.571429	R	-6	49
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_53.NWAACCACADNN	homer_64.VGGGRATTYCCC	0.427058	0.213529	0.284705	0.284705	12	12	8	16	0.500000	0.666667	0.666667	R	-4	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_53.NWAACCACADNN	homer_65.CARRGKBCAAAGTYCA	0.459496	0.344622	0.459496	0.344622	12	16	12	16	0.750000	1.000000	0.750000	D	-2	53
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_53.NWAACCACADNN	homer_66.CCATTGTTNY	0.611715	0.423495	0.458786	0.550543	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_53.NWAACCACADNN	homer_67.CYAAAAATAG	0.419745	0.239854	0.279830	0.335796	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_53.NWAACCACADNN	homer_68.GGGGGGGG	0.381038	0.254025	0.254025	0.381038	12	8	8	12	0.666667	0.666667	1.000000	R	4	37
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_53.NWAACCACADNN	homer_69.TTGAMCTTTG	0.325559	0.271299	0.271299	0.325559	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_53.NWAACCACADNN	homer_70.MGGAAGTGAAAC	0.553700	0.145711	0.230708	0.230708	12	12	5	19	0.263158	0.416667	0.416667	D	-7	45
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_53.NWAACCACADNN	homer_71.HACTTCCGGY	0.345083	0.238903	0.258812	0.310574	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_53.NWAACCACADNN	homer_72.NRYTTCCGGY	0.370244	0.256323	0.277683	0.333219	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_53.NWAACCACADNN	homer_73.AWWNTGCTGAGTCAT	0.394740	0.271384	0.361845	0.289476	12	15	11	16	0.687500	0.916667	0.733333	R	-4	51
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_53.NWAACCACADNN	homer_74.AGGCCTAG	0.376808	0.202896	0.219805	0.329707	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_53.NWAACCACADNN	homer_75.VTTACGTAAYNNNNN	0.318696	0.254957	0.318696	0.254957	12	15	12	15	0.800000	1.000000	0.800000	D	-2	51
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_53.NWAACCACADNN	homer_76.TGCTGACTCA	0.304581	0.210863	0.228435	0.274123	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_53.NWAACCACADNN	homer_77.ATTGCGCAAC	0.675465	0.198666	0.281444	0.337732	12	10	5	17	0.294118	0.416667	0.500000	D	-5	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_54.ACCATCTGTT	homer_1.ATTTCCTGTN	0.277373	0.277373	0.277373	0.277373	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_54.ACCATCTGTT	homer_2.ACCGGAAGTG	0.402135	0.402135	0.402135	0.402135	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_54.ACCATCTGTT	homer_3.AACCGGAAGT	0.420700	0.344209	0.378630	0.378630	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_54.ACCATCTGTT	homer_4.ACAGGAAGTG	0.311052	0.311052	0.311052	0.311052	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_54.ACCATCTGTT	homer_5.RACCGGAAGT	0.386244	0.316018	0.347619	0.347619	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_54.ACCATCTGTT	homer_6.AGAGGAAGTG	0.232252	0.232252	0.232252	0.232252	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_54.ACCATCTGTT	homer_7.NNAYTTCCTGHN	0.344853	0.287378	0.344853	0.287378	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_54.ACCATCTGTT	homer_8.NRYTTCCGGH	0.380261	0.380261	0.380261	0.380261	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_54.ACCATCTGTT	homer_9.MACAGGAAGT	0.423173	0.423173	0.423173	0.423173	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_54.ACCATCTGTT	homer_10.ACTTCCKGKT	0.334958	0.274057	0.301462	0.301462	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_54.ACCATCTGTT	homer_11.ACVAGGAAGT	0.295547	0.241811	0.265992	0.265992	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_54.ACCATCTGTT	homer_12.YCTTATCTBN	0.433284	0.354505	0.389955	0.389955	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_54.ACCATCTGTT	homer_13.NBWGATAAGR	0.431417	0.352978	0.388276	0.388276	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_54.ACCATCTGTT	homer_14.TGGCAGTTGG	0.671089	0.549072	0.603980	0.603980	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_54.ACCATCTGTT	homer_15.AVCCGGAAGT	0.411645	0.336800	0.370480	0.370480	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_54.ACCATCTGTT	homer_16.ANCAGGAAGT	0.302807	0.302807	0.302807	0.302807	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_54.ACCATCTGTT	homer_17.SAGATAAGRV	0.462884	0.308589	0.370307	0.370307	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_54.ACCATCTGTT	homer_18.TGCTGAGTCA	0.466140	0.250998	0.326298	0.326298	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_54.ACCATCTGTT	homer_19.GCTATTTTTAGC	0.316331	0.263609	0.316331	0.263609	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_54.ACCATCTGTT	homer_20.GGCVGTTR	0.539835	0.431868	0.431868	0.539835	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_54.ACCATCTGTT	homer_21.CYTGGCABNSTGCCAR	0.288508	0.180317	0.288508	0.180317	10	16	10	16	0.625000	1.000000	0.625000	D	-4	49
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_54.ACCATCTGTT	homer_22.BBCTTATCTS	0.448756	0.299171	0.359005	0.359005	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_54.ACCATCTGTT	homer_23.VACAGGAAAT	0.331879	0.331879	0.331879	0.331879	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_54.ACCATCTGTT	homer_24.RGKGGGCGKGGC	0.399410	0.186391	0.279587	0.232989	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_54.ACCATCTGTT	homer_25.AGATAASR	0.557830	0.354982	0.390481	0.488101	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_54.ACCATCTGTT	homer_26.YGGCCCCGCCCC	0.468842	0.137895	0.234421	0.195351	10	12	5	17	0.294118	0.500000	0.416667	D	5	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_54.ACCATCTGTT	homer_27.AVCAGGAAGT	0.288870	0.236348	0.259983	0.259983	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_54.ACCATCTGTT	homer_28.RGKGGGCGGAGC	0.428748	0.200082	0.300123	0.250103	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_54.ACCATCTGTT	homer_29.AWWWTGCTGAGTCAT	0.513706	0.241744	0.410965	0.273976	10	15	8	17	0.470588	0.800000	0.533333	D	2	47
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_54.ACCATCTGTT	homer_30.CAAAGGTCAG	0.428148	0.285432	0.342519	0.342519	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_54.ACCATCTGTT	homer_31.VTGACTCATC	0.573475	0.245775	0.344085	0.344085	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_54.ACCATCTGTT	homer_32.AAAGRGGAAGTG	0.319008	0.265840	0.319008	0.265840	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_54.ACCATCTGTT	homer_33.GRAASTGAAAST	0.318078	0.265065	0.318078	0.265065	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_54.ACCATCTGTT	homer_34.CCCCTCCCCCAC	0.277970	0.231642	0.277970	0.231642	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_54.ACCATCTGTT	homer_35.GAAAGTGAAAGT	0.332342	0.276951	0.332342	0.276951	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_54.ACCATCTGTT	homer_36.DATGASTCATHN	0.478286	0.223200	0.334800	0.279000	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_54.ACCATCTGTT	homer_37.NDATGASTCAYN	0.441692	0.206123	0.309184	0.257654	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_54.ACCATCTGTT	homer_38.RATGASTCAT	0.565601	0.242400	0.339361	0.339361	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_54.ACCATCTGTT	homer_39.DATGASTCAT	0.528734	0.226600	0.317241	0.317241	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_54.ACCATCTGTT	homer_40.AGTTTCAKTTTC	0.283104	0.235920	0.283104	0.235920	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_54.ACCATCTGTT	homer_41.NNATGASTCATH	0.547857	0.205447	0.328714	0.273929	10	12	6	16	0.375000	0.600000	0.500000	D	-6	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_54.ACCATCTGTT	homer_42.SAAACCACAG	0.449953	0.242283	0.314967	0.314967	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_54.ACCATCTGTT	homer_43.GAAASYGAAASY	0.294382	0.245318	0.294382	0.245318	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_54.ACCATCTGTT	homer_44.AVCAGCTG	0.858001	0.686401	0.686401	0.858001	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_54.ACCATCTGTT	homer_45.SGTCACGTGR	0.536293	0.438785	0.482664	0.482664	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_54.ACCATCTGTT	homer_46.NATGASTCABNN	0.463170	0.216146	0.324219	0.270183	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_54.ACCATCTGTT	homer_47.GATGASTCATCN	0.495190	0.231089	0.346633	0.288861	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_54.ACCATCTGTT	homer_48.AGTTTCASTTTC	0.336482	0.280401	0.336482	0.280401	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_54.ACCATCTGTT	homer_49.RCAGGATGTGGT	0.433436	0.361197	0.433436	0.361197	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_54.ACCATCTGTT	homer_50.GGGGGAATCCCC	0.300008	0.112503	0.180005	0.150004	10	12	6	16	0.375000	0.600000	0.500000	R	-6	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_54.ACCATCTGTT	homer_51.GCTGTGGTTW	0.662274	0.283832	0.397365	0.397365	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_54.ACCATCTGTT	homer_52.GGATGACTCATC	0.526553	0.245725	0.368587	0.307156	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_54.ACCATCTGTT	homer_53.NWAACCACADNN	0.421931	0.292106	0.379738	0.316448	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_54.ACCATCTGTT	homer_54.ACCATCTGTT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_54.ACCATCTGTT	homer_55.SVYTTCCNGGAARB	0.317302	0.105767	0.190381	0.135986	10	14	6	18	0.333333	0.600000	0.428571	R	4	45
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_54.ACCATCTGTT	homer_56.SCCTAGCAACAG	0.429903	0.245659	0.343923	0.286602	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_54.ACCATCTGTT	homer_57.AAACCACARM	0.402714	0.268476	0.322171	0.322171	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_54.ACCATCTGTT	homer_58.RTTATGYAAB	0.254693	0.169795	0.203754	0.203754	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_54.ACCATCTGTT	homer_59.NYTTCCWGGAAR	0.148188	0.102592	0.133369	0.111141	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_54.ACCATCTGTT	homer_60.ASWTCCTGBT	0.327069	0.327069	0.327069	0.327069	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_54.ACCATCTGTT	homer_61.DGGGYGKGGC	0.261889	0.174593	0.209511	0.209511	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_54.ACCATCTGTT	homer_62.TWGTCTGV	0.419054	0.335243	0.335243	0.419054	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_54.ACCATCTGTT	homer_63.CTGGCAGSCTGCCA	0.289233	0.206595	0.289233	0.206595	10	14	10	14	0.714286	1.000000	0.714286	D	-3	45
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_54.ACCATCTGTT	homer_64.VGGGRATTYCCC	0.488263	0.143607	0.244131	0.203443	10	12	5	17	0.294118	0.500000	0.416667	R	-7	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_54.ACCATCTGTT	homer_65.CARRGKBCAAAGTYCA	0.348676	0.217923	0.348676	0.217923	10	16	10	16	0.625000	1.000000	0.625000	R	-1	49
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_54.ACCATCTGTT	homer_66.CCATTGTTNY	0.502508	0.335005	0.402006	0.402006	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_54.ACCATCTGTT	homer_67.CYAAAAATAG	0.341730	0.279597	0.307557	0.307557	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_54.ACCATCTGTT	homer_68.GGGGGGGG	0.262808	0.167241	0.183965	0.229957	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_54.ACCATCTGTT	homer_69.TTGAMCTTTG	0.184352	0.184352	0.184352	0.184352	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_54.ACCATCTGTT	homer_70.MGGAAGTGAAAC	0.268194	0.223495	0.268194	0.223495	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_54.ACCATCTGTT	homer_71.HACTTCCGGY	0.394107	0.394107	0.394107	0.394107	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_54.ACCATCTGTT	homer_72.NRYTTCCGGY	0.386753	0.386753	0.386753	0.386753	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_54.ACCATCTGTT	homer_73.AWWNTGCTGAGTCAT	0.366983	0.244656	0.366983	0.244656	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_54.ACCATCTGTT	homer_74.AGGCCTAG	0.478983	0.136852	0.191593	0.239491	10	8	4	14	0.285714	0.400000	0.500000	R	-4	33
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_54.ACCATCTGTT	homer_75.VTTACGTAAYNNNNN	0.352669	0.235112	0.352669	0.235112	10	15	10	15	0.666667	1.000000	0.666667	D	-5	47
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_54.ACCATCTGTT	homer_76.TGCTGACTCA	0.232907	0.232907	0.232907	0.232907	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_54.ACCATCTGTT	homer_77.ATTGCGCAAC	0.567301	0.189100	0.283650	0.283650	10	10	5	15	0.333333	0.500000	0.500000	R	-5	37
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_55.SVYTTCCNGGAARB	homer_1.ATTTCCTGTN	0.675986	0.482847	0.482847	0.675986	14	10	10	14	0.714286	0.714286	1.000000	D	1	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_55.SVYTTCCNGGAARB	homer_2.ACCGGAAGTG	0.783777	0.559841	0.559841	0.783777	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_55.SVYTTCCNGGAARB	homer_3.AACCGGAAGT	0.675288	0.482349	0.482349	0.675288	14	10	10	14	0.714286	0.714286	1.000000	D	4	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_55.SVYTTCCNGGAARB	homer_4.ACAGGAAGTG	0.740850	0.529179	0.529179	0.740850	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_55.SVYTTCCNGGAARB	homer_5.RACCGGAAGT	0.700664	0.500475	0.500475	0.700664	14	10	10	14	0.714286	0.714286	1.000000	D	4	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_55.SVYTTCCNGGAARB	homer_6.AGAGGAAGTG	0.600381	0.428843	0.428843	0.600381	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_55.SVYTTCCNGGAARB	homer_7.NNAYTTCCTGHN	0.697138	0.511234	0.547751	0.639043	14	12	11	15	0.733333	0.785714	0.916667	D	-1	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_55.SVYTTCCNGGAARB	homer_8.NRYTTCCGGH	0.750363	0.535974	0.535974	0.750363	14	10	10	14	0.714286	0.714286	1.000000	D	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_55.SVYTTCCNGGAARB	homer_9.MACAGGAAGT	0.614169	0.438692	0.438692	0.614169	14	10	10	14	0.714286	0.714286	1.000000	D	4	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_55.SVYTTCCNGGAARB	homer_10.ACTTCCKGKT	0.721256	0.515183	0.515183	0.721256	14	10	10	14	0.714286	0.714286	1.000000	R	4	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_55.SVYTTCCNGGAARB	homer_11.ACVAGGAAGT	0.631477	0.451055	0.451055	0.631477	14	10	10	14	0.714286	0.714286	1.000000	R	1	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_55.SVYTTCCNGGAARB	homer_12.YCTTATCTBN	0.272159	0.194399	0.194399	0.272159	14	10	10	14	0.714286	0.714286	1.000000	R	4	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_55.SVYTTCCNGGAARB	homer_13.NBWGATAAGR	0.257867	0.184190	0.184190	0.257867	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_55.SVYTTCCNGGAARB	homer_14.TGGCAGTTGG	0.365253	0.182626	0.208716	0.292202	14	10	8	16	0.500000	0.571429	0.800000	R	-2	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_55.SVYTTCCNGGAARB	homer_15.AVCCGGAAGT	0.705630	0.504021	0.504021	0.705630	14	10	10	14	0.714286	0.714286	1.000000	D	4	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_55.SVYTTCCNGGAARB	homer_16.ANCAGGAAGT	0.661892	0.472780	0.472780	0.661892	14	10	10	14	0.714286	0.714286	1.000000	R	1	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_55.SVYTTCCNGGAARB	homer_17.SAGATAAGRV	0.321406	0.229575	0.229575	0.321406	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_55.SVYTTCCNGGAARB	homer_18.TGCTGAGTCA	0.766234	0.069658	0.109462	0.153247	14	10	2	22	0.090909	0.142857	0.200000	R	-8	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_55.SVYTTCCNGGAARB	homer_19.GCTATTTTTAGC	0.307394	0.225422	0.241524	0.281778	14	12	11	15	0.733333	0.785714	0.916667	D	-1	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_55.SVYTTCCNGGAARB	homer_20.GGCVGTTR	0.505221	0.189458	0.216523	0.378915	14	8	6	16	0.375000	0.428571	0.750000	D	-2	41
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_55.SVYTTCCNGGAARB	homer_21.CYTGGCABNSTGCCAR	0.618763	0.309382	0.441974	0.386727	14	16	10	20	0.500000	0.714286	0.625000	R	-6	57
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_55.SVYTTCCNGGAARB	homer_22.BBCTTATCTS	0.305208	0.218006	0.218006	0.305208	14	10	10	14	0.714286	0.714286	1.000000	D	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_55.SVYTTCCNGGAARB	homer_23.VACAGGAAAT	0.712011	0.508579	0.508579	0.712011	14	10	10	14	0.714286	0.714286	1.000000	D	4	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_55.SVYTTCCNGGAARB	homer_24.RGKGGGCGKGGC	0.184132	0.115082	0.131523	0.153443	14	12	10	16	0.625000	0.714286	0.833333	R	-2	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_55.SVYTTCCNGGAARB	homer_25.AGATAASR	0.281284	0.160733	0.160733	0.281284	14	8	8	14	0.571429	0.571429	1.000000	R	0	41
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_55.SVYTTCCNGGAARB	homer_26.YGGCCCCGCCCC	0.251010	0.111560	0.143434	0.167340	14	12	8	18	0.444444	0.571429	0.666667	D	-4	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_55.SVYTTCCNGGAARB	homer_27.AVCAGGAAGT	0.739777	0.528412	0.528412	0.739777	14	10	10	14	0.714286	0.714286	1.000000	R	1	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_55.SVYTTCCNGGAARB	homer_28.RGKGGGCGGAGC	0.141683	0.121442	0.121442	0.141683	14	12	12	14	0.857143	0.857143	1.000000	D	1	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_55.SVYTTCCNGGAARB	homer_29.AWWWTGCTGAGTCAT	0.164732	0.153750	0.164732	0.153750	14	15	14	15	0.933333	1.000000	0.933333	D	-1	55
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_55.SVYTTCCNGGAARB	homer_30.CAAAGGTCAG	0.329262	0.109754	0.141112	0.197557	14	10	6	18	0.333333	0.428571	0.600000	R	-4	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_55.SVYTTCCNGGAARB	homer_31.VTGACTCATC	0.182409	0.091204	0.104234	0.145927	14	10	8	16	0.500000	0.571429	0.800000	D	-2	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_55.SVYTTCCNGGAARB	homer_32.AAAGRGGAAGTG	0.453601	0.388801	0.388801	0.453601	14	12	12	14	0.857143	0.857143	1.000000	R	0	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_55.SVYTTCCNGGAARB	homer_33.GRAASTGAAAST	0.814695	0.300151	0.407348	0.475239	14	12	7	19	0.368421	0.500000	0.583333	R	-5	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_55.SVYTTCCNGGAARB	homer_34.CCCCTCCCCCAC	0.242954	0.208247	0.208247	0.242954	14	12	12	14	0.857143	0.857143	1.000000	D	0	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_55.SVYTTCCNGGAARB	homer_35.GAAAGTGAAAGT	0.644539	0.237462	0.322269	0.375981	14	12	7	19	0.368421	0.500000	0.583333	R	-5	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_55.SVYTTCCNGGAARB	homer_36.DATGASTCATHN	0.193080	0.102219	0.124123	0.144810	14	12	9	17	0.529412	0.642857	0.750000	D	-3	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_55.SVYTTCCNGGAARB	homer_37.NDATGASTCAYN	0.223213	0.099206	0.127550	0.148808	14	12	8	18	0.444444	0.571429	0.666667	D	-4	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_55.SVYTTCCNGGAARB	homer_38.RATGASTCAT	0.186481	0.093240	0.106560	0.149184	14	10	8	16	0.500000	0.571429	0.800000	R	-2	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_55.SVYTTCCNGGAARB	homer_39.DATGASTCAT	0.193517	0.096758	0.110581	0.154813	14	10	8	16	0.500000	0.571429	0.800000	R	-2	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_55.SVYTTCCNGGAARB	homer_40.AGTTTCAKTTTC	0.762950	0.281087	0.381475	0.445054	14	12	7	19	0.368421	0.500000	0.583333	D	-5	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_55.SVYTTCCNGGAARB	homer_41.NNATGASTCATH	0.193501	0.102441	0.124393	0.145125	14	12	9	17	0.529412	0.642857	0.750000	R	-3	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_55.SVYTTCCNGGAARB	homer_42.SAAACCACAG	0.417226	0.139075	0.178811	0.250336	14	10	6	18	0.333333	0.428571	0.600000	R	-4	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_55.SVYTTCCNGGAARB	homer_43.GAAASYGAAASY	0.669799	0.246768	0.334899	0.390716	14	12	7	19	0.368421	0.500000	0.583333	R	-5	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_55.SVYTTCCNGGAARB	homer_44.AVCAGCTG	0.192591	0.110052	0.110052	0.192591	14	8	8	14	0.571429	0.571429	1.000000	D	0	41
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_55.SVYTTCCNGGAARB	homer_45.SGTCACGTGR	0.202056	0.144325	0.144325	0.202056	14	10	10	14	0.714286	0.714286	1.000000	D	1	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_55.SVYTTCCNGGAARB	homer_46.NATGASTCABNN	0.183101	0.081378	0.104629	0.122067	14	12	8	18	0.444444	0.571429	0.666667	R	-4	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_55.SVYTTCCNGGAARB	homer_47.GATGASTCATCN	0.206171	0.091632	0.117812	0.137448	14	12	8	18	0.444444	0.571429	0.666667	R	-4	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_55.SVYTTCCNGGAARB	homer_48.AGTTTCASTTTC	0.789260	0.236778	0.338254	0.394630	14	12	6	20	0.300000	0.428571	0.500000	D	-6	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_55.SVYTTCCNGGAARB	homer_49.RCAGGATGTGGT	0.558136	0.348835	0.398669	0.465113	14	12	10	16	0.625000	0.714286	0.833333	R	-2	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_55.SVYTTCCNGGAARB	homer_50.GGGGGAATCCCC	0.383753	0.239846	0.274110	0.319795	14	12	10	16	0.625000	0.714286	0.833333	R	-2	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_55.SVYTTCCNGGAARB	homer_51.GCTGTGGTTW	0.438591	0.115419	0.156640	0.219295	14	10	5	19	0.263158	0.357143	0.500000	R	9	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_55.SVYTTCCNGGAARB	homer_52.GGATGACTCATC	0.200782	0.089237	0.114733	0.133855	14	12	8	18	0.444444	0.571429	0.666667	D	-4	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_55.SVYTTCCNGGAARB	homer_53.NWAACCACADNN	0.182198	0.156170	0.156170	0.182198	14	12	12	14	0.857143	0.857143	1.000000	D	2	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_55.SVYTTCCNGGAARB	homer_54.ACCATCTGTT	0.317302	0.105767	0.135986	0.190381	14	10	6	18	0.333333	0.428571	0.600000	R	8	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_55.SVYTTCCNGGAARB	homer_55.SVYTTCCNGGAARB	1.000000	1.000000	1.000000	1.000000	14	14	14	14	1.000000	1.000000	1.000000	D	0	53
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_55.SVYTTCCNGGAARB	homer_56.SCCTAGCAACAG	0.502066	0.368181	0.394480	0.460227	14	12	11	15	0.733333	0.785714	0.916667	R	-1	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_55.SVYTTCCNGGAARB	homer_57.AAACCACARM	0.574106	0.151081	0.205038	0.287053	14	10	5	19	0.263158	0.357143	0.500000	R	-5	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_55.SVYTTCCNGGAARB	homer_58.RTTATGYAAB	0.329688	0.235491	0.235491	0.329688	14	10	10	14	0.714286	0.714286	1.000000	R	2	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_55.SVYTTCCNGGAARB	homer_59.NYTTCCWGGAAR	0.986547	0.845612	0.845612	0.986547	14	12	12	14	0.857143	0.857143	1.000000	R	2	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_55.SVYTTCCNGGAARB	homer_60.ASWTCCTGBT	0.693798	0.495570	0.495570	0.693798	14	10	10	14	0.714286	0.714286	1.000000	R	4	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_55.SVYTTCCNGGAARB	homer_61.DGGGYGKGGC	0.321853	0.160927	0.183916	0.257482	14	10	8	16	0.500000	0.571429	0.800000	R	-2	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_55.SVYTTCCNGGAARB	homer_62.TWGTCTGV	0.302417	0.172810	0.172810	0.302417	14	8	8	14	0.571429	0.571429	1.000000	D	2	41
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_55.SVYTTCCNGGAARB	homer_63.CTGGCAGSCTGCCA	0.638154	0.302284	0.410242	0.410242	14	14	9	19	0.473684	0.642857	0.642857	R	-5	53
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_55.SVYTTCCNGGAARB	homer_64.VGGGRATTYCCC	0.641952	0.285312	0.366830	0.427968	14	12	8	18	0.444444	0.571429	0.666667	D	-4	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_55.SVYTTCCNGGAARB	homer_65.CARRGKBCAAAGTYCA	0.103135	0.090243	0.103135	0.090243	14	16	14	16	0.875000	1.000000	0.875000	D	-2	57
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_55.SVYTTCCNGGAARB	homer_66.CCATTGTTNY	0.307489	0.219635	0.219635	0.307489	14	10	10	14	0.714286	0.714286	1.000000	D	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_55.SVYTTCCNGGAARB	homer_67.CYAAAAATAG	0.432579	0.308985	0.308985	0.432579	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_55.SVYTTCCNGGAARB	homer_68.GGGGGGGG	0.409527	0.191112	0.204763	0.358336	14	8	7	15	0.466667	0.500000	0.875000	R	-1	41
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_55.SVYTTCCNGGAARB	homer_69.TTGAMCTTTG	0.308952	0.154476	0.176544	0.247161	14	10	8	16	0.500000	0.571429	0.800000	R	-2	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_55.SVYTTCCNGGAARB	homer_70.MGGAAGTGAAAC	0.844340	0.375262	0.482480	0.562893	14	12	8	18	0.444444	0.571429	0.666667	R	-4	49
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_55.SVYTTCCNGGAARB	homer_71.HACTTCCGGY	0.773227	0.552305	0.552305	0.773227	14	10	10	14	0.714286	0.714286	1.000000	D	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_55.SVYTTCCNGGAARB	homer_72.NRYTTCCGGY	0.769309	0.549506	0.549506	0.769309	14	10	10	14	0.714286	0.714286	1.000000	D	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_55.SVYTTCCNGGAARB	homer_73.AWWNTGCTGAGTCAT	0.154823	0.144502	0.154823	0.144502	14	15	14	15	0.933333	1.000000	0.933333	D	-1	55
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_55.SVYTTCCNGGAARB	homer_74.AGGCCTAG	0.309995	0.177140	0.177140	0.309995	14	8	8	14	0.571429	0.571429	1.000000	D	2	41
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_55.SVYTTCCNGGAARB	homer_75.VTTACGTAAYNNNNN	0.309154	0.251188	0.287072	0.267934	14	15	13	16	0.812500	0.928571	0.866667	R	-2	55
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_55.SVYTTCCNGGAARB	homer_76.TGCTGACTCA	0.239442	0.171030	0.171030	0.239442	14	10	10	14	0.714286	0.714286	1.000000	D	0	45
hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_55.SVYTTCCNGGAARB	homer_77.ATTGCGCAAC	0.275781	0.196986	0.196986	0.275781	14	10	10	14	0.714286	0.714286	1.000000	R	2	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_56.SCCTAGCAACAG	homer_1.ATTTCCTGTN	0.384766	0.320638	0.320638	0.384766	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_56.SCCTAGCAACAG	homer_2.ACCGGAAGTG	0.333730	0.278108	0.278108	0.333730	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_56.SCCTAGCAACAG	homer_3.AACCGGAAGT	0.276313	0.230261	0.230261	0.276313	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_56.SCCTAGCAACAG	homer_4.ACAGGAAGTG	0.378133	0.315111	0.315111	0.378133	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_56.SCCTAGCAACAG	homer_5.RACCGGAAGT	0.307662	0.256385	0.256385	0.307662	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_56.SCCTAGCAACAG	homer_6.AGAGGAAGTG	0.401329	0.334441	0.334441	0.401329	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_56.SCCTAGCAACAG	homer_7.NNAYTTCCTGHN	0.383556	0.324548	0.351593	0.351593	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_56.SCCTAGCAACAG	homer_8.NRYTTCCGGH	0.355515	0.296263	0.296263	0.355515	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_56.SCCTAGCAACAG	homer_9.MACAGGAAGT	0.373845	0.311537	0.311537	0.373845	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_56.SCCTAGCAACAG	homer_10.ACTTCCKGKT	0.352080	0.293400	0.293400	0.352080	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_56.SCCTAGCAACAG	homer_11.ACVAGGAAGT	0.302298	0.251915	0.251915	0.302298	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_56.SCCTAGCAACAG	homer_12.YCTTATCTBN	0.332903	0.277419	0.277419	0.332903	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_56.SCCTAGCAACAG	homer_13.NBWGATAAGR	0.332204	0.276837	0.276837	0.332204	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_56.SCCTAGCAACAG	homer_14.TGGCAGTTGG	0.743244	0.346847	0.433559	0.520271	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_56.SCCTAGCAACAG	homer_15.AVCCGGAAGT	0.286718	0.238931	0.238931	0.286718	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_56.SCCTAGCAACAG	homer_16.ANCAGGAAGT	0.346793	0.288994	0.288994	0.346793	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_56.SCCTAGCAACAG	homer_17.SAGATAAGRV	0.331921	0.229792	0.248941	0.298729	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_56.SCCTAGCAACAG	homer_18.TGCTGAGTCA	0.428517	0.244867	0.285678	0.342813	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_56.SCCTAGCAACAG	homer_19.GCTATTTTTAGC	0.346478	0.293174	0.317605	0.317605	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_56.SCCTAGCAACAG	homer_20.GGCVGTTR	0.863765	0.370185	0.431883	0.647824	12	8	6	14	0.428571	0.500000	0.750000	R	6	37
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_56.SCCTAGCAACAG	homer_21.CYTGGCABNSTGCCAR	0.519373	0.336065	0.476091	0.357069	12	16	11	17	0.647059	0.916667	0.687500	D	1	53
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_56.SCCTAGCAACAG	homer_22.BBCTTATCTS	0.272148	0.226790	0.226790	0.272148	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_56.SCCTAGCAACAG	homer_23.VACAGGAAAT	0.371905	0.309921	0.309921	0.371905	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_56.SCCTAGCAACAG	homer_24.RGKGGGCGKGGC	0.312846	0.264716	0.286776	0.286776	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_56.SCCTAGCAACAG	homer_25.AGATAASR	0.325364	0.216909	0.216909	0.325364	12	8	8	12	0.666667	0.666667	1.000000	R	0	37
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_56.SCCTAGCAACAG	homer_26.YGGCCCCGCCCC	0.291784	0.175070	0.218838	0.218838	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_56.SCCTAGCAACAG	homer_27.AVCAGGAAGT	0.343533	0.286277	0.286277	0.343533	12	10	10	12	0.833333	0.833333	1.000000	D	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_56.SCCTAGCAACAG	homer_28.RGKGGGCGGAGC	0.260616	0.220522	0.238898	0.238898	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_56.SCCTAGCAACAG	homer_29.AWWWTGCTGAGTCAT	0.440165	0.352132	0.440165	0.352132	12	15	12	15	0.800000	1.000000	0.800000	R	-3	51
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_56.SCCTAGCAACAG	homer_30.CAAAGGTCAG	0.621505	0.233064	0.310752	0.372903	12	10	6	16	0.375000	0.500000	0.600000	R	-4	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_56.SCCTAGCAACAG	homer_31.VTGACTCATC	0.217080	0.180900	0.180900	0.217080	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_56.SCCTAGCAACAG	homer_32.AAAGRGGAAGTG	0.326560	0.326560	0.326560	0.326560	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_56.SCCTAGCAACAG	homer_33.GRAASTGAAAST	0.307029	0.259794	0.281444	0.281444	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_56.SCCTAGCAACAG	homer_34.CCCCTCCCCCAC	0.220325	0.220325	0.220325	0.220325	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_56.SCCTAGCAACAG	homer_35.GAAAGTGAAAGT	0.614994	0.253233	0.358746	0.358746	12	12	7	17	0.411765	0.583333	0.583333	D	5	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_56.SCCTAGCAACAG	homer_36.DATGASTCATHN	0.171443	0.171443	0.171443	0.171443	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_56.SCCTAGCAACAG	homer_37.NDATGASTCAYN	0.253888	0.214828	0.232731	0.232731	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_56.SCCTAGCAACAG	homer_38.RATGASTCAT	0.202206	0.168505	0.168505	0.202206	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_56.SCCTAGCAACAG	homer_39.DATGASTCAT	0.190230	0.158525	0.158525	0.190230	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_56.SCCTAGCAACAG	homer_40.AGTTTCAKTTTC	0.380665	0.322101	0.348943	0.348943	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_56.SCCTAGCAACAG	homer_41.NNATGASTCATH	0.213624	0.213624	0.213624	0.213624	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_56.SCCTAGCAACAG	homer_42.SAAACCACAG	0.451592	0.376327	0.376327	0.451592	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_56.SCCTAGCAACAG	homer_43.GAAASYGAAASY	0.639459	0.263306	0.373018	0.373018	12	12	7	17	0.411765	0.583333	0.583333	D	5	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_56.SCCTAGCAACAG	homer_44.AVCAGCTG	0.472947	0.315298	0.315298	0.472947	12	8	8	12	0.666667	0.666667	1.000000	D	4	37
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_56.SCCTAGCAACAG	homer_45.SGTCACGTGR	0.373255	0.213289	0.248837	0.298604	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_56.SCCTAGCAACAG	homer_46.NATGASTCABNN	0.200707	0.200707	0.200707	0.200707	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_56.SCCTAGCAACAG	homer_47.GATGASTCATCN	0.151840	0.151840	0.151840	0.151840	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_56.SCCTAGCAACAG	homer_48.AGTTTCASTTTC	0.357690	0.302661	0.327883	0.327883	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_56.SCCTAGCAACAG	homer_49.RCAGGATGTGGT	0.289599	0.206857	0.241333	0.241333	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_56.SCCTAGCAACAG	homer_50.GGGGGAATCCCC	0.200190	0.142993	0.166825	0.166825	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_56.SCCTAGCAACAG	homer_51.GCTGTGGTTW	0.462993	0.320534	0.347245	0.416694	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_56.SCCTAGCAACAG	homer_52.GGATGACTCATC	0.171116	0.171116	0.171116	0.171116	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_56.SCCTAGCAACAG	homer_53.NWAACCACADNN	0.464793	0.331995	0.387327	0.387327	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_56.SCCTAGCAACAG	homer_54.ACCATCTGTT	0.429903	0.245659	0.286602	0.343923	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_56.SCCTAGCAACAG	homer_55.SVYTTCCNGGAARB	0.502066	0.368181	0.460227	0.394480	12	14	11	15	0.733333	0.916667	0.785714	R	-3	49
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_56.SCCTAGCAACAG	homer_56.SCCTAGCAACAG	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_56.SCCTAGCAACAG	homer_57.AAACCACARM	0.454344	0.314546	0.340758	0.408909	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_56.SCCTAGCAACAG	homer_58.RTTATGYAAB	0.330713	0.275594	0.275594	0.330713	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_56.SCCTAGCAACAG	homer_59.NYTTCCWGGAAR	0.542928	0.387805	0.452440	0.452440	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_56.SCCTAGCAACAG	homer_60.ASWTCCTGBT	0.301072	0.250893	0.250893	0.301072	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_56.SCCTAGCAACAG	homer_61.DGGGYGKGGC	0.476258	0.222254	0.277817	0.333381	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_56.SCCTAGCAACAG	homer_62.TWGTCTGV	0.352925	0.235283	0.235283	0.352925	12	8	8	12	0.666667	0.666667	1.000000	R	2	37
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_56.SCCTAGCAACAG	homer_63.CTGGCAGSCTGCCA	0.486690	0.304181	0.405575	0.347636	12	14	10	16	0.625000	0.833333	0.714286	D	2	49
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_56.SCCTAGCAACAG	homer_64.VGGGRATTYCCC	0.278014	0.166808	0.208510	0.208510	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_56.SCCTAGCAACAG	homer_65.CARRGKBCAAAGTYCA	0.305359	0.229019	0.305359	0.229019	12	16	12	16	0.750000	1.000000	0.750000	R	-3	53
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_56.SCCTAGCAACAG	homer_66.CCATTGTTNY	0.419947	0.349956	0.349956	0.419947	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_56.SCCTAGCAACAG	homer_67.CYAAAAATAG	0.386776	0.322313	0.322313	0.386776	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_56.SCCTAGCAACAG	homer_68.GGGGGGGG	0.296664	0.159742	0.173054	0.259581	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_56.SCCTAGCAACAG	homer_69.TTGAMCTTTG	0.533574	0.200090	0.266787	0.320144	12	10	6	16	0.375000	0.500000	0.600000	D	-4	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_56.SCCTAGCAACAG	homer_70.MGGAAGTGAAAC	0.465419	0.232709	0.310279	0.310279	12	12	8	16	0.500000	0.666667	0.666667	D	4	45
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_56.SCCTAGCAACAG	homer_71.HACTTCCGGY	0.369541	0.307951	0.307951	0.369541	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_56.SCCTAGCAACAG	homer_72.NRYTTCCGGY	0.358532	0.298776	0.298776	0.358532	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_56.SCCTAGCAACAG	homer_73.AWWNTGCTGAGTCAT	0.421103	0.336882	0.421103	0.336882	12	15	12	15	0.800000	1.000000	0.800000	R	-3	51
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_56.SCCTAGCAACAG	homer_74.AGGCCTAG	0.744430	0.319041	0.372215	0.558322	12	8	6	14	0.428571	0.500000	0.750000	D	-2	37
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_56.SCCTAGCAACAG	homer_75.VTTACGTAAYNNNNN	0.280369	0.224295	0.280369	0.224295	12	15	12	15	0.800000	1.000000	0.800000	D	0	51
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_56.SCCTAGCAACAG	homer_76.TGCTGACTCA	0.483839	0.276479	0.322559	0.387071	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_56.SCCTAGCAACAG	homer_77.ATTGCGCAAC	0.400285	0.333571	0.333571	0.400285	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_57.AAACCACARM	homer_1.ATTTCCTGTN	0.519900	0.222814	0.311940	0.311940	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_57.AAACCACARM	homer_2.ACCGGAAGTG	0.384833	0.256555	0.307866	0.307866	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_57.AAACCACARM	homer_3.AACCGGAAGT	0.415184	0.339696	0.373665	0.373665	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_57.AAACCACARM	homer_4.ACAGGAAGTG	0.497742	0.213318	0.298645	0.298645	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_57.AAACCACARM	homer_5.RACCGGAAGT	0.373104	0.305267	0.335794	0.335794	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_57.AAACCACARM	homer_6.AGAGGAAGTG	0.506146	0.216920	0.303687	0.303687	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_57.AAACCACARM	homer_7.NNAYTTCCTGHN	0.249672	0.172850	0.224705	0.187254	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_57.AAACCACARM	homer_8.NRYTTCCGGH	0.288038	0.192026	0.230431	0.230431	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_57.AAACCACARM	homer_9.MACAGGAAGT	0.612831	0.262642	0.367698	0.367698	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_57.AAACCACARM	homer_10.ACTTCCKGKT	0.269753	0.220707	0.242777	0.242777	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_57.AAACCACARM	homer_11.ACVAGGAAGT	0.302456	0.201637	0.241965	0.241965	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_57.AAACCACARM	homer_12.YCTTATCTBN	0.232104	0.154736	0.185683	0.185683	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_57.AAACCACARM	homer_13.NBWGATAAGR	0.259582	0.173055	0.207666	0.207666	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_57.AAACCACARM	homer_14.TGGCAGTTGG	0.442245	0.361837	0.398020	0.398020	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_57.AAACCACARM	homer_15.AVCCGGAAGT	0.388809	0.318116	0.349928	0.349928	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_57.AAACCACARM	homer_16.ANCAGGAAGT	0.248623	0.165749	0.198899	0.198899	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_57.AAACCACARM	homer_17.SAGATAAGRV	0.390473	0.167346	0.234284	0.234284	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_57.AAACCACARM	homer_18.TGCTGAGTCA	0.214002	0.175092	0.192602	0.192602	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_57.AAACCACARM	homer_19.GCTATTTTTAGC	0.298658	0.248881	0.298658	0.248881	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_57.AAACCACARM	homer_20.GGCVGTTR	0.499602	0.399681	0.399681	0.499602	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_57.AAACCACARM	homer_21.CYTGGCABNSTGCCAR	0.427427	0.189968	0.341942	0.213713	10	16	8	18	0.444444	0.800000	0.500000	R	-8	49
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_57.AAACCACARM	homer_22.BBCTTATCTS	0.414814	0.177777	0.248888	0.248888	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_57.AAACCACARM	homer_23.VACAGGAAAT	0.331017	0.270832	0.297916	0.297916	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_57.AAACCACARM	homer_24.RGKGGGCGKGGC	0.440524	0.251728	0.352420	0.293683	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_57.AAACCACARM	homer_25.AGATAASR	0.249184	0.199347	0.199347	0.249184	10	8	8	10	0.800000	0.800000	1.000000	D	0	33
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_57.AAACCACARM	homer_26.YGGCCCCGCCCC	0.280981	0.234151	0.280981	0.234151	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_57.AAACCACARM	homer_27.AVCAGGAAGT	0.236261	0.193304	0.212634	0.212634	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_57.AAACCACARM	homer_28.RGKGGGCGGAGC	0.411206	0.234975	0.328965	0.274137	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_57.AAACCACARM	homer_29.AWWWTGCTGAGTCAT	0.328187	0.218791	0.328187	0.218791	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_57.AAACCACARM	homer_30.CAAAGGTCAG	0.410657	0.335992	0.369592	0.369592	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_57.AAACCACARM	homer_31.VTGACTCATC	0.194502	0.194502	0.194502	0.194502	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_57.AAACCACARM	homer_32.AAAGRGGAAGTG	0.289427	0.241189	0.289427	0.241189	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_57.AAACCACARM	homer_33.GRAASTGAAAST	0.368092	0.306743	0.368092	0.306743	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_57.AAACCACARM	homer_34.CCCCTCCCCCAC	0.387274	0.268113	0.348547	0.290456	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_57.AAACCACARM	homer_35.GAAAGTGAAAGT	0.373240	0.311033	0.373240	0.311033	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_57.AAACCACARM	homer_36.DATGASTCATHN	0.329468	0.228093	0.296521	0.247101	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_57.AAACCACARM	homer_37.NDATGASTCAYN	0.338153	0.234106	0.304337	0.253614	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_57.AAACCACARM	homer_38.RATGASTCAT	0.315325	0.210216	0.252260	0.252260	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_57.AAACCACARM	homer_39.DATGASTCAT	0.320124	0.213416	0.256099	0.256099	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_57.AAACCACARM	homer_40.AGTTTCAKTTTC	0.452795	0.377329	0.452795	0.377329	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_57.AAACCACARM	homer_41.NNATGASTCATH	0.315235	0.218239	0.283711	0.236426	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_57.AAACCACARM	homer_42.SAAACCACAG	0.986083	0.806795	0.887475	0.887475	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_57.AAACCACARM	homer_43.GAAASYGAAASY	0.517464	0.431220	0.517464	0.431220	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_57.AAACCACARM	homer_44.AVCAGCTG	0.561337	0.280668	0.336802	0.421003	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_57.AAACCACARM	homer_45.SGTCACGTGR	0.382831	0.313225	0.344548	0.344548	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_57.AAACCACARM	homer_46.NATGASTCABNN	0.319075	0.220898	0.287168	0.239307	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_57.AAACCACARM	homer_47.GATGASTCATCN	0.317208	0.219605	0.285487	0.237906	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_57.AAACCACARM	homer_48.AGTTTCASTTTC	0.424029	0.353357	0.424029	0.353357	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_57.AAACCACARM	homer_49.RCAGGATGTGGT	0.787963	0.450264	0.630370	0.525308	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_57.AAACCACARM	homer_50.GGGGGAATCCCC	0.594446	0.277408	0.416112	0.346760	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_57.AAACCACARM	homer_51.GCTGTGGTTW	0.968864	0.968864	0.968864	0.968864	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_57.AAACCACARM	homer_52.GGATGACTCATC	0.296361	0.205173	0.266725	0.222271	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_57.AAACCACARM	homer_53.NWAACCACADNN	0.958817	0.799014	0.958817	0.799014	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_57.AAACCACARM	homer_54.ACCATCTGTT	0.402714	0.268476	0.322171	0.322171	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_57.AAACCACARM	homer_55.SVYTTCCNGGAARB	0.574106	0.151081	0.287053	0.205038	10	14	5	19	0.263158	0.500000	0.357143	R	-9	45
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_57.AAACCACARM	homer_56.SCCTAGCAACAG	0.454344	0.314546	0.408909	0.340758	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_57.AAACCACARM	homer_57.AAACCACARM	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_57.AAACCACARM	homer_58.RTTATGYAAB	0.192822	0.192822	0.192822	0.192822	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_57.AAACCACARM	homer_59.NYTTCCWGGAAR	0.698520	0.155227	0.279408	0.232840	10	12	4	18	0.222222	0.400000	0.333333	R	-8	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_57.AAACCACARM	homer_60.ASWTCCTGBT	0.335595	0.274578	0.302035	0.302035	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_57.AAACCACARM	homer_61.DGGGYGKGGC	0.550044	0.366696	0.440035	0.440035	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_57.AAACCACARM	homer_62.TWGTCTGV	0.453256	0.288436	0.317279	0.396599	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_57.AAACCACARM	homer_63.CTGGCAGSCTGCCA	0.499806	0.205803	0.349865	0.249903	10	14	7	17	0.411765	0.700000	0.500000	R	-7	45
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_57.AAACCACARM	homer_64.VGGGRATTYCCC	0.375330	0.259844	0.337797	0.281498	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_57.AAACCACARM	homer_65.CARRGKBCAAAGTYCA	0.393898	0.246187	0.393898	0.246187	10	16	10	16	0.625000	1.000000	0.625000	D	-1	49
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_57.AAACCACARM	homer_66.CCATTGTTNY	0.593852	0.395901	0.475081	0.475081	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_57.AAACCACARM	homer_67.CYAAAAATAG	0.494822	0.266443	0.346375	0.346375	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_57.AAACCACARM	homer_68.GGGGGGGG	0.461548	0.293712	0.323084	0.403855	10	8	7	11	0.636364	0.700000	0.875000	R	3	33
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_57.AAACCACARM	homer_69.TTGAMCTTTG	0.368807	0.301751	0.331926	0.331926	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_57.AAACCACARM	homer_70.MGGAAGTGAAAC	0.289622	0.200508	0.260660	0.217217	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_57.AAACCACARM	homer_71.HACTTCCGGY	0.371431	0.247621	0.297145	0.297145	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_57.AAACCACARM	homer_72.NRYTTCCGGY	0.396964	0.264642	0.317571	0.317571	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_57.AAACCACARM	homer_73.AWWNTGCTGAGTCAT	0.334861	0.223240	0.334861	0.223240	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_57.AAACCACARM	homer_74.AGGCCTAG	0.227993	0.182394	0.182394	0.227993	10	8	8	10	0.800000	0.800000	1.000000	D	0	33
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_57.AAACCACARM	homer_75.VTTACGTAAYNNNNN	0.449663	0.252935	0.404697	0.269798	10	15	9	16	0.562500	0.900000	0.600000	D	-6	47
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_57.AAACCACARM	homer_76.TGCTGACTCA	0.293992	0.195994	0.235193	0.235193	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_57.AAACCACARM	homer_77.ATTGCGCAAC	0.246170	0.246170	0.246170	0.246170	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_58.RTTATGYAAB	homer_1.ATTTCCTGTN	0.333606	0.333606	0.333606	0.333606	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_58.RTTATGYAAB	homer_2.ACCGGAAGTG	0.302273	0.201515	0.241818	0.241818	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_58.RTTATGYAAB	homer_3.AACCGGAAGT	0.236280	0.193320	0.212652	0.212652	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_58.RTTATGYAAB	homer_4.ACAGGAAGTG	0.271954	0.181303	0.217563	0.217563	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_58.RTTATGYAAB	homer_5.RACCGGAAGT	0.250359	0.204839	0.225323	0.225323	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_58.RTTATGYAAB	homer_6.AGAGGAAGTG	0.358761	0.239174	0.287009	0.287009	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_58.RTTATGYAAB	homer_7.NNAYTTCCTGHN	0.272275	0.188498	0.245048	0.204206	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_58.RTTATGYAAB	homer_8.NRYTTCCGGH	0.325373	0.216915	0.260298	0.260298	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_58.RTTATGYAAB	homer_9.MACAGGAAGT	0.175670	0.175670	0.175670	0.175670	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_58.RTTATGYAAB	homer_10.ACTTCCKGKT	0.331680	0.271375	0.298512	0.298512	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_58.RTTATGYAAB	homer_11.ACVAGGAAGT	0.311247	0.254656	0.280122	0.280122	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_58.RTTATGYAAB	homer_12.YCTTATCTBN	0.487956	0.399237	0.439161	0.439161	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_58.RTTATGYAAB	homer_13.NBWGATAAGR	0.477058	0.390321	0.429353	0.429353	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_58.RTTATGYAAB	homer_14.TGGCAGTTGG	0.740928	0.246976	0.370464	0.370464	10	10	5	15	0.333333	0.500000	0.500000	R	5	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_58.RTTATGYAAB	homer_15.AVCCGGAAGT	0.263522	0.215609	0.237170	0.237170	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_58.RTTATGYAAB	homer_16.ANCAGGAAGT	0.300278	0.245682	0.270250	0.270250	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_58.RTTATGYAAB	homer_17.SAGATAAGRV	0.525939	0.350626	0.420751	0.420751	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_58.RTTATGYAAB	homer_18.TGCTGAGTCA	0.336153	0.275034	0.302537	0.302537	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_58.RTTATGYAAB	homer_19.GCTATTTTTAGC	0.301807	0.251506	0.301807	0.251506	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_58.RTTATGYAAB	homer_20.GGCVGTTR	0.894876	0.255679	0.357950	0.447438	10	8	4	14	0.285714	0.400000	0.500000	R	6	33
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_58.RTTATGYAAB	homer_21.CYTGGCABNSTGCCAR	0.265540	0.165963	0.265540	0.165963	10	16	10	16	0.625000	1.000000	0.625000	D	-6	49
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_58.RTTATGYAAB	homer_22.BBCTTATCTS	0.537701	0.358467	0.430161	0.430161	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_58.RTTATGYAAB	homer_23.VACAGGAAAT	0.269975	0.269975	0.269975	0.269975	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_58.RTTATGYAAB	homer_24.RGKGGGCGKGGC	0.315338	0.092746	0.157669	0.131391	10	12	5	17	0.294118	0.500000	0.416667	R	5	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_58.RTTATGYAAB	homer_25.AGATAASR	0.648813	0.412881	0.454169	0.567712	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_58.RTTATGYAAB	homer_26.YGGCCCCGCCCC	0.943849	0.044945	0.094385	0.078654	10	12	1	21	0.047619	0.100000	0.083333	R	-11	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_58.RTTATGYAAB	homer_27.AVCAGGAAGT	0.334138	0.273386	0.300724	0.300724	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_58.RTTATGYAAB	homer_28.RGKGGGCGGAGC	0.091116	0.042521	0.063781	0.053151	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_58.RTTATGYAAB	homer_29.AWWWTGCTGAGTCAT	0.328321	0.218881	0.328321	0.218881	10	15	10	15	0.666667	1.000000	0.666667	R	0	47
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_58.RTTATGYAAB	homer_30.CAAAGGTCAG	0.170475	0.170475	0.170475	0.170475	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_58.RTTATGYAAB	homer_31.VTGACTCATC	0.360077	0.360077	0.360077	0.360077	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_58.RTTATGYAAB	homer_32.AAAGRGGAAGTG	0.328710	0.273925	0.328710	0.273925	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_58.RTTATGYAAB	homer_33.GRAASTGAAAST	0.341527	0.284605	0.341527	0.284605	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_58.RTTATGYAAB	homer_34.CCCCTCCCCCAC	0.200104	0.166754	0.200104	0.166754	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_58.RTTATGYAAB	homer_35.GAAAGTGAAAGT	0.341084	0.284237	0.341084	0.284237	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_58.RTTATGYAAB	homer_36.DATGASTCATHN	0.350411	0.292009	0.350411	0.292009	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_58.RTTATGYAAB	homer_37.NDATGASTCAYN	0.423582	0.352985	0.423582	0.352985	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_58.RTTATGYAAB	homer_38.RATGASTCAT	0.374730	0.374730	0.374730	0.374730	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_58.RTTATGYAAB	homer_39.DATGASTCAT	0.361850	0.361850	0.361850	0.361850	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_58.RTTATGYAAB	homer_40.AGTTTCAKTTTC	0.349097	0.290914	0.349097	0.290914	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_58.RTTATGYAAB	homer_41.NNATGASTCATH	0.416291	0.346909	0.416291	0.346909	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_58.RTTATGYAAB	homer_42.SAAACCACAG	0.674928	0.224976	0.337464	0.337464	10	10	5	15	0.333333	0.500000	0.500000	D	5	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_58.RTTATGYAAB	homer_43.GAAASYGAAASY	0.324004	0.270004	0.324004	0.270004	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_58.RTTATGYAAB	homer_44.AVCAGCTG	0.245683	0.196546	0.196546	0.245683	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_58.RTTATGYAAB	homer_45.SGTCACGTGR	0.279308	0.228524	0.251377	0.251377	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_58.RTTATGYAAB	homer_46.NATGASTCABNN	0.387502	0.322918	0.387502	0.322918	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_58.RTTATGYAAB	homer_47.GATGASTCATCN	0.353726	0.294771	0.353726	0.294771	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_58.RTTATGYAAB	homer_48.AGTTTCASTTTC	0.320276	0.266897	0.320276	0.266897	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_58.RTTATGYAAB	homer_49.RCAGGATGTGGT	0.332421	0.155130	0.232694	0.193912	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_58.RTTATGYAAB	homer_50.GGGGGAATCCCC	0.263526	0.150587	0.210821	0.175684	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_58.RTTATGYAAB	homer_51.GCTGTGGTTW	0.378471	0.203792	0.264930	0.264930	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_58.RTTATGYAAB	homer_52.GGATGACTCATC	0.350275	0.291896	0.350275	0.291896	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_58.RTTATGYAAB	homer_53.NWAACCACADNN	0.242205	0.201838	0.242205	0.201838	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_58.RTTATGYAAB	homer_54.ACCATCTGTT	0.254693	0.169795	0.203754	0.203754	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_58.RTTATGYAAB	homer_55.SVYTTCCNGGAARB	0.329688	0.235491	0.329688	0.235491	10	14	10	14	0.714286	1.000000	0.714286	R	-2	45
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_58.RTTATGYAAB	homer_56.SCCTAGCAACAG	0.330713	0.275594	0.330713	0.275594	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_58.RTTATGYAAB	homer_57.AAACCACARM	0.192822	0.192822	0.192822	0.192822	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_58.RTTATGYAAB	homer_58.RTTATGYAAB	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_58.RTTATGYAAB	homer_59.NYTTCCWGGAAR	0.336574	0.280478	0.336574	0.280478	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_58.RTTATGYAAB	homer_60.ASWTCCTGBT	0.280002	0.186668	0.224002	0.224002	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_58.RTTATGYAAB	homer_61.DGGGYGKGGC	0.326769	0.108923	0.163385	0.163385	10	10	5	15	0.333333	0.500000	0.500000	R	5	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_58.RTTATGYAAB	homer_62.TWGTCTGV	0.251983	0.201587	0.201587	0.251983	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_58.RTTATGYAAB	homer_63.CTGGCAGSCTGCCA	0.216471	0.154622	0.216471	0.154622	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_58.RTTATGYAAB	homer_64.VGGGRATTYCCC	0.260997	0.121798	0.182698	0.152248	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_58.RTTATGYAAB	homer_65.CARRGKBCAAAGTYCA	0.275544	0.172215	0.275544	0.172215	10	16	10	16	0.625000	1.000000	0.625000	D	-1	49
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_58.RTTATGYAAB	homer_66.CCATTGTTNY	0.537060	0.358040	0.429648	0.429648	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_58.RTTATGYAAB	homer_67.CYAAAAATAG	0.303031	0.247935	0.272728	0.272728	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_58.RTTATGYAAB	homer_68.GGGGGGGG	0.730297	0.042959	0.073030	0.091287	10	8	1	17	0.058824	0.100000	0.125000	D	-7	33
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_58.RTTATGYAAB	homer_69.TTGAMCTTTG	0.201263	0.201263	0.201263	0.201263	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_58.RTTATGYAAB	homer_70.MGGAAGTGAAAC	0.336933	0.280778	0.336933	0.280778	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_58.RTTATGYAAB	homer_71.HACTTCCGGY	0.345709	0.230472	0.276567	0.276567	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_58.RTTATGYAAB	homer_72.NRYTTCCGGY	0.315051	0.210034	0.252041	0.252041	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_58.RTTATGYAAB	homer_73.AWWNTGCTGAGTCAT	0.333716	0.222478	0.333716	0.222478	10	15	10	15	0.666667	1.000000	0.666667	R	0	47
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_58.RTTATGYAAB	homer_74.AGGCCTAG	0.112022	0.089618	0.089618	0.112022	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_58.RTTATGYAAB	homer_75.VTTACGTAAYNNNNN	0.919987	0.613325	0.919987	0.613325	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_58.RTTATGYAAB	homer_76.TGCTGACTCA	0.370809	0.247206	0.296647	0.296647	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_58.RTTATGYAAB	homer_77.ATTGCGCAAC	0.761457	0.761457	0.761457	0.761457	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_59.NYTTCCWGGAAR	homer_1.ATTTCCTGTN	0.678509	0.565424	0.565424	0.678509	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_59.NYTTCCWGGAAR	homer_2.ACCGGAAGTG	0.753940	0.521958	0.565455	0.678546	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_59.NYTTCCWGGAAR	homer_3.AACCGGAAGT	0.628731	0.523942	0.523942	0.628731	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_59.NYTTCCWGGAAR	homer_4.ACAGGAAGTG	0.722545	0.500223	0.541908	0.650290	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_59.NYTTCCWGGAAR	homer_5.RACCGGAAGT	0.657258	0.547715	0.547715	0.657258	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_59.NYTTCCWGGAAR	homer_6.AGAGGAAGTG	0.581598	0.402645	0.436198	0.523438	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_59.NYTTCCWGGAAR	homer_7.NNAYTTCCTGHN	0.694462	0.496044	0.578719	0.578719	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_59.NYTTCCWGGAAR	homer_8.NRYTTCCGGH	0.741321	0.513222	0.555991	0.667189	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_59.NYTTCCWGGAAR	homer_9.MACAGGAAGT	0.588692	0.490576	0.490576	0.588692	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_59.NYTTCCWGGAAR	homer_10.ACTTCCKGKT	0.693030	0.577525	0.577525	0.693030	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_59.NYTTCCWGGAAR	homer_11.ACVAGGAAGT	0.619760	0.516466	0.516466	0.619760	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_59.NYTTCCWGGAAR	homer_12.YCTTATCTBN	0.290662	0.201227	0.217996	0.261595	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_59.NYTTCCWGGAAR	homer_13.NBWGATAAGR	0.281809	0.195099	0.211357	0.253628	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_59.NYTTCCWGGAAR	homer_14.TGGCAGTTGG	0.357476	0.166822	0.208528	0.250233	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_59.NYTTCCWGGAAR	homer_15.AVCCGGAAGT	0.663341	0.552784	0.552784	0.663341	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_59.NYTTCCWGGAAR	homer_16.ANCAGGAAGT	0.657659	0.548049	0.548049	0.657659	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_59.NYTTCCWGGAAR	homer_17.SAGATAAGRV	0.288472	0.199712	0.216354	0.259625	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_59.NYTTCCWGGAAR	homer_18.TGCTGAGTCA	0.243170	0.091189	0.121585	0.145902	12	10	6	16	0.375000	0.500000	0.600000	D	-4	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_59.NYTTCCWGGAAR	homer_19.GCTATTTTTAGC	0.389547	0.233728	0.292160	0.292160	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_59.NYTTCCWGGAAR	homer_20.GGCVGTTR	0.465936	0.155312	0.194140	0.291210	12	8	5	15	0.333333	0.416667	0.625000	D	-3	37
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_59.NYTTCCWGGAAR	homer_21.CYTGGCABNSTGCCAR	0.587277	0.278184	0.440457	0.330343	12	16	9	19	0.473684	0.750000	0.562500	R	-7	53
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_59.NYTTCCWGGAAR	homer_22.BBCTTATCTS	0.272723	0.188808	0.204542	0.245450	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_59.NYTTCCWGGAAR	homer_23.VACAGGAAAT	0.697775	0.581479	0.581479	0.697775	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_59.NYTTCCWGGAAR	homer_24.RGKGGGCGKGGC	0.168931	0.101359	0.126698	0.126698	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_59.NYTTCCWGGAAR	homer_25.AGATAASR	0.303839	0.163606	0.177240	0.265859	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_59.NYTTCCWGGAAR	homer_26.YGGCCCCGCCCC	0.236590	0.097420	0.138011	0.138011	12	12	7	17	0.411765	0.583333	0.583333	D	-5	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_59.NYTTCCWGGAAR	homer_27.AVCAGGAAGT	0.732840	0.610700	0.610700	0.732840	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_59.NYTTCCWGGAAR	homer_28.RGKGGGCGGAGC	0.107401	0.107401	0.107401	0.107401	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_59.NYTTCCWGGAAR	homer_29.AWWWTGCTGAGTCAT	0.200330	0.160264	0.200330	0.160264	12	15	12	15	0.800000	1.000000	0.800000	R	0	51
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_59.NYTTCCWGGAAR	homer_30.CAAAGGTCAG	0.158363	0.131969	0.131969	0.158363	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_59.NYTTCCWGGAAR	homer_31.VTGACTCATC	0.201928	0.115388	0.134619	0.161543	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_59.NYTTCCWGGAAR	homer_32.AAAGRGGAAGTG	0.436022	0.368942	0.399687	0.399687	12	12	11	13	0.846154	0.916667	0.916667	R	-1	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_59.NYTTCCWGGAAR	homer_33.GRAASTGAAAST	0.861569	0.287190	0.430785	0.430785	12	12	6	18	0.333333	0.500000	0.500000	R	-6	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_59.NYTTCCWGGAAR	homer_34.CCCCTCCCCCAC	0.246138	0.208271	0.225627	0.225627	12	12	11	13	0.846154	0.916667	0.916667	D	-1	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_59.NYTTCCWGGAAR	homer_35.GAAAGTGAAAGT	0.879198	0.231368	0.366333	0.366333	12	12	5	19	0.263158	0.416667	0.416667	R	-7	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_59.NYTTCCWGGAAR	homer_36.DATGASTCATHN	0.170669	0.102401	0.128002	0.128002	12	12	9	15	0.600000	0.750000	0.750000	D	-3	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_59.NYTTCCWGGAAR	homer_37.NDATGASTCAYN	0.234639	0.117320	0.156426	0.156426	12	12	8	16	0.500000	0.666667	0.666667	D	-4	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_59.NYTTCCWGGAAR	homer_38.RATGASTCAT	0.216192	0.100889	0.126112	0.151334	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_59.NYTTCCWGGAAR	homer_39.DATGASTCAT	0.224953	0.104978	0.131223	0.157467	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_59.NYTTCCWGGAAR	homer_40.AGTTTCAKTTTC	0.795506	0.265169	0.397753	0.397753	12	12	6	18	0.333333	0.500000	0.500000	D	-6	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_59.NYTTCCWGGAAR	homer_41.NNATGASTCATH	0.166550	0.099930	0.124912	0.124912	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_59.NYTTCCWGGAAR	homer_42.SAAACCACAG	0.517490	0.152203	0.215621	0.258745	12	10	5	17	0.294118	0.416667	0.500000	R	-5	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_59.NYTTCCWGGAAR	homer_43.GAAASYGAAASY	0.684704	0.228235	0.342352	0.342352	12	12	6	18	0.333333	0.500000	0.500000	R	-6	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_59.NYTTCCWGGAAR	homer_44.AVCAGCTG	0.888903	0.098767	0.148151	0.222226	12	8	2	18	0.111111	0.166667	0.250000	D	10	37
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_59.NYTTCCWGGAAR	homer_45.SGTCACGTGR	0.173540	0.144616	0.144616	0.173540	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_59.NYTTCCWGGAAR	homer_46.NATGASTCABNN	0.179234	0.089617	0.119489	0.119489	12	12	8	16	0.500000	0.666667	0.666667	R	-4	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_59.NYTTCCWGGAAR	homer_47.GATGASTCATCN	0.207434	0.103717	0.138289	0.138289	12	12	8	16	0.500000	0.666667	0.666667	R	-4	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_59.NYTTCCWGGAAR	homer_48.AGTTTCASTTTC	0.903117	0.237662	0.376299	0.376299	12	12	5	19	0.263158	0.416667	0.416667	D	-7	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_59.NYTTCCWGGAAR	homer_49.RCAGGATGTGGT	0.563473	0.338084	0.422605	0.422605	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_59.NYTTCCWGGAAR	homer_50.GGGGGAATCCCC	0.401888	0.241133	0.301416	0.301416	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_59.NYTTCCWGGAAR	homer_51.GCTGTGGTTW	0.535625	0.119028	0.178542	0.214250	12	10	4	18	0.222222	0.333333	0.400000	D	-6	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_59.NYTTCCWGGAAR	homer_52.GGATGACTCATC	0.197869	0.098934	0.131912	0.131912	12	12	8	16	0.500000	0.666667	0.666667	D	-4	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_59.NYTTCCWGGAAR	homer_53.NWAACCACADNN	0.155787	0.155787	0.155787	0.155787	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_59.NYTTCCWGGAAR	homer_54.ACCATCTGTT	0.148188	0.102592	0.111141	0.133369	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_59.NYTTCCWGGAAR	homer_55.SVYTTCCNGGAARB	0.986547	0.845612	0.986547	0.845612	12	14	12	14	0.857143	1.000000	0.857143	R	0	49
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_59.NYTTCCWGGAAR	homer_56.SCCTAGCAACAG	0.542928	0.387805	0.452440	0.452440	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_59.NYTTCCWGGAAR	homer_57.AAACCACARM	0.698520	0.155227	0.232840	0.279408	12	10	4	18	0.222222	0.333333	0.400000	R	-6	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_59.NYTTCCWGGAAR	homer_58.RTTATGYAAB	0.336574	0.280478	0.280478	0.336574	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_59.NYTTCCWGGAAR	homer_59.NYTTCCWGGAAR	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_59.NYTTCCWGGAAR	homer_60.ASWTCCTGBT	0.679645	0.566371	0.566371	0.679645	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_59.NYTTCCWGGAAR	homer_61.DGGGYGKGGC	0.314592	0.146810	0.183512	0.220215	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_59.NYTTCCWGGAAR	homer_62.TWGTCTGV	0.269919	0.179946	0.179946	0.269919	12	8	8	12	0.666667	0.666667	1.000000	D	1	37
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_59.NYTTCCWGGAAR	homer_63.CTGGCAGSCTGCCA	0.619766	0.275452	0.413178	0.354152	12	14	8	18	0.444444	0.666667	0.571429	R	-6	49
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_59.NYTTCCWGGAAR	homer_64.VGGGRATTYCCC	0.666729	0.274536	0.388925	0.388925	12	12	7	17	0.411765	0.583333	0.583333	D	-5	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_59.NYTTCCWGGAAR	homer_65.CARRGKBCAAAGTYCA	0.136936	0.102702	0.136936	0.102702	12	16	12	16	0.750000	1.000000	0.750000	D	-3	53
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_59.NYTTCCWGGAAR	homer_66.CCATTGTTNY	0.314365	0.217638	0.235774	0.282929	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_59.NYTTCCWGGAAR	homer_67.CYAAAAATAG	0.448354	0.310399	0.336266	0.403519	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_59.NYTTCCWGGAAR	homer_68.GGGGGGGG	0.411839	0.176503	0.205920	0.308880	12	8	6	14	0.428571	0.500000	0.750000	R	-2	37
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_59.NYTTCCWGGAAR	homer_69.TTGAMCTTTG	0.337901	0.157687	0.197109	0.236530	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_59.NYTTCCWGGAAR	homer_70.MGGAAGTGAAAC	0.881245	0.362866	0.514060	0.514060	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_59.NYTTCCWGGAAR	homer_71.HACTTCCGGY	0.750717	0.519727	0.563038	0.675645	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_59.NYTTCCWGGAAR	homer_72.NRYTTCCGGY	0.756170	0.523503	0.567128	0.680553	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_59.NYTTCCWGGAAR	homer_73.AWWNTGCTGAGTCAT	0.181307	0.145046	0.181307	0.145046	12	15	12	15	0.800000	1.000000	0.800000	R	0	51
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_59.NYTTCCWGGAAR	homer_74.AGGCCTAG	0.298454	0.198969	0.198969	0.298454	12	8	8	12	0.666667	0.666667	1.000000	D	1	37
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_59.NYTTCCWGGAAR	homer_75.VTTACGTAAYNNNNN	0.302248	0.241799	0.302248	0.241799	12	15	12	15	0.800000	1.000000	0.800000	R	-3	51
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_59.NYTTCCWGGAAR	homer_76.TGCTGACTCA	0.176694	0.147245	0.147245	0.176694	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_59.NYTTCCWGGAAR	homer_77.ATTGCGCAAC	0.275330	0.229441	0.229441	0.275330	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_60.ASWTCCTGBT	homer_1.ATTTCCTGTN	0.776795	0.776795	0.776795	0.776795	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_60.ASWTCCTGBT	homer_2.ACCGGAAGTG	0.861495	0.704859	0.775345	0.775345	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_60.ASWTCCTGBT	homer_3.AACCGGAAGT	0.804307	0.804307	0.804307	0.804307	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_60.ASWTCCTGBT	homer_4.ACAGGAAGTG	0.883411	0.722791	0.795070	0.795070	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_60.ASWTCCTGBT	homer_5.RACCGGAAGT	0.842204	0.842204	0.842204	0.842204	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_60.ASWTCCTGBT	homer_6.AGAGGAAGTG	0.706548	0.578085	0.635893	0.635893	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_60.ASWTCCTGBT	homer_7.NNAYTTCCTGHN	0.877216	0.731014	0.877216	0.731014	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_60.ASWTCCTGBT	homer_8.NRYTTCCGGH	0.868687	0.710744	0.781818	0.781818	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_60.ASWTCCTGBT	homer_9.MACAGGAAGT	0.838162	0.838162	0.838162	0.838162	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_60.ASWTCCTGBT	homer_10.ACTTCCKGKT	0.845968	0.845968	0.845968	0.845968	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_60.ASWTCCTGBT	homer_11.ACVAGGAAGT	0.799447	0.799447	0.799447	0.799447	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_60.ASWTCCTGBT	homer_12.YCTTATCTBN	0.321439	0.214293	0.257151	0.257151	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_60.ASWTCCTGBT	homer_13.NBWGATAAGR	0.333625	0.222417	0.266900	0.266900	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_60.ASWTCCTGBT	homer_14.TGGCAGTTGG	0.340988	0.227325	0.272790	0.272790	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_60.ASWTCCTGBT	homer_15.AVCCGGAAGT	0.810741	0.810741	0.810741	0.810741	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_60.ASWTCCTGBT	homer_16.ANCAGGAAGT	0.839469	0.839469	0.839469	0.839469	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_60.ASWTCCTGBT	homer_17.SAGATAAGRV	0.241025	0.197202	0.216922	0.216922	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_60.ASWTCCTGBT	homer_18.TGCTGAGTCA	0.395474	0.212947	0.276831	0.276831	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_60.ASWTCCTGBT	homer_19.GCTATTTTTAGC	0.260493	0.180341	0.234443	0.195370	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_60.ASWTCCTGBT	homer_20.GGCVGTTR	0.346154	0.220280	0.242308	0.302885	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_60.ASWTCCTGBT	homer_21.CYTGGCABNSTGCCAR	0.482061	0.255209	0.433855	0.271159	10	16	9	17	0.529412	0.900000	0.562500	R	-7	49
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_60.ASWTCCTGBT	homer_22.BBCTTATCTS	0.228129	0.186651	0.205316	0.205316	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_60.ASWTCCTGBT	homer_23.VACAGGAAAT	0.834536	0.834536	0.834536	0.834536	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_60.ASWTCCTGBT	homer_24.RGKGGGCGKGGC	0.268104	0.185610	0.241293	0.201078	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_60.ASWTCCTGBT	homer_25.AGATAASR	0.407305	0.203653	0.244383	0.305479	10	8	6	12	0.500000	0.600000	0.750000	R	-2	33
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_60.ASWTCCTGBT	homer_26.YGGCCCCGCCCC	0.266991	0.222493	0.266991	0.222493	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_60.ASWTCCTGBT	homer_27.AVCAGGAAGT	0.853699	0.853699	0.853699	0.853699	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_60.ASWTCCTGBT	homer_28.RGKGGGCGGAGC	0.319469	0.221171	0.287522	0.239602	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_60.ASWTCCTGBT	homer_29.AWWWTGCTGAGTCAT	0.341561	0.227707	0.341561	0.227707	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_60.ASWTCCTGBT	homer_30.CAAAGGTCAG	0.343066	0.184728	0.240146	0.240146	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_60.ASWTCCTGBT	homer_31.VTGACTCATC	0.272488	0.181659	0.217991	0.217991	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_60.ASWTCCTGBT	homer_32.AAAGRGGAAGTG	0.692967	0.577473	0.692967	0.577473	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_60.ASWTCCTGBT	homer_33.GRAASTGAAAST	0.478402	0.398668	0.478402	0.398668	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_60.ASWTCCTGBT	homer_34.CCCCTCCCCCAC	0.284837	0.237364	0.284837	0.237364	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_60.ASWTCCTGBT	homer_35.GAAAGTGAAAGT	0.466668	0.388890	0.466668	0.388890	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_60.ASWTCCTGBT	homer_36.DATGASTCATHN	0.247410	0.171284	0.222669	0.185558	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_60.ASWTCCTGBT	homer_37.NDATGASTCAYN	0.247370	0.141354	0.197896	0.164913	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_60.ASWTCCTGBT	homer_38.RATGASTCAT	0.224300	0.149534	0.179440	0.179440	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_60.ASWTCCTGBT	homer_39.DATGASTCAT	0.229747	0.153165	0.183798	0.183798	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_60.ASWTCCTGBT	homer_40.AGTTTCAKTTTC	0.497810	0.414841	0.497810	0.414841	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_60.ASWTCCTGBT	homer_41.NNATGASTCATH	0.236948	0.164041	0.213253	0.177711	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_60.ASWTCCTGBT	homer_42.SAAACCACAG	0.326887	0.217925	0.261510	0.261510	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_60.ASWTCCTGBT	homer_43.GAAASYGAAASY	0.492626	0.410522	0.492626	0.410522	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_60.ASWTCCTGBT	homer_44.AVCAGCTG	0.484185	0.308118	0.338930	0.423662	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_60.ASWTCCTGBT	homer_45.SGTCACGTGR	0.259964	0.212698	0.233967	0.233967	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_60.ASWTCCTGBT	homer_46.NATGASTCABNN	0.196916	0.136326	0.177224	0.147687	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_60.ASWTCCTGBT	homer_47.GATGASTCATCN	0.253371	0.175411	0.228034	0.190028	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_60.ASWTCCTGBT	homer_48.AGTTTCASTTTC	0.492387	0.410323	0.492387	0.410323	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_60.ASWTCCTGBT	homer_49.RCAGGATGTGGT	0.862810	0.597330	0.776529	0.647107	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_60.ASWTCCTGBT	homer_50.GGGGGAATCCCC	0.409071	0.283203	0.368164	0.306803	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_60.ASWTCCTGBT	homer_51.GCTGTGGTTW	0.275410	0.225335	0.247869	0.247869	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_60.ASWTCCTGBT	homer_52.GGATGACTCATC	0.263413	0.182363	0.237072	0.197560	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_60.ASWTCCTGBT	homer_53.NWAACCACADNN	0.279380	0.232816	0.279380	0.232816	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_60.ASWTCCTGBT	homer_54.ACCATCTGTT	0.327069	0.327069	0.327069	0.327069	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_60.ASWTCCTGBT	homer_55.SVYTTCCNGGAARB	0.693798	0.495570	0.693798	0.495570	10	14	10	14	0.714286	1.000000	0.714286	R	0	45
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_60.ASWTCCTGBT	homer_56.SCCTAGCAACAG	0.301072	0.250893	0.301072	0.250893	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_60.ASWTCCTGBT	homer_57.AAACCACARM	0.335595	0.274578	0.302035	0.302035	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_60.ASWTCCTGBT	homer_58.RTTATGYAAB	0.280002	0.186668	0.224002	0.224002	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_60.ASWTCCTGBT	homer_59.NYTTCCWGGAAR	0.679645	0.566371	0.679645	0.566371	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_60.ASWTCCTGBT	homer_60.ASWTCCTGBT	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_60.ASWTCCTGBT	homer_61.DGGGYGKGGC	0.468535	0.252288	0.327974	0.327974	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_60.ASWTCCTGBT	homer_62.TWGTCTGV	0.340479	0.272383	0.272383	0.340479	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_60.ASWTCCTGBT	homer_63.CTGGCAGSCTGCCA	0.523049	0.261525	0.418440	0.298885	10	14	8	16	0.500000	0.800000	0.571429	R	-6	45
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_60.ASWTCCTGBT	homer_64.VGGGRATTYCCC	0.491696	0.280969	0.393357	0.327797	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_60.ASWTCCTGBT	homer_65.CARRGKBCAAAGTYCA	0.203749	0.127343	0.203749	0.127343	10	16	10	16	0.625000	1.000000	0.625000	R	-1	49
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_60.ASWTCCTGBT	homer_66.CCATTGTTNY	0.225961	0.225961	0.225961	0.225961	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_60.ASWTCCTGBT	homer_67.CYAAAAATAG	0.351247	0.234165	0.280997	0.280997	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_60.ASWTCCTGBT	homer_68.GGGGGGGG	0.402034	0.201017	0.241220	0.301525	10	8	6	12	0.500000	0.600000	0.750000	R	-2	33
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_60.ASWTCCTGBT	homer_69.TTGAMCTTTG	0.371944	0.200278	0.260361	0.260361	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_60.ASWTCCTGBT	homer_70.MGGAAGTGAAAC	0.812419	0.379129	0.568693	0.473911	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_60.ASWTCCTGBT	homer_71.HACTTCCGGY	0.837265	0.685035	0.753538	0.753538	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_60.ASWTCCTGBT	homer_72.NRYTTCCGGY	0.849994	0.695449	0.764994	0.764994	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_60.ASWTCCTGBT	homer_73.AWWNTGCTGAGTCAT	0.387613	0.258408	0.387613	0.258408	10	15	10	15	0.666667	1.000000	0.666667	D	-1	47
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_60.ASWTCCTGBT	homer_74.AGGCCTAG	0.340320	0.272256	0.272256	0.340320	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_60.ASWTCCTGBT	homer_75.VTTACGTAAYNNNNN	0.275799	0.107255	0.193059	0.128706	10	15	7	18	0.388889	0.700000	0.466667	D	-8	47
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_60.ASWTCCTGBT	homer_76.TGCTGACTCA	0.444592	0.239396	0.311215	0.311215	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_60.ASWTCCTGBT	homer_77.ATTGCGCAAC	0.181004	0.148094	0.162904	0.162904	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_61.DGGGYGKGGC	homer_1.ATTTCCTGTN	0.311208	0.167574	0.217846	0.217846	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_61.DGGGYGKGGC	homer_2.ACCGGAAGTG	0.431345	0.287564	0.345076	0.345076	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_61.DGGGYGKGGC	homer_3.AACCGGAAGT	0.427857	0.230385	0.299500	0.299500	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_61.DGGGYGKGGC	homer_4.ACAGGAAGTG	0.544569	0.363046	0.435655	0.435655	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_61.DGGGYGKGGC	homer_5.RACCGGAAGT	0.462226	0.248891	0.323558	0.323558	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_61.DGGGYGKGGC	homer_6.AGAGGAAGTG	0.551213	0.367475	0.440971	0.440971	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_61.DGGGYGKGGC	homer_7.NNAYTTCCTGHN	0.405755	0.280908	0.365180	0.304317	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_61.DGGGYGKGGC	homer_8.NRYTTCCGGH	0.395354	0.263569	0.316283	0.316283	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_61.DGGGYGKGGC	homer_9.MACAGGAAGT	0.489986	0.263839	0.342990	0.342990	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_61.DGGGYGKGGC	homer_10.ACTTCCKGKT	0.473952	0.255205	0.331766	0.331766	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_61.DGGGYGKGGC	homer_11.ACVAGGAAGT	0.484858	0.261077	0.339401	0.339401	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_61.DGGGYGKGGC	homer_12.YCTTATCTBN	0.156441	0.127997	0.140797	0.140797	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_61.DGGGYGKGGC	homer_13.NBWGATAAGR	0.123706	0.101214	0.111335	0.111335	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_61.DGGGYGKGGC	homer_14.TGGCAGTTGG	0.316898	0.316898	0.316898	0.316898	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_61.DGGGYGKGGC	homer_15.AVCCGGAAGT	0.411949	0.221818	0.288364	0.288364	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_61.DGGGYGKGGC	homer_16.ANCAGGAAGT	0.468543	0.252292	0.327980	0.327980	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_61.DGGGYGKGGC	homer_17.SAGATAAGRV	0.148759	0.148759	0.148759	0.148759	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_61.DGGGYGKGGC	homer_18.TGCTGAGTCA	0.376527	0.308068	0.338875	0.338875	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_61.DGGGYGKGGC	homer_19.GCTATTTTTAGC	0.984809	0.098481	0.196962	0.164135	10	12	2	20	0.100000	0.200000	0.166667	R	8	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_61.DGGGYGKGGC	homer_20.GGCVGTTR	0.363429	0.290743	0.290743	0.363429	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_61.DGGGYGKGGC	homer_21.CYTGGCABNSTGCCAR	0.327786	0.204866	0.327786	0.204866	10	16	10	16	0.625000	1.000000	0.625000	D	-1	49
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_61.DGGGYGKGGC	homer_22.BBCTTATCTS	0.132296	0.132296	0.132296	0.132296	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_61.DGGGYGKGGC	homer_23.VACAGGAAAT	0.345839	0.186221	0.242088	0.242088	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_61.DGGGYGKGGC	homer_24.RGKGGGCGKGGC	0.952080	0.793400	0.952080	0.793400	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_61.DGGGYGKGGC	homer_25.AGATAASR	0.090863	0.072691	0.072691	0.090863	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_61.DGGGYGKGGC	homer_26.YGGCCCCGCCCC	0.894940	0.745783	0.894940	0.745783	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_61.DGGGYGKGGC	homer_27.AVCAGGAAGT	0.432743	0.233015	0.302920	0.302920	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_61.DGGGYGKGGC	homer_28.RGKGGGCGGAGC	0.827955	0.689963	0.827955	0.689963	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_61.DGGGYGKGGC	homer_29.AWWWTGCTGAGTCAT	0.369853	0.246569	0.369853	0.246569	10	15	10	15	0.666667	1.000000	0.666667	D	-3	47
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_61.DGGGYGKGGC	homer_30.CAAAGGTCAG	0.331836	0.221224	0.265469	0.265469	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_61.DGGGYGKGGC	homer_31.VTGACTCATC	0.403601	0.269067	0.322880	0.322880	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_61.DGGGYGKGGC	homer_32.AAAGRGGAAGTG	0.474698	0.271256	0.379759	0.316465	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_61.DGGGYGKGGC	homer_33.GRAASTGAAAST	0.237766	0.164607	0.213989	0.178324	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_61.DGGGYGKGGC	homer_34.CCCCTCCCCCAC	0.763221	0.528384	0.686899	0.572416	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_61.DGGGYGKGGC	homer_35.GAAAGTGAAAGT	0.132124	0.091470	0.118911	0.099093	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_61.DGGGYGKGGC	homer_36.DATGASTCATHN	0.344860	0.238749	0.310374	0.258645	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_61.DGGGYGKGGC	homer_37.NDATGASTCAYN	0.317916	0.220096	0.286124	0.238437	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_61.DGGGYGKGGC	homer_38.RATGASTCAT	0.362658	0.241772	0.290126	0.290126	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_61.DGGGYGKGGC	homer_39.DATGASTCAT	0.329699	0.219799	0.263759	0.263759	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_61.DGGGYGKGGC	homer_40.AGTTTCAKTTTC	0.252511	0.094692	0.151506	0.126255	10	12	6	16	0.375000	0.600000	0.500000	D	4	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_61.DGGGYGKGGC	homer_41.NNATGASTCATH	0.290295	0.200973	0.261265	0.217721	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_61.DGGGYGKGGC	homer_42.SAAACCACAG	0.559324	0.301174	0.391526	0.391526	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_61.DGGGYGKGGC	homer_43.GAAASYGAAASY	0.167835	0.095906	0.134268	0.111890	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_61.DGGGYGKGGC	homer_44.AVCAGCTG	0.238435	0.190748	0.190748	0.238435	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_61.DGGGYGKGGC	homer_45.SGTCACGTGR	0.316671	0.259094	0.285004	0.285004	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_61.DGGGYGKGGC	homer_46.NATGASTCABNN	0.345517	0.239204	0.310966	0.259138	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_61.DGGGYGKGGC	homer_47.GATGASTCATCN	0.380021	0.263091	0.342019	0.285016	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_61.DGGGYGKGGC	homer_48.AGTTTCASTTTC	0.267088	0.100158	0.160253	0.133544	10	12	6	16	0.375000	0.600000	0.500000	D	4	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_61.DGGGYGKGGC	homer_49.RCAGGATGTGGT	0.645395	0.537829	0.645395	0.537829	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_61.DGGGYGKGGC	homer_50.GGGGGAATCCCC	0.507237	0.351164	0.456514	0.380428	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_61.DGGGYGKGGC	homer_51.GCTGTGGTTW	0.538827	0.359218	0.431061	0.431061	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_61.DGGGYGKGGC	homer_52.GGATGACTCATC	0.359353	0.248783	0.323417	0.269514	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_61.DGGGYGKGGC	homer_53.NWAACCACADNN	0.517785	0.358467	0.466007	0.388339	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_61.DGGGYGKGGC	homer_54.ACCATCTGTT	0.261889	0.174593	0.209511	0.209511	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_61.DGGGYGKGGC	homer_55.SVYTTCCNGGAARB	0.321853	0.160927	0.257482	0.183916	10	14	8	16	0.500000	0.800000	0.571429	R	-6	45
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_61.DGGGYGKGGC	homer_56.SCCTAGCAACAG	0.476258	0.222254	0.333381	0.277817	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_61.DGGGYGKGGC	homer_57.AAACCACARM	0.550044	0.366696	0.440035	0.440035	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_61.DGGGYGKGGC	homer_58.RTTATGYAAB	0.326769	0.108923	0.163385	0.163385	10	10	5	15	0.333333	0.500000	0.500000	R	5	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_61.DGGGYGKGGC	homer_59.NYTTCCWGGAAR	0.314592	0.146810	0.220215	0.183512	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_61.DGGGYGKGGC	homer_60.ASWTCCTGBT	0.468535	0.252288	0.327974	0.327974	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_61.DGGGYGKGGC	homer_61.DGGGYGKGGC	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_61.DGGGYGKGGC	homer_62.TWGTCTGV	0.391469	0.249116	0.274028	0.342535	10	8	7	11	0.636364	0.700000	0.875000	D	-1	33
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_61.DGGGYGKGGC	homer_63.CTGGCAGSCTGCCA	0.285073	0.203623	0.285073	0.203623	10	14	10	14	0.714286	1.000000	0.714286	D	-1	45
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_61.DGGGYGKGGC	homer_64.VGGGRATTYCCC	0.544450	0.453708	0.544450	0.453708	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_61.DGGGYGKGGC	homer_65.CARRGKBCAAAGTYCA	0.397941	0.146610	0.278559	0.174099	10	16	7	19	0.368421	0.700000	0.437500	D	3	49
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_61.DGGGYGKGGC	homer_66.CCATTGTTNY	0.160755	0.160755	0.160755	0.160755	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_61.DGGGYGKGGC	homer_67.CYAAAAATAG	0.840211	0.148272	0.252063	0.252063	10	10	3	17	0.176471	0.300000	0.300000	R	-7	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_61.DGGGYGKGGC	homer_68.GGGGGGGG	0.824826	0.659861	0.659861	0.824826	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_61.DGGGYGKGGC	homer_69.TTGAMCTTTG	0.247428	0.164952	0.197942	0.197942	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_61.DGGGYGKGGC	homer_70.MGGAAGTGAAAC	0.358000	0.298334	0.358000	0.298334	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_61.DGGGYGKGGC	homer_71.HACTTCCGGY	0.362504	0.241669	0.290003	0.290003	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_61.DGGGYGKGGC	homer_72.NRYTTCCGGY	0.310208	0.206806	0.248167	0.248167	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_61.DGGGYGKGGC	homer_73.AWWNTGCTGAGTCAT	0.380187	0.253458	0.380187	0.253458	10	15	10	15	0.666667	1.000000	0.666667	D	-3	47
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_61.DGGGYGKGGC	homer_74.AGGCCTAG	0.447981	0.358385	0.358385	0.447981	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_61.DGGGYGKGGC	homer_75.VTTACGTAAYNNNNN	0.232439	0.154960	0.232439	0.154960	10	15	10	15	0.666667	1.000000	0.666667	R	0	47
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_61.DGGGYGKGGC	homer_76.TGCTGACTCA	0.539306	0.231131	0.323584	0.323584	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_61.DGGGYGKGGC	homer_77.ATTGCGCAAC	0.324902	0.174947	0.227432	0.227432	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_62.TWGTCTGV	homer_1.ATTTCCTGTN	0.410559	0.328447	0.410559	0.328447	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_62.TWGTCTGV	homer_2.ACCGGAAGTG	0.212338	0.169871	0.212338	0.169871	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_62.TWGTCTGV	homer_3.AACCGGAAGT	0.550740	0.157354	0.275370	0.220296	8	10	4	14	0.285714	0.500000	0.400000	D	-6	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_62.TWGTCTGV	homer_4.ACAGGAAGTG	0.295748	0.236598	0.295748	0.236598	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_62.TWGTCTGV	homer_5.RACCGGAAGT	0.196466	0.157173	0.196466	0.157173	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_62.TWGTCTGV	homer_6.AGAGGAAGTG	0.200912	0.160730	0.200912	0.160730	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_62.TWGTCTGV	homer_7.NNAYTTCCTGHN	0.280708	0.187139	0.280708	0.187139	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_62.TWGTCTGV	homer_8.NRYTTCCGGH	0.252097	0.201678	0.252097	0.201678	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_62.TWGTCTGV	homer_9.MACAGGAAGT	0.363290	0.290632	0.363290	0.290632	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_62.TWGTCTGV	homer_10.ACTTCCKGKT	0.219513	0.175610	0.219513	0.175610	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_62.TWGTCTGV	homer_11.ACVAGGAAGT	0.223190	0.178552	0.223190	0.178552	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_62.TWGTCTGV	homer_12.YCTTATCTBN	0.496038	0.396830	0.496038	0.396830	8	10	8	10	0.800000	1.000000	0.800000	D	-2	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_62.TWGTCTGV	homer_13.NBWGATAAGR	0.467747	0.374197	0.467747	0.374197	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_62.TWGTCTGV	homer_14.TGGCAGTTGG	0.460305	0.292921	0.402767	0.322213	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_62.TWGTCTGV	homer_15.AVCCGGAAGT	0.198760	0.159008	0.198760	0.159008	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_62.TWGTCTGV	homer_16.ANCAGGAAGT	0.324146	0.259317	0.324146	0.259317	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_62.TWGTCTGV	homer_17.SAGATAAGRV	0.510900	0.325118	0.447037	0.357630	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_62.TWGTCTGV	homer_18.TGCTGAGTCA	0.348895	0.279116	0.348895	0.279116	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_62.TWGTCTGV	homer_19.GCTATTTTTAGC	0.586540	0.195513	0.366587	0.244391	8	12	5	15	0.333333	0.625000	0.416667	D	3	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_62.TWGTCTGV	homer_20.GGCVGTTR	0.478894	0.287336	0.359170	0.359170	8	8	6	10	0.600000	0.750000	0.750000	D	2	29
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_62.TWGTCTGV	homer_21.CYTGGCABNSTGCCAR	0.578884	0.289442	0.578884	0.289442	8	16	8	16	0.500000	1.000000	0.500000	R	0	45
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_62.TWGTCTGV	homer_22.BBCTTATCTS	0.497557	0.316627	0.435363	0.348290	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_62.TWGTCTGV	homer_23.VACAGGAAAT	0.378421	0.302737	0.378421	0.302737	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_62.TWGTCTGV	homer_24.RGKGGGCGKGGC	0.277896	0.185264	0.277896	0.185264	8	12	8	12	0.666667	1.000000	0.666667	D	-2	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_62.TWGTCTGV	homer_25.AGATAASR	0.535331	0.321199	0.401498	0.401498	8	8	6	10	0.600000	0.750000	0.750000	R	-2	29
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_62.TWGTCTGV	homer_26.YGGCCCCGCCCC	0.369292	0.246194	0.369292	0.246194	8	12	8	12	0.666667	1.000000	0.666667	R	0	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_62.TWGTCTGV	homer_27.AVCAGGAAGT	0.267783	0.214227	0.267783	0.214227	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_62.TWGTCTGV	homer_28.RGKGGGCGGAGC	0.382054	0.254703	0.382054	0.254703	8	12	8	12	0.666667	1.000000	0.666667	D	-2	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_62.TWGTCTGV	homer_29.AWWWTGCTGAGTCAT	0.454741	0.242529	0.454741	0.242529	8	15	8	15	0.533333	1.000000	0.533333	R	0	43
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_62.TWGTCTGV	homer_30.CAAAGGTCAG	0.780653	0.223044	0.390327	0.312261	8	10	4	14	0.285714	0.500000	0.400000	R	4	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_62.TWGTCTGV	homer_31.VTGACTCATC	0.391417	0.313133	0.391417	0.313133	8	10	8	10	0.800000	1.000000	0.800000	D	0	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_62.TWGTCTGV	homer_32.AAAGRGGAAGTG	0.622573	0.109866	0.233465	0.155643	8	12	3	17	0.176471	0.375000	0.250000	D	-9	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_62.TWGTCTGV	homer_33.GRAASTGAAAST	0.324789	0.174886	0.284190	0.189460	8	12	7	13	0.538462	0.875000	0.583333	R	1	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_62.TWGTCTGV	homer_34.CCCCTCCCCCAC	0.237870	0.158580	0.237870	0.158580	8	12	8	12	0.666667	1.000000	0.666667	R	0	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_62.TWGTCTGV	homer_35.GAAAGTGAAAGT	0.263943	0.142123	0.230950	0.153967	8	12	7	13	0.538462	0.875000	0.583333	R	1	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_62.TWGTCTGV	homer_36.DATGASTCATHN	0.355467	0.236978	0.355467	0.236978	8	12	8	12	0.666667	1.000000	0.666667	R	-2	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_62.TWGTCTGV	homer_37.NDATGASTCAYN	0.351964	0.234643	0.351964	0.234643	8	12	8	12	0.666667	1.000000	0.666667	R	-1	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_62.TWGTCTGV	homer_38.RATGASTCAT	0.370029	0.296023	0.370029	0.296023	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_62.TWGTCTGV	homer_39.DATGASTCAT	0.365904	0.292723	0.365904	0.292723	8	10	8	10	0.800000	1.000000	0.800000	R	0	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_62.TWGTCTGV	homer_40.AGTTTCAKTTTC	0.373883	0.201322	0.327148	0.218098	8	12	7	13	0.538462	0.875000	0.583333	D	1	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_62.TWGTCTGV	homer_41.NNATGASTCATH	0.358808	0.239206	0.358808	0.239206	8	12	8	12	0.666667	1.000000	0.666667	R	-1	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_62.TWGTCTGV	homer_42.SAAACCACAG	0.398981	0.319185	0.398981	0.319185	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_62.TWGTCTGV	homer_43.GAAASYGAAASY	0.284250	0.153058	0.248719	0.165813	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_62.TWGTCTGV	homer_44.AVCAGCTG	0.410576	0.319337	0.359254	0.359254	8	8	7	9	0.777778	0.875000	0.875000	R	1	29
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_62.TWGTCTGV	homer_45.SGTCACGTGR	0.416174	0.208087	0.312130	0.249704	8	10	6	12	0.500000	0.750000	0.600000	R	-4	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_62.TWGTCTGV	homer_46.NATGASTCABNN	0.372670	0.248447	0.372670	0.248447	8	12	8	12	0.666667	1.000000	0.666667	D	-1	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_62.TWGTCTGV	homer_47.GATGASTCATCN	0.360625	0.240417	0.360625	0.240417	8	12	8	12	0.666667	1.000000	0.666667	R	-2	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_62.TWGTCTGV	homer_48.AGTTTCASTTTC	0.386946	0.208356	0.338578	0.225718	8	12	7	13	0.538462	0.875000	0.583333	D	1	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_62.TWGTCTGV	homer_49.RCAGGATGTGGT	0.349340	0.232893	0.349340	0.232893	8	12	8	12	0.666667	1.000000	0.666667	D	-1	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_62.TWGTCTGV	homer_50.GGGGGAATCCCC	0.167960	0.111973	0.167960	0.111973	8	12	8	12	0.666667	1.000000	0.666667	R	0	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_62.TWGTCTGV	homer_51.GCTGTGGTTW	0.647706	0.249118	0.404816	0.323853	8	10	5	13	0.384615	0.625000	0.500000	D	3	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_62.TWGTCTGV	homer_52.GGATGACTCATC	0.391170	0.260780	0.391170	0.260780	8	12	8	12	0.666667	1.000000	0.666667	D	-2	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_62.TWGTCTGV	homer_53.NWAACCACADNN	0.392752	0.261835	0.392752	0.261835	8	12	8	12	0.666667	1.000000	0.666667	R	0	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_62.TWGTCTGV	homer_54.ACCATCTGTT	0.419054	0.335243	0.419054	0.335243	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_62.TWGTCTGV	homer_55.SVYTTCCNGGAARB	0.302417	0.172810	0.302417	0.172810	8	14	8	14	0.571429	1.000000	0.571429	D	-2	41
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_62.TWGTCTGV	homer_56.SCCTAGCAACAG	0.352925	0.235283	0.352925	0.235283	8	12	8	12	0.666667	1.000000	0.666667	R	-2	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_62.TWGTCTGV	homer_57.AAACCACARM	0.453256	0.288436	0.396599	0.317279	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_62.TWGTCTGV	homer_58.RTTATGYAAB	0.251983	0.201587	0.251983	0.201587	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_62.TWGTCTGV	homer_59.NYTTCCWGGAAR	0.269919	0.179946	0.269919	0.179946	8	12	8	12	0.666667	1.000000	0.666667	D	-1	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_62.TWGTCTGV	homer_60.ASWTCCTGBT	0.340479	0.272383	0.340479	0.272383	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_62.TWGTCTGV	homer_61.DGGGYGKGGC	0.391469	0.249116	0.342535	0.274028	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_62.TWGTCTGV	homer_62.TWGTCTGV	1.000000	1.000000	1.000000	1.000000	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_62.TWGTCTGV	homer_63.CTGGCAGSCTGCCA	0.663833	0.379333	0.663833	0.379333	8	14	8	14	0.571429	1.000000	0.571429	D	0	41
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_62.TWGTCTGV	homer_64.VGGGRATTYCCC	0.155543	0.103695	0.155543	0.103695	8	12	8	12	0.666667	1.000000	0.666667	D	-1	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_62.TWGTCTGV	homer_65.CARRGKBCAAAGTYCA	0.381763	0.190882	0.381763	0.190882	8	16	8	16	0.500000	1.000000	0.500000	R	-2	45
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_62.TWGTCTGV	homer_66.CCATTGTTNY	0.494999	0.314999	0.433124	0.346499	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_62.TWGTCTGV	homer_67.CYAAAAATAG	0.641318	0.183234	0.320659	0.256527	8	10	4	14	0.285714	0.500000	0.400000	D	4	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_62.TWGTCTGV	homer_68.GGGGGGGG	0.321688	0.193013	0.241266	0.241266	8	8	6	10	0.600000	0.750000	0.750000	D	2	29
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_62.TWGTCTGV	homer_69.TTGAMCTTTG	0.258444	0.206755	0.258444	0.206755	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_62.TWGTCTGV	homer_70.MGGAAGTGAAAC	0.236791	0.157861	0.236791	0.157861	8	12	8	12	0.666667	1.000000	0.666667	R	-2	37
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_62.TWGTCTGV	homer_71.HACTTCCGGY	0.232175	0.185740	0.232175	0.185740	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_62.TWGTCTGV	homer_72.NRYTTCCGGY	0.256731	0.205384	0.256731	0.205384	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_62.TWGTCTGV	homer_73.AWWNTGCTGAGTCAT	0.471342	0.251382	0.471342	0.251382	8	15	8	15	0.533333	1.000000	0.533333	D	-2	43
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_62.TWGTCTGV	homer_74.AGGCCTAG	0.445359	0.445359	0.445359	0.445359	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_62.TWGTCTGV	homer_75.VTTACGTAAYNNNNN	0.324809	0.173231	0.324809	0.173231	8	15	8	15	0.533333	1.000000	0.533333	R	-1	43
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_62.TWGTCTGV	homer_76.TGCTGACTCA	0.504136	0.403309	0.504136	0.403309	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_62.TWGTCTGV	homer_77.ATTGCGCAAC	0.205962	0.164769	0.205962	0.164769	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_63.CTGGCAGSCTGCCA	homer_1.ATTTCCTGTN	0.427444	0.213722	0.244254	0.341955	14	10	8	16	0.500000	0.571429	0.800000	R	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_63.CTGGCAGSCTGCCA	homer_2.ACCGGAAGTG	0.517425	0.310455	0.332631	0.465683	14	10	9	15	0.600000	0.642857	0.900000	D	-1	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_63.CTGGCAGSCTGCCA	homer_3.AACCGGAAGT	0.492030	0.246015	0.281160	0.393624	14	10	8	16	0.500000	0.571429	0.800000	D	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_63.CTGGCAGSCTGCCA	homer_4.ACAGGAAGTG	0.482221	0.289333	0.309999	0.433999	14	10	9	15	0.600000	0.642857	0.900000	D	-1	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_63.CTGGCAGSCTGCCA	homer_5.RACCGGAAGT	0.534314	0.267157	0.305322	0.427451	14	10	8	16	0.500000	0.571429	0.800000	D	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_63.CTGGCAGSCTGCCA	homer_6.AGAGGAAGTG	0.464129	0.232065	0.265217	0.371304	14	10	8	16	0.500000	0.571429	0.800000	R	6	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_63.CTGGCAGSCTGCCA	homer_7.NNAYTTCCTGHN	0.485654	0.303534	0.346896	0.404712	14	12	10	16	0.625000	0.714286	0.833333	R	-2	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_63.CTGGCAGSCTGCCA	homer_8.NRYTTCCGGH	0.532213	0.319328	0.342137	0.478992	14	10	9	15	0.600000	0.642857	0.900000	R	-1	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_63.CTGGCAGSCTGCCA	homer_9.MACAGGAAGT	0.528901	0.264451	0.302229	0.423121	14	10	8	16	0.500000	0.571429	0.800000	D	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_63.CTGGCAGSCTGCCA	homer_10.ACTTCCKGKT	0.523353	0.261677	0.299059	0.418683	14	10	8	16	0.500000	0.571429	0.800000	R	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_63.CTGGCAGSCTGCCA	homer_11.ACVAGGAAGT	0.462690	0.231345	0.264394	0.370152	14	10	8	16	0.500000	0.571429	0.800000	D	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_63.CTGGCAGSCTGCCA	homer_12.YCTTATCTBN	0.274217	0.137109	0.156695	0.219374	14	10	8	16	0.500000	0.571429	0.800000	D	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_63.CTGGCAGSCTGCCA	homer_13.NBWGATAAGR	0.254591	0.127295	0.145480	0.203673	14	10	8	16	0.500000	0.571429	0.800000	R	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_63.CTGGCAGSCTGCCA	homer_14.TGGCAGTTGG	0.508284	0.363060	0.363060	0.508284	14	10	10	14	0.714286	0.714286	1.000000	R	4	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_63.CTGGCAGSCTGCCA	homer_15.AVCCGGAAGT	0.502815	0.251408	0.287323	0.402252	14	10	8	16	0.500000	0.571429	0.800000	D	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_63.CTGGCAGSCTGCCA	homer_16.ANCAGGAAGT	0.480325	0.240162	0.274471	0.384260	14	10	8	16	0.500000	0.571429	0.800000	D	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_63.CTGGCAGSCTGCCA	homer_17.SAGATAAGRV	0.174900	0.124929	0.124929	0.174900	14	10	10	14	0.714286	0.714286	1.000000	D	0	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_63.CTGGCAGSCTGCCA	homer_18.TGCTGAGTCA	0.245418	0.175299	0.175299	0.245418	14	10	10	14	0.714286	0.714286	1.000000	D	2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_63.CTGGCAGSCTGCCA	homer_19.GCTATTTTTAGC	0.652320	0.155314	0.232972	0.271800	14	12	5	21	0.238095	0.357143	0.416667	D	-7	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_63.CTGGCAGSCTGCCA	homer_20.GGCVGTTR	0.473040	0.270309	0.270309	0.473040	14	8	8	14	0.571429	0.571429	1.000000	R	5	41
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_63.CTGGCAGSCTGCCA	homer_21.CYTGGCABNSTGCCAR	0.945487	0.827301	0.945487	0.827301	14	16	14	16	0.875000	1.000000	0.875000	R	0	57
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_63.CTGGCAGSCTGCCA	homer_22.BBCTTATCTS	0.168500	0.120357	0.120357	0.168500	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_63.CTGGCAGSCTGCCA	homer_23.VACAGGAAAT	0.491108	0.245554	0.280633	0.392887	14	10	8	16	0.500000	0.571429	0.800000	D	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_63.CTGGCAGSCTGCCA	homer_24.RGKGGGCGKGGC	0.301179	0.220864	0.236640	0.276080	14	12	11	15	0.733333	0.785714	0.916667	D	-1	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_63.CTGGCAGSCTGCCA	homer_25.AGATAASR	0.179795	0.102740	0.102740	0.179795	14	8	8	14	0.571429	0.571429	1.000000	D	1	41
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_63.CTGGCAGSCTGCCA	homer_26.YGGCCCCGCCCC	0.304912	0.223602	0.239573	0.279502	14	12	11	15	0.733333	0.785714	0.916667	D	3	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_63.CTGGCAGSCTGCCA	homer_27.AVCAGGAAGT	0.500870	0.250435	0.286211	0.400696	14	10	8	16	0.500000	0.571429	0.800000	D	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_63.CTGGCAGSCTGCCA	homer_28.RGKGGGCGGAGC	0.404817	0.214315	0.260240	0.303613	14	12	9	17	0.529412	0.642857	0.750000	R	5	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_63.CTGGCAGSCTGCCA	homer_29.AWWWTGCTGAGTCAT	0.296758	0.156188	0.211970	0.197838	14	15	10	19	0.526316	0.714286	0.666667	R	-5	55
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_63.CTGGCAGSCTGCCA	homer_30.CAAAGGTCAG	0.299491	0.213922	0.213922	0.299491	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_63.CTGGCAGSCTGCCA	homer_31.VTGACTCATC	0.287225	0.205161	0.205161	0.287225	14	10	10	14	0.714286	0.714286	1.000000	D	0	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_63.CTGGCAGSCTGCCA	homer_32.AAAGRGGAAGTG	0.457052	0.203134	0.261172	0.304701	14	12	8	18	0.444444	0.571429	0.666667	R	6	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_63.CTGGCAGSCTGCCA	homer_33.GRAASTGAAAST	0.376500	0.167333	0.215143	0.251000	14	12	8	18	0.444444	0.571429	0.666667	D	-4	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_63.CTGGCAGSCTGCCA	homer_34.CCCCTCCCCCAC	0.267002	0.228859	0.228859	0.267002	14	12	12	14	0.857143	0.857143	1.000000	R	0	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_63.CTGGCAGSCTGCCA	homer_35.GAAAGTGAAAGT	0.371898	0.165288	0.212513	0.247932	14	12	8	18	0.444444	0.571429	0.666667	D	-4	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_63.CTGGCAGSCTGCCA	homer_36.DATGASTCATHN	0.259167	0.190056	0.203631	0.237570	14	12	11	15	0.733333	0.785714	0.916667	D	-1	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_63.CTGGCAGSCTGCCA	homer_37.NDATGASTCAYN	0.233482	0.171220	0.183450	0.214026	14	12	11	15	0.733333	0.785714	0.916667	R	-1	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_63.CTGGCAGSCTGCCA	homer_38.RATGASTCAT	0.257113	0.183652	0.183652	0.257113	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_63.CTGGCAGSCTGCCA	homer_39.DATGASTCAT	0.275300	0.196643	0.196643	0.275300	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_63.CTGGCAGSCTGCCA	homer_40.AGTTTCAKTTTC	0.280440	0.124640	0.160252	0.186960	14	12	8	18	0.444444	0.571429	0.666667	R	-4	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_63.CTGGCAGSCTGCCA	homer_41.NNATGASTCATH	0.238065	0.174581	0.187051	0.218226	14	12	11	15	0.733333	0.785714	0.916667	R	-1	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_63.CTGGCAGSCTGCCA	homer_42.SAAACCACAG	0.465547	0.232773	0.266027	0.372437	14	10	8	16	0.500000	0.571429	0.800000	R	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_63.CTGGCAGSCTGCCA	homer_43.GAAASYGAAASY	0.324784	0.144348	0.185591	0.216522	14	12	8	18	0.444444	0.571429	0.666667	D	-4	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_63.CTGGCAGSCTGCCA	homer_44.AVCAGCTG	0.376630	0.215217	0.215217	0.376630	14	8	8	14	0.571429	0.571429	1.000000	R	5	41
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_63.CTGGCAGSCTGCCA	homer_45.SGTCACGTGR	0.529916	0.176639	0.227107	0.317950	14	10	6	18	0.333333	0.428571	0.600000	R	-4	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_63.CTGGCAGSCTGCCA	homer_46.NATGASTCABNN	0.263075	0.192922	0.206702	0.241152	14	12	11	15	0.733333	0.785714	0.916667	D	-1	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_63.CTGGCAGSCTGCCA	homer_47.GATGASTCATCN	0.255504	0.187369	0.200753	0.234212	14	12	11	15	0.733333	0.785714	0.916667	D	-1	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_63.CTGGCAGSCTGCCA	homer_48.AGTTTCASTTTC	0.313318	0.139252	0.179039	0.208878	14	12	8	18	0.444444	0.571429	0.666667	R	-4	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_63.CTGGCAGSCTGCCA	homer_49.RCAGGATGTGGT	0.298278	0.218737	0.234361	0.273421	14	12	11	15	0.733333	0.785714	0.916667	D	-1	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_63.CTGGCAGSCTGCCA	homer_50.GGGGGAATCCCC	0.387824	0.332421	0.332421	0.387824	14	12	12	14	0.857143	0.857143	1.000000	D	2	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_63.CTGGCAGSCTGCCA	homer_51.GCTGTGGTTW	0.464905	0.191432	0.232453	0.325434	14	10	7	17	0.411765	0.500000	0.700000	D	-3	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_63.CTGGCAGSCTGCCA	homer_52.GGATGACTCATC	0.276311	0.172694	0.197365	0.230259	14	12	10	16	0.625000	0.714286	0.833333	D	-2	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_63.CTGGCAGSCTGCCA	homer_53.NWAACCACADNN	0.536249	0.238333	0.306428	0.357499	14	12	8	18	0.444444	0.571429	0.666667	R	-4	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_63.CTGGCAGSCTGCCA	homer_54.ACCATCTGTT	0.289233	0.206595	0.206595	0.289233	14	10	10	14	0.714286	0.714286	1.000000	D	3	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_63.CTGGCAGSCTGCCA	homer_55.SVYTTCCNGGAARB	0.638154	0.302284	0.410242	0.410242	14	14	9	19	0.473684	0.642857	0.642857	R	-5	53
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_63.CTGGCAGSCTGCCA	homer_56.SCCTAGCAACAG	0.486690	0.304181	0.347636	0.405575	14	12	10	16	0.625000	0.714286	0.833333	D	-2	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_63.CTGGCAGSCTGCCA	homer_57.AAACCACARM	0.499806	0.205803	0.249903	0.349865	14	10	7	17	0.411765	0.500000	0.700000	R	-3	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_63.CTGGCAGSCTGCCA	homer_58.RTTATGYAAB	0.216471	0.154622	0.154622	0.216471	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_63.CTGGCAGSCTGCCA	homer_59.NYTTCCWGGAAR	0.619766	0.275452	0.354152	0.413178	14	12	8	18	0.444444	0.571429	0.666667	R	-4	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_63.CTGGCAGSCTGCCA	homer_60.ASWTCCTGBT	0.523049	0.261525	0.298885	0.418440	14	10	8	16	0.500000	0.571429	0.800000	R	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_63.CTGGCAGSCTGCCA	homer_61.DGGGYGKGGC	0.285073	0.203623	0.203623	0.285073	14	10	10	14	0.714286	0.714286	1.000000	D	1	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_63.CTGGCAGSCTGCCA	homer_62.TWGTCTGV	0.663833	0.379333	0.379333	0.663833	14	8	8	14	0.571429	0.571429	1.000000	D	0	41
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_63.CTGGCAGSCTGCCA	homer_63.CTGGCAGSCTGCCA	1.000000	1.000000	1.000000	1.000000	14	14	14	14	1.000000	1.000000	1.000000	D	0	53
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_63.CTGGCAGSCTGCCA	homer_64.VGGGRATTYCCC	0.434207	0.372178	0.372178	0.434207	14	12	12	14	0.857143	0.857143	1.000000	R	2	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_63.CTGGCAGSCTGCCA	homer_65.CARRGKBCAAAGTYCA	0.424215	0.212107	0.303010	0.265134	14	16	10	20	0.500000	0.714286	0.625000	R	-6	57
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_63.CTGGCAGSCTGCCA	homer_66.CCATTGTTNY	0.340419	0.140173	0.170210	0.238294	14	10	7	17	0.411765	0.500000	0.700000	D	-3	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_63.CTGGCAGSCTGCCA	homer_67.CYAAAAATAG	0.672002	0.134400	0.192000	0.268801	14	10	4	20	0.200000	0.285714	0.400000	R	-6	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_63.CTGGCAGSCTGCCA	homer_68.GGGGGGGG	0.352539	0.201451	0.201451	0.352539	14	8	8	14	0.571429	0.571429	1.000000	D	2	41
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_63.CTGGCAGSCTGCCA	homer_69.TTGAMCTTTG	0.338796	0.241997	0.241997	0.338796	14	10	10	14	0.714286	0.714286	1.000000	D	0	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_63.CTGGCAGSCTGCCA	homer_70.MGGAAGTGAAAC	0.249285	0.213672	0.213672	0.249285	14	12	12	14	0.857143	0.857143	1.000000	R	2	49
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_63.CTGGCAGSCTGCCA	homer_71.HACTTCCGGY	0.487886	0.292732	0.313641	0.439097	14	10	9	15	0.600000	0.642857	0.900000	R	-1	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_63.CTGGCAGSCTGCCA	homer_72.NRYTTCCGGY	0.473067	0.283840	0.304115	0.425760	14	10	9	15	0.600000	0.642857	0.900000	R	-1	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_63.CTGGCAGSCTGCCA	homer_73.AWWNTGCTGAGTCAT	0.190824	0.155045	0.177194	0.165381	14	15	13	16	0.812500	0.928571	0.866667	D	-2	55
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_63.CTGGCAGSCTGCCA	homer_74.AGGCCTAG	0.455955	0.260546	0.260546	0.455955	14	8	8	14	0.571429	0.571429	1.000000	D	1	41
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_63.CTGGCAGSCTGCCA	homer_75.VTTACGTAAYNNNNN	0.189073	0.115545	0.148557	0.138654	14	15	11	18	0.611111	0.785714	0.733333	R	3	55
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_63.CTGGCAGSCTGCCA	homer_76.TGCTGACTCA	0.557531	0.278766	0.318589	0.446025	14	10	8	16	0.500000	0.571429	0.800000	D	-2	45
hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_63.CTGGCAGSCTGCCA	homer_77.ATTGCGCAAC	0.226524	0.161803	0.161803	0.226524	14	10	10	14	0.714286	0.714286	1.000000	R	0	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_64.VGGGRATTYCCC	homer_1.ATTTCCTGTN	0.564173	0.322385	0.376116	0.451339	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_64.VGGGRATTYCCC	homer_2.ACCGGAAGTG	0.443450	0.307004	0.332587	0.399105	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_64.VGGGRATTYCCC	homer_3.AACCGGAAGT	0.472330	0.269903	0.314887	0.377864	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_64.VGGGRATTYCCC	homer_4.ACAGGAAGTG	0.447399	0.309738	0.335549	0.402659	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_64.VGGGRATTYCCC	homer_5.RACCGGAAGT	0.506649	0.289514	0.337766	0.405319	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_64.VGGGRATTYCCC	homer_6.AGAGGAAGTG	0.470056	0.325423	0.352542	0.423050	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_64.VGGGRATTYCCC	homer_7.NNAYTTCCTGHN	0.483917	0.345655	0.403264	0.403264	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_64.VGGGRATTYCCC	homer_8.NRYTTCCGGH	0.542060	0.375273	0.406545	0.487854	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_64.VGGGRATTYCCC	homer_9.MACAGGAAGT	0.492013	0.281150	0.328008	0.393610	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_64.VGGGRATTYCCC	homer_10.ACTTCCKGKT	0.540211	0.308692	0.360140	0.432169	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_64.VGGGRATTYCCC	homer_11.ACVAGGAAGT	0.541771	0.309584	0.361181	0.433417	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_64.VGGGRATTYCCC	homer_12.YCTTATCTBN	0.206331	0.117903	0.137554	0.165065	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_64.VGGGRATTYCCC	homer_13.NBWGATAAGR	0.198838	0.113622	0.132559	0.159071	12	10	8	14	0.571429	0.666667	0.800000	R	4	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_64.VGGGRATTYCCC	homer_14.TGGCAGTTGG	0.285477	0.237898	0.237898	0.285477	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_64.VGGGRATTYCCC	homer_15.AVCCGGAAGT	0.469758	0.268433	0.313172	0.375806	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_64.VGGGRATTYCCC	homer_16.ANCAGGAAGT	0.540109	0.308634	0.360073	0.432087	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_64.VGGGRATTYCCC	homer_17.SAGATAAGRV	0.195989	0.135685	0.146992	0.176390	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_64.VGGGRATTYCCC	homer_18.TGCTGAGTCA	0.183024	0.152520	0.152520	0.183024	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_64.VGGGRATTYCCC	homer_19.GCTATTTTTAGC	0.126092	0.090065	0.105076	0.105076	12	12	10	14	0.714286	0.833333	0.833333	D	2	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_64.VGGGRATTYCCC	homer_20.GGCVGTTR	0.355783	0.237188	0.237188	0.355783	12	8	8	12	0.666667	0.666667	1.000000	D	1	37
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_64.VGGGRATTYCCC	homer_21.CYTGGCABNSTGCCAR	0.503316	0.377487	0.503316	0.377487	12	16	12	16	0.750000	1.000000	0.750000	D	-2	53
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_64.VGGGRATTYCCC	homer_22.BBCTTATCTS	0.188775	0.130690	0.141581	0.169897	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_64.VGGGRATTYCCC	homer_23.VACAGGAAAT	0.646562	0.301729	0.377161	0.452594	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_64.VGGGRATTYCCC	homer_24.RGKGGGCGKGGC	0.506369	0.361692	0.421974	0.421974	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_64.VGGGRATTYCCC	homer_25.AGATAASR	0.175740	0.117160	0.117160	0.175740	12	8	8	12	0.666667	0.666667	1.000000	R	4	37
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_64.VGGGRATTYCCC	homer_26.YGGCCCCGCCCC	0.393012	0.393012	0.393012	0.393012	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_64.VGGGRATTYCCC	homer_27.AVCAGGAAGT	0.551365	0.315066	0.367577	0.441092	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_64.VGGGRATTYCCC	homer_28.RGKGGGCGGAGC	0.346490	0.247493	0.288741	0.288741	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_64.VGGGRATTYCCC	homer_29.AWWWTGCTGAGTCAT	0.296023	0.148011	0.222017	0.177614	12	15	9	18	0.500000	0.750000	0.600000	R	-6	51
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_64.VGGGRATTYCCC	homer_30.CAAAGGTCAG	0.358199	0.204685	0.238799	0.286559	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_64.VGGGRATTYCCC	homer_31.VTGACTCATC	0.163205	0.136004	0.136004	0.163205	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_64.VGGGRATTYCCC	homer_32.AAAGRGGAAGTG	0.519130	0.311478	0.389347	0.389347	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_64.VGGGRATTYCCC	homer_33.GRAASTGAAAST	0.516807	0.258403	0.344538	0.344538	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_64.VGGGRATTYCCC	homer_34.CCCCTCCCCCAC	0.421659	0.252996	0.316244	0.316244	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_64.VGGGRATTYCCC	homer_35.GAAAGTGAAAGT	0.524117	0.262058	0.349411	0.349411	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_64.VGGGRATTYCCC	homer_36.DATGASTCATHN	0.173946	0.173946	0.173946	0.173946	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_64.VGGGRATTYCCC	homer_37.NDATGASTCAYN	0.179972	0.179972	0.179972	0.179972	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_64.VGGGRATTYCCC	homer_38.RATGASTCAT	0.234284	0.133876	0.156189	0.187427	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_64.VGGGRATTYCCC	homer_39.DATGASTCAT	0.208689	0.119251	0.139126	0.166951	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_64.VGGGRATTYCCC	homer_40.AGTTTCAKTTTC	0.509568	0.254784	0.339712	0.339712	12	12	8	16	0.500000	0.666667	0.666667	D	4	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_64.VGGGRATTYCCC	homer_41.NNATGASTCATH	0.157286	0.157286	0.157286	0.157286	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_64.VGGGRATTYCCC	homer_42.SAAACCACAG	0.313253	0.261044	0.261044	0.313253	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_64.VGGGRATTYCCC	homer_43.GAAASYGAAASY	0.481832	0.240916	0.321221	0.321221	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_64.VGGGRATTYCCC	homer_44.AVCAGCTG	0.384832	0.128277	0.160347	0.240520	12	8	5	15	0.333333	0.416667	0.625000	R	-3	37
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_64.VGGGRATTYCCC	homer_45.SGTCACGTGR	0.313329	0.146220	0.182775	0.219330	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_64.VGGGRATTYCCC	homer_46.NATGASTCABNN	0.236516	0.141910	0.177387	0.177387	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_64.VGGGRATTYCCC	homer_47.GATGASTCATCN	0.192915	0.192915	0.192915	0.192915	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_64.VGGGRATTYCCC	homer_48.AGTTTCASTTTC	0.486795	0.243397	0.324530	0.324530	12	12	8	16	0.500000	0.666667	0.666667	D	4	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_64.VGGGRATTYCCC	homer_49.RCAGGATGTGGT	0.259624	0.185446	0.216354	0.216354	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_64.VGGGRATTYCCC	homer_50.GGGGGAATCCCC	0.854297	0.854297	0.854297	0.854297	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_64.VGGGRATTYCCC	homer_51.GCTGTGGTTW	0.332323	0.230070	0.249242	0.299090	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_64.VGGGRATTYCCC	homer_52.GGATGACTCATC	0.190382	0.190382	0.190382	0.190382	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_64.VGGGRATTYCCC	homer_53.NWAACCACADNN	0.427058	0.213529	0.284705	0.284705	12	12	8	16	0.500000	0.666667	0.666667	R	-4	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_64.VGGGRATTYCCC	homer_54.ACCATCTGTT	0.488263	0.143607	0.203443	0.244131	12	10	5	17	0.294118	0.416667	0.500000	R	-5	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_64.VGGGRATTYCCC	homer_55.SVYTTCCNGGAARB	0.641952	0.285312	0.427968	0.366830	12	14	8	18	0.444444	0.666667	0.571429	D	4	49
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_64.VGGGRATTYCCC	homer_56.SCCTAGCAACAG	0.278014	0.166808	0.208510	0.208510	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_64.VGGGRATTYCCC	homer_57.AAACCACARM	0.375330	0.259844	0.281498	0.337797	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_64.VGGGRATTYCCC	homer_58.RTTATGYAAB	0.260997	0.121798	0.152248	0.182698	12	10	7	15	0.466667	0.583333	0.700000	R	5	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_64.VGGGRATTYCCC	homer_59.NYTTCCWGGAAR	0.666729	0.274536	0.388925	0.388925	12	12	7	17	0.411765	0.583333	0.583333	D	5	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_64.VGGGRATTYCCC	homer_60.ASWTCCTGBT	0.491696	0.280969	0.327797	0.393357	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_64.VGGGRATTYCCC	homer_61.DGGGYGKGGC	0.544450	0.453708	0.453708	0.544450	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_64.VGGGRATTYCCC	homer_62.TWGTCTGV	0.155543	0.103695	0.103695	0.155543	12	8	8	12	0.666667	0.666667	1.000000	D	1	37
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_64.VGGGRATTYCCC	homer_63.CTGGCAGSCTGCCA	0.434207	0.372178	0.434207	0.372178	12	14	12	14	0.857143	1.000000	0.857143	R	0	49
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_64.VGGGRATTYCCC	homer_64.VGGGRATTYCCC	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_64.VGGGRATTYCCC	homer_65.CARRGKBCAAAGTYCA	0.315063	0.203865	0.288808	0.216606	12	16	11	17	0.647059	0.916667	0.687500	R	1	53
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_64.VGGGRATTYCCC	homer_66.CCATTGTTNY	0.642822	0.101498	0.160706	0.192847	12	10	3	19	0.157895	0.250000	0.300000	R	-7	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_64.VGGGRATTYCCC	homer_67.CYAAAAATAG	0.773012	0.122055	0.193253	0.231904	12	10	3	19	0.157895	0.250000	0.300000	R	-7	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_64.VGGGRATTYCCC	homer_68.GGGGGGGG	0.812446	0.270815	0.338519	0.507779	12	8	5	15	0.333333	0.416667	0.625000	D	-3	37
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_64.VGGGRATTYCCC	homer_69.TTGAMCTTTG	0.393317	0.183548	0.229435	0.275322	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_64.VGGGRATTYCCC	homer_70.MGGAAGTGAAAC	0.542454	0.223363	0.316432	0.316432	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_64.VGGGRATTYCCC	homer_71.HACTTCCGGY	0.475789	0.329393	0.356842	0.428210	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_64.VGGGRATTYCCC	homer_72.NRYTTCCGGY	0.480765	0.332837	0.360574	0.432688	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_64.VGGGRATTYCCC	homer_73.AWWNTGCTGAGTCAT	0.153075	0.122460	0.153075	0.122460	12	15	12	15	0.800000	1.000000	0.800000	D	-3	51
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_64.VGGGRATTYCCC	homer_74.AGGCCTAG	0.398323	0.214482	0.232355	0.348533	12	8	7	13	0.538462	0.583333	0.875000	R	-1	37
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_64.VGGGRATTYCCC	homer_75.VTTACGTAAYNNNNN	0.201439	0.161151	0.201439	0.161151	12	15	12	15	0.800000	1.000000	0.800000	R	0	51
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_64.VGGGRATTYCCC	homer_76.TGCTGACTCA	0.202428	0.140142	0.151821	0.182185	12	10	9	13	0.692308	0.750000	0.900000	R	3	41
hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_64.VGGGRATTYCCC	homer_77.ATTGCGCAAC	0.444804	0.207575	0.259469	0.311363	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_65.CARRGKBCAAAGTYCA	homer_1.ATTTCCTGTN	0.320311	0.169577	0.180175	0.288280	16	10	9	17	0.529412	0.562500	0.900000	R	7	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_65.CARRGKBCAAAGTYCA	homer_2.ACCGGAAGTG	0.242974	0.151859	0.151859	0.242974	16	10	10	16	0.625000	0.625000	1.000000	D	4	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_65.CARRGKBCAAAGTYCA	homer_3.AACCGGAAGT	0.356751	0.222969	0.222969	0.356751	16	10	10	16	0.625000	0.625000	1.000000	D	3	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_65.CARRGKBCAAAGTYCA	homer_4.ACAGGAAGTG	0.296867	0.185542	0.185542	0.296867	16	10	10	16	0.625000	0.625000	1.000000	D	4	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_65.CARRGKBCAAAGTYCA	homer_5.RACCGGAAGT	0.318596	0.199122	0.199122	0.318596	16	10	10	16	0.625000	0.625000	1.000000	D	3	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_65.CARRGKBCAAAGTYCA	homer_6.AGAGGAAGTG	0.320400	0.200250	0.200250	0.320400	16	10	10	16	0.625000	0.625000	1.000000	D	4	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_65.CARRGKBCAAAGTYCA	homer_7.NNAYTTCCTGHN	0.202832	0.152124	0.152124	0.202832	16	12	12	16	0.750000	0.750000	1.000000	R	2	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_65.CARRGKBCAAAGTYCA	homer_8.NRYTTCCGGH	0.260790	0.115907	0.130395	0.208632	16	10	8	18	0.444444	0.500000	0.800000	D	8	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_65.CARRGKBCAAAGTYCA	homer_9.MACAGGAAGT	0.297063	0.157269	0.167098	0.267357	16	10	9	17	0.529412	0.562500	0.900000	D	7	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_65.CARRGKBCAAAGTYCA	homer_10.ACTTCCKGKT	0.349785	0.218615	0.218615	0.349785	16	10	10	16	0.625000	0.625000	1.000000	R	3	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_65.CARRGKBCAAAGTYCA	homer_11.ACVAGGAAGT	0.383010	0.239381	0.239381	0.383010	16	10	10	16	0.625000	0.625000	1.000000	D	3	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_65.CARRGKBCAAAGTYCA	homer_12.YCTTATCTBN	0.349353	0.218346	0.218346	0.349353	16	10	10	16	0.625000	0.625000	1.000000	R	1	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_65.CARRGKBCAAAGTYCA	homer_13.NBWGATAAGR	0.338672	0.211670	0.211670	0.338672	16	10	10	16	0.625000	0.625000	1.000000	D	1	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_65.CARRGKBCAAAGTYCA	homer_14.TGGCAGTTGG	0.510516	0.319072	0.319072	0.510516	16	10	10	16	0.625000	0.625000	1.000000	R	6	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_65.CARRGKBCAAAGTYCA	homer_15.AVCCGGAAGT	0.334013	0.208758	0.208758	0.334013	16	10	10	16	0.625000	0.625000	1.000000	D	3	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_65.CARRGKBCAAAGTYCA	homer_16.ANCAGGAAGT	0.330599	0.206624	0.206624	0.330599	16	10	10	16	0.625000	0.625000	1.000000	D	3	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_65.CARRGKBCAAAGTYCA	homer_17.SAGATAAGRV	0.299197	0.186998	0.186998	0.299197	16	10	10	16	0.625000	0.625000	1.000000	D	2	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_65.CARRGKBCAAAGTYCA	homer_18.TGCTGAGTCA	0.315217	0.197011	0.197011	0.315217	16	10	10	16	0.625000	0.625000	1.000000	D	5	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_65.CARRGKBCAAAGTYCA	homer_19.GCTATTTTTAGC	0.249731	0.187298	0.187298	0.249731	16	12	12	16	0.750000	0.750000	1.000000	R	4	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_65.CARRGKBCAAAGTYCA	homer_20.GGCVGTTR	0.499432	0.249716	0.249716	0.499432	16	8	8	16	0.500000	0.500000	1.000000	R	7	45
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_65.CARRGKBCAAAGTYCA	homer_21.CYTGGCABNSTGCCAR	0.318976	0.281450	0.299040	0.299040	16	16	15	17	0.882353	0.937500	0.937500	D	1	61
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_65.CARRGKBCAAAGTYCA	homer_22.BBCTTATCTS	0.318128	0.198830	0.198830	0.318128	16	10	10	16	0.625000	0.625000	1.000000	R	2	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_65.CARRGKBCAAAGTYCA	homer_23.VACAGGAAAT	0.227799	0.142374	0.142374	0.227799	16	10	10	16	0.625000	0.625000	1.000000	D	2	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_65.CARRGKBCAAAGTYCA	homer_24.RGKGGGCGKGGC	0.225082	0.168812	0.168812	0.225082	16	12	12	16	0.750000	0.750000	1.000000	D	1	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_65.CARRGKBCAAAGTYCA	homer_25.AGATAASR	0.366601	0.183301	0.183301	0.366601	16	8	8	16	0.500000	0.500000	1.000000	D	3	45
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_65.CARRGKBCAAAGTYCA	homer_26.YGGCCCCGCCCC	0.197019	0.147764	0.147764	0.197019	16	12	12	16	0.750000	0.750000	1.000000	R	3	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_65.CARRGKBCAAAGTYCA	homer_27.AVCAGGAAGT	0.317127	0.198204	0.198204	0.317127	16	10	10	16	0.625000	0.625000	1.000000	D	3	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_65.CARRGKBCAAAGTYCA	homer_28.RGKGGGCGGAGC	0.370000	0.277500	0.277500	0.370000	16	12	12	16	0.750000	0.750000	1.000000	D	1	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_65.CARRGKBCAAAGTYCA	homer_29.AWWWTGCTGAGTCAT	0.313037	0.293472	0.293472	0.313037	16	15	15	16	0.937500	0.937500	1.000000	D	1	59
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_65.CARRGKBCAAAGTYCA	homer_30.CAAAGGTCAG	0.785437	0.490898	0.490898	0.785437	16	10	10	16	0.625000	0.625000	1.000000	D	0	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_65.CARRGKBCAAAGTYCA	homer_31.VTGACTCATC	0.347843	0.217402	0.217402	0.347843	16	10	10	16	0.625000	0.625000	1.000000	R	0	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_65.CARRGKBCAAAGTYCA	homer_32.AAAGRGGAAGTG	0.320629	0.240471	0.240471	0.320629	16	12	12	16	0.750000	0.750000	1.000000	D	2	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_65.CARRGKBCAAAGTYCA	homer_33.GRAASTGAAAST	0.435543	0.326657	0.326657	0.435543	16	12	12	16	0.750000	0.750000	1.000000	D	1	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_65.CARRGKBCAAAGTYCA	homer_34.CCCCTCCCCCAC	0.257745	0.193309	0.193309	0.257745	16	12	12	16	0.750000	0.750000	1.000000	R	1	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_65.CARRGKBCAAAGTYCA	homer_35.GAAAGTGAAAGT	0.462963	0.347222	0.347222	0.462963	16	12	12	16	0.750000	0.750000	1.000000	D	1	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_65.CARRGKBCAAAGTYCA	homer_36.DATGASTCATHN	0.253517	0.190138	0.190138	0.253517	16	12	12	16	0.750000	0.750000	1.000000	D	0	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_65.CARRGKBCAAAGTYCA	homer_37.NDATGASTCAYN	0.247554	0.185665	0.185665	0.247554	16	12	12	16	0.750000	0.750000	1.000000	R	0	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_65.CARRGKBCAAAGTYCA	homer_38.RATGASTCAT	0.313039	0.195649	0.195649	0.313039	16	10	10	16	0.625000	0.625000	1.000000	D	0	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_65.CARRGKBCAAAGTYCA	homer_39.DATGASTCAT	0.326079	0.203799	0.203799	0.326079	16	10	10	16	0.625000	0.625000	1.000000	D	0	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_65.CARRGKBCAAAGTYCA	homer_40.AGTTTCAKTTTC	0.414316	0.310737	0.310737	0.414316	16	12	12	16	0.750000	0.750000	1.000000	R	1	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_65.CARRGKBCAAAGTYCA	homer_41.NNATGASTCATH	0.276079	0.178639	0.189804	0.253072	16	12	11	17	0.647059	0.687500	0.916667	D	-1	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_65.CARRGKBCAAAGTYCA	homer_42.SAAACCACAG	0.473855	0.296159	0.296159	0.473855	16	10	10	16	0.625000	0.625000	1.000000	D	2	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_65.CARRGKBCAAAGTYCA	homer_43.GAAASYGAAASY	0.452522	0.339392	0.339392	0.452522	16	12	12	16	0.750000	0.750000	1.000000	D	1	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_65.CARRGKBCAAAGTYCA	homer_44.AVCAGCTG	0.743897	0.148779	0.185974	0.371948	16	8	4	20	0.200000	0.250000	0.500000	D	12	45
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_65.CARRGKBCAAAGTYCA	homer_45.SGTCACGTGR	0.731883	0.174258	0.228714	0.365942	16	10	5	21	0.238095	0.312500	0.500000	D	11	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_65.CARRGKBCAAAGTYCA	homer_46.NATGASTCABNN	0.255981	0.191986	0.191986	0.255981	16	12	12	16	0.750000	0.750000	1.000000	D	0	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_65.CARRGKBCAAAGTYCA	homer_47.GATGASTCATCN	0.254373	0.190780	0.190780	0.254373	16	12	12	16	0.750000	0.750000	1.000000	D	0	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_65.CARRGKBCAAAGTYCA	homer_48.AGTTTCASTTTC	0.403193	0.302395	0.302395	0.403193	16	12	12	16	0.750000	0.750000	1.000000	R	1	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_65.CARRGKBCAAAGTYCA	homer_49.RCAGGATGTGGT	0.305794	0.169885	0.191121	0.254828	16	12	10	18	0.555556	0.625000	0.833333	R	6	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_65.CARRGKBCAAAGTYCA	homer_50.GGGGGAATCCCC	0.310385	0.232789	0.232789	0.310385	16	12	12	16	0.750000	0.750000	1.000000	D	3	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_65.CARRGKBCAAAGTYCA	homer_51.GCTGTGGTTW	0.458162	0.286351	0.286351	0.458162	16	10	10	16	0.625000	0.625000	1.000000	R	3	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_65.CARRGKBCAAAGTYCA	homer_52.GGATGACTCATC	0.234984	0.176238	0.176238	0.234984	16	12	12	16	0.750000	0.750000	1.000000	R	0	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_65.CARRGKBCAAAGTYCA	homer_53.NWAACCACADNN	0.459496	0.344622	0.344622	0.459496	16	12	12	16	0.750000	0.750000	1.000000	D	2	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_65.CARRGKBCAAAGTYCA	homer_54.ACCATCTGTT	0.348676	0.217923	0.217923	0.348676	16	10	10	16	0.625000	0.625000	1.000000	R	5	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_65.CARRGKBCAAAGTYCA	homer_55.SVYTTCCNGGAARB	0.103135	0.090243	0.090243	0.103135	16	14	14	16	0.875000	0.875000	1.000000	D	2	57
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_65.CARRGKBCAAAGTYCA	homer_56.SCCTAGCAACAG	0.305359	0.229019	0.229019	0.305359	16	12	12	16	0.750000	0.750000	1.000000	R	1	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_65.CARRGKBCAAAGTYCA	homer_57.AAACCACARM	0.393898	0.246187	0.246187	0.393898	16	10	10	16	0.625000	0.625000	1.000000	D	1	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_65.CARRGKBCAAAGTYCA	homer_58.RTTATGYAAB	0.275544	0.172215	0.172215	0.275544	16	10	10	16	0.625000	0.625000	1.000000	D	1	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_65.CARRGKBCAAAGTYCA	homer_59.NYTTCCWGGAAR	0.136936	0.102702	0.102702	0.136936	16	12	12	16	0.750000	0.750000	1.000000	D	3	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_65.CARRGKBCAAAGTYCA	homer_60.ASWTCCTGBT	0.203749	0.127343	0.127343	0.203749	16	10	10	16	0.625000	0.625000	1.000000	R	5	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_65.CARRGKBCAAAGTYCA	homer_61.DGGGYGKGGC	0.397941	0.146610	0.174099	0.278559	16	10	7	19	0.368421	0.437500	0.700000	D	-3	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_65.CARRGKBCAAAGTYCA	homer_62.TWGTCTGV	0.381763	0.190882	0.190882	0.381763	16	8	8	16	0.500000	0.500000	1.000000	R	6	45
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_65.CARRGKBCAAAGTYCA	homer_63.CTGGCAGSCTGCCA	0.424215	0.212107	0.265134	0.303010	16	14	10	20	0.500000	0.625000	0.714286	R	-4	57
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_65.CARRGKBCAAAGTYCA	homer_64.VGGGRATTYCCC	0.315063	0.203865	0.216606	0.288808	16	12	11	17	0.647059	0.687500	0.916667	R	5	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_65.CARRGKBCAAAGTYCA	homer_65.CARRGKBCAAAGTYCA	1.000000	1.000000	1.000000	1.000000	16	16	16	16	1.000000	1.000000	1.000000	D	0	61
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_65.CARRGKBCAAAGTYCA	homer_66.CCATTGTTNY	0.568884	0.355552	0.355552	0.568884	16	10	10	16	0.625000	0.625000	1.000000	R	3	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_65.CARRGKBCAAAGTYCA	homer_67.CYAAAAATAG	0.243964	0.152478	0.152478	0.243964	16	10	10	16	0.625000	0.625000	1.000000	D	2	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_65.CARRGKBCAAAGTYCA	homer_68.GGGGGGGG	0.517710	0.172570	0.194141	0.388282	16	8	6	18	0.333333	0.375000	0.750000	D	-2	45
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_65.CARRGKBCAAAGTYCA	homer_69.TTGAMCTTTG	0.914696	0.571685	0.571685	0.914696	16	10	10	16	0.625000	0.625000	1.000000	R	0	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_65.CARRGKBCAAAGTYCA	homer_70.MGGAAGTGAAAC	0.361296	0.270972	0.270972	0.361296	16	12	12	16	0.750000	0.750000	1.000000	D	0	53
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_65.CARRGKBCAAAGTYCA	homer_71.HACTTCCGGY	0.236860	0.148038	0.148038	0.236860	16	10	10	16	0.625000	0.625000	1.000000	R	4	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_65.CARRGKBCAAAGTYCA	homer_72.NRYTTCCGGY	0.329066	0.121235	0.143966	0.230346	16	10	7	19	0.368421	0.437500	0.700000	D	9	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_65.CARRGKBCAAAGTYCA	homer_73.AWWNTGCTGAGTCAT	0.295609	0.277134	0.277134	0.295609	16	15	15	16	0.937500	0.937500	1.000000	D	1	59
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_65.CARRGKBCAAAGTYCA	homer_74.AGGCCTAG	0.475889	0.237945	0.237945	0.475889	16	8	8	16	0.500000	0.500000	1.000000	R	1	45
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_65.CARRGKBCAAAGTYCA	homer_75.VTTACGTAAYNNNNN	0.184312	0.172792	0.172792	0.184312	16	15	15	16	0.937500	0.937500	1.000000	D	0	59
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_65.CARRGKBCAAAGTYCA	homer_76.TGCTGACTCA	0.245821	0.153638	0.153638	0.245821	16	10	10	16	0.625000	0.625000	1.000000	D	5	49
hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_65.CARRGKBCAAAGTYCA	homer_77.ATTGCGCAAC	0.439814	0.274884	0.274884	0.439814	16	10	10	16	0.625000	0.625000	1.000000	D	1	49
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_66.CCATTGTTNY	homer_1.ATTTCCTGTN	0.322017	0.263468	0.289815	0.289815	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_66.CCATTGTTNY	homer_2.ACCGGAAGTG	0.211643	0.211643	0.211643	0.211643	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_66.CCATTGTTNY	homer_3.AACCGGAAGT	0.203007	0.166097	0.182706	0.182706	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_66.CCATTGTTNY	homer_4.ACAGGAAGTG	0.264481	0.264481	0.264481	0.264481	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_66.CCATTGTTNY	homer_5.RACCGGAAGT	0.218987	0.179171	0.197088	0.197088	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_66.CCATTGTTNY	homer_6.AGAGGAAGTG	0.296733	0.296733	0.296733	0.296733	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_66.CCATTGTTNY	homer_7.NNAYTTCCTGHN	0.249095	0.207579	0.249095	0.207579	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_66.CCATTGTTNY	homer_8.NRYTTCCGGH	0.187695	0.187695	0.187695	0.187695	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_66.CCATTGTTNY	homer_9.MACAGGAAGT	0.267483	0.267483	0.267483	0.267483	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_66.CCATTGTTNY	homer_10.ACTTCCKGKT	0.251988	0.206172	0.226789	0.226789	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_66.CCATTGTTNY	homer_11.ACVAGGAAGT	0.221022	0.221022	0.221022	0.221022	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_66.CCATTGTTNY	homer_12.YCTTATCTBN	0.459856	0.376246	0.413870	0.413870	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_66.CCATTGTTNY	homer_13.NBWGATAAGR	0.458749	0.375340	0.412874	0.412874	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_66.CCATTGTTNY	homer_14.TGGCAGTTGG	0.290082	0.290082	0.290082	0.290082	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_66.CCATTGTTNY	homer_15.AVCCGGAAGT	0.199918	0.163569	0.179926	0.179926	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_66.CCATTGTTNY	homer_16.ANCAGGAAGT	0.282535	0.282535	0.282535	0.282535	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_66.CCATTGTTNY	homer_17.SAGATAAGRV	0.456349	0.456349	0.456349	0.456349	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_66.CCATTGTTNY	homer_18.TGCTGAGTCA	0.401628	0.172126	0.240977	0.240977	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_66.CCATTGTTNY	homer_19.GCTATTTTTAGC	0.498933	0.415777	0.498933	0.415777	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_66.CCATTGTTNY	homer_20.GGCVGTTR	0.650444	0.325222	0.390266	0.487833	10	8	6	12	0.500000	0.600000	0.750000	D	-2	33
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_66.CCATTGTTNY	homer_21.CYTGGCABNSTGCCAR	0.366590	0.162929	0.293272	0.183295	10	16	8	18	0.444444	0.800000	0.500000	D	2	49
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_66.CCATTGTTNY	homer_22.BBCTTATCTS	0.465769	0.465769	0.465769	0.465769	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_66.CCATTGTTNY	homer_23.VACAGGAAAT	0.297378	0.243309	0.267640	0.267640	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_66.CCATTGTTNY	homer_24.RGKGGGCGKGGC	0.859148	0.085915	0.171830	0.143191	10	12	2	20	0.100000	0.200000	0.166667	R	-10	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_66.CCATTGTTNY	homer_25.AGATAASR	0.458497	0.366797	0.366797	0.458497	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_66.CCATTGTTNY	homer_26.YGGCCCCGCCCC	0.242277	0.113062	0.169594	0.141328	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_66.CCATTGTTNY	homer_27.AVCAGGAAGT	0.287919	0.235570	0.259127	0.259127	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_66.CCATTGTTNY	homer_28.RGKGGGCGGAGC	0.229793	0.086172	0.137876	0.114896	10	12	6	16	0.375000	0.600000	0.500000	D	4	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_66.CCATTGTTNY	homer_29.AWWWTGCTGAGTCAT	0.367945	0.245297	0.367945	0.245297	10	15	10	15	0.666667	1.000000	0.666667	D	0	47
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_66.CCATTGTTNY	homer_30.CAAAGGTCAG	0.655318	0.280851	0.393191	0.393191	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_66.CCATTGTTNY	homer_31.VTGACTCATC	0.179078	0.179078	0.179078	0.179078	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_66.CCATTGTTNY	homer_32.AAAGRGGAAGTG	0.372336	0.310280	0.372336	0.310280	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_66.CCATTGTTNY	homer_33.GRAASTGAAAST	0.242239	0.201866	0.242239	0.201866	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_66.CCATTGTTNY	homer_34.CCCCTCCCCCAC	0.447539	0.131629	0.223769	0.186474	10	12	5	17	0.294118	0.500000	0.416667	R	5	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_66.CCATTGTTNY	homer_35.GAAAGTGAAAGT	0.308137	0.256780	0.308137	0.256780	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_66.CCATTGTTNY	homer_36.DATGASTCATHN	0.265535	0.183832	0.238982	0.199151	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_66.CCATTGTTNY	homer_37.NDATGASTCAYN	0.278149	0.192565	0.250334	0.208612	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_66.CCATTGTTNY	homer_38.RATGASTCAT	0.286003	0.190669	0.228803	0.228803	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_66.CCATTGTTNY	homer_39.DATGASTCAT	0.282454	0.188302	0.225963	0.225963	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_66.CCATTGTTNY	homer_40.AGTTTCAKTTTC	0.507829	0.236987	0.355480	0.296233	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_66.CCATTGTTNY	homer_41.NNATGASTCATH	0.248693	0.172172	0.223824	0.186520	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_66.CCATTGTTNY	homer_42.SAAACCACAG	0.465789	0.465789	0.465789	0.465789	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_66.CCATTGTTNY	homer_43.GAAASYGAAASY	0.280549	0.233791	0.280549	0.233791	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_66.CCATTGTTNY	homer_44.AVCAGCTG	0.353456	0.282764	0.282764	0.353456	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_66.CCATTGTTNY	homer_45.SGTCACGTGR	0.260054	0.212771	0.234049	0.234049	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_66.CCATTGTTNY	homer_46.NATGASTCABNN	0.279009	0.193160	0.251108	0.209256	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_66.CCATTGTTNY	homer_47.GATGASTCATCN	0.276030	0.191097	0.248427	0.207022	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_66.CCATTGTTNY	homer_48.AGTTTCASTTTC	0.276744	0.230620	0.276744	0.230620	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_66.CCATTGTTNY	homer_49.RCAGGATGTGGT	0.312163	0.216113	0.280946	0.234122	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_66.CCATTGTTNY	homer_50.GGGGGAATCCCC	0.203625	0.169688	0.203625	0.169688	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_66.CCATTGTTNY	homer_51.GCTGTGGTTW	0.483013	0.395193	0.434712	0.434712	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_66.CCATTGTTNY	homer_52.GGATGACTCATC	0.247076	0.171053	0.222369	0.185307	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_66.CCATTGTTNY	homer_53.NWAACCACADNN	0.611715	0.423495	0.550543	0.458786	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_66.CCATTGTTNY	homer_54.ACCATCTGTT	0.502508	0.335005	0.402006	0.402006	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_66.CCATTGTTNY	homer_55.SVYTTCCNGGAARB	0.307489	0.219635	0.307489	0.219635	10	14	10	14	0.714286	1.000000	0.714286	D	0	45
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_66.CCATTGTTNY	homer_56.SCCTAGCAACAG	0.419947	0.349956	0.419947	0.349956	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_66.CCATTGTTNY	homer_57.AAACCACARM	0.593852	0.395901	0.475081	0.475081	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_66.CCATTGTTNY	homer_58.RTTATGYAAB	0.537060	0.358040	0.429648	0.429648	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_66.CCATTGTTNY	homer_59.NYTTCCWGGAAR	0.314365	0.217638	0.282929	0.235774	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_66.CCATTGTTNY	homer_60.ASWTCCTGBT	0.225961	0.225961	0.225961	0.225961	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_66.CCATTGTTNY	homer_61.DGGGYGKGGC	0.160755	0.160755	0.160755	0.160755	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_66.CCATTGTTNY	homer_62.TWGTCTGV	0.494999	0.314999	0.346499	0.433124	10	8	7	11	0.636364	0.700000	0.875000	D	3	33
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_66.CCATTGTTNY	homer_63.CTGGCAGSCTGCCA	0.340419	0.140173	0.238294	0.170210	10	14	7	17	0.411765	0.700000	0.500000	D	3	45
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_66.CCATTGTTNY	homer_64.VGGGRATTYCCC	0.642822	0.101498	0.192847	0.160706	10	12	3	19	0.157895	0.300000	0.250000	R	-9	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_66.CCATTGTTNY	homer_65.CARRGKBCAAAGTYCA	0.568884	0.355552	0.568884	0.355552	10	16	10	16	0.625000	1.000000	0.625000	R	-3	49
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_66.CCATTGTTNY	homer_66.CCATTGTTNY	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_66.CCATTGTTNY	homer_67.CYAAAAATAG	0.499374	0.499374	0.499374	0.499374	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_66.CCATTGTTNY	homer_68.GGGGGGGG	0.918521	0.114815	0.183704	0.229630	10	8	2	16	0.125000	0.200000	0.250000	R	-6	33
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_66.CCATTGTTNY	homer_69.TTGAMCTTTG	0.491247	0.264518	0.343873	0.343873	10	10	7	13	0.538462	0.700000	0.700000	D	3	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_66.CCATTGTTNY	homer_70.MGGAAGTGAAAC	0.410512	0.234578	0.328410	0.273675	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_66.CCATTGTTNY	homer_71.HACTTCCGGY	0.230709	0.230709	0.230709	0.230709	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_66.CCATTGTTNY	homer_72.NRYTTCCGGY	0.194711	0.194711	0.194711	0.194711	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_66.CCATTGTTNY	homer_73.AWWNTGCTGAGTCAT	0.330214	0.220143	0.330214	0.220143	10	15	10	15	0.666667	1.000000	0.666667	D	0	47
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_66.CCATTGTTNY	homer_74.AGGCCTAG	0.267333	0.133666	0.160400	0.200499	10	8	6	12	0.500000	0.600000	0.750000	D	-2	33
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_66.CCATTGTTNY	homer_75.VTTACGTAAYNNNNN	0.478228	0.318818	0.478228	0.318818	10	15	10	15	0.666667	1.000000	0.666667	R	0	47
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_66.CCATTGTTNY	homer_76.TGCTGACTCA	0.205447	0.168093	0.184902	0.184902	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_66.CCATTGTTNY	homer_77.ATTGCGCAAC	0.593930	0.395954	0.475144	0.475144	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_67.CYAAAAATAG	homer_1.ATTTCCTGTN	0.582741	0.388494	0.466193	0.466193	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_67.CYAAAAATAG	homer_2.ACCGGAAGTG	0.391580	0.320384	0.352422	0.352422	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_67.CYAAAAATAG	homer_3.AACCGGAAGT	0.475329	0.316886	0.380263	0.380263	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_67.CYAAAAATAG	homer_4.ACAGGAAGTG	0.345263	0.282488	0.310736	0.310736	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_67.CYAAAAATAG	homer_5.RACCGGAAGT	0.459014	0.306009	0.367211	0.367211	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_67.CYAAAAATAG	homer_6.AGAGGAAGTG	0.232035	0.189846	0.208831	0.208831	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_67.CYAAAAATAG	homer_7.NNAYTTCCTGHN	0.353473	0.294561	0.353473	0.294561	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_67.CYAAAAATAG	homer_8.NRYTTCCGGH	0.361274	0.295588	0.325147	0.325147	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_67.CYAAAAATAG	homer_9.MACAGGAAGT	0.395778	0.263852	0.316622	0.316622	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_67.CYAAAAATAG	homer_10.ACTTCCKGKT	0.394515	0.263010	0.315612	0.315612	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_67.CYAAAAATAG	homer_11.ACVAGGAAGT	0.384674	0.256449	0.307739	0.307739	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_67.CYAAAAATAG	homer_12.YCTTATCTBN	0.493786	0.329191	0.395029	0.395029	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_67.CYAAAAATAG	homer_13.NBWGATAAGR	0.456227	0.304152	0.364982	0.364982	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_67.CYAAAAATAG	homer_14.TGGCAGTTGG	0.354049	0.190642	0.247834	0.247834	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_67.CYAAAAATAG	homer_15.AVCCGGAAGT	0.441675	0.294450	0.353340	0.353340	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_67.CYAAAAATAG	homer_16.ANCAGGAAGT	0.374297	0.249531	0.299437	0.299437	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_67.CYAAAAATAG	homer_17.SAGATAAGRV	0.284596	0.284596	0.284596	0.284596	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_67.CYAAAAATAG	homer_18.TGCTGAGTCA	0.202330	0.134887	0.161864	0.161864	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_67.CYAAAAATAG	homer_19.GCTATTTTTAGC	0.963155	0.802629	0.963155	0.802629	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_67.CYAAAAATAG	homer_20.GGCVGTTR	0.372200	0.186100	0.223320	0.279150	10	8	6	12	0.500000	0.600000	0.750000	R	4	33
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_67.CYAAAAATAG	homer_21.CYTGGCABNSTGCCAR	0.619275	0.147446	0.309637	0.193523	10	16	5	21	0.238095	0.500000	0.312500	R	-11	49
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_67.CYAAAAATAG	homer_22.BBCTTATCTS	0.280937	0.280937	0.280937	0.280937	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_67.CYAAAAATAG	homer_23.VACAGGAAAT	0.561103	0.374069	0.448882	0.448882	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_67.CYAAAAATAG	homer_24.RGKGGGCGKGGC	0.398090	0.117085	0.199045	0.165871	10	12	5	17	0.294118	0.500000	0.416667	R	-7	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_67.CYAAAAATAG	homer_25.AGATAASR	0.547546	0.273773	0.328528	0.410660	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_67.CYAAAAATAG	homer_26.YGGCCCCGCCCC	0.835045	0.131849	0.250514	0.208761	10	12	3	19	0.157895	0.300000	0.250000	R	-9	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_67.CYAAAAATAG	homer_27.AVCAGGAAGT	0.419805	0.279870	0.335844	0.335844	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_67.CYAAAAATAG	homer_28.RGKGGGCGGAGC	0.452499	0.133088	0.226249	0.188541	10	12	5	17	0.294118	0.500000	0.416667	R	-7	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_67.CYAAAAATAG	homer_29.AWWWTGCTGAGTCAT	0.274325	0.182883	0.274325	0.182883	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_67.CYAAAAATAG	homer_30.CAAAGGTCAG	0.186336	0.186336	0.186336	0.186336	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_67.CYAAAAATAG	homer_31.VTGACTCATC	0.256281	0.109835	0.153769	0.153769	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_67.CYAAAAATAG	homer_32.AAAGRGGAAGTG	0.695153	0.260682	0.417092	0.347576	10	12	6	16	0.375000	0.600000	0.500000	D	4	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_67.CYAAAAATAG	homer_33.GRAASTGAAAST	0.528529	0.302017	0.422823	0.352353	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_67.CYAAAAATAG	homer_34.CCCCTCCCCCAC	0.572050	0.127122	0.228820	0.190683	10	12	4	18	0.222222	0.400000	0.333333	D	-8	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_67.CYAAAAATAG	homer_35.GAAAGTGAAAGT	0.512019	0.292582	0.409615	0.341346	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_67.CYAAAAATAG	homer_36.DATGASTCATHN	0.244872	0.114273	0.171410	0.142842	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_67.CYAAAAATAG	homer_37.NDATGASTCAYN	0.175806	0.146505	0.175806	0.146505	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_67.CYAAAAATAG	homer_38.RATGASTCAT	0.330741	0.110247	0.165370	0.165370	10	10	5	15	0.333333	0.500000	0.500000	D	-5	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_67.CYAAAAATAG	homer_39.DATGASTCAT	0.305023	0.130724	0.183014	0.183014	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_67.CYAAAAATAG	homer_40.AGTTTCAKTTTC	0.553790	0.316451	0.443032	0.369193	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_67.CYAAAAATAG	homer_41.NNATGASTCATH	0.307341	0.143426	0.215139	0.179282	10	12	7	15	0.466667	0.700000	0.583333	D	3	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_67.CYAAAAATAG	homer_42.SAAACCACAG	0.276397	0.276397	0.276397	0.276397	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_67.CYAAAAATAG	homer_43.GAAASYGAAASY	0.516389	0.295080	0.413111	0.344260	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_67.CYAAAAATAG	homer_44.AVCAGCTG	0.316209	0.121619	0.158104	0.197631	10	8	5	13	0.384615	0.500000	0.625000	D	5	33
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_67.CYAAAAATAG	homer_45.SGTCACGTGR	0.087520	0.087520	0.087520	0.087520	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_67.CYAAAAATAG	homer_46.NATGASTCABNN	0.218610	0.102018	0.153027	0.127522	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_67.CYAAAAATAG	homer_47.GATGASTCATCN	0.211796	0.098838	0.148257	0.123548	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_67.CYAAAAATAG	homer_48.AGTTTCASTTTC	0.543763	0.310722	0.435011	0.362509	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_67.CYAAAAATAG	homer_49.RCAGGATGTGGT	0.278702	0.232252	0.278702	0.232252	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_67.CYAAAAATAG	homer_50.GGGGGAATCCCC	0.654474	0.103338	0.196342	0.163619	10	12	3	19	0.157895	0.300000	0.250000	R	-9	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_67.CYAAAAATAG	homer_51.GCTGTGGTTW	0.310719	0.254224	0.279647	0.279647	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_67.CYAAAAATAG	homer_52.GGATGACTCATC	0.286112	0.107292	0.171667	0.143056	10	12	6	16	0.375000	0.600000	0.500000	R	4	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_67.CYAAAAATAG	homer_53.NWAACCACADNN	0.419745	0.239854	0.335796	0.279830	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_67.CYAAAAATAG	homer_54.ACCATCTGTT	0.341730	0.279597	0.307557	0.307557	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_67.CYAAAAATAG	homer_55.SVYTTCCNGGAARB	0.432579	0.308985	0.432579	0.308985	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_67.CYAAAAATAG	homer_56.SCCTAGCAACAG	0.386776	0.322313	0.386776	0.322313	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_67.CYAAAAATAG	homer_57.AAACCACARM	0.494822	0.266443	0.346375	0.346375	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_67.CYAAAAATAG	homer_58.RTTATGYAAB	0.303031	0.247935	0.272728	0.272728	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_67.CYAAAAATAG	homer_59.NYTTCCWGGAAR	0.448354	0.310399	0.403519	0.336266	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_67.CYAAAAATAG	homer_60.ASWTCCTGBT	0.351247	0.234165	0.280997	0.280997	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_67.CYAAAAATAG	homer_61.DGGGYGKGGC	0.840211	0.148272	0.252063	0.252063	10	10	3	17	0.176471	0.300000	0.300000	R	-7	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_67.CYAAAAATAG	homer_62.TWGTCTGV	0.641318	0.183234	0.256527	0.320659	10	8	4	14	0.285714	0.400000	0.500000	D	-4	33
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_67.CYAAAAATAG	homer_63.CTGGCAGSCTGCCA	0.672002	0.134400	0.268801	0.192000	10	14	4	20	0.200000	0.400000	0.285714	R	-10	45
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_67.CYAAAAATAG	homer_64.VGGGRATTYCCC	0.773012	0.122055	0.231904	0.193253	10	12	3	19	0.157895	0.300000	0.250000	R	-9	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_67.CYAAAAATAG	homer_65.CARRGKBCAAAGTYCA	0.243964	0.152478	0.243964	0.152478	10	16	10	16	0.625000	1.000000	0.625000	D	-2	49
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_67.CYAAAAATAG	homer_66.CCATTGTTNY	0.499374	0.499374	0.499374	0.499374	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_67.CYAAAAATAG	homer_67.CYAAAAATAG	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_67.CYAAAAATAG	homer_68.GGGGGGGG	0.784389	0.098049	0.156878	0.196097	10	8	2	16	0.125000	0.200000	0.250000	R	-6	33
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_67.CYAAAAATAG	homer_69.TTGAMCTTTG	0.605385	0.201795	0.302693	0.302693	10	10	5	15	0.333333	0.500000	0.500000	D	-5	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_67.CYAAAAATAG	homer_70.MGGAAGTGAAAC	0.426496	0.243712	0.341197	0.284331	10	12	8	14	0.571429	0.800000	0.666667	D	2	41
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_67.CYAAAAATAG	homer_71.HACTTCCGGY	0.416048	0.340403	0.374443	0.374443	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_67.CYAAAAATAG	homer_72.NRYTTCCGGY	0.438759	0.358985	0.394883	0.394883	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_67.CYAAAAATAG	homer_73.AWWNTGCTGAGTCAT	0.243390	0.162260	0.243390	0.162260	10	15	10	15	0.666667	1.000000	0.666667	R	-4	47
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_67.CYAAAAATAG	homer_74.AGGCCTAG	0.703100	0.200886	0.281240	0.351550	10	8	4	14	0.285714	0.400000	0.500000	D	-4	33
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_67.CYAAAAATAG	homer_75.VTTACGTAAYNNNNN	0.258844	0.172563	0.258844	0.172563	10	15	10	15	0.666667	1.000000	0.666667	D	-3	47
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_67.CYAAAAATAG	homer_76.TGCTGACTCA	0.710786	0.177696	0.284314	0.284314	10	10	4	16	0.250000	0.400000	0.400000	D	-6	37
hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_67.CYAAAAATAG	homer_77.ATTGCGCAAC	0.382894	0.255263	0.306316	0.306316	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_68.GGGGGGGG	homer_1.ATTTCCTGTN	0.425097	0.212549	0.318823	0.255058	8	10	6	12	0.500000	0.750000	0.600000	R	2	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_68.GGGGGGGG	homer_2.ACCGGAAGTG	0.512517	0.326147	0.448453	0.358762	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_68.GGGGGGGG	homer_3.AACCGGAAGT	0.470980	0.235490	0.353235	0.282588	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_68.GGGGGGGG	homer_4.ACAGGAAGTG	0.507584	0.323008	0.444136	0.355309	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_68.GGGGGGGG	homer_5.RACCGGAAGT	0.496637	0.248318	0.372478	0.297982	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_68.GGGGGGGG	homer_6.AGAGGAAGTG	0.503911	0.320671	0.440922	0.352738	8	10	7	11	0.636364	0.875000	0.700000	D	-3	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_68.GGGGGGGG	homer_7.NNAYTTCCTGHN	0.416640	0.277760	0.416640	0.277760	8	12	8	12	0.666667	1.000000	0.666667	R	-4	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_68.GGGGGGGG	homer_8.NRYTTCCGGH	0.452059	0.287674	0.395551	0.316441	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_68.GGGGGGGG	homer_9.MACAGGAAGT	0.467922	0.233961	0.350941	0.280753	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_68.GGGGGGGG	homer_10.ACTTCCKGKT	0.538713	0.269357	0.404035	0.323228	8	10	6	12	0.500000	0.750000	0.600000	R	2	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_68.GGGGGGGG	homer_11.ACVAGGAAGT	0.453944	0.226972	0.340458	0.272366	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_68.GGGGGGGG	homer_12.YCTTATCTBN	0.180672	0.114973	0.158088	0.126470	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_68.GGGGGGGG	homer_13.NBWGATAAGR	0.408460	0.116703	0.204230	0.163384	8	10	4	14	0.285714	0.500000	0.400000	D	4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_68.GGGGGGGG	homer_14.TGGCAGTTGG	0.265693	0.212554	0.265693	0.212554	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_68.GGGGGGGG	homer_15.AVCCGGAAGT	0.491557	0.245778	0.368668	0.294934	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_68.GGGGGGGG	homer_16.ANCAGGAAGT	0.454850	0.227425	0.341138	0.272910	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_68.GGGGGGGG	homer_17.SAGATAAGRV	0.776574	0.155315	0.291215	0.232972	8	10	3	15	0.200000	0.375000	0.300000	D	-7	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_68.GGGGGGGG	homer_18.TGCTGAGTCA	0.187984	0.119626	0.164486	0.131589	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_68.GGGGGGGG	homer_19.GCTATTTTTAGC	0.402869	0.071095	0.151076	0.100717	8	12	3	17	0.176471	0.375000	0.250000	D	-9	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_68.GGGGGGGG	homer_20.GGCVGTTR	0.291010	0.291010	0.291010	0.291010	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_68.GGGGGGGG	homer_21.CYTGGCABNSTGCCAR	0.415900	0.207950	0.415900	0.207950	8	16	8	16	0.500000	1.000000	0.500000	R	-2	45
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_68.GGGGGGGG	homer_22.BBCTTATCTS	0.741695	0.148339	0.278136	0.222509	8	10	3	15	0.200000	0.375000	0.300000	R	-7	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_68.GGGGGGGG	homer_23.VACAGGAAAT	0.364709	0.182355	0.273532	0.218826	8	10	6	12	0.500000	0.750000	0.600000	D	2	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_68.GGGGGGGG	homer_24.RGKGGGCGKGGC	0.824002	0.549334	0.824002	0.549334	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_68.GGGGGGGG	homer_25.AGATAASR	0.111691	0.086871	0.097729	0.097729	8	8	7	9	0.777778	0.875000	0.875000	D	-1	29
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_68.GGGGGGGG	homer_26.YGGCCCCGCCCC	0.844331	0.562887	0.844331	0.562887	8	12	8	12	0.666667	1.000000	0.666667	R	-1	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_68.GGGGGGGG	homer_27.AVCAGGAAGT	0.503218	0.251609	0.377413	0.301931	8	10	6	12	0.500000	0.750000	0.600000	D	2	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_68.GGGGGGGG	homer_28.RGKGGGCGGAGC	0.797121	0.531414	0.797121	0.531414	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_68.GGGGGGGG	homer_29.AWWWTGCTGAGTCAT	0.140187	0.074767	0.140187	0.074767	8	15	8	15	0.533333	1.000000	0.533333	D	-4	43
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_68.GGGGGGGG	homer_30.CAAAGGTCAG	0.408313	0.204157	0.306235	0.244988	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_68.GGGGGGGG	homer_31.VTGACTCATC	0.218295	0.109147	0.163721	0.130977	8	10	6	12	0.500000	0.750000	0.600000	R	2	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_68.GGGGGGGG	homer_32.AAAGRGGAAGTG	0.483272	0.260223	0.422863	0.281909	8	12	7	13	0.538462	0.875000	0.583333	D	1	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_68.GGGGGGGG	homer_33.GRAASTGAAAST	0.296867	0.197912	0.296867	0.197912	8	12	8	12	0.666667	1.000000	0.666667	D	0	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_68.GGGGGGGG	homer_34.CCCCTCCCCCAC	0.903592	0.602395	0.903592	0.602395	8	12	8	12	0.666667	1.000000	0.666667	R	-4	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_68.GGGGGGGG	homer_35.GAAAGTGAAAGT	0.282330	0.152024	0.247038	0.164692	8	12	7	13	0.538462	0.875000	0.583333	D	1	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_68.GGGGGGGG	homer_36.DATGASTCATHN	0.278373	0.092791	0.173983	0.115989	8	12	5	15	0.333333	0.625000	0.416667	R	3	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_68.GGGGGGGG	homer_37.NDATGASTCAYN	0.716259	0.079584	0.179065	0.119377	8	12	2	18	0.111111	0.250000	0.166667	D	6	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_68.GGGGGGGG	homer_38.RATGASTCAT	0.271052	0.077444	0.135526	0.108421	8	10	4	14	0.285714	0.500000	0.400000	D	4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_68.GGGGGGGG	homer_39.DATGASTCAT	0.135535	0.067768	0.101651	0.081321	8	10	6	12	0.500000	0.750000	0.600000	D	2	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_68.GGGGGGGG	homer_40.AGTTTCAKTTTC	0.252504	0.135963	0.220941	0.147294	8	12	7	13	0.538462	0.875000	0.583333	R	1	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_68.GGGGGGGG	homer_41.NNATGASTCATH	0.634332	0.070481	0.158583	0.105722	8	12	2	18	0.111111	0.250000	0.166667	D	6	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_68.GGGGGGGG	homer_42.SAAACCACAG	0.458636	0.229318	0.343977	0.275181	8	10	6	12	0.500000	0.750000	0.600000	R	2	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_68.GGGGGGGG	homer_43.GAAASYGAAASY	0.203156	0.109392	0.177761	0.118508	8	12	7	13	0.538462	0.875000	0.583333	D	1	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_68.GGGGGGGG	homer_44.AVCAGCTG	0.169343	0.131711	0.148175	0.148175	8	8	7	9	0.777778	0.875000	0.875000	R	-1	29
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_68.GGGGGGGG	homer_45.SGTCACGTGR	0.334239	0.167119	0.250679	0.200543	8	10	6	12	0.500000	0.750000	0.600000	R	-4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_68.GGGGGGGG	homer_46.NATGASTCABNN	0.760029	0.084448	0.190007	0.126672	8	12	2	18	0.111111	0.250000	0.166667	R	6	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_68.GGGGGGGG	homer_47.GATGASTCATCN	0.316058	0.105353	0.197536	0.131691	8	12	5	15	0.333333	0.625000	0.416667	R	3	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_68.GGGGGGGG	homer_48.AGTTTCASTTTC	0.255425	0.137536	0.223497	0.148998	8	12	7	13	0.538462	0.875000	0.583333	R	1	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_68.GGGGGGGG	homer_49.RCAGGATGTGGT	0.615927	0.410618	0.615927	0.410618	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_68.GGGGGGGG	homer_50.GGGGGAATCCCC	0.499666	0.333111	0.499666	0.333111	8	12	8	12	0.666667	1.000000	0.666667	D	0	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_68.GGGGGGGG	homer_51.GCTGTGGTTW	0.439798	0.279872	0.384823	0.307859	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_68.GGGGGGGG	homer_52.GGATGACTCATC	0.342895	0.114298	0.214310	0.142873	8	12	5	15	0.333333	0.625000	0.416667	D	3	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_68.GGGGGGGG	homer_53.NWAACCACADNN	0.381038	0.254025	0.381038	0.254025	8	12	8	12	0.666667	1.000000	0.666667	R	0	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_68.GGGGGGGG	homer_54.ACCATCTGTT	0.262808	0.167241	0.229957	0.183965	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_68.GGGGGGGG	homer_55.SVYTTCCNGGAARB	0.409527	0.191112	0.358336	0.204763	8	14	7	15	0.466667	0.875000	0.500000	R	-7	41
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_68.GGGGGGGG	homer_56.SCCTAGCAACAG	0.296664	0.159742	0.259581	0.173054	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_68.GGGGGGGG	homer_57.AAACCACARM	0.461548	0.293712	0.403855	0.323084	8	10	7	11	0.636364	0.875000	0.700000	R	1	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_68.GGGGGGGG	homer_58.RTTATGYAAB	0.730297	0.042959	0.091287	0.073030	8	10	1	17	0.058824	0.125000	0.100000	D	7	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_68.GGGGGGGG	homer_59.NYTTCCWGGAAR	0.411839	0.176503	0.308880	0.205920	8	12	6	14	0.428571	0.750000	0.500000	R	-6	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_68.GGGGGGGG	homer_60.ASWTCCTGBT	0.402034	0.201017	0.301525	0.241220	8	10	6	12	0.500000	0.750000	0.600000	R	-4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_68.GGGGGGGG	homer_61.DGGGYGKGGC	0.824826	0.659861	0.824826	0.659861	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_68.GGGGGGGG	homer_62.TWGTCTGV	0.321688	0.193013	0.241266	0.241266	8	8	6	10	0.600000	0.750000	0.750000	D	-2	29
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_68.GGGGGGGG	homer_63.CTGGCAGSCTGCCA	0.352539	0.201451	0.352539	0.201451	8	14	8	14	0.571429	1.000000	0.571429	D	-2	41
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_68.GGGGGGGG	homer_64.VGGGRATTYCCC	0.812446	0.270815	0.507779	0.338519	8	12	5	15	0.333333	0.625000	0.416667	D	3	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_68.GGGGGGGG	homer_65.CARRGKBCAAAGTYCA	0.517710	0.172570	0.388282	0.194141	8	16	6	18	0.333333	0.750000	0.375000	D	2	45
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_68.GGGGGGGG	homer_66.CCATTGTTNY	0.918521	0.114815	0.229630	0.183704	8	10	2	16	0.125000	0.250000	0.200000	R	-8	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_68.GGGGGGGG	homer_67.CYAAAAATAG	0.784389	0.098049	0.196097	0.156878	8	10	2	16	0.125000	0.250000	0.200000	R	-8	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_68.GGGGGGGG	homer_68.GGGGGGGG	1.000000	1.000000	1.000000	1.000000	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_68.GGGGGGGG	homer_69.TTGAMCTTTG	0.456963	0.228481	0.342722	0.274178	8	10	6	12	0.500000	0.750000	0.600000	R	2	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_68.GGGGGGGG	homer_70.MGGAAGTGAAAC	0.371333	0.247555	0.371333	0.247555	8	12	8	12	0.666667	1.000000	0.666667	D	-1	37
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_68.GGGGGGGG	homer_71.HACTTCCGGY	0.465213	0.296045	0.407062	0.325649	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_68.GGGGGGGG	homer_72.NRYTTCCGGY	0.405435	0.258004	0.354756	0.283805	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_68.GGGGGGGG	homer_73.AWWNTGCTGAGTCAT	0.173481	0.092523	0.173481	0.092523	8	15	8	15	0.533333	1.000000	0.533333	D	-3	43
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_68.GGGGGGGG	homer_74.AGGCCTAG	0.369302	0.287235	0.323140	0.323140	8	8	7	9	0.777778	0.875000	0.875000	D	-1	29
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_68.GGGGGGGG	homer_75.VTTACGTAAYNNNNN	0.262011	0.092475	0.196508	0.104805	8	15	6	17	0.352941	0.750000	0.400000	R	2	43
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_68.GGGGGGGG	homer_76.TGCTGACTCA	0.349787	0.099939	0.174894	0.139915	8	10	4	14	0.285714	0.500000	0.400000	R	4	33
hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_68.GGGGGGGG	homer_77.ATTGCGCAAC	0.165713	0.082857	0.124285	0.099428	8	10	6	12	0.500000	0.750000	0.600000	R	2	33
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_69.TTGAMCTTTG	homer_1.ATTTCCTGTN	0.359971	0.359971	0.359971	0.359971	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_69.TTGAMCTTTG	homer_2.ACCGGAAGTG	0.286468	0.190979	0.229174	0.229174	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_69.TTGAMCTTTG	homer_3.AACCGGAAGT	0.524321	0.224709	0.314593	0.314593	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_69.TTGAMCTTTG	homer_4.ACAGGAAGTG	0.392286	0.211231	0.274600	0.274600	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_69.TTGAMCTTTG	homer_5.RACCGGAAGT	0.483998	0.207428	0.290399	0.290399	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_69.TTGAMCTTTG	homer_6.AGAGGAAGTG	0.411789	0.221732	0.288252	0.288252	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_69.TTGAMCTTTG	homer_7.NNAYTTCCTGHN	0.279152	0.232627	0.279152	0.232627	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_69.TTGAMCTTTG	homer_8.NRYTTCCGGH	0.252717	0.206768	0.227445	0.227445	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_69.TTGAMCTTTG	homer_9.MACAGGAAGT	0.252579	0.252579	0.252579	0.252579	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_69.TTGAMCTTTG	homer_10.ACTTCCKGKT	0.498035	0.213443	0.298821	0.298821	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_69.TTGAMCTTTG	homer_11.ACVAGGAAGT	0.543504	0.232930	0.326102	0.326102	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_69.TTGAMCTTTG	homer_12.YCTTATCTBN	0.433365	0.354571	0.390028	0.390028	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_69.TTGAMCTTTG	homer_13.NBWGATAAGR	0.418665	0.342544	0.376799	0.376799	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_69.TTGAMCTTTG	homer_14.TGGCAGTTGG	0.384527	0.314613	0.346074	0.346074	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_69.TTGAMCTTTG	homer_15.AVCCGGAAGT	0.490956	0.210410	0.294573	0.294573	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_69.TTGAMCTTTG	homer_16.ANCAGGAAGT	0.216788	0.216788	0.216788	0.216788	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_69.TTGAMCTTTG	homer_17.SAGATAAGRV	0.429018	0.286012	0.343214	0.343214	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_69.TTGAMCTTTG	homer_18.TGCTGAGTCA	0.390608	0.319589	0.351547	0.351547	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_69.TTGAMCTTTG	homer_19.GCTATTTTTAGC	0.517390	0.152174	0.258695	0.215579	10	12	5	17	0.294118	0.500000	0.416667	D	-7	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_69.TTGAMCTTTG	homer_20.GGCVGTTR	0.369740	0.295792	0.295792	0.369740	10	8	8	10	0.800000	0.800000	1.000000	D	2	33
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_69.TTGAMCTTTG	homer_21.CYTGGCABNSTGCCAR	0.490513	0.306570	0.490513	0.306570	10	16	10	16	0.625000	1.000000	0.625000	D	-1	49
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_69.TTGAMCTTTG	homer_22.BBCTTATCTS	0.444843	0.296562	0.355874	0.355874	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_69.TTGAMCTTTG	homer_23.VACAGGAAAT	0.288783	0.288783	0.288783	0.288783	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_69.TTGAMCTTTG	homer_24.RGKGGGCGKGGC	0.229194	0.158673	0.206275	0.171895	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_69.TTGAMCTTTG	homer_25.AGATAASR	0.469439	0.298734	0.328608	0.410759	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_69.TTGAMCTTTG	homer_26.YGGCCCCGCCCC	0.226993	0.189161	0.226993	0.189161	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_69.TTGAMCTTTG	homer_27.AVCAGGAAGT	0.208476	0.208476	0.208476	0.208476	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_69.TTGAMCTTTG	homer_28.RGKGGGCGGAGC	0.245467	0.169939	0.220920	0.184100	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_69.TTGAMCTTTG	homer_29.AWWWTGCTGAGTCAT	0.387341	0.258227	0.387341	0.258227	10	15	10	15	0.666667	1.000000	0.666667	R	0	47
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_69.TTGAMCTTTG	homer_30.CAAAGGTCAG	0.907080	0.907080	0.907080	0.907080	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_69.TTGAMCTTTG	homer_31.VTGACTCATC	0.407271	0.407271	0.407271	0.407271	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_69.TTGAMCTTTG	homer_32.AAAGRGGAAGTG	0.380697	0.263560	0.342628	0.285523	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_69.TTGAMCTTTG	homer_33.GRAASTGAAAST	0.327575	0.272979	0.327575	0.272979	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_69.TTGAMCTTTG	homer_34.CCCCTCCCCCAC	0.461489	0.173058	0.276894	0.230745	10	12	6	16	0.375000	0.600000	0.500000	D	4	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_69.TTGAMCTTTG	homer_35.GAAAGTGAAAGT	0.410420	0.342017	0.410420	0.342017	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_69.TTGAMCTTTG	homer_36.DATGASTCATHN	0.371346	0.309455	0.371346	0.309455	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_69.TTGAMCTTTG	homer_37.NDATGASTCAYN	0.375271	0.312726	0.375271	0.312726	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_69.TTGAMCTTTG	homer_38.RATGASTCAT	0.358101	0.358101	0.358101	0.358101	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_69.TTGAMCTTTG	homer_39.DATGASTCAT	0.373224	0.373224	0.373224	0.373224	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_69.TTGAMCTTTG	homer_40.AGTTTCAKTTTC	0.349968	0.291640	0.349968	0.291640	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_69.TTGAMCTTTG	homer_41.NNATGASTCATH	0.359717	0.299764	0.359717	0.299764	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_69.TTGAMCTTTG	homer_42.SAAACCACAG	0.372224	0.372224	0.372224	0.372224	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_69.TTGAMCTTTG	homer_43.GAAASYGAAASY	0.398155	0.331796	0.398155	0.331796	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_69.TTGAMCTTTG	homer_44.AVCAGCTG	0.527918	0.203045	0.263959	0.329949	10	8	5	13	0.384615	0.500000	0.625000	R	-3	33
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_69.TTGAMCTTTG	homer_45.SGTCACGTGR	0.671562	0.287812	0.402937	0.402937	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_69.TTGAMCTTTG	homer_46.NATGASTCABNN	0.371190	0.309325	0.371190	0.309325	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_69.TTGAMCTTTG	homer_47.GATGASTCATCN	0.382740	0.318950	0.382740	0.318950	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_69.TTGAMCTTTG	homer_48.AGTTTCASTTTC	0.360315	0.300263	0.360315	0.300263	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_69.TTGAMCTTTG	homer_49.RCAGGATGTGGT	0.340108	0.158717	0.238076	0.198396	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_69.TTGAMCTTTG	homer_50.GGGGGAATCCCC	0.372587	0.173874	0.260811	0.217342	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_69.TTGAMCTTTG	homer_51.GCTGTGGTTW	0.347944	0.284682	0.313150	0.313150	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_69.TTGAMCTTTG	homer_52.GGATGACTCATC	0.398294	0.331912	0.398294	0.331912	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_69.TTGAMCTTTG	homer_53.NWAACCACADNN	0.325559	0.271299	0.325559	0.271299	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_69.TTGAMCTTTG	homer_54.ACCATCTGTT	0.184352	0.184352	0.184352	0.184352	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_69.TTGAMCTTTG	homer_55.SVYTTCCNGGAARB	0.308952	0.154476	0.247161	0.176544	10	14	8	16	0.500000	0.800000	0.571429	R	-6	45
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_69.TTGAMCTTTG	homer_56.SCCTAGCAACAG	0.533574	0.200090	0.320144	0.266787	10	12	6	16	0.375000	0.600000	0.500000	D	4	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_69.TTGAMCTTTG	homer_57.AAACCACARM	0.368807	0.301751	0.331926	0.331926	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_69.TTGAMCTTTG	homer_58.RTTATGYAAB	0.201263	0.201263	0.201263	0.201263	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_69.TTGAMCTTTG	homer_59.NYTTCCWGGAAR	0.337901	0.157687	0.236530	0.197109	10	12	7	15	0.466667	0.700000	0.583333	R	-5	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_69.TTGAMCTTTG	homer_60.ASWTCCTGBT	0.371944	0.200278	0.260361	0.260361	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_69.TTGAMCTTTG	homer_61.DGGGYGKGGC	0.247428	0.164952	0.197942	0.197942	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_69.TTGAMCTTTG	homer_62.TWGTCTGV	0.258444	0.206755	0.206755	0.258444	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_69.TTGAMCTTTG	homer_63.CTGGCAGSCTGCCA	0.338796	0.241997	0.338796	0.241997	10	14	10	14	0.714286	1.000000	0.714286	D	0	45
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_69.TTGAMCTTTG	homer_64.VGGGRATTYCCC	0.393317	0.183548	0.275322	0.229435	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_69.TTGAMCTTTG	homer_65.CARRGKBCAAAGTYCA	0.914696	0.571685	0.914696	0.571685	10	16	10	16	0.625000	1.000000	0.625000	R	-6	49
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_69.TTGAMCTTTG	homer_66.CCATTGTTNY	0.491247	0.264518	0.343873	0.343873	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_69.TTGAMCTTTG	homer_67.CYAAAAATAG	0.605385	0.201795	0.302693	0.302693	10	10	5	15	0.333333	0.500000	0.500000	D	5	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_69.TTGAMCTTTG	homer_68.GGGGGGGG	0.456963	0.228481	0.274178	0.342722	10	8	6	12	0.500000	0.600000	0.750000	R	4	33
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_69.TTGAMCTTTG	homer_69.TTGAMCTTTG	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_69.TTGAMCTTTG	homer_70.MGGAAGTGAAAC	0.345816	0.288180	0.345816	0.288180	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_69.TTGAMCTTTG	homer_71.HACTTCCGGY	0.317459	0.211640	0.253967	0.253967	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_69.TTGAMCTTTG	homer_72.NRYTTCCGGY	0.320188	0.213459	0.256150	0.256150	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_69.TTGAMCTTTG	homer_73.AWWNTGCTGAGTCAT	0.345177	0.230118	0.345177	0.230118	10	15	10	15	0.666667	1.000000	0.666667	R	0	47
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_69.TTGAMCTTTG	homer_74.AGGCCTAG	0.504100	0.403280	0.403280	0.504100	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_69.TTGAMCTTTG	homer_75.VTTACGTAAYNNNNN	0.283241	0.188827	0.283241	0.188827	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_69.TTGAMCTTTG	homer_76.TGCTGACTCA	0.512106	0.341404	0.409685	0.409685	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_69.TTGAMCTTTG	homer_77.ATTGCGCAAC	0.373739	0.305786	0.336365	0.336365	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_70.MGGAAGTGAAAC	homer_1.ATTTCCTGTN	0.823713	0.384400	0.480499	0.576599	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_70.MGGAAGTGAAAC	homer_2.ACCGGAAGTG	0.867150	0.495514	0.578100	0.693720	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_70.MGGAAGTGAAAC	homer_3.AACCGGAAGT	0.930180	0.434084	0.542605	0.651126	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_70.MGGAAGTGAAAC	homer_4.ACAGGAAGTG	0.916786	0.523878	0.611191	0.733429	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_70.MGGAAGTGAAAC	homer_5.RACCGGAAGT	0.946836	0.441857	0.552321	0.662785	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_70.MGGAAGTGAAAC	homer_6.AGAGGAAGTG	0.913552	0.522029	0.609034	0.730841	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_70.MGGAAGTGAAAC	homer_7.NNAYTTCCTGHN	0.764838	0.458903	0.573629	0.573629	12	12	9	15	0.600000	0.750000	0.750000	R	-3	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_70.MGGAAGTGAAAC	homer_8.NRYTTCCGGH	0.815875	0.466214	0.543917	0.652700	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_70.MGGAAGTGAAAC	homer_9.MACAGGAAGT	0.874208	0.407964	0.509955	0.611946	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_70.MGGAAGTGAAAC	homer_10.ACTTCCKGKT	0.957852	0.446998	0.558747	0.670497	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_70.MGGAAGTGAAAC	homer_11.ACVAGGAAGT	0.953255	0.444852	0.556065	0.667278	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_70.MGGAAGTGAAAC	homer_12.YCTTATCTBN	0.398703	0.276025	0.299028	0.358833	12	10	9	13	0.692308	0.750000	0.900000	R	-1	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_70.MGGAAGTGAAAC	homer_13.NBWGATAAGR	0.365107	0.252766	0.273830	0.328596	12	10	9	13	0.692308	0.750000	0.900000	D	-1	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_70.MGGAAGTGAAAC	homer_14.TGGCAGTTGG	0.432639	0.360533	0.360533	0.432639	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_70.MGGAAGTGAAAC	homer_15.AVCCGGAAGT	0.918826	0.428785	0.535982	0.643178	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_70.MGGAAGTGAAAC	homer_16.ANCAGGAAGT	0.915821	0.427383	0.534229	0.641075	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_70.MGGAAGTGAAAC	homer_17.SAGATAAGRV	0.377669	0.314724	0.314724	0.377669	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_70.MGGAAGTGAAAC	homer_18.TGCTGAGTCA	0.583961	0.218985	0.291980	0.350377	12	10	6	16	0.375000	0.500000	0.600000	R	6	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_70.MGGAAGTGAAAC	homer_19.GCTATTTTTAGC	0.283175	0.202268	0.235979	0.235979	12	12	10	14	0.714286	0.833333	0.833333	R	-2	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_70.MGGAAGTGAAAC	homer_20.GGCVGTTR	0.409156	0.272770	0.272770	0.409156	12	8	8	12	0.666667	0.666667	1.000000	R	2	37
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_70.MGGAAGTGAAAC	homer_21.CYTGGCABNSTGCCAR	0.255647	0.191736	0.255647	0.191736	12	16	12	16	0.750000	1.000000	0.750000	D	-2	53
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_70.MGGAAGTGAAAC	homer_22.BBCTTATCTS	0.378258	0.315215	0.315215	0.378258	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_70.MGGAAGTGAAAC	homer_23.VACAGGAAAT	0.877943	0.409707	0.512133	0.614560	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_70.MGGAAGTGAAAC	homer_24.RGKGGGCGKGGC	0.356066	0.254333	0.296722	0.296722	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_70.MGGAAGTGAAAC	homer_25.AGATAASR	0.362731	0.241820	0.241820	0.362731	12	8	8	12	0.666667	0.666667	1.000000	D	4	37
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_70.MGGAAGTGAAAC	homer_26.YGGCCCCGCCCC	0.248461	0.248461	0.248461	0.248461	12	12	12	12	1.000000	1.000000	1.000000	R	0	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_70.MGGAAGTGAAAC	homer_27.AVCAGGAAGT	0.948500	0.442633	0.553291	0.663950	12	10	7	15	0.466667	0.583333	0.700000	D	-3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_70.MGGAAGTGAAAC	homer_28.RGKGGGCGGAGC	0.242412	0.242412	0.242412	0.242412	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_70.MGGAAGTGAAAC	homer_29.AWWWTGCTGAGTCAT	0.546625	0.191319	0.318865	0.255092	12	15	7	20	0.350000	0.583333	0.466667	R	5	51
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_70.MGGAAGTGAAAC	homer_30.CAAAGGTCAG	0.298933	0.249111	0.249111	0.298933	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_70.MGGAAGTGAAAC	homer_31.VTGACTCATC	0.577653	0.269571	0.336964	0.404357	12	10	7	15	0.466667	0.583333	0.700000	D	5	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_70.MGGAAGTGAAAC	homer_32.AAAGRGGAAGTG	0.967625	0.483813	0.645083	0.645083	12	12	8	16	0.500000	0.666667	0.666667	D	-4	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_70.MGGAAGTGAAAC	homer_33.GRAASTGAAAST	0.928445	0.785607	0.851074	0.851074	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_70.MGGAAGTGAAAC	homer_34.CCCCTCCCCCAC	0.530156	0.265078	0.353437	0.353437	12	12	8	16	0.500000	0.666667	0.666667	R	-4	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_70.MGGAAGTGAAAC	homer_35.GAAAGTGAAAGT	0.834676	0.706265	0.765120	0.765120	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_70.MGGAAGTGAAAC	homer_36.DATGASTCATHN	0.462504	0.277503	0.346878	0.346878	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_70.MGGAAGTGAAAC	homer_37.NDATGASTCAYN	0.527936	0.263968	0.351957	0.351957	12	12	8	16	0.500000	0.666667	0.666667	R	4	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_70.MGGAAGTGAAAC	homer_38.RATGASTCAT	0.491835	0.281048	0.327890	0.393468	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_70.MGGAAGTGAAAC	homer_39.DATGASTCAT	0.476478	0.272273	0.317652	0.381182	12	10	8	14	0.571429	0.666667	0.800000	D	4	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_70.MGGAAGTGAAAC	homer_40.AGTTTCAKTTTC	0.870272	0.736384	0.797749	0.797749	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_70.MGGAAGTGAAAC	homer_41.NNATGASTCATH	0.434296	0.260578	0.325722	0.325722	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_70.MGGAAGTGAAAC	homer_42.SAAACCACAG	0.243664	0.203053	0.203053	0.243664	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_70.MGGAAGTGAAAC	homer_43.GAAASYGAAASY	0.812127	0.687184	0.744450	0.744450	12	12	11	13	0.846154	0.916667	0.916667	D	1	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_70.MGGAAGTGAAAC	homer_44.AVCAGCTG	0.279270	0.186180	0.186180	0.279270	12	8	8	12	0.666667	0.666667	1.000000	D	0	37
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_70.MGGAAGTGAAAC	homer_45.SGTCACGTGR	0.362511	0.302093	0.302093	0.362511	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_70.MGGAAGTGAAAC	homer_46.NATGASTCABNN	0.446888	0.268133	0.335166	0.335166	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_70.MGGAAGTGAAAC	homer_47.GATGASTCATCN	0.442154	0.265292	0.331615	0.331615	12	12	9	15	0.600000	0.750000	0.750000	R	3	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_70.MGGAAGTGAAAC	homer_48.AGTTTCASTTTC	0.811149	0.686356	0.743553	0.743553	12	12	11	13	0.846154	0.916667	0.916667	R	1	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_70.MGGAAGTGAAAC	homer_49.RCAGGATGTGGT	0.631881	0.451344	0.526568	0.526568	12	12	10	14	0.714286	0.833333	0.833333	D	-2	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_70.MGGAAGTGAAAC	homer_50.GGGGGAATCCCC	0.339124	0.203475	0.254343	0.254343	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_70.MGGAAGTGAAAC	homer_51.GCTGTGGTTW	0.786046	0.174677	0.262015	0.314419	12	10	4	18	0.222222	0.333333	0.400000	R	8	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_70.MGGAAGTGAAAC	homer_52.GGATGACTCATC	0.429232	0.257539	0.321924	0.321924	12	12	9	15	0.600000	0.750000	0.750000	D	3	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_70.MGGAAGTGAAAC	homer_53.NWAACCACADNN	0.553700	0.145711	0.230708	0.230708	12	12	5	19	0.263158	0.416667	0.416667	D	7	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_70.MGGAAGTGAAAC	homer_54.ACCATCTGTT	0.268194	0.223495	0.223495	0.268194	12	10	10	12	0.833333	0.833333	1.000000	R	0	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_70.MGGAAGTGAAAC	homer_55.SVYTTCCNGGAARB	0.844340	0.375262	0.562893	0.482480	12	14	8	18	0.444444	0.666667	0.571429	R	-6	49
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_70.MGGAAGTGAAAC	homer_56.SCCTAGCAACAG	0.465419	0.232709	0.310279	0.310279	12	12	8	16	0.500000	0.666667	0.666667	D	-4	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_70.MGGAAGTGAAAC	homer_57.AAACCACARM	0.289622	0.200508	0.217217	0.260660	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_70.MGGAAGTGAAAC	homer_58.RTTATGYAAB	0.336933	0.280778	0.280778	0.336933	12	10	10	12	0.833333	0.833333	1.000000	D	2	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_70.MGGAAGTGAAAC	homer_59.NYTTCCWGGAAR	0.881245	0.362866	0.514060	0.514060	12	12	7	17	0.411765	0.583333	0.583333	R	-5	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_70.MGGAAGTGAAAC	homer_60.ASWTCCTGBT	0.812419	0.379129	0.473911	0.568693	12	10	7	15	0.466667	0.583333	0.700000	R	-3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_70.MGGAAGTGAAAC	homer_61.DGGGYGKGGC	0.358000	0.298334	0.298334	0.358000	12	10	10	12	0.833333	0.833333	1.000000	D	0	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_70.MGGAAGTGAAAC	homer_62.TWGTCTGV	0.236791	0.157861	0.157861	0.236791	12	8	8	12	0.666667	0.666667	1.000000	R	2	37
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_70.MGGAAGTGAAAC	homer_63.CTGGCAGSCTGCCA	0.249285	0.213672	0.249285	0.213672	12	14	12	14	0.857143	1.000000	0.857143	R	0	49
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_70.MGGAAGTGAAAC	homer_64.VGGGRATTYCCC	0.542454	0.223363	0.316432	0.316432	12	12	7	17	0.411765	0.583333	0.583333	R	5	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_70.MGGAAGTGAAAC	homer_65.CARRGKBCAAAGTYCA	0.361296	0.270972	0.361296	0.270972	12	16	12	16	0.750000	1.000000	0.750000	D	0	53
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_70.MGGAAGTGAAAC	homer_66.CCATTGTTNY	0.410512	0.234578	0.273675	0.328410	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_70.MGGAAGTGAAAC	homer_67.CYAAAAATAG	0.426496	0.243712	0.284331	0.341197	12	10	8	14	0.571429	0.666667	0.800000	D	-2	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_70.MGGAAGTGAAAC	homer_68.GGGGGGGG	0.371333	0.247555	0.247555	0.371333	12	8	8	12	0.666667	0.666667	1.000000	D	1	37
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_70.MGGAAGTGAAAC	homer_69.TTGAMCTTTG	0.345816	0.288180	0.288180	0.345816	12	10	10	12	0.833333	0.833333	1.000000	R	1	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_70.MGGAAGTGAAAC	homer_70.MGGAAGTGAAAC	1.000000	1.000000	1.000000	1.000000	12	12	12	12	1.000000	1.000000	1.000000	D	0	45
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_70.MGGAAGTGAAAC	homer_71.HACTTCCGGY	0.841643	0.480939	0.561095	0.673314	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_70.MGGAAGTGAAAC	homer_72.NRYTTCCGGY	0.791399	0.452228	0.527600	0.633119	12	10	8	14	0.571429	0.666667	0.800000	R	-2	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_70.MGGAAGTGAAAC	homer_73.AWWNTGCTGAGTCAT	0.553138	0.193598	0.322664	0.258131	12	15	7	20	0.350000	0.583333	0.466667	R	5	51
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_70.MGGAAGTGAAAC	homer_74.AGGCCTAG	0.186176	0.124117	0.124117	0.186176	12	8	8	12	0.666667	0.666667	1.000000	D	0	37
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_70.MGGAAGTGAAAC	homer_75.VTTACGTAAYNNNNN	0.388909	0.267375	0.356500	0.285200	12	15	11	16	0.687500	0.916667	0.733333	D	-4	51
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_70.MGGAAGTGAAAC	homer_76.TGCTGACTCA	0.264158	0.182879	0.198119	0.237742	12	10	9	13	0.692308	0.750000	0.900000	D	3	41
hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_70.MGGAAGTGAAAC	homer_77.ATTGCGCAAC	0.260628	0.217190	0.217190	0.260628	12	10	10	12	0.833333	0.833333	1.000000	R	2	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_71.HACTTCCGGY	homer_1.ATTTCCTGTN	0.775757	0.634710	0.698181	0.698181	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_71.HACTTCCGGY	homer_2.ACCGGAAGTG	0.985783	0.985783	0.985783	0.985783	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_71.HACTTCCGGY	homer_3.AACCGGAAGT	0.961187	0.786426	0.865068	0.865068	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_71.HACTTCCGGY	homer_4.ACAGGAAGTG	0.868276	0.868276	0.868276	0.868276	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_71.HACTTCCGGY	homer_5.RACCGGAAGT	0.967000	0.791181	0.870300	0.870300	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_71.HACTTCCGGY	homer_6.AGAGGAAGTG	0.731475	0.731475	0.731475	0.731475	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_71.HACTTCCGGY	homer_7.NNAYTTCCTGHN	0.923628	0.769690	0.923628	0.769690	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_71.HACTTCCGGY	homer_8.NRYTTCCGGH	0.967429	0.967429	0.967429	0.967429	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_71.HACTTCCGGY	homer_9.MACAGGAAGT	0.792039	0.648032	0.712835	0.712835	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_71.HACTTCCGGY	homer_10.ACTTCCKGKT	0.934110	0.764272	0.840699	0.840699	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_71.HACTTCCGGY	homer_11.ACVAGGAAGT	0.843998	0.690544	0.759598	0.759598	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_71.HACTTCCGGY	homer_12.YCTTATCTBN	0.272469	0.222929	0.245222	0.245222	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_71.HACTTCCGGY	homer_13.NBWGATAAGR	0.279632	0.228790	0.251669	0.251669	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_71.HACTTCCGGY	homer_14.TGGCAGTTGG	0.350262	0.233508	0.280210	0.280210	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_71.HACTTCCGGY	homer_15.AVCCGGAAGT	0.975264	0.797943	0.877738	0.877738	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_71.HACTTCCGGY	homer_16.ANCAGGAAGT	0.820137	0.671022	0.738124	0.738124	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_71.HACTTCCGGY	homer_17.SAGATAAGRV	0.292124	0.194749	0.233699	0.233699	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_71.HACTTCCGGY	homer_18.TGCTGAGTCA	0.238059	0.238059	0.238059	0.238059	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_71.HACTTCCGGY	homer_19.GCTATTTTTAGC	0.318605	0.265504	0.318605	0.265504	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_71.HACTTCCGGY	homer_20.GGCVGTTR	0.383340	0.243943	0.268338	0.335422	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_71.HACTTCCGGY	homer_21.CYTGGCABNSTGCCAR	0.456180	0.285113	0.456180	0.285113	10	16	10	16	0.625000	1.000000	0.625000	R	-6	49
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_71.HACTTCCGGY	homer_22.BBCTTATCTS	0.277198	0.184799	0.221758	0.221758	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_71.HACTTCCGGY	homer_23.VACAGGAAAT	0.845054	0.691408	0.760548	0.760548	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_71.HACTTCCGGY	homer_24.RGKGGGCGKGGC	0.320007	0.266672	0.320007	0.266672	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_71.HACTTCCGGY	homer_25.AGATAASR	0.295470	0.188027	0.206829	0.258537	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_71.HACTTCCGGY	homer_26.YGGCCCCGCCCC	0.414810	0.345675	0.414810	0.345675	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_71.HACTTCCGGY	homer_27.AVCAGGAAGT	0.910079	0.744610	0.819071	0.819071	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_71.HACTTCCGGY	homer_28.RGKGGGCGGAGC	0.485232	0.277275	0.388186	0.323488	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_71.HACTTCCGGY	homer_29.AWWWTGCTGAGTCAT	0.315745	0.210496	0.315745	0.210496	10	15	10	15	0.666667	1.000000	0.666667	D	0	47
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_71.HACTTCCGGY	homer_30.CAAAGGTCAG	0.286377	0.190918	0.229102	0.229102	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_71.HACTTCCGGY	homer_31.VTGACTCATC	0.193996	0.158724	0.174597	0.174597	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_71.HACTTCCGGY	homer_32.AAAGRGGAAGTG	0.783107	0.652589	0.783107	0.652589	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_71.HACTTCCGGY	homer_33.GRAASTGAAAST	0.597140	0.413405	0.537426	0.447855	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_71.HACTTCCGGY	homer_34.CCCCTCCCCCAC	0.363810	0.303175	0.363810	0.303175	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_71.HACTTCCGGY	homer_35.GAAAGTGAAAGT	0.531750	0.368135	0.478575	0.398813	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_71.HACTTCCGGY	homer_36.DATGASTCATHN	0.166687	0.138905	0.166687	0.138905	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_71.HACTTCCGGY	homer_37.NDATGASTCAYN	0.152812	0.105793	0.137531	0.114609	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_71.HACTTCCGGY	homer_38.RATGASTCAT	0.147715	0.120858	0.132943	0.132943	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_71.HACTTCCGGY	homer_39.DATGASTCAT	0.149285	0.122142	0.134357	0.134357	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_71.HACTTCCGGY	homer_40.AGTTTCAKTTTC	0.557772	0.386150	0.501994	0.418329	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_71.HACTTCCGGY	homer_41.NNATGASTCATH	0.147657	0.123048	0.147657	0.123048	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_71.HACTTCCGGY	homer_42.SAAACCACAG	0.380683	0.204983	0.266478	0.266478	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_71.HACTTCCGGY	homer_43.GAAASYGAAASY	0.612877	0.424300	0.551589	0.459658	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_71.HACTTCCGGY	homer_44.AVCAGCTG	0.372527	0.298022	0.298022	0.372527	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_71.HACTTCCGGY	homer_45.SGTCACGTGR	0.208531	0.139020	0.166825	0.166825	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_71.HACTTCCGGY	homer_46.NATGASTCABNN	0.130641	0.108868	0.130641	0.108868	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_71.HACTTCCGGY	homer_47.GATGASTCATCN	0.176044	0.146704	0.176044	0.146704	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_71.HACTTCCGGY	homer_48.AGTTTCASTTTC	0.541083	0.374596	0.486975	0.405812	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_71.HACTTCCGGY	homer_49.RCAGGATGTGGT	0.695653	0.579711	0.695653	0.579711	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_71.HACTTCCGGY	homer_50.GGGGGAATCCCC	0.427412	0.356177	0.427412	0.356177	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_71.HACTTCCGGY	homer_51.GCTGTGGTTW	0.317290	0.211527	0.253832	0.253832	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_71.HACTTCCGGY	homer_52.GGATGACTCATC	0.173556	0.144630	0.173556	0.144630	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_71.HACTTCCGGY	homer_53.NWAACCACADNN	0.345083	0.238903	0.310574	0.258812	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_71.HACTTCCGGY	homer_54.ACCATCTGTT	0.394107	0.394107	0.394107	0.394107	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_71.HACTTCCGGY	homer_55.SVYTTCCNGGAARB	0.773227	0.552305	0.773227	0.552305	10	14	10	14	0.714286	1.000000	0.714286	D	0	45
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_71.HACTTCCGGY	homer_56.SCCTAGCAACAG	0.369541	0.307951	0.369541	0.307951	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_71.HACTTCCGGY	homer_57.AAACCACARM	0.371431	0.247621	0.297145	0.297145	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_71.HACTTCCGGY	homer_58.RTTATGYAAB	0.345709	0.230472	0.276567	0.276567	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_71.HACTTCCGGY	homer_59.NYTTCCWGGAAR	0.750717	0.519727	0.675645	0.563038	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_71.HACTTCCGGY	homer_60.ASWTCCTGBT	0.837265	0.685035	0.753538	0.753538	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_71.HACTTCCGGY	homer_61.DGGGYGKGGC	0.362504	0.241669	0.290003	0.290003	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_71.HACTTCCGGY	homer_62.TWGTCTGV	0.232175	0.185740	0.185740	0.232175	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_71.HACTTCCGGY	homer_63.CTGGCAGSCTGCCA	0.487886	0.292732	0.439097	0.313641	10	14	9	15	0.600000	0.900000	0.642857	R	-5	45
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_71.HACTTCCGGY	homer_64.VGGGRATTYCCC	0.475789	0.329393	0.428210	0.356842	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_71.HACTTCCGGY	homer_65.CARRGKBCAAAGTYCA	0.236860	0.148038	0.236860	0.148038	10	16	10	16	0.625000	1.000000	0.625000	R	-2	49
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_71.HACTTCCGGY	homer_66.CCATTGTTNY	0.230709	0.230709	0.230709	0.230709	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_71.HACTTCCGGY	homer_67.CYAAAAATAG	0.416048	0.340403	0.374443	0.374443	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_71.HACTTCCGGY	homer_68.GGGGGGGG	0.465213	0.296045	0.325649	0.407062	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_71.HACTTCCGGY	homer_69.TTGAMCTTTG	0.317459	0.211640	0.253967	0.253967	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_71.HACTTCCGGY	homer_70.MGGAAGTGAAAC	0.841643	0.480939	0.673314	0.561095	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_71.HACTTCCGGY	homer_71.HACTTCCGGY	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_71.HACTTCCGGY	homer_72.NRYTTCCGGY	0.987219	0.987219	0.987219	0.987219	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_71.HACTTCCGGY	homer_73.AWWNTGCTGAGTCAT	0.312054	0.208036	0.312054	0.208036	10	15	10	15	0.666667	1.000000	0.666667	D	0	47
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_71.HACTTCCGGY	homer_74.AGGCCTAG	0.222356	0.177885	0.177885	0.222356	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_71.HACTTCCGGY	homer_75.VTTACGTAAYNNNNN	0.390488	0.260325	0.390488	0.260325	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_71.HACTTCCGGY	homer_76.TGCTGACTCA	0.305776	0.305776	0.305776	0.305776	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_71.HACTTCCGGY	homer_77.ATTGCGCAAC	0.431617	0.287745	0.345294	0.345294	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_72.NRYTTCCGGY	homer_1.ATTTCCTGTN	0.772097	0.631716	0.694888	0.694888	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_72.NRYTTCCGGY	homer_2.ACCGGAAGTG	0.966463	0.966463	0.966463	0.966463	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_72.NRYTTCCGGY	homer_3.AACCGGAAGT	0.928806	0.759932	0.835925	0.835925	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_72.NRYTTCCGGY	homer_4.ACAGGAAGTG	0.822677	0.822677	0.822677	0.822677	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_72.NRYTTCCGGY	homer_5.RACCGGAAGT	0.935092	0.765076	0.841583	0.841583	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_72.NRYTTCCGGY	homer_6.AGAGGAAGTG	0.665560	0.665560	0.665560	0.665560	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_72.NRYTTCCGGY	homer_7.NNAYTTCCTGHN	0.917317	0.764431	0.917317	0.764431	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_72.NRYTTCCGGY	homer_8.NRYTTCCGGH	0.969998	0.969998	0.969998	0.969998	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_72.NRYTTCCGGY	homer_9.MACAGGAAGT	0.765871	0.626621	0.689283	0.689283	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_72.NRYTTCCGGY	homer_10.ACTTCCKGKT	0.891480	0.729393	0.802332	0.802332	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_72.NRYTTCCGGY	homer_11.ACVAGGAAGT	0.794602	0.650129	0.715142	0.715142	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_72.NRYTTCCGGY	homer_12.YCTTATCTBN	0.325349	0.266195	0.292814	0.292814	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_72.NRYTTCCGGY	homer_13.NBWGATAAGR	0.334843	0.273963	0.301359	0.301359	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_72.NRYTTCCGGY	homer_14.TGGCAGTTGG	0.302649	0.201766	0.242119	0.242119	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_72.NRYTTCCGGY	homer_15.AVCCGGAAGT	0.947828	0.775496	0.853045	0.853045	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_72.NRYTTCCGGY	homer_16.ANCAGGAAGT	0.774628	0.633786	0.697165	0.697165	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_72.NRYTTCCGGY	homer_17.SAGATAAGRV	0.350468	0.233645	0.280374	0.280374	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_72.NRYTTCCGGY	homer_18.TGCTGAGTCA	0.264837	0.264837	0.264837	0.264837	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_72.NRYTTCCGGY	homer_19.GCTATTTTTAGC	0.333818	0.278182	0.333818	0.278182	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_72.NRYTTCCGGY	homer_20.GGCVGTTR	0.329046	0.263237	0.263237	0.329046	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_72.NRYTTCCGGY	homer_21.CYTGGCABNSTGCCAR	0.455646	0.284779	0.455646	0.284779	10	16	10	16	0.625000	1.000000	0.625000	R	-6	49
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_72.NRYTTCCGGY	homer_22.BBCTTATCTS	0.335225	0.223484	0.268180	0.268180	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_72.NRYTTCCGGY	homer_23.VACAGGAAAT	0.841269	0.688311	0.757142	0.757142	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_72.NRYTTCCGGY	homer_24.RGKGGGCGKGGC	0.259642	0.216368	0.259642	0.216368	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_72.NRYTTCCGGY	homer_25.AGATAASR	0.366695	0.233351	0.256686	0.320858	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_72.NRYTTCCGGY	homer_26.YGGCCCCGCCCC	0.410990	0.342492	0.410990	0.342492	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_72.NRYTTCCGGY	homer_27.AVCAGGAAGT	0.877217	0.717723	0.789496	0.789496	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_72.NRYTTCCGGY	homer_28.RGKGGGCGGAGC	0.483290	0.276166	0.386632	0.322193	10	12	8	14	0.571429	0.800000	0.666667	R	2	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_72.NRYTTCCGGY	homer_29.AWWWTGCTGAGTCAT	0.326974	0.217983	0.326974	0.217983	10	15	10	15	0.666667	1.000000	0.666667	D	0	47
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_72.NRYTTCCGGY	homer_30.CAAAGGTCAG	0.295860	0.197240	0.236688	0.236688	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_72.NRYTTCCGGY	homer_31.VTGACTCATC	0.218956	0.179145	0.197060	0.197060	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_72.NRYTTCCGGY	homer_32.AAAGRGGAAGTG	0.732438	0.610365	0.732438	0.610365	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_72.NRYTTCCGGY	homer_33.GRAASTGAAAST	0.573058	0.396732	0.515752	0.429793	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_72.NRYTTCCGGY	homer_34.CCCCTCCCCCAC	0.307053	0.255878	0.307053	0.255878	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_72.NRYTTCCGGY	homer_35.GAAAGTGAAAGT	0.428101	0.356751	0.428101	0.356751	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_72.NRYTTCCGGY	homer_36.DATGASTCATHN	0.188675	0.157229	0.188675	0.157229	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_72.NRYTTCCGGY	homer_37.NDATGASTCAYN	0.174958	0.121125	0.157462	0.131219	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_72.NRYTTCCGGY	homer_38.RATGASTCAT	0.170070	0.139149	0.153063	0.153063	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_72.NRYTTCCGGY	homer_39.DATGASTCAT	0.170921	0.139845	0.153829	0.153829	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_72.NRYTTCCGGY	homer_40.AGTTTCAKTTTC	0.484670	0.403892	0.484670	0.403892	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_72.NRYTTCCGGY	homer_41.NNATGASTCATH	0.170224	0.141853	0.170224	0.141853	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_72.NRYTTCCGGY	homer_42.SAAACCACAG	0.396795	0.213659	0.277757	0.277757	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_72.NRYTTCCGGY	homer_43.GAAASYGAAASY	0.589269	0.407955	0.530342	0.441951	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_72.NRYTTCCGGY	homer_44.AVCAGCTG	0.367503	0.294002	0.294002	0.367503	10	8	8	10	0.800000	0.800000	1.000000	R	2	33
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_72.NRYTTCCGGY	homer_45.SGTCACGTGR	0.219992	0.146661	0.175993	0.175993	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_72.NRYTTCCGGY	homer_46.NATGASTCABNN	0.158789	0.132324	0.158789	0.132324	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_72.NRYTTCCGGY	homer_47.GATGASTCATCN	0.198472	0.165393	0.198472	0.165393	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_72.NRYTTCCGGY	homer_48.AGTTTCASTTTC	0.466985	0.389154	0.466985	0.389154	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_72.NRYTTCCGGY	homer_49.RCAGGATGTGGT	0.650638	0.542199	0.650638	0.542199	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_72.NRYTTCCGGY	homer_50.GGGGGAATCCCC	0.428923	0.357435	0.428923	0.357435	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_72.NRYTTCCGGY	homer_51.GCTGTGGTTW	0.338202	0.225468	0.270562	0.270562	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_72.NRYTTCCGGY	homer_52.GGATGACTCATC	0.191218	0.159349	0.191218	0.159349	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_72.NRYTTCCGGY	homer_53.NWAACCACADNN	0.370244	0.256323	0.333219	0.277683	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_72.NRYTTCCGGY	homer_54.ACCATCTGTT	0.386753	0.386753	0.386753	0.386753	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_72.NRYTTCCGGY	homer_55.SVYTTCCNGGAARB	0.769309	0.549506	0.769309	0.549506	10	14	10	14	0.714286	1.000000	0.714286	D	0	45
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_72.NRYTTCCGGY	homer_56.SCCTAGCAACAG	0.358532	0.298776	0.358532	0.298776	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_72.NRYTTCCGGY	homer_57.AAACCACARM	0.396964	0.264642	0.317571	0.317571	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_72.NRYTTCCGGY	homer_58.RTTATGYAAB	0.315051	0.210034	0.252041	0.252041	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_72.NRYTTCCGGY	homer_59.NYTTCCWGGAAR	0.756170	0.523503	0.680553	0.567128	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_72.NRYTTCCGGY	homer_60.ASWTCCTGBT	0.849994	0.695449	0.764994	0.764994	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_72.NRYTTCCGGY	homer_61.DGGGYGKGGC	0.310208	0.206806	0.248167	0.248167	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_72.NRYTTCCGGY	homer_62.TWGTCTGV	0.256731	0.205384	0.205384	0.256731	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_72.NRYTTCCGGY	homer_63.CTGGCAGSCTGCCA	0.473067	0.283840	0.425760	0.304115	10	14	9	15	0.600000	0.900000	0.642857	R	-5	45
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_72.NRYTTCCGGY	homer_64.VGGGRATTYCCC	0.480765	0.332837	0.432688	0.360574	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_72.NRYTTCCGGY	homer_65.CARRGKBCAAAGTYCA	0.329066	0.121235	0.230346	0.143966	10	16	7	19	0.368421	0.700000	0.437500	D	-9	49
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_72.NRYTTCCGGY	homer_66.CCATTGTTNY	0.194711	0.194711	0.194711	0.194711	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_72.NRYTTCCGGY	homer_67.CYAAAAATAG	0.438759	0.358985	0.394883	0.394883	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_72.NRYTTCCGGY	homer_68.GGGGGGGG	0.405435	0.258004	0.283805	0.354756	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_72.NRYTTCCGGY	homer_69.TTGAMCTTTG	0.320188	0.213459	0.256150	0.256150	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_72.NRYTTCCGGY	homer_70.MGGAAGTGAAAC	0.791399	0.452228	0.633119	0.527600	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_72.NRYTTCCGGY	homer_71.HACTTCCGGY	0.987219	0.987219	0.987219	0.987219	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_72.NRYTTCCGGY	homer_72.NRYTTCCGGY	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_72.NRYTTCCGGY	homer_73.AWWNTGCTGAGTCAT	0.324447	0.216298	0.324447	0.216298	10	15	10	15	0.666667	1.000000	0.666667	D	0	47
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_72.NRYTTCCGGY	homer_74.AGGCCTAG	0.209806	0.167845	0.167845	0.209806	10	8	8	10	0.800000	0.800000	1.000000	R	0	33
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_72.NRYTTCCGGY	homer_75.VTTACGTAAYNNNNN	0.359767	0.239845	0.359767	0.239845	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_72.NRYTTCCGGY	homer_76.TGCTGACTCA	0.328203	0.328203	0.328203	0.328203	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_72.NRYTTCCGGY	homer_77.ATTGCGCAAC	0.411602	0.274401	0.329281	0.329281	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_73.AWWNTGCTGAGTCAT	homer_1.ATTTCCTGTN	0.529753	0.353169	0.353169	0.529753	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_73.AWWNTGCTGAGTCAT	homer_2.ACCGGAAGTG	0.332532	0.221688	0.221688	0.332532	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_73.AWWNTGCTGAGTCAT	homer_3.AACCGGAAGT	0.292000	0.194666	0.194666	0.292000	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_73.AWWNTGCTGAGTCAT	homer_4.ACAGGAAGTG	0.389912	0.259941	0.259941	0.389912	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_73.AWWNTGCTGAGTCAT	homer_5.RACCGGAAGT	0.322814	0.215210	0.215210	0.322814	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_73.AWWNTGCTGAGTCAT	homer_6.AGAGGAAGTG	0.307623	0.205082	0.205082	0.307623	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_73.AWWNTGCTGAGTCAT	homer_7.NNAYTTCCTGHN	0.424954	0.292156	0.311633	0.389541	15	12	11	16	0.687500	0.733333	0.916667	D	-1	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_73.AWWNTGCTGAGTCAT	homer_8.NRYTTCCGGH	0.344803	0.229869	0.229869	0.344803	15	10	10	15	0.666667	0.666667	1.000000	D	0	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_73.AWWNTGCTGAGTCAT	homer_9.MACAGGAAGT	0.470156	0.313438	0.313438	0.470156	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_73.AWWNTGCTGAGTCAT	homer_10.ACTTCCKGKT	0.316472	0.210981	0.210981	0.316472	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_73.AWWNTGCTGAGTCAT	homer_11.ACVAGGAAGT	0.311559	0.207706	0.207706	0.311559	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_73.AWWNTGCTGAGTCAT	homer_12.YCTTATCTBN	0.410972	0.273981	0.273981	0.410972	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_73.AWWNTGCTGAGTCAT	homer_13.NBWGATAAGR	0.422791	0.281861	0.281861	0.422791	15	10	10	15	0.666667	0.666667	1.000000	D	2	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_73.AWWNTGCTGAGTCAT	homer_14.TGGCAGTTGG	0.380941	0.214279	0.228565	0.342847	15	10	9	16	0.562500	0.600000	0.900000	R	-1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_73.AWWNTGCTGAGTCAT	homer_15.AVCCGGAAGT	0.312008	0.208005	0.208005	0.312008	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_73.AWWNTGCTGAGTCAT	homer_16.ANCAGGAAGT	0.362215	0.241477	0.241477	0.362215	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_73.AWWNTGCTGAGTCAT	homer_17.SAGATAAGRV	0.387453	0.258302	0.258302	0.387453	15	10	10	15	0.666667	0.666667	1.000000	D	3	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_73.AWWNTGCTGAGTCAT	homer_18.TGCTGAGTCA	0.978449	0.652299	0.652299	0.978449	15	10	10	15	0.666667	0.666667	1.000000	D	4	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_73.AWWNTGCTGAGTCAT	homer_19.GCTATTTTTAGC	0.430308	0.150608	0.200810	0.251013	15	12	7	20	0.350000	0.466667	0.583333	R	-5	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_73.AWWNTGCTGAGTCAT	homer_20.GGCVGTTR	0.396547	0.211492	0.211492	0.396547	15	8	8	15	0.533333	0.533333	1.000000	R	0	43
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_73.AWWNTGCTGAGTCAT	homer_21.CYTGGCABNSTGCCAR	0.364164	0.200290	0.267054	0.250363	15	16	11	20	0.550000	0.733333	0.687500	R	-5	59
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_73.AWWNTGCTGAGTCAT	homer_22.BBCTTATCTS	0.374555	0.249704	0.249704	0.374555	15	10	10	15	0.666667	0.666667	1.000000	R	3	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_73.AWWNTGCTGAGTCAT	homer_23.VACAGGAAAT	0.500735	0.333824	0.333824	0.500735	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_73.AWWNTGCTGAGTCAT	homer_24.RGKGGGCGKGGC	0.215846	0.172677	0.172677	0.215846	15	12	12	15	0.800000	0.800000	1.000000	D	1	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_73.AWWNTGCTGAGTCAT	homer_25.AGATAASR	0.352410	0.187952	0.187952	0.352410	15	8	8	15	0.533333	0.533333	1.000000	D	4	43
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_73.AWWNTGCTGAGTCAT	homer_26.YGGCCCCGCCCC	0.270712	0.216570	0.216570	0.270712	15	12	12	15	0.800000	0.800000	1.000000	R	2	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_73.AWWNTGCTGAGTCAT	homer_27.AVCAGGAAGT	0.323329	0.215553	0.215553	0.323329	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_73.AWWNTGCTGAGTCAT	homer_28.RGKGGGCGGAGC	0.380365	0.304292	0.304292	0.380365	15	12	12	15	0.800000	0.800000	1.000000	D	0	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_73.AWWNTGCTGAGTCAT	homer_29.AWWWTGCTGAGTCAT	0.987301	0.987301	0.987301	0.987301	15	15	15	15	1.000000	1.000000	1.000000	D	0	57
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_73.AWWNTGCTGAGTCAT	homer_30.CAAAGGTCAG	0.282202	0.188134	0.188134	0.282202	15	10	10	15	0.666667	0.666667	1.000000	D	5	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_73.AWWNTGCTGAGTCAT	homer_31.VTGACTCATC	0.907803	0.605202	0.605202	0.907803	15	10	10	15	0.666667	0.666667	1.000000	R	5	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_73.AWWNTGCTGAGTCAT	homer_32.AAAGRGGAAGTG	0.581407	0.166116	0.232563	0.290703	15	12	6	21	0.285714	0.400000	0.500000	D	-6	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_73.AWWNTGCTGAGTCAT	homer_33.GRAASTGAAAST	0.212554	0.170043	0.170043	0.212554	15	12	12	15	0.800000	0.800000	1.000000	R	1	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_73.AWWNTGCTGAGTCAT	homer_34.CCCCTCCCCCAC	0.169850	0.135880	0.135880	0.169850	15	12	12	15	0.800000	0.800000	1.000000	D	3	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_73.AWWNTGCTGAGTCAT	homer_35.GAAAGTGAAAGT	0.288651	0.230921	0.230921	0.288651	15	12	12	15	0.800000	0.800000	1.000000	R	1	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_73.AWWNTGCTGAGTCAT	homer_36.DATGASTCATHN	0.830516	0.570980	0.609045	0.761306	15	12	11	16	0.687500	0.733333	0.916667	R	4	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_73.AWWNTGCTGAGTCAT	homer_37.NDATGASTCAYN	0.825529	0.567551	0.605388	0.756735	15	12	11	16	0.687500	0.733333	0.916667	D	4	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_73.AWWNTGCTGAGTCAT	homer_38.RATGASTCAT	0.871621	0.581081	0.581081	0.871621	15	10	10	15	0.666667	0.666667	1.000000	D	5	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_73.AWWNTGCTGAGTCAT	homer_39.DATGASTCAT	0.861384	0.574256	0.574256	0.861384	15	10	10	15	0.666667	0.666667	1.000000	D	5	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_73.AWWNTGCTGAGTCAT	homer_40.AGTTTCAKTTTC	0.237627	0.190102	0.190102	0.237627	15	12	12	15	0.800000	0.800000	1.000000	D	1	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_73.AWWNTGCTGAGTCAT	homer_41.NNATGASTCATH	0.817899	0.562306	0.599793	0.749741	15	12	11	16	0.687500	0.733333	0.916667	D	4	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_73.AWWNTGCTGAGTCAT	homer_42.SAAACCACAG	0.381290	0.254193	0.254193	0.381290	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_73.AWWNTGCTGAGTCAT	homer_43.GAAASYGAAASY	0.221134	0.176907	0.176907	0.221134	15	12	12	15	0.800000	0.800000	1.000000	R	1	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_73.AWWNTGCTGAGTCAT	homer_44.AVCAGCTG	0.633021	0.337611	0.337611	0.633021	15	8	8	15	0.533333	0.533333	1.000000	D	1	43
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_73.AWWNTGCTGAGTCAT	homer_45.SGTCACGTGR	0.650369	0.205380	0.260148	0.390221	15	10	6	19	0.315789	0.400000	0.600000	D	9	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_73.AWWNTGCTGAGTCAT	homer_46.NATGASTCABNN	0.832932	0.572641	0.610817	0.763521	15	12	11	16	0.687500	0.733333	0.916667	R	4	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_73.AWWNTGCTGAGTCAT	homer_47.GATGASTCATCN	0.843354	0.579806	0.618460	0.773075	15	12	11	16	0.687500	0.733333	0.916667	R	4	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_73.AWWNTGCTGAGTCAT	homer_48.AGTTTCASTTTC	0.332285	0.265828	0.265828	0.332285	15	12	12	15	0.800000	0.800000	1.000000	D	1	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_73.AWWNTGCTGAGTCAT	homer_49.RCAGGATGTGGT	0.356892	0.209937	0.237928	0.297410	15	12	10	17	0.588235	0.666667	0.833333	R	-2	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_73.AWWNTGCTGAGTCAT	homer_50.GGGGGAATCCCC	0.294933	0.202767	0.216284	0.270356	15	12	11	16	0.687500	0.733333	0.916667	D	4	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_73.AWWNTGCTGAGTCAT	homer_51.GCTGTGGTTW	0.411627	0.274418	0.274418	0.411627	15	10	10	15	0.666667	0.666667	1.000000	D	0	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_73.AWWNTGCTGAGTCAT	homer_52.GGATGACTCATC	0.812268	0.558434	0.595663	0.744579	15	12	11	16	0.687500	0.733333	0.916667	D	4	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_73.AWWNTGCTGAGTCAT	homer_53.NWAACCACADNN	0.394740	0.271384	0.289476	0.361845	15	12	11	16	0.687500	0.733333	0.916667	R	-1	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_73.AWWNTGCTGAGTCAT	homer_54.ACCATCTGTT	0.366983	0.244656	0.244656	0.366983	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_73.AWWNTGCTGAGTCAT	homer_55.SVYTTCCNGGAARB	0.154823	0.144502	0.144502	0.154823	15	14	14	15	0.933333	0.933333	1.000000	D	1	55
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_73.AWWNTGCTGAGTCAT	homer_56.SCCTAGCAACAG	0.421103	0.336882	0.336882	0.421103	15	12	12	15	0.800000	0.800000	1.000000	R	0	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_73.AWWNTGCTGAGTCAT	homer_57.AAACCACARM	0.334861	0.223240	0.223240	0.334861	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_73.AWWNTGCTGAGTCAT	homer_58.RTTATGYAAB	0.333716	0.222478	0.222478	0.333716	15	10	10	15	0.666667	0.666667	1.000000	R	5	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_73.AWWNTGCTGAGTCAT	homer_59.NYTTCCWGGAAR	0.181307	0.145046	0.145046	0.181307	15	12	12	15	0.800000	0.800000	1.000000	R	3	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_73.AWWNTGCTGAGTCAT	homer_60.ASWTCCTGBT	0.387613	0.258408	0.258408	0.387613	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_73.AWWNTGCTGAGTCAT	homer_61.DGGGYGKGGC	0.380187	0.253458	0.253458	0.380187	15	10	10	15	0.666667	0.666667	1.000000	D	3	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_73.AWWNTGCTGAGTCAT	homer_62.TWGTCTGV	0.471342	0.251382	0.251382	0.471342	15	8	8	15	0.533333	0.533333	1.000000	D	2	43
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_73.AWWNTGCTGAGTCAT	homer_63.CTGGCAGSCTGCCA	0.190824	0.155045	0.165381	0.177194	15	14	13	16	0.812500	0.866667	0.928571	D	2	55
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_73.AWWNTGCTGAGTCAT	homer_64.VGGGRATTYCCC	0.153075	0.122460	0.122460	0.153075	15	12	12	15	0.800000	0.800000	1.000000	D	3	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_73.AWWNTGCTGAGTCAT	homer_65.CARRGKBCAAAGTYCA	0.295609	0.277134	0.295609	0.277134	15	16	15	16	0.937500	1.000000	0.937500	D	-1	59
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_73.AWWNTGCTGAGTCAT	homer_66.CCATTGTTNY	0.330214	0.220143	0.220143	0.330214	15	10	10	15	0.666667	0.666667	1.000000	D	0	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_73.AWWNTGCTGAGTCAT	homer_67.CYAAAAATAG	0.243390	0.162260	0.162260	0.243390	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_73.AWWNTGCTGAGTCAT	homer_68.GGGGGGGG	0.173481	0.092523	0.092523	0.173481	15	8	8	15	0.533333	0.533333	1.000000	D	3	43
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_73.AWWNTGCTGAGTCAT	homer_69.TTGAMCTTTG	0.345177	0.230118	0.230118	0.345177	15	10	10	15	0.666667	0.666667	1.000000	R	5	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_73.AWWNTGCTGAGTCAT	homer_70.MGGAAGTGAAAC	0.553138	0.193598	0.258131	0.322664	15	12	7	20	0.350000	0.466667	0.583333	R	8	51
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_73.AWWNTGCTGAGTCAT	homer_71.HACTTCCGGY	0.312054	0.208036	0.208036	0.312054	15	10	10	15	0.666667	0.666667	1.000000	D	0	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_73.AWWNTGCTGAGTCAT	homer_72.NRYTTCCGGY	0.324447	0.216298	0.216298	0.324447	15	10	10	15	0.666667	0.666667	1.000000	D	0	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_73.AWWNTGCTGAGTCAT	homer_73.AWWNTGCTGAGTCAT	1.000000	1.000000	1.000000	1.000000	15	15	15	15	1.000000	1.000000	1.000000	D	0	57
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_73.AWWNTGCTGAGTCAT	homer_74.AGGCCTAG	0.282786	0.150819	0.150819	0.282786	15	8	8	15	0.533333	0.533333	1.000000	R	7	43
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_73.AWWNTGCTGAGTCAT	homer_75.VTTACGTAAYNNNNN	0.337469	0.337469	0.337469	0.337469	15	15	15	15	1.000000	1.000000	1.000000	R	0	57
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_73.AWWNTGCTGAGTCAT	homer_76.TGCTGACTCA	0.891896	0.594598	0.594598	0.891896	15	10	10	15	0.666667	0.666667	1.000000	D	4	47
hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_73.AWWNTGCTGAGTCAT	homer_77.ATTGCGCAAC	0.402731	0.268487	0.268487	0.402731	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_74.AGGCCTAG	homer_1.ATTTCCTGTN	0.286069	0.228855	0.286069	0.228855	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_74.AGGCCTAG	homer_2.ACCGGAAGTG	0.228798	0.183038	0.228798	0.183038	8	10	8	10	0.800000	1.000000	0.800000	D	-2	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_74.AGGCCTAG	homer_3.AACCGGAAGT	0.446798	0.171846	0.279249	0.223399	8	10	5	13	0.384615	0.625000	0.500000	R	-5	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_74.AGGCCTAG	homer_4.ACAGGAAGTG	0.291731	0.233384	0.291731	0.233384	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_74.AGGCCTAG	homer_5.RACCGGAAGT	0.216433	0.173146	0.216433	0.173146	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_74.AGGCCTAG	homer_6.AGAGGAAGTG	0.286101	0.228881	0.286101	0.228881	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_74.AGGCCTAG	homer_7.NNAYTTCCTGHN	0.305859	0.203906	0.305859	0.203906	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_74.AGGCCTAG	homer_8.NRYTTCCGGH	0.299117	0.239294	0.299117	0.239294	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_74.AGGCCTAG	homer_9.MACAGGAAGT	0.305697	0.244558	0.305697	0.244558	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_74.AGGCCTAG	homer_10.ACTTCCKGKT	0.278427	0.222742	0.278427	0.222742	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_74.AGGCCTAG	homer_11.ACVAGGAAGT	0.313314	0.250651	0.313314	0.250651	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_74.AGGCCTAG	homer_12.YCTTATCTBN	0.705566	0.141113	0.264587	0.211670	8	10	3	15	0.200000	0.375000	0.300000	R	-7	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_74.AGGCCTAG	homer_13.NBWGATAAGR	0.643608	0.128722	0.241353	0.193082	8	10	3	15	0.200000	0.375000	0.300000	D	-7	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_74.AGGCCTAG	homer_14.TGGCAGTTGG	0.481533	0.240767	0.361150	0.288920	8	10	6	12	0.500000	0.750000	0.600000	R	-4	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_74.AGGCCTAG	homer_15.AVCCGGAAGT	0.439678	0.169107	0.274798	0.219839	8	10	5	13	0.384615	0.625000	0.500000	R	-5	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_74.AGGCCTAG	homer_16.ANCAGGAAGT	0.348550	0.278840	0.348550	0.278840	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_74.AGGCCTAG	homer_17.SAGATAAGRV	0.645223	0.184349	0.322611	0.258089	8	10	4	14	0.285714	0.500000	0.400000	D	-6	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_74.AGGCCTAG	homer_18.TGCTGAGTCA	0.250310	0.159288	0.219021	0.175217	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_74.AGGCCTAG	homer_19.GCTATTTTTAGC	0.313871	0.134516	0.235403	0.156936	8	12	6	14	0.428571	0.750000	0.500000	R	2	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_74.AGGCCTAG	homer_20.GGCVGTTR	0.657346	0.298794	0.410841	0.410841	8	8	5	11	0.454545	0.625000	0.625000	R	-3	29
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_74.AGGCCTAG	homer_21.CYTGGCABNSTGCCAR	0.624864	0.312432	0.624864	0.312432	8	16	8	16	0.500000	1.000000	0.500000	R	-8	45
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_74.AGGCCTAG	homer_22.BBCTTATCTS	0.581408	0.166117	0.290704	0.232563	8	10	4	14	0.285714	0.500000	0.400000	R	-6	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_74.AGGCCTAG	homer_23.VACAGGAAAT	0.259794	0.207835	0.259794	0.207835	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_74.AGGCCTAG	homer_24.RGKGGGCGKGGC	0.477724	0.318483	0.477724	0.318483	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_74.AGGCCTAG	homer_25.AGATAASR	0.896870	0.128124	0.224217	0.224217	8	8	2	14	0.142857	0.250000	0.250000	D	6	29
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_74.AGGCCTAG	homer_26.YGGCCCCGCCCC	0.527702	0.351802	0.527702	0.351802	8	12	8	12	0.666667	1.000000	0.666667	D	0	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_74.AGGCCTAG	homer_27.AVCAGGAAGT	0.309285	0.247428	0.309285	0.247428	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_74.AGGCCTAG	homer_28.RGKGGGCGGAGC	0.473929	0.315952	0.473929	0.315952	8	12	8	12	0.666667	1.000000	0.666667	D	-3	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_74.AGGCCTAG	homer_29.AWWWTGCTGAGTCAT	0.329019	0.175477	0.329019	0.175477	8	15	8	15	0.533333	1.000000	0.533333	R	0	43
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_74.AGGCCTAG	homer_30.CAAAGGTCAG	0.554424	0.443539	0.554424	0.443539	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_74.AGGCCTAG	homer_31.VTGACTCATC	0.227624	0.182099	0.227624	0.182099	8	10	8	10	0.800000	1.000000	0.800000	D	0	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_74.AGGCCTAG	homer_32.AAAGRGGAAGTG	0.218211	0.145474	0.218211	0.145474	8	12	8	12	0.666667	1.000000	0.666667	D	-4	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_74.AGGCCTAG	homer_33.GRAASTGAAAST	0.687030	0.076337	0.171757	0.114505	8	12	2	18	0.111111	0.250000	0.166667	R	6	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_74.AGGCCTAG	homer_34.CCCCTCCCCCAC	0.245260	0.163506	0.245260	0.163506	8	12	8	12	0.666667	1.000000	0.666667	R	-2	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_74.AGGCCTAG	homer_35.GAAAGTGAAAGT	0.584217	0.064913	0.146054	0.097369	8	12	2	18	0.111111	0.250000	0.166667	R	6	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_74.AGGCCTAG	homer_36.DATGASTCATHN	0.253481	0.168987	0.253481	0.168987	8	12	8	12	0.666667	1.000000	0.666667	D	-4	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_74.AGGCCTAG	homer_37.NDATGASTCAYN	0.224733	0.121010	0.196641	0.131094	8	12	7	13	0.538462	0.875000	0.583333	D	-5	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_74.AGGCCTAG	homer_38.RATGASTCAT	0.263041	0.167390	0.230161	0.184129	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_74.AGGCCTAG	homer_39.DATGASTCAT	0.261583	0.166462	0.228885	0.183108	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_74.AGGCCTAG	homer_40.AGTTTCAKTTTC	0.924262	0.102696	0.231066	0.154044	8	12	2	18	0.111111	0.250000	0.166667	D	6	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_74.AGGCCTAG	homer_41.NNATGASTCATH	0.235861	0.127002	0.206379	0.137586	8	12	7	13	0.538462	0.875000	0.583333	D	-5	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_74.AGGCCTAG	homer_42.SAAACCACAG	0.355626	0.226307	0.311172	0.248938	8	10	7	11	0.636364	0.875000	0.700000	R	-3	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_74.AGGCCTAG	homer_43.GAAASYGAAASY	0.709855	0.078873	0.177464	0.118309	8	12	2	18	0.111111	0.250000	0.166667	R	6	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_74.AGGCCTAG	homer_44.AVCAGCTG	0.254594	0.152756	0.190945	0.190945	8	8	6	10	0.600000	0.750000	0.750000	D	2	29
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_74.AGGCCTAG	homer_45.SGTCACGTGR	0.415174	0.264202	0.363277	0.290622	8	10	7	11	0.636364	0.875000	0.700000	D	1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_74.AGGCCTAG	homer_46.NATGASTCABNN	0.228866	0.152578	0.228866	0.152578	8	12	8	12	0.666667	1.000000	0.666667	D	-4	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_74.AGGCCTAG	homer_47.GATGASTCATCN	0.251217	0.167478	0.251217	0.167478	8	12	8	12	0.666667	1.000000	0.666667	D	-4	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_74.AGGCCTAG	homer_48.AGTTTCASTTTC	0.909980	0.101109	0.227495	0.151663	8	12	2	18	0.111111	0.250000	0.166667	D	6	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_74.AGGCCTAG	homer_49.RCAGGATGTGGT	0.330310	0.220207	0.330310	0.220207	8	12	8	12	0.666667	1.000000	0.666667	R	-4	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_74.AGGCCTAG	homer_50.GGGGGAATCCCC	0.305479	0.203653	0.305479	0.203653	8	12	8	12	0.666667	1.000000	0.666667	R	-1	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_74.AGGCCTAG	homer_51.GCTGTGGTTW	0.309497	0.154749	0.232123	0.185698	8	10	6	12	0.500000	0.750000	0.600000	D	-4	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_74.AGGCCTAG	homer_52.GGATGACTCATC	0.305048	0.203366	0.305048	0.203366	8	12	8	12	0.666667	1.000000	0.666667	R	-4	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_74.AGGCCTAG	homer_53.NWAACCACADNN	0.376808	0.202896	0.329707	0.219805	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_74.AGGCCTAG	homer_54.ACCATCTGTT	0.478983	0.136852	0.239491	0.191593	8	10	4	14	0.285714	0.500000	0.400000	R	-6	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_74.AGGCCTAG	homer_55.SVYTTCCNGGAARB	0.309995	0.177140	0.309995	0.177140	8	14	8	14	0.571429	1.000000	0.571429	D	-2	41
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_74.AGGCCTAG	homer_56.SCCTAGCAACAG	0.744430	0.319041	0.558322	0.372215	8	12	6	14	0.428571	0.750000	0.500000	D	2	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_74.AGGCCTAG	homer_57.AAACCACARM	0.227993	0.182394	0.227993	0.182394	8	10	8	10	0.800000	1.000000	0.800000	D	0	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_74.AGGCCTAG	homer_58.RTTATGYAAB	0.112022	0.089618	0.112022	0.089618	8	10	8	10	0.800000	1.000000	0.800000	R	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_74.AGGCCTAG	homer_59.NYTTCCWGGAAR	0.298454	0.198969	0.298454	0.198969	8	12	8	12	0.666667	1.000000	0.666667	D	-1	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_74.AGGCCTAG	homer_60.ASWTCCTGBT	0.340320	0.272256	0.340320	0.272256	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_74.AGGCCTAG	homer_61.DGGGYGKGGC	0.447981	0.358385	0.447981	0.358385	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_74.AGGCCTAG	homer_62.TWGTCTGV	0.445359	0.445359	0.445359	0.445359	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_74.AGGCCTAG	homer_63.CTGGCAGSCTGCCA	0.455955	0.260546	0.455955	0.260546	8	14	8	14	0.571429	1.000000	0.571429	D	-1	41
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_74.AGGCCTAG	homer_64.VGGGRATTYCCC	0.398323	0.214482	0.348533	0.232355	8	12	7	13	0.538462	0.875000	0.583333	R	-5	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_74.AGGCCTAG	homer_65.CARRGKBCAAAGTYCA	0.475889	0.237945	0.475889	0.237945	8	16	8	16	0.500000	1.000000	0.500000	R	-7	45
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_74.AGGCCTAG	homer_66.CCATTGTTNY	0.267333	0.133666	0.200499	0.160400	8	10	6	12	0.500000	0.750000	0.600000	D	2	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_74.AGGCCTAG	homer_67.CYAAAAATAG	0.703100	0.200886	0.351550	0.281240	8	10	4	14	0.285714	0.500000	0.400000	D	4	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_74.AGGCCTAG	homer_68.GGGGGGGG	0.369302	0.287235	0.323140	0.323140	8	8	7	9	0.777778	0.875000	0.875000	D	1	29
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_74.AGGCCTAG	homer_69.TTGAMCTTTG	0.504100	0.403280	0.504100	0.403280	8	10	8	10	0.800000	1.000000	0.800000	D	-1	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_74.AGGCCTAG	homer_70.MGGAAGTGAAAC	0.186176	0.124117	0.186176	0.124117	8	12	8	12	0.666667	1.000000	0.666667	D	0	37
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_74.AGGCCTAG	homer_71.HACTTCCGGY	0.222356	0.177885	0.222356	0.177885	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_74.AGGCCTAG	homer_72.NRYTTCCGGY	0.209806	0.167845	0.209806	0.167845	8	10	8	10	0.800000	1.000000	0.800000	R	-2	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_74.AGGCCTAG	homer_73.AWWNTGCTGAGTCAT	0.282786	0.150819	0.282786	0.150819	8	15	8	15	0.533333	1.000000	0.533333	R	0	43
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_74.AGGCCTAG	homer_74.AGGCCTAG	1.000000	1.000000	1.000000	1.000000	8	8	8	8	1.000000	1.000000	1.000000	D	0	29
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_74.AGGCCTAG	homer_75.VTTACGTAAYNNNNN	0.692342	0.103851	0.259628	0.138468	8	15	3	20	0.150000	0.375000	0.200000	R	5	43
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_74.AGGCCTAG	homer_76.TGCTGACTCA	0.226676	0.181341	0.226676	0.181341	8	10	8	10	0.800000	1.000000	0.800000	D	-2	33
hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_74.AGGCCTAG	homer_77.ATTGCGCAAC	0.140559	0.112447	0.140559	0.112447	8	10	8	10	0.800000	1.000000	0.800000	D	-2	33
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_75.VTTACGTAAYNNNNN	homer_1.ATTTCCTGTN	0.293475	0.195650	0.195650	0.293475	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_75.VTTACGTAAYNNNNN	homer_2.ACCGGAAGTG	0.325638	0.217092	0.217092	0.325638	15	10	10	15	0.666667	0.666667	1.000000	D	2	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_75.VTTACGTAAYNNNNN	homer_3.AACCGGAAGT	0.241734	0.161156	0.161156	0.241734	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_75.VTTACGTAAYNNNNN	homer_4.ACAGGAAGTG	0.222783	0.148522	0.148522	0.222783	15	10	10	15	0.666667	0.666667	1.000000	D	2	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_75.VTTACGTAAYNNNNN	homer_5.RACCGGAAGT	0.240131	0.160087	0.160087	0.240131	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_75.VTTACGTAAYNNNNN	homer_6.AGAGGAAGTG	0.279603	0.186402	0.186402	0.279603	15	10	10	15	0.666667	0.666667	1.000000	D	2	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_75.VTTACGTAAYNNNNN	homer_7.NNAYTTCCTGHN	0.235005	0.188004	0.188004	0.235005	15	12	12	15	0.800000	0.800000	1.000000	R	1	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_75.VTTACGTAAYNNNNN	homer_8.NRYTTCCGGH	0.339092	0.226061	0.226061	0.339092	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_75.VTTACGTAAYNNNNN	homer_9.MACAGGAAGT	0.404589	0.190395	0.215781	0.323671	15	10	8	17	0.470588	0.533333	0.800000	D	7	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_75.VTTACGTAAYNNNNN	homer_10.ACTTCCKGKT	0.302004	0.201336	0.201336	0.302004	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_75.VTTACGTAAYNNNNN	homer_11.ACVAGGAAGT	0.256703	0.171135	0.171135	0.256703	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_75.VTTACGTAAYNNNNN	homer_12.YCTTATCTBN	0.416792	0.277862	0.277862	0.416792	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_75.VTTACGTAAYNNNNN	homer_13.NBWGATAAGR	0.427909	0.285273	0.285273	0.427909	15	10	10	15	0.666667	0.666667	1.000000	R	4	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_75.VTTACGTAAYNNNNN	homer_14.TGGCAGTTGG	0.522437	0.348292	0.348292	0.522437	15	10	10	15	0.666667	0.666667	1.000000	R	5	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_75.VTTACGTAAYNNNNN	homer_15.AVCCGGAAGT	0.280354	0.186903	0.186903	0.280354	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_75.VTTACGTAAYNNNNN	homer_16.ANCAGGAAGT	0.236481	0.157654	0.157654	0.236481	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_75.VTTACGTAAYNNNNN	homer_17.SAGATAAGRV	0.476080	0.317387	0.317387	0.476080	15	10	10	15	0.666667	0.666667	1.000000	D	2	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_75.VTTACGTAAYNNNNN	homer_18.TGCTGAGTCA	0.417803	0.278535	0.278535	0.417803	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_75.VTTACGTAAYNNNNN	homer_19.GCTATTTTTAGC	0.292380	0.233904	0.233904	0.292380	15	12	12	15	0.800000	0.800000	1.000000	R	2	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_75.VTTACGTAAYNNNNN	homer_20.GGCVGTTR	0.637291	0.339889	0.339889	0.637291	15	8	8	15	0.533333	0.533333	1.000000	R	6	43
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_75.VTTACGTAAYNNNNN	homer_21.CYTGGCABNSTGCCAR	0.154267	0.144625	0.154267	0.144625	15	16	15	16	0.937500	1.000000	0.937500	R	0	59
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_75.VTTACGTAAYNNNNN	homer_22.BBCTTATCTS	0.488815	0.325877	0.325877	0.488815	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_75.VTTACGTAAYNNNNN	homer_23.VACAGGAAAT	0.213637	0.142425	0.142425	0.213637	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_75.VTTACGTAAYNNNNN	homer_24.RGKGGGCGKGGC	0.191178	0.112457	0.127452	0.159315	15	12	10	17	0.588235	0.666667	0.833333	R	5	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_75.VTTACGTAAYNNNNN	homer_25.AGATAASR	0.530979	0.283189	0.283189	0.530979	15	8	8	15	0.533333	0.533333	1.000000	D	3	43
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_75.VTTACGTAAYNNNNN	homer_26.YGGCCCCGCCCC	0.052945	0.042356	0.042356	0.052945	15	12	12	15	0.800000	0.800000	1.000000	D	1	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_75.VTTACGTAAYNNNNN	homer_27.AVCAGGAAGT	0.305458	0.203639	0.203639	0.305458	15	10	10	15	0.666667	0.666667	1.000000	D	1	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_75.VTTACGTAAYNNNNN	homer_28.RGKGGGCGGAGC	0.438937	0.076337	0.117050	0.146312	15	12	4	23	0.173913	0.266667	0.333333	R	11	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_75.VTTACGTAAYNNNNN	homer_29.AWWWTGCTGAGTCAT	0.349637	0.349637	0.349637	0.349637	15	15	15	15	1.000000	1.000000	1.000000	R	0	57
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_75.VTTACGTAAYNNNNN	homer_30.CAAAGGTCAG	0.224458	0.149639	0.149639	0.224458	15	10	10	15	0.666667	0.666667	1.000000	R	5	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_75.VTTACGTAAYNNNNN	homer_31.VTGACTCATC	0.396515	0.264343	0.264343	0.396515	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_75.VTTACGTAAYNNNNN	homer_32.AAAGRGGAAGTG	0.279697	0.223757	0.223757	0.279697	15	12	12	15	0.800000	0.800000	1.000000	D	0	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_75.VTTACGTAAYNNNNN	homer_33.GRAASTGAAAST	0.437175	0.257162	0.291450	0.364312	15	12	10	17	0.588235	0.666667	0.833333	D	5	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_75.VTTACGTAAYNNNNN	homer_34.CCCCTCCCCCAC	0.133305	0.106644	0.106644	0.133305	15	12	12	15	0.800000	0.800000	1.000000	R	0	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_75.VTTACGTAAYNNNNN	homer_35.GAAAGTGAAAGT	0.424223	0.249543	0.282815	0.353519	15	12	10	17	0.588235	0.666667	0.833333	D	5	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_75.VTTACGTAAYNNNNN	homer_36.DATGASTCATHN	0.374257	0.299406	0.299406	0.374257	15	12	12	15	0.800000	0.800000	1.000000	D	0	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_75.VTTACGTAAYNNNNN	homer_37.NDATGASTCAYN	0.426230	0.340984	0.340984	0.426230	15	12	12	15	0.800000	0.800000	1.000000	R	0	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_75.VTTACGTAAYNNNNN	homer_38.RATGASTCAT	0.405844	0.270563	0.270563	0.405844	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_75.VTTACGTAAYNNNNN	homer_39.DATGASTCAT	0.400675	0.267117	0.267117	0.400675	15	10	10	15	0.666667	0.666667	1.000000	R	1	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_75.VTTACGTAAYNNNNN	homer_40.AGTTTCAKTTTC	0.451610	0.265653	0.301073	0.376342	15	12	10	17	0.588235	0.666667	0.833333	R	5	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_75.VTTACGTAAYNNNNN	homer_41.NNATGASTCATH	0.421277	0.337022	0.337022	0.421277	15	12	12	15	0.800000	0.800000	1.000000	R	0	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_75.VTTACGTAAYNNNNN	homer_42.SAAACCACAG	0.430459	0.286973	0.286973	0.430459	15	10	10	15	0.666667	0.666667	1.000000	D	5	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_75.VTTACGTAAYNNNNN	homer_43.GAAASYGAAASY	0.437090	0.257112	0.291393	0.364241	15	12	10	17	0.588235	0.666667	0.833333	D	5	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_75.VTTACGTAAYNNNNN	homer_44.AVCAGCTG	0.367079	0.195775	0.195775	0.367079	15	8	8	15	0.533333	0.533333	1.000000	R	7	43
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_75.VTTACGTAAYNNNNN	homer_45.SGTCACGTGR	0.376018	0.250679	0.250679	0.376018	15	10	10	15	0.666667	0.666667	1.000000	D	4	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_75.VTTACGTAAYNNNNN	homer_46.NATGASTCABNN	0.417035	0.333628	0.333628	0.417035	15	12	12	15	0.800000	0.800000	1.000000	D	0	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_75.VTTACGTAAYNNNNN	homer_47.GATGASTCATCN	0.369546	0.295637	0.295637	0.369546	15	12	12	15	0.800000	0.800000	1.000000	D	0	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_75.VTTACGTAAYNNNNN	homer_48.AGTTTCASTTTC	0.439352	0.258443	0.292902	0.366127	15	12	10	17	0.588235	0.666667	0.833333	R	5	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_75.VTTACGTAAYNNNNN	homer_49.RCAGGATGTGGT	0.320173	0.188337	0.213448	0.266810	15	12	10	17	0.588235	0.666667	0.833333	R	5	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_75.VTTACGTAAYNNNNN	homer_50.GGGGGAATCCCC	0.214522	0.171618	0.171618	0.214522	15	12	12	15	0.800000	0.800000	1.000000	D	2	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_75.VTTACGTAAYNNNNN	homer_51.GCTGTGGTTW	0.449783	0.253003	0.269870	0.404805	15	10	9	16	0.562500	0.600000	0.900000	R	6	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_75.VTTACGTAAYNNNNN	homer_52.GGATGACTCATC	0.385872	0.308697	0.308697	0.385872	15	12	12	15	0.800000	0.800000	1.000000	R	0	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_75.VTTACGTAAYNNNNN	homer_53.NWAACCACADNN	0.318696	0.254957	0.254957	0.318696	15	12	12	15	0.800000	0.800000	1.000000	D	2	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_75.VTTACGTAAYNNNNN	homer_54.ACCATCTGTT	0.352669	0.235112	0.235112	0.352669	15	10	10	15	0.666667	0.666667	1.000000	D	5	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_75.VTTACGTAAYNNNNN	homer_55.SVYTTCCNGGAARB	0.309154	0.251188	0.267934	0.287072	15	14	13	16	0.812500	0.866667	0.928571	R	-1	55
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_75.VTTACGTAAYNNNNN	homer_56.SCCTAGCAACAG	0.280369	0.224295	0.224295	0.280369	15	12	12	15	0.800000	0.800000	1.000000	D	0	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_75.VTTACGTAAYNNNNN	homer_57.AAACCACARM	0.449663	0.252935	0.269798	0.404697	15	10	9	16	0.562500	0.600000	0.900000	D	6	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_75.VTTACGTAAYNNNNN	homer_58.RTTATGYAAB	0.919987	0.613325	0.613325	0.919987	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_75.VTTACGTAAYNNNNN	homer_59.NYTTCCWGGAAR	0.302248	0.241799	0.241799	0.302248	15	12	12	15	0.800000	0.800000	1.000000	R	0	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_75.VTTACGTAAYNNNNN	homer_60.ASWTCCTGBT	0.275799	0.107255	0.128706	0.193059	15	10	7	18	0.388889	0.466667	0.700000	D	8	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_75.VTTACGTAAYNNNNN	homer_61.DGGGYGKGGC	0.232439	0.154960	0.154960	0.232439	15	10	10	15	0.666667	0.666667	1.000000	R	5	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_75.VTTACGTAAYNNNNN	homer_62.TWGTCTGV	0.324809	0.173231	0.173231	0.324809	15	8	8	15	0.533333	0.533333	1.000000	R	6	43
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_75.VTTACGTAAYNNNNN	homer_63.CTGGCAGSCTGCCA	0.189073	0.115545	0.138654	0.148557	15	14	11	18	0.611111	0.733333	0.785714	R	4	55
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_75.VTTACGTAAYNNNNN	homer_64.VGGGRATTYCCC	0.201439	0.161151	0.161151	0.201439	15	12	12	15	0.800000	0.800000	1.000000	R	3	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_75.VTTACGTAAYNNNNN	homer_65.CARRGKBCAAAGTYCA	0.184312	0.172792	0.184312	0.172792	15	16	15	16	0.937500	1.000000	0.937500	D	0	59
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_75.VTTACGTAAYNNNNN	homer_66.CCATTGTTNY	0.478228	0.318818	0.318818	0.478228	15	10	10	15	0.666667	0.666667	1.000000	R	5	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_75.VTTACGTAAYNNNNN	homer_67.CYAAAAATAG	0.258844	0.172563	0.172563	0.258844	15	10	10	15	0.666667	0.666667	1.000000	D	3	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_75.VTTACGTAAYNNNNN	homer_68.GGGGGGGG	0.262011	0.092475	0.104805	0.196508	15	8	6	17	0.352941	0.400000	0.750000	R	9	43
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_75.VTTACGTAAYNNNNN	homer_69.TTGAMCTTTG	0.283241	0.188827	0.188827	0.283241	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_75.VTTACGTAAYNNNNN	homer_70.MGGAAGTGAAAC	0.388909	0.267375	0.285200	0.356500	15	12	11	16	0.687500	0.733333	0.916667	D	4	51
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_75.VTTACGTAAYNNNNN	homer_71.HACTTCCGGY	0.390488	0.260325	0.260325	0.390488	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_75.VTTACGTAAYNNNNN	homer_72.NRYTTCCGGY	0.359767	0.239845	0.239845	0.359767	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_75.VTTACGTAAYNNNNN	homer_73.AWWNTGCTGAGTCAT	0.337469	0.337469	0.337469	0.337469	15	15	15	15	1.000000	1.000000	1.000000	R	0	57
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_75.VTTACGTAAYNNNNN	homer_74.AGGCCTAG	0.692342	0.103851	0.138468	0.259628	15	8	3	20	0.150000	0.200000	0.375000	R	12	43
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_75.VTTACGTAAYNNNNN	homer_75.VTTACGTAAYNNNNN	1.000000	1.000000	1.000000	1.000000	15	15	15	15	1.000000	1.000000	1.000000	D	0	57
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_75.VTTACGTAAYNNNNN	homer_76.TGCTGACTCA	0.433791	0.289194	0.289194	0.433791	15	10	10	15	0.666667	0.666667	1.000000	R	2	47
hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_75.VTTACGTAAYNNNNN	homer_77.ATTGCGCAAC	0.803364	0.535576	0.535576	0.803364	15	10	10	15	0.666667	0.666667	1.000000	R	0	47
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_76.TGCTGACTCA	homer_1.ATTTCCTGTN	0.575271	0.309761	0.402689	0.402689	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_76.TGCTGACTCA	homer_2.ACCGGAAGTG	0.275534	0.275534	0.275534	0.275534	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_76.TGCTGACTCA	homer_3.AACCGGAAGT	0.248885	0.203633	0.223996	0.223996	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_76.TGCTGACTCA	homer_4.ACAGGAAGTG	0.242059	0.242059	0.242059	0.242059	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_76.TGCTGACTCA	homer_5.RACCGGAAGT	0.399945	0.215355	0.279961	0.279961	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_76.TGCTGACTCA	homer_6.AGAGGAAGTG	0.286024	0.286024	0.286024	0.286024	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_76.TGCTGACTCA	homer_7.NNAYTTCCTGHN	0.469380	0.219044	0.328566	0.273805	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_76.TGCTGACTCA	homer_8.NRYTTCCGGH	0.312601	0.312601	0.312601	0.312601	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_76.TGCTGACTCA	homer_9.MACAGGAAGT	0.510174	0.274709	0.357122	0.357122	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_76.TGCTGACTCA	homer_10.ACTTCCKGKT	0.325312	0.266164	0.292780	0.292780	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_76.TGCTGACTCA	homer_11.ACVAGGAAGT	0.331211	0.270991	0.298090	0.298090	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_76.TGCTGACTCA	homer_12.YCTTATCTBN	0.358204	0.238803	0.286563	0.286563	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_76.TGCTGACTCA	homer_13.NBWGATAAGR	0.406729	0.271153	0.325383	0.325383	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_76.TGCTGACTCA	homer_14.TGGCAGTTGG	0.379232	0.252822	0.303386	0.303386	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_76.TGCTGACTCA	homer_15.AVCCGGAAGT	0.282014	0.230738	0.253812	0.253812	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_76.TGCTGACTCA	homer_16.ANCAGGAAGT	0.321020	0.262653	0.288918	0.288918	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_76.TGCTGACTCA	homer_17.SAGATAAGRV	0.348844	0.285418	0.313960	0.313960	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_76.TGCTGACTCA	homer_18.TGCTGAGTCA	0.888266	0.888266	0.888266	0.888266	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_76.TGCTGACTCA	homer_19.GCTATTTTTAGC	0.228641	0.158290	0.205777	0.171480	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_76.TGCTGACTCA	homer_20.GGCVGTTR	0.350894	0.223296	0.245626	0.307032	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_76.TGCTGACTCA	homer_21.CYTGGCABNSTGCCAR	0.469507	0.248563	0.422556	0.264098	10	16	9	17	0.529412	0.900000	0.562500	D	1	49
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_76.TGCTGACTCA	homer_22.BBCTTATCTS	0.348912	0.285474	0.314021	0.314021	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_76.TGCTGACTCA	homer_23.VACAGGAAAT	0.551276	0.296841	0.385893	0.385893	10	10	7	13	0.538462	0.700000	0.700000	R	-3	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_76.TGCTGACTCA	homer_24.RGKGGGCGKGGC	0.275452	0.157401	0.220362	0.183635	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_76.TGCTGACTCA	homer_25.AGATAASR	0.379732	0.303785	0.303785	0.379732	10	8	8	10	0.800000	0.800000	1.000000	D	0	33
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_76.TGCTGACTCA	homer_26.YGGCCCCGCCCC	0.299877	0.249898	0.299877	0.249898	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_76.TGCTGACTCA	homer_27.AVCAGGAAGT	0.299012	0.244646	0.269111	0.269111	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_76.TGCTGACTCA	homer_28.RGKGGGCGGAGC	0.410292	0.234452	0.328233	0.273528	10	12	8	14	0.571429	0.800000	0.666667	D	-4	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_76.TGCTGACTCA	homer_29.AWWWTGCTGAGTCAT	0.847262	0.564841	0.847262	0.564841	10	15	10	15	0.666667	1.000000	0.666667	D	-4	47
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_76.TGCTGACTCA	homer_30.CAAAGGTCAG	0.557030	0.371353	0.445624	0.445624	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_76.TGCTGACTCA	homer_31.VTGACTCATC	0.763447	0.624639	0.687103	0.687103	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_76.TGCTGACTCA	homer_32.AAAGRGGAAGTG	0.228082	0.190069	0.228082	0.190069	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_76.TGCTGACTCA	homer_33.GRAASTGAAAST	0.215253	0.179377	0.215253	0.179377	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_76.TGCTGACTCA	homer_34.CCCCTCCCCCAC	0.232830	0.194025	0.232830	0.194025	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_76.TGCTGACTCA	homer_35.GAAAGTGAAAGT	0.230825	0.192354	0.230825	0.192354	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_76.TGCTGACTCA	homer_36.DATGASTCATHN	0.712203	0.593502	0.712203	0.593502	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_76.TGCTGACTCA	homer_37.NDATGASTCAYN	0.679171	0.565976	0.679171	0.565976	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_76.TGCTGACTCA	homer_38.RATGASTCAT	0.764662	0.625632	0.688196	0.688196	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_76.TGCTGACTCA	homer_39.DATGASTCAT	0.738198	0.603980	0.664378	0.664378	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_76.TGCTGACTCA	homer_40.AGTTTCAKTTTC	0.193758	0.161465	0.193758	0.161465	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_76.TGCTGACTCA	homer_41.NNATGASTCATH	0.686418	0.572015	0.686418	0.572015	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_76.TGCTGACTCA	homer_42.SAAACCACAG	0.330652	0.270534	0.297587	0.297587	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_76.TGCTGACTCA	homer_43.GAAASYGAAASY	0.215202	0.148986	0.193682	0.161402	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_76.TGCTGACTCA	homer_44.AVCAGCTG	0.618815	0.393791	0.433170	0.541463	10	8	7	11	0.636364	0.700000	0.875000	R	-1	33
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_76.TGCTGACTCA	homer_45.SGTCACGTGR	0.284485	0.189657	0.227588	0.227588	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_76.TGCTGACTCA	homer_46.NATGASTCABNN	0.723113	0.602594	0.723113	0.602594	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_76.TGCTGACTCA	homer_47.GATGASTCATCN	0.724797	0.603998	0.724797	0.603998	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_76.TGCTGACTCA	homer_48.AGTTTCASTTTC	0.264449	0.220374	0.264449	0.220374	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_76.TGCTGACTCA	homer_49.RCAGGATGTGGT	0.511668	0.191875	0.307001	0.255834	10	12	6	16	0.375000	0.600000	0.500000	R	-6	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_76.TGCTGACTCA	homer_50.GGGGGAATCCCC	0.327317	0.226604	0.294585	0.245487	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_76.TGCTGACTCA	homer_51.GCTGTGGTTW	0.297414	0.243339	0.267673	0.267673	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_76.TGCTGACTCA	homer_52.GGATGACTCATC	0.731137	0.609281	0.731137	0.609281	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_76.TGCTGACTCA	homer_53.NWAACCACADNN	0.304581	0.210863	0.274123	0.228435	10	12	9	13	0.692308	0.900000	0.750000	R	-3	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_76.TGCTGACTCA	homer_54.ACCATCTGTT	0.232907	0.232907	0.232907	0.232907	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_76.TGCTGACTCA	homer_55.SVYTTCCNGGAARB	0.239442	0.171030	0.239442	0.171030	10	14	10	14	0.714286	1.000000	0.714286	D	0	45
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_76.TGCTGACTCA	homer_56.SCCTAGCAACAG	0.483839	0.276479	0.387071	0.322559	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_76.TGCTGACTCA	homer_57.AAACCACARM	0.293992	0.195994	0.235193	0.235193	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_76.TGCTGACTCA	homer_58.RTTATGYAAB	0.370809	0.247206	0.296647	0.296647	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_76.TGCTGACTCA	homer_59.NYTTCCWGGAAR	0.176694	0.147245	0.176694	0.147245	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_76.TGCTGACTCA	homer_60.ASWTCCTGBT	0.444592	0.239396	0.311215	0.311215	10	10	7	13	0.538462	0.700000	0.700000	D	-3	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_76.TGCTGACTCA	homer_61.DGGGYGKGGC	0.539306	0.231131	0.323584	0.323584	10	10	6	14	0.428571	0.600000	0.600000	R	4	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_76.TGCTGACTCA	homer_62.TWGTCTGV	0.504136	0.403309	0.403309	0.504136	10	8	8	10	0.800000	0.800000	1.000000	R	1	33
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_76.TGCTGACTCA	homer_63.CTGGCAGSCTGCCA	0.557531	0.278766	0.446025	0.318589	10	14	8	16	0.500000	0.800000	0.571429	D	2	45
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_76.TGCTGACTCA	homer_64.VGGGRATTYCCC	0.202428	0.140142	0.182185	0.151821	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_76.TGCTGACTCA	homer_65.CARRGKBCAAAGTYCA	0.245821	0.153638	0.245821	0.153638	10	16	10	16	0.625000	1.000000	0.625000	D	-5	49
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_76.TGCTGACTCA	homer_66.CCATTGTTNY	0.205447	0.168093	0.184902	0.184902	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_76.TGCTGACTCA	homer_67.CYAAAAATAG	0.710786	0.177696	0.284314	0.284314	10	10	4	16	0.250000	0.400000	0.400000	D	6	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_76.TGCTGACTCA	homer_68.GGGGGGGG	0.349787	0.099939	0.139915	0.174894	10	8	4	14	0.285714	0.400000	0.500000	R	6	33
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_76.TGCTGACTCA	homer_69.TTGAMCTTTG	0.512106	0.341404	0.409685	0.409685	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_76.TGCTGACTCA	homer_70.MGGAAGTGAAAC	0.264158	0.182879	0.237742	0.198119	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_76.TGCTGACTCA	homer_71.HACTTCCGGY	0.305776	0.305776	0.305776	0.305776	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_76.TGCTGACTCA	homer_72.NRYTTCCGGY	0.328203	0.328203	0.328203	0.328203	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_76.TGCTGACTCA	homer_73.AWWNTGCTGAGTCAT	0.891896	0.594598	0.891896	0.594598	10	15	10	15	0.666667	1.000000	0.666667	D	-4	47
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_76.TGCTGACTCA	homer_74.AGGCCTAG	0.226676	0.181341	0.181341	0.226676	10	8	8	10	0.800000	0.800000	1.000000	D	2	33
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_76.TGCTGACTCA	homer_75.VTTACGTAAYNNNNN	0.433791	0.289194	0.433791	0.289194	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_76.TGCTGACTCA	homer_76.TGCTGACTCA	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_76.TGCTGACTCA	homer_77.ATTGCGCAAC	0.413728	0.275818	0.330982	0.330982	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m1_homer_1.ATTTCCTGTN	homer_77.ATTGCGCAAC	homer_1.ATTTCCTGTN	0.281112	0.281112	0.281112	0.281112	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m2_homer_2.ACCGGAAGTG	homer_77.ATTGCGCAAC	homer_2.ACCGGAAGTG	0.376065	0.250710	0.300852	0.300852	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m3_homer_3.AACCGGAAGT	homer_77.ATTGCGCAAC	homer_3.AACCGGAAGT	0.302072	0.247150	0.271865	0.271865	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m4_homer_4.ACAGGAAGTG	homer_77.ATTGCGCAAC	homer_4.ACAGGAAGTG	0.272180	0.181453	0.217744	0.217744	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m5_homer_5.RACCGGAAGT	homer_77.ATTGCGCAAC	homer_5.RACCGGAAGT	0.299667	0.245182	0.269700	0.269700	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m6_homer_6.AGAGGAAGTG	homer_77.ATTGCGCAAC	homer_6.AGAGGAAGTG	0.410311	0.273541	0.328249	0.328249	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m7_homer_7.NNAYTTCCTGHN	homer_77.ATTGCGCAAC	homer_7.NNAYTTCCTGHN	0.302856	0.209670	0.272571	0.227142	10	12	9	13	0.692308	0.900000	0.750000	R	1	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m8_homer_8.NRYTTCCGGH	homer_77.ATTGCGCAAC	homer_8.NRYTTCCGGH	0.389508	0.259672	0.311606	0.311606	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m9_homer_9.MACAGGAAGT	homer_77.ATTGCGCAAC	homer_9.MACAGGAAGT	0.841984	0.148585	0.252595	0.252595	10	10	3	17	0.176471	0.300000	0.300000	D	7	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m10_homer_10.ACTTCCKGKT	homer_77.ATTGCGCAAC	homer_10.ACTTCCKGKT	0.370191	0.302883	0.333172	0.333172	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m11_homer_11.ACVAGGAAGT	homer_77.ATTGCGCAAC	homer_11.ACVAGGAAGT	0.327646	0.268074	0.294881	0.294881	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m12_homer_12.YCTTATCTBN	homer_77.ATTGCGCAAC	homer_12.YCTTATCTBN	0.358433	0.153614	0.215060	0.215060	10	10	6	14	0.428571	0.600000	0.600000	D	-4	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m13_homer_13.NBWGATAAGR	homer_77.ATTGCGCAAC	homer_13.NBWGATAAGR	0.390781	0.167477	0.234468	0.234468	10	10	6	14	0.428571	0.600000	0.600000	R	-4	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m14_homer_14.TGGCAGTTGG	homer_77.ATTGCGCAAC	homer_14.TGGCAGTTGG	0.859854	0.286618	0.429927	0.429927	10	10	5	15	0.333333	0.500000	0.500000	R	5	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m15_homer_15.AVCCGGAAGT	homer_77.ATTGCGCAAC	homer_15.AVCCGGAAGT	0.339200	0.277527	0.305280	0.305280	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m16_homer_16.ANCAGGAAGT	homer_77.ATTGCGCAAC	homer_16.ANCAGGAAGT	0.281020	0.229925	0.252918	0.252918	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m17_homer_17.SAGATAAGRV	homer_77.ATTGCGCAAC	homer_17.SAGATAAGRV	0.239033	0.159355	0.191226	0.191226	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m18_homer_18.TGCTGAGTCA	homer_77.ATTGCGCAAC	homer_18.TGCTGAGTCA	0.347292	0.284148	0.312563	0.312563	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m19_homer_19.GCTATTTTTAGC	homer_77.ATTGCGCAAC	homer_19.GCTATTTTTAGC	0.277433	0.192069	0.249689	0.208074	10	12	9	13	0.692308	0.900000	0.750000	D	-3	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m20_homer_20.GGCVGTTR	homer_77.ATTGCGCAAC	homer_20.GGCVGTTR	0.914404	0.261258	0.365762	0.457202	10	8	4	14	0.285714	0.400000	0.500000	R	6	33
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m21_homer_21.CYTGGCABNSTGCCAR	homer_77.ATTGCGCAAC	homer_21.CYTGGCABNSTGCCAR	0.323621	0.202263	0.323621	0.202263	10	16	10	16	0.625000	1.000000	0.625000	D	-6	49
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m22_homer_22.BBCTTATCTS	homer_77.ATTGCGCAAC	homer_22.BBCTTATCTS	0.241885	0.161257	0.193508	0.193508	10	10	8	12	0.666667	0.800000	0.800000	D	2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m23_homer_23.VACAGGAAAT	homer_77.ATTGCGCAAC	homer_23.VACAGGAAAT	0.203632	0.203632	0.203632	0.203632	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m24_homer_24.RGKGGGCGKGGC	homer_77.ATTGCGCAAC	homer_24.RGKGGGCGKGGC	0.456295	0.134204	0.228147	0.190123	10	12	5	17	0.294118	0.500000	0.416667	R	5	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m25_homer_25.AGATAASR	homer_77.ATTGCGCAAC	homer_25.AGATAASR	0.467093	0.233546	0.280256	0.350320	10	8	6	12	0.500000	0.600000	0.750000	D	-2	33
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m26_homer_26.YGGCCCCGCCCC	homer_77.ATTGCGCAAC	homer_26.YGGCCCCGCCCC	0.242263	0.167720	0.218036	0.181697	10	12	9	13	0.692308	0.900000	0.750000	D	1	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m27_homer_27.AVCAGGAAGT	homer_77.ATTGCGCAAC	homer_27.AVCAGGAAGT	0.344024	0.281474	0.309622	0.309622	10	10	9	11	0.818182	0.900000	0.900000	D	1	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m28_homer_28.RGKGGGCGGAGC	homer_77.ATTGCGCAAC	homer_28.RGKGGGCGGAGC	0.320410	0.149525	0.224287	0.186906	10	12	7	15	0.466667	0.700000	0.583333	R	3	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m29_homer_29.AWWWTGCTGAGTCAT	homer_77.ATTGCGCAAC	homer_29.AWWWTGCTGAGTCAT	0.444106	0.296071	0.444106	0.296071	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m30_homer_30.CAAAGGTCAG	homer_77.ATTGCGCAAC	homer_30.CAAAGGTCAG	0.287555	0.235272	0.258799	0.258799	10	10	9	11	0.818182	0.900000	0.900000	D	-1	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m31_homer_31.VTGACTCATC	homer_77.ATTGCGCAAC	homer_31.VTGACTCATC	0.346835	0.346835	0.346835	0.346835	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m32_homer_32.AAAGRGGAAGTG	homer_77.ATTGCGCAAC	homer_32.AAAGRGGAAGTG	0.435353	0.362794	0.435353	0.362794	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m33_homer_33.GRAASTGAAAST	homer_77.ATTGCGCAAC	homer_33.GRAASTGAAAST	0.337521	0.281268	0.337521	0.281268	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m34_homer_34.CCCCTCCCCCAC	homer_77.ATTGCGCAAC	homer_34.CCCCTCCCCCAC	0.246113	0.205094	0.246113	0.205094	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m35_homer_35.GAAAGTGAAAGT	homer_77.ATTGCGCAAC	homer_35.GAAAGTGAAAGT	0.378411	0.315342	0.378411	0.315342	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m36_homer_36.DATGASTCATHN	homer_77.ATTGCGCAAC	homer_36.DATGASTCATHN	0.327521	0.272934	0.327521	0.272934	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m37_homer_37.NDATGASTCAYN	homer_77.ATTGCGCAAC	homer_37.NDATGASTCAYN	0.387212	0.322676	0.387212	0.322676	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m38_homer_38.RATGASTCAT	homer_77.ATTGCGCAAC	homer_38.RATGASTCAT	0.357899	0.357899	0.357899	0.357899	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m39_homer_39.DATGASTCAT	homer_77.ATTGCGCAAC	homer_39.DATGASTCAT	0.350621	0.350621	0.350621	0.350621	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m40_homer_40.AGTTTCAKTTTC	homer_77.ATTGCGCAAC	homer_40.AGTTTCAKTTTC	0.349368	0.291140	0.349368	0.291140	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m41_homer_41.NNATGASTCATH	homer_77.ATTGCGCAAC	homer_41.NNATGASTCATH	0.374754	0.312295	0.374754	0.312295	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m42_homer_42.SAAACCACAG	homer_77.ATTGCGCAAC	homer_42.SAAACCACAG	0.734756	0.244919	0.367378	0.367378	10	10	5	15	0.333333	0.500000	0.500000	D	5	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m43_homer_43.GAAASYGAAASY	homer_77.ATTGCGCAAC	homer_43.GAAASYGAAASY	0.408598	0.340499	0.408598	0.340499	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m44_homer_44.AVCAGCTG	homer_77.ATTGCGCAAC	homer_44.AVCAGCTG	0.447821	0.223910	0.268692	0.335866	10	8	6	12	0.500000	0.600000	0.750000	D	4	33
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m45_homer_45.SGTCACGTGR	homer_77.ATTGCGCAAC	homer_45.SGTCACGTGR	0.465163	0.199355	0.279098	0.279098	10	10	6	14	0.428571	0.600000	0.600000	D	4	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m46_homer_46.NATGASTCABNN	homer_77.ATTGCGCAAC	homer_46.NATGASTCABNN	0.377818	0.314848	0.377818	0.314848	10	12	10	12	0.833333	1.000000	0.833333	R	-2	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m47_homer_47.GATGASTCATCN	homer_77.ATTGCGCAAC	homer_47.GATGASTCATCN	0.333834	0.278195	0.333834	0.278195	10	12	10	12	0.833333	1.000000	0.833333	D	-1	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m48_homer_48.AGTTTCASTTTC	homer_77.ATTGCGCAAC	homer_48.AGTTTCASTTTC	0.408545	0.340454	0.408545	0.340454	10	12	10	12	0.833333	1.000000	0.833333	R	-1	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m49_homer_49.RCAGGATGTGGT	homer_77.ATTGCGCAAC	homer_49.RCAGGATGTGGT	0.542363	0.159519	0.271182	0.225985	10	12	5	17	0.294118	0.500000	0.416667	R	5	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m50_homer_50.GGGGGAATCCCC	homer_77.ATTGCGCAAC	homer_50.GGGGGAATCCCC	0.428605	0.244917	0.342884	0.285737	10	12	8	14	0.571429	0.800000	0.666667	R	-4	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m51_homer_51.GCTGTGGTTW	homer_77.ATTGCGCAAC	homer_51.GCTGTGGTTW	0.218611	0.218611	0.218611	0.218611	10	10	10	10	1.000000	1.000000	1.000000	R	0	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m52_homer_52.GGATGACTCATC	homer_77.ATTGCGCAAC	homer_52.GGATGACTCATC	0.362014	0.301679	0.362014	0.301679	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m53_homer_53.NWAACCACADNN	homer_77.ATTGCGCAAC	homer_53.NWAACCACADNN	0.675465	0.198666	0.337732	0.281444	10	12	5	17	0.294118	0.500000	0.416667	D	5	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m54_homer_54.ACCATCTGTT	homer_77.ATTGCGCAAC	homer_54.ACCATCTGTT	0.567301	0.189100	0.283650	0.283650	10	10	5	15	0.333333	0.500000	0.500000	R	-5	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m55_homer_55.SVYTTCCNGGAARB	homer_77.ATTGCGCAAC	homer_55.SVYTTCCNGGAARB	0.275781	0.196986	0.275781	0.196986	10	14	10	14	0.714286	1.000000	0.714286	R	-2	45
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m56_homer_56.SCCTAGCAACAG	homer_77.ATTGCGCAAC	homer_56.SCCTAGCAACAG	0.400285	0.333571	0.400285	0.333571	10	12	10	12	0.833333	1.000000	0.833333	D	0	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m57_homer_57.AAACCACARM	homer_77.ATTGCGCAAC	homer_57.AAACCACARM	0.246170	0.246170	0.246170	0.246170	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m58_homer_58.RTTATGYAAB	homer_77.ATTGCGCAAC	homer_58.RTTATGYAAB	0.761457	0.761457	0.761457	0.761457	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m59_homer_59.NYTTCCWGGAAR	homer_77.ATTGCGCAAC	homer_59.NYTTCCWGGAAR	0.275330	0.229441	0.275330	0.229441	10	12	10	12	0.833333	1.000000	0.833333	D	-2	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m60_homer_60.ASWTCCTGBT	homer_77.ATTGCGCAAC	homer_60.ASWTCCTGBT	0.181004	0.148094	0.162904	0.162904	10	10	9	11	0.818182	0.900000	0.900000	R	1	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m61_homer_61.DGGGYGKGGC	homer_77.ATTGCGCAAC	homer_61.DGGGYGKGGC	0.324902	0.174947	0.227432	0.227432	10	10	7	13	0.538462	0.700000	0.700000	R	3	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m62_homer_62.TWGTCTGV	homer_77.ATTGCGCAAC	homer_62.TWGTCTGV	0.205962	0.164769	0.164769	0.205962	10	8	8	10	0.800000	0.800000	1.000000	D	1	33
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m63_homer_63.CTGGCAGSCTGCCA	homer_77.ATTGCGCAAC	homer_63.CTGGCAGSCTGCCA	0.226524	0.161803	0.226524	0.161803	10	14	10	14	0.714286	1.000000	0.714286	R	-4	45
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m64_homer_64.VGGGRATTYCCC	homer_77.ATTGCGCAAC	homer_64.VGGGRATTYCCC	0.444804	0.207575	0.311363	0.259469	10	12	7	15	0.466667	0.700000	0.583333	D	-5	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m65_homer_65.CARRGKBCAAAGTYCA	homer_77.ATTGCGCAAC	homer_65.CARRGKBCAAAGTYCA	0.439814	0.274884	0.439814	0.274884	10	16	10	16	0.625000	1.000000	0.625000	D	-1	49
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m66_homer_66.CCATTGTTNY	homer_77.ATTGCGCAAC	homer_66.CCATTGTTNY	0.593930	0.395954	0.475144	0.475144	10	10	8	12	0.666667	0.800000	0.800000	D	-2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m67_homer_67.CYAAAAATAG	homer_77.ATTGCGCAAC	homer_67.CYAAAAATAG	0.382894	0.255263	0.306316	0.306316	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m68_homer_68.GGGGGGGG	homer_77.ATTGCGCAAC	homer_68.GGGGGGGG	0.165713	0.082857	0.099428	0.124285	10	8	6	12	0.500000	0.600000	0.750000	R	4	33
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m69_homer_69.TTGAMCTTTG	homer_77.ATTGCGCAAC	homer_69.TTGAMCTTTG	0.373739	0.305786	0.336365	0.336365	10	10	9	11	0.818182	0.900000	0.900000	R	-1	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m70_homer_70.MGGAAGTGAAAC	homer_77.ATTGCGCAAC	homer_70.MGGAAGTGAAAC	0.260628	0.217190	0.260628	0.217190	10	12	10	12	0.833333	1.000000	0.833333	R	0	41
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m71_homer_71.HACTTCCGGY	homer_77.ATTGCGCAAC	homer_71.HACTTCCGGY	0.431617	0.287745	0.345294	0.345294	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m72_homer_72.NRYTTCCGGY	homer_77.ATTGCGCAAC	homer_72.NRYTTCCGGY	0.411602	0.274401	0.329281	0.329281	10	10	8	12	0.666667	0.800000	0.800000	R	2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m73_homer_73.AWWNTGCTGAGTCAT	homer_77.ATTGCGCAAC	homer_73.AWWNTGCTGAGTCAT	0.402731	0.268487	0.402731	0.268487	10	15	10	15	0.666667	1.000000	0.666667	R	-3	47
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m74_homer_74.AGGCCTAG	homer_77.ATTGCGCAAC	homer_74.AGGCCTAG	0.140559	0.112447	0.112447	0.140559	10	8	8	10	0.800000	0.800000	1.000000	D	2	33
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m75_homer_75.VTTACGTAAYNNNNN	homer_77.ATTGCGCAAC	homer_75.VTTACGTAAYNNNNN	0.803364	0.535576	0.803364	0.535576	10	15	10	15	0.666667	1.000000	0.666667	R	-5	47
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m76_homer_76.TGCTGACTCA	homer_77.ATTGCGCAAC	homer_76.TGCTGACTCA	0.413728	0.275818	0.330982	0.330982	10	10	8	12	0.666667	0.800000	0.800000	R	-2	37
hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	hsc_lincorr_combined_dedup_m77_homer_77.ATTGCGCAAC	homer_77.ATTGCGCAAC	homer_77.ATTGCGCAAC	1.000000	1.000000	1.000000	1.000000	10	10	10	10	1.000000	1.000000	1.000000	D	0	37
;Analysis performed in 0.087864s