; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/04/12/oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/04/12/oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/04/12/oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/04/12/oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/04/12/oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	127	205	45	487	21	497	40	494	505	29	172	175
c	140	36	40	4	4	20	22	15	1	13	104	104
g	159	168	423	18	506	10	40	18	22	479	181	146
t	112	129	30	29	7	11	436	11	10	17	81	113
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m1_rc.png
;
a	136	95	77	35	49	49	60	5	8	8	46	79	98
c	151	122	263	452	467	428	2	511	509	506	62	163	209
g	160	203	79	13	3	2	410	8	2	3	10	150	99
t	80	107	108	27	8	48	55	3	8	10	409	135	121
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m2_rc.png
;
a	216	173	100	25	566	21	596	17	33	8	555	109	132	144	148
c	178	167	466	647	91	647	37	640	637	668	37	139	328	244	236
g	175	251	65	6	17	22	31	33	9	6	10	352	118	130	141
t	133	111	71	24	28	12	38	12	23	20	100	102	124	184	177
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m3_rc.png
;
a	190	189	83	36	139	33	652	11	24	20	576	111	139	157	154
c	210	187	517	637	569	689	20	691	700	710	80	149	365	266	257
g	195	241	70	16	17	8	42	37	6	7	13	392	131	144	158
t	158	136	83	64	28	23	39	14	23	16	84	101	118	186	184
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m4_rc.png
;
a	105	90	14	409	23	112	2	4	2	27	75	88
c	96	223	431	42	399	25	445	450	454	25	117	151
g	183	61	8	3	24	292	5	5	0	7	135	89
t	78	88	9	8	16	33	10	3	6	403	135	134
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m5_rc.png
;
a	91	116	21	40	4	412	17	422	422	30	121	131
c	138	107	386	5	12	15	13	10	1	31	117	96
g	107	103	29	2	427	18	45	14	19	376	121	125
t	119	129	19	408	12	10	380	9	13	18	96	103
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m6_rc.png
;
a	199	208	569	618	32	36	609	645	46	35	224	217
c	126	152	56	4	1	30	36	3	8	26	148	144
g	234	209	52	57	651	626	44	25	630	616	217	190
t	143	133	25	23	18	10	13	29	18	25	113	151
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m7_rc.png
;
a	459	401	73	91	86	238	44	74	108	577	455
c	652	792	1870	1949	1941	11	1852	1992	1923	725	680
g	547	425	101	27	26	121	146	16	31	177	534
t	537	577	151	128	142	1825	153	113	133	716	526
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m8_rc.png
;
a	213	184	84	29	71	77	184	11	13	14	158	203	182
c	286	207	588	796	786	706	2	842	834	825	483	267	320
g	215	304	100	18	11	11	582	11	11	10	35	189	181
t	161	180	103	32	7	81	107	11	17	26	199	216	192
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m9_rc.png
;
a	216	226	562	586	562	554	4	557	570	563	245	202
c	102	119	13	13	18	21	58	16	16	20	109	137
g	144	145	29	19	30	26	52	32	25	21	126	142
t	170	142	28	14	22	31	518	27	21	28	152	151
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m10_rc.png
;
a	277	281	562	44	35	30	51	15	45	20	149	175	235
c	250	299	55	6	8	57	84	25	11	20	102	401	279
g	353	328	212	1076	1059	1041	57	1082	166	1078	750	303	310
t	271	243	322	25	49	23	959	29	929	33	150	272	327
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m11_rc.png
;
a	551	562	1432	1390	1396	59	1457	1362	1421	511	520
c	306	356	45	74	61	1250	78	86	52	341	347
g	371	353	79	74	80	164	10	85	85	387	390
t	365	322	37	55	56	120	48	60	35	354	336
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m12_rc.png
;
a	426	480	1274	1357	85	131	1306	1319	80	392	442
c	323	331	99	12	59	1165	122	16	60	340	345
g	450	411	73	89	1313	136	19	104	1294	454	378
t	290	267	43	31	32	57	42	50	55	303	324
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m13_rc.png
;
a	204	176	55	29	67	69	181	7	10	7	327	158	174
c	256	175	588	737	728	646	6	789	786	779	250	248	282
g	194	303	69	14	7	8	522	12	8	5	35	229	180
t	157	157	99	31	9	88	102	3	7	20	199	176	175
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m14_rc.png
;
a	452	354	89	58	141	62	79	46	99	292	423
c	526	633	1685	1854	42	160	1717	1846	156	600	604
g	468	480	104	16	24	1612	116	21	25	607	448
t	571	550	139	89	1810	183	105	104	1737	518	542
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m15_rc.png
;
a	371	395	1048	1125	1100	1091	67	1037	118	356	401
c	191	227	56	27	37	36	80	52	41	244	236
g	254	300	51	44	40	42	68	70	62	284	183
t	404	298	65	24	43	51	1005	61	999	336	400
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m16_rc.png
;
a	113	117	45	374	13	382	21	385	392	23	130	122
c	102	82	40	3	5	9	11	6	0	10	75	94
g	94	108	61	13	380	9	22	7	13	362	128	102
t	100	102	263	19	11	9	355	11	4	14	76	91
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m17_rc.png
;
a	84	70	0	294	0	0	0	0	72	66
c	57	90	294	0	0	0	0	294	104	90
g	62	64	0	0	0	0	0	0	13	59
t	91	70	0	0	294	294	294	0	105	79
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m18_rc.png
;
a	150	165	460	460	0	460	460	460	155	131
c	81	74	0	0	0	0	0	0	87	99
g	127	131	0	0	460	0	0	0	132	120
t	102	90	0	0	0	0	0	0	86	110
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m19_rc.png
;
a	106	86	0	0	0	376	376	376	164	145
c	71	75	0	0	0	0	0	0	51	54
g	54	51	0	0	0	0	0	0	75	71
t	145	164	376	376	376	0	0	0	86	106
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/04/12//oligo-analysis_2026-04-12.201002_ZcNnEw_pssm_count_matrices_logo_m20_rc.png
;
; Host name	rsat
; Job started	2026-04-12.201017
; Job done	2026-04-12.201024
; Seconds	0.52
;	user	0.52
;	system	0.21
;	cuser	5.52
;	csystem	0.8