; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/04/21/peak-motifs.2026-04-21.014834_2026-04-21.014834_X2uSrl/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2026/04/21/peak-motifs.2026-04-21.014834_2026-04-21.014834_X2uSrl/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/04/21/peak-motifs.2026-04-21.014834_2026-04-21.014834_X2uSrl/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/04/21/peak-motifs.2026-04-21.014834_2026-04-21.014834_X2uSrl/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	48	118	138	2	162	0	16	169	141	73	86
c	37	17	0	0	0	173	2	2	6	6	35
g	3	6	5	27	0	0	0	2	12	9	25
t	85	32	30	144	11	0	155	0	14	85	27
//
; Sites	173
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TCATACAAAAC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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AAAGACTAATC
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CAATTCTAATA
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CAATACTAATA
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CCATACTAATT
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CAAGACTAATA
>site_21
CAATACTAATT
>site_22
TAATACTATGT
>site_23
CAATTCTAATA
>site_24
CAATACTAATA
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CCATACTAATT
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CAAGACTAATA
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CAATACTAATT
>site_28
TAATACTATGT
>site_29
CAATTCTAATA
>site_30
CAATACTAATA
>site_31
CCATACTAATT
>site_32
CAAGACTAATA
>site_33
CAATACTAATT
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TAATACTATGT
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CAATTCTAATA
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CAATACTAATA
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CCATACTAATT
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CAAGACTAATA
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CAATACTAATT
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TAATACTATGT
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CAATTCTAATA
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CAATACTAATA
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CCATACTAATT
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CAAGACTAATA
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CAATACTAATT
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TAATACTATGT
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CAATTCTAATA
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CAATACTAATA
>site_49
CCATACTAATT
>site_50
CAAGACTAATA
>site_51
CAATACTAATT
>site_52
TAATACTATGT
>site_53
CAATTCTAATA
>site_54
CAATACTAATA
>site_55
CCATACTAATT
>site_56
CAAGACTAATA
>site_57
CAATACTAATT
>site_58
TAATACTATGT
>site_59
ACATACAAATG
>site_60
TATTACTAATA
>site_61
TAATACAAAAA
>site_62
AAATACTAAAA
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TTATACTAGAC
>site_64
TATTACTAAAG
>site_65
TATTACTAATA
>site_66
TAATACAAAAA
>site_67
AAATACTAAAA
>site_68
TTATACTAGAC
>site_69
TATTACTAAAG
>site_70
TATTACTAATA
>site_71
TAATACAAAAA
>site_72
AAATACTAAAA
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TTATACTAGAC
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TATTACTAAAG
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TATTACTAATA
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TAATACAAAAA
>site_77
AAATACTAAAA
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TTATACTAGAC
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TATTACTAAAG
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TATTACTAATA
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TAATACAAAAA
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AAATACTAAAA
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TTATACTAGAC
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TATTACTAAAG
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TATTACTAATA
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TAATACAAAAA
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AAATACTAAAA
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TTATACTAGAC
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TATTACTAAAG
>site_90
TATTACTAATA
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TAATACAAAAA
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AAATACTAAAA
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TTATACTAGAC
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TATTACTAAAG
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TATTACTAATA
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TAATACAAAAA
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AAATACTAAAA
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TTATACTAGAC
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TATTACTAAAG
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TATTACTAATA
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TAATACAAAAA
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AAATACTAAAA
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TTATACTAGAC
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TATTACTAAAG
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TATTACTAATA
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TAATACAAAAA
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AAATACTAAAA
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TTATACTAGAC
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TATTACTAAAG
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TATTACTAATA
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TAATACAAAAA
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AAATACTAAAA
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TTATACTAGAC
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TATTACTAAAG
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TATTACTAATA
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TAATACAAAAA
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AAATACTAAAA
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TTATACTAGAC
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TATTACTAAAG
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ATATACTATTA
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AGATACTACAA
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TAAGACTAATG
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TTTTACTAATA
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ATGTACTAACG
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TAATTCTAAAC
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ATATACTATTA
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AGATACTACAA
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TAAGACTAATG
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TTTTACTAATA
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ATGTACTAACG
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TAATTCTAAAC
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ATATACTATTA
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AGATACTACAA
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TAAGACTAATG
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TTTTACTAATA
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ATGTACTAACG
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TAATTCTAAAC
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ATATACTATTA
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AGATACTACAA
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TAAGACTAATG
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TTTTACTAATA
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ATGTACTAACG
>site_143
TAATTCTAAAC
>site_144
TTATACTAAGG
>site_145
ATATACTAAAA
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TCTTACTAAAA
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TTATACTAAAA
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TTATACTAAAG
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ACATACTGAAT
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TGATACTCAAT
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AAATACTACAC
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TAATACAAATA
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TTATACTAAGG
>site_154
ATATACTAAAA
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TCTTACTAAAA
>site_156
TTATACTAAAA
>site_157
TTATACTAAAG
>site_158
ACATACTGAAT
>site_159
TGATACTCAAT
>site_160
AAATACTACAC
>site_161
TAATACAAATA
>site_162
CAATACCAATA
>site_163
GCATACTATTA
>site_164
TAAAACTAATA
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TCATACTAAAA
>site_166
CAATACCAATA
>site_167
GCATACTATTA
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TAAAACTAATA
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TCATACTAAAA
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AAGTACTAACT
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TAATACTAACT
>site_172
GAATACTATTA
; Host name	rsat
; Job started	2026-04-21.014845
; Job done	2026-04-21.014845
; Seconds	0.11
;	user	0.11
;	system	0.01
;	cuser	0
;	csystem	0
