AC  oligos_6nt_mkv1_m1
XX
ID  oligos_6nt_mkv1_m1
XX
DE  wbCAGCAsrw
P0           a         c         g         t
1            1         0         0         2
2            0         1         1         1
3            0         3         0         0
4            3         0         0         0
5            0         0         3         0
6            0         3         0         0
7            3         0         0         0
8            0         1         2         0
9            1         0         2         0
10           1         0         0         2
XX
BA  3 sequences
XX
BS  TTCAGCACGT; site_0; 1; 10; 0; p
BS  TCCAGCAGGA; site_1; 1; 10; 0; p
BS  AGCAGCAGAT; site_2; 1; 10; 0; p
CC  program: feature
CC  matrix.nb: 1
CC  matrix.nb: 1
CC  sites: 3
CC  consensus.strict: tcCAGCAggt
CC  consensus.strict.rc: ACCTGCTGGA
CC  consensus.IUPAC: wbCAGCAsrw
CC  consensus.IUPAC.rc: WYSTGCTGVW
CC  consensus.regexp: [at][cgt]CAGCA[cg][ag][at]
CC  consensus.regexp.rc: [AT][CT][CG]TGCTG[ACG][AT]
XX
//
AC  oligos_6nt_mkv1_m2
XX
ID  oligos_6nt_mkv1_m2
XX
DE  hmGAGAGGAms
P0           a         c         g         t
1            2         2         1         2
2            2         4         0         1
3            0         0         7         0
4            7         0         0         0
5            0         0         7         0
6            7         0         0         0
7            0         0         7         0
8            0         0         7         0
9            7         0         0         0
10           4         2         1         0
11           1         2         4         0
XX
BA  7 sequences
XX
BS  TAGAGAGGACA; site_0; 1; 11; 0; p
BS  CCGAGAGGAAC; site_1; 1; 11; 0; p
BS  CTGAGAGGACG; site_2; 1; 11; 0; p
BS  GAGAGAGGAAC; site_3; 1; 11; 0; p
BS  TCGAGAGGAAG; site_4; 1; 11; 0; p
BS  ACGAGAGGAGG; site_5; 1; 11; 0; p
BS  ACGAGAGGAAG; site_6; 1; 11; 0; p
CC  program: feature
CC  matrix.nb: 2
CC  matrix.nb: 2
CC  sites: 7
CC  consensus.strict: acGAGAGGAag
CC  consensus.strict.rc: CTTCCTCTCGT
CC  consensus.IUPAC: hmGAGAGGAms
CC  consensus.IUPAC.rc: SKTCCTCTCKD
CC  consensus.regexp: [act][ac]GAGAGGA[ac][cg]
CC  consensus.regexp.rc: [CG][GT]TCCTCTC[GT][AGT]
XX
//
AC  oligos_6nt_mkv1_m3
XX
ID  oligos_6nt_mkv1_m3
XX
DE  vsAAGGAGhw
P0           a         c         g         t
1            1         2         1         0
2            0         1         3         0
3            4         0         0         0
4            4         0         0         0
5            0         0         4         0
6            0         0         4         0
7            4         0         0         0
8            0         0         4         0
9            2         1         0         1
10           3         0         0         1
XX
BA  4 sequences
XX
BS  AGAAGGAGAA; site_0; 1; 10; 0; p
BS  GCAAGGAGCA; site_1; 1; 10; 0; p
BS  CGAAGGAGTA; site_2; 1; 10; 0; p
BS  CGAAGGAGAT; site_3; 1; 10; 0; p
CC  program: feature
CC  matrix.nb: 3
CC  matrix.nb: 3
CC  sites: 4
CC  consensus.strict: cgAAGGAGaa
CC  consensus.strict.rc: TTCTCCTTCG
CC  consensus.IUPAC: vsAAGGAGhw
CC  consensus.IUPAC.rc: WDCTCCTTSB
CC  consensus.regexp: [acg][cg]AAGGAG[act][at]
CC  consensus.regexp.rc: [AT][AGT]CTCCTT[CG][CGT]
XX
//
AC  oligos_6nt_mkv1_m4
XX
ID  oligos_6nt_mkv1_m4
XX
DE  ndmTCGGssb
P0           a         c         g         t
1            1         1         1         1
2            1         0         2         1
3            3         1         0         0
4            0         0         0         4
5            0         4         0         0
6            0         0         4         0
7            0         0         4         0
8            0         1         3         0
9            0         1         3         0
10           0         1         2         1
XX
BA  4 sequences
XX
BS  GGATCGGGGT; site_0; 1; 10; 0; p
BS  CACTCGGGGG; site_1; 1; 10; 0; p
BS  TTATCGGCGG; site_2; 1; 10; 0; p
BS  AGATCGGGCC; site_3; 1; 10; 0; p
CC  program: feature
CC  matrix.nb: 4
CC  matrix.nb: 4
CC  sites: 4
CC  consensus.strict: -gaTCGGggg
CC  consensus.strict.rc: CCCCCGATC-
CC  consensus.IUPAC: ndmTCGGssb
CC  consensus.IUPAC.rc: VSSCCGAKHN
CC  consensus.regexp: [acgt][agt][ac]TCGG[cg][cg][cgt]
CC  consensus.regexp.rc: [ACG][CG][CG]CCGA[GT][ACT][ACGT]
XX
//
AC  oligos_6nt_mkv1_m5
XX
ID  oligos_6nt_mkv1_m5
XX
DE  bsACrTAGrn
P0           a         c         g         t
1            0         1         1         2
2            0         2         2         0
3            4         0         0         0
4            0         4         0         0
5            1         0         3         0
6            0         0         0         4
7            4         0         0         0
8            0         0         4         0
9            2         0         2         0
10           1         1         1         1
XX
BA  4 sequences
XX
BS  TCACGTAGAG; site_0; 1; 10; 0; p
BS  GCACATAGGA; site_1; 1; 10; 0; p
BS  TGACGTAGAC; site_2; 1; 10; 0; p
BS  CGACGTAGGT; site_3; 1; 10; 0; p
CC  program: feature
CC  matrix.nb: 5
CC  matrix.nb: 5
CC  sites: 4
CC  consensus.strict: tcACgTAGa-
CC  consensus.strict.rc: -TCTACGTGA
CC  consensus.IUPAC: bsACrTAGrn
CC  consensus.IUPAC.rc: NYCTAYGTSV
CC  consensus.regexp: [cgt][cg]AC[ag]TAG[ag][acgt]
CC  consensus.regexp.rc: [ACGT][CT]CTA[CT]GT[CG][ACG]
XX
//
AC  oligos_7nt_mkv1_m1
XX
ID  oligos_7nt_mkv1_m1
XX
DE  hnmGAGAGGAAsm
P0           a         c         g         t
1            2         1         0         1
2            1         1         1         1
3            1         3         0         0
4            0         0         4         0
5            4         0         0         0
6            0         0         4         0
7            4         0         0         0
8            0         0         4         0
9            0         0         4         0
10           4         0         0         0
11           4         0         0         0
12           0         2         2         0
13           2         2         0         0
XX
BA  4 sequences
XX
BS  CCCGAGAGGAACC; site_0; 1; 13; 0; p
BS  TGAGAGAGGAACC; site_1; 1; 13; 0; p
BS  ATCGAGAGGAAGA; site_2; 1; 13; 0; p
BS  AACGAGAGGAAGA; site_3; 1; 13; 0; p
CC  program: feature
CC  matrix.nb: 1
CC  matrix.nb: 1
CC  sites: 4
CC  consensus.strict: a-cGAGAGGAAca
CC  consensus.strict.rc: TGTTCCTCTCG-T
CC  consensus.IUPAC: hnmGAGAGGAAsm
CC  consensus.IUPAC.rc: KSTTCCTCTCKND
CC  consensus.regexp: [act][acgt][ac]GAGAGGAA[cg][ac]
CC  consensus.regexp.rc: [GT][CG]TTCCTCTC[GT][ACGT][AGT]
XX
//
AC  oligos_7nt_mkv1_m2
XX
ID  oligos_7nt_mkv1_m2
XX
DE  hbCAGmTCAvs
P0           a         c         g         t
1            1         1         0         1
2            0         1         1         1
3            0         3         0         0
4            3         0         0         0
5            0         0         3         0
6            2         1         0         0
7            0         0         0         3
8            0         3         0         0
9            3         0         0         0
10           1         1         1         0
11           0         2         1         0
XX
BA  3 sequences
XX
BS  CTCAGATCAGC; site_0; 1; 11; 0; p
BS  TCCAGCTCACC; site_1; 1; 11; 0; p
BS  AGCAGATCAAG; site_2; 1; 11; 0; p
CC  program: feature
CC  matrix.nb: 2
CC  matrix.nb: 2
CC  sites: 3
CC  consensus.strict: acCAGaTCAac
CC  consensus.strict.rc: GTTGATCTGGT
CC  consensus.IUPAC: hbCAGmTCAvs
CC  consensus.IUPAC.rc: SBTGAKCTGVD
CC  consensus.regexp: [act][cgt]CAG[ac]TCA[acg][cg]
CC  consensus.regexp.rc: [CG][CGT]TGA[GT]CTG[ACG][AGT]
XX
//
AC  oligos_7nt_mkv1_m3
XX
ID  oligos_7nt_mkv1_m3
XX
DE  caaggagcagca
P0           a         c         g         t
1            0         1         0         0
2            1         0         0         0
3            1         0         0         0
4            0         0         1         0
5            0         0         1         0
6            1         0         0         0
7            0         0         1         0
8            0         1         0         0
9            1         0         0         0
10           0         0         1         0
11           0         1         0         0
12           1         0         0         0
XX
BA  1 sequences
XX
BS  CAAGGAGCAGCA; site_0; 1; 12; 0; p
CC  program: feature
CC  matrix.nb: 3
CC  matrix.nb: 3
CC  sites: 1
CC  consensus.strict: caaggagcagca
CC  consensus.strict.rc: TGCTGCTCCTTG
CC  consensus.IUPAC: caaggagcagca
CC  consensus.IUPAC.rc: TGCTGCTCCTTG
CC  consensus.regexp: caaggagcagca
CC  consensus.regexp.rc: TGCTGCTCCTTG
XX
//
AC  oligos_7nt_mkv1_m4
XX
ID  oligos_7nt_mkv1_m4
XX
DE  rsCCCGATCyT
P0           a         c         g         t
1            1         0         1         0
2            0         1         1         0
3            0         2         0         0
4            0         2         0         0
5            0         2         0         0
6            0         0         2         0
7            2         0         0         0
8            0         0         0         2
9            0         2         0         0
10           0         1         0         1
11           0         0         0         2
XX
BA  2 sequences
XX
BS  ACCCCGATCCT; site_0; 1; 11; 0; p
BS  GGCCCGATCTT; site_1; 1; 11; 0; p
CC  program: feature
CC  matrix.nb: 4
CC  matrix.nb: 4
CC  sites: 2
CC  consensus.strict: acCCCGATCcT
CC  consensus.strict.rc: AGGATCGGGGT
CC  consensus.IUPAC: rsCCCGATCyT
CC  consensus.IUPAC.rc: ARGATCGGGSY
CC  consensus.regexp: [ag][cg]CCCGATC[ct]T
CC  consensus.regexp.rc: A[AG]GATCGGG[CG][CT]
XX
//
AC  oligos_7nt_mkv1_m5
XX
ID  oligos_7nt_mkv1_m5
XX
DE  gccgcgtactg
P0           a         c         g         t
1            0         0         1         0
2            0         1         0         0
3            0         1         0         0
4            0         0         1         0
5            0         1         0         0
6            0         0         1         0
7            0         0         0         1
8            1         0         0         0
9            0         1         0         0
10           0         0         0         1
11           0         0         1         0
XX
BA  1 sequences
XX
BS  GCCGCGTACTG; site_0; 1; 11; 0; p
CC  program: feature
CC  matrix.nb: 5
CC  matrix.nb: 5
CC  sites: 1
CC  consensus.strict: gccgcgtactg
CC  consensus.strict.rc: CAGTACGCGGC
CC  consensus.IUPAC: gccgcgtactg
CC  consensus.IUPAC.rc: CAGTACGCGGC
CC  consensus.regexp: gccgcgtactg
CC  consensus.regexp.rc: CAGTACGCGGC
XX
//