AC  assembly_1
XX
ID  assembly_1
XX
DE  wtTyTTCTAAwt
P0           a         c         g         t
1            3         1         0         3
2            1         1         0         5
3            0         0         0         7
4            1         3         0         3
5            0         0         0         7
6            0         0         0         7
7            0         7         0         0
8            0         0         0         7
9            6         0         0         1
10           6         0         0         1
11           3         1         0         3
12           1         1         1         4
XX
CC  program: feature
CC  matrix.nb: 1
CC  matrix.nb: 1
CC  sites: 7
CC  consensus.strict: atTcTTCTAAat
CC  consensus.strict.rc: ATTTAGAAGAAT
CC  consensus.IUPAC: wtTyTTCTAAwt
CC  consensus.IUPAC.rc: AWTTAGAARAAW
CC  consensus.regexp: [at]tT[ct]TTCTAA[at]t
CC  consensus.regexp.rc: A[AT]TTAGAA[AG]AA[AT]
XX
//
AC  assembly_2
XX
ID  assembly_2
XX
DE  ddTTTrTCGAAww
P0           a         c         g         t
1            1         0         1         2
2            1         0         1         2
3            0         0         0         4
4            0         0         0         4
5            0         0         0         4
6            3         0         1         0
7            0         0         0         4
8            0         4         0         0
9            0         0         4         0
10           4         0         0         0
11           4         0         0         0
12           3         0         0         1
13           3         0         0         1
XX
CC  program: feature
CC  matrix.nb: 2
CC  matrix.nb: 2
CC  sites: 4
CC  consensus.strict: ttTTTaTCGAAaa
CC  consensus.strict.rc: TTTTCGATAAAAA
CC  consensus.IUPAC: ddTTTrTCGAAww
CC  consensus.IUPAC.rc: WWTTCGAYAAAHH
CC  consensus.regexp: [agt][agt]TTT[ag]TCGAA[at][at]
CC  consensus.regexp.rc: [AT][AT]TTCGA[CT]AAA[ACT][ACT]
XX
//
AC  assembly_3
XX
ID  assembly_3
XX
DE  TATAAGTGACCmA
P0           a         c         g         t
1            0         0         0         2
2            2         0         0         0
3            0         0         0         2
4            2         0         0         0
5            2         0         0         0
6            0         0         2         0
7            0         0         0         2
8            0         0         2         0
9            2         0         0         0
10           0         2         0         0
11           0         2         0         0
12           1         1         0         0
13           2         0         0         0
XX
CC  program: feature
CC  matrix.nb: 3
CC  matrix.nb: 3
CC  sites: 2
CC  consensus.strict: TATAAGTGACCaA
CC  consensus.strict.rc: TTGGTCACTTATA
CC  consensus.IUPAC: TATAAGTGACCmA
CC  consensus.IUPAC.rc: TKGGTCACTTATA
CC  consensus.regexp: TATAAGTGACC[ac]A
CC  consensus.regexp.rc: T[GT]GGTCACTTATA
XX
//
AC  assembly_4
XX
ID  assembly_4
XX
DE  mwATTTTTCkaw
P0           a         c         g         t
1            6         4         0         1
2            4         1         2         4
3           11         0         0         0
4            1         0         0        10
5            0         0         0        11
6            0         0         0        11
7            0         0         1        10
8            0         0         0        11
9            1         9         0         1
10           0         0         7         4
11           7         1         2         1
12           3         1         1         6
XX
CC  program: feature
CC  matrix.nb: 4
CC  matrix.nb: 4
CC  sites: 11
CC  consensus.strict: aaATTTTTCgat
CC  consensus.strict.rc: ATCGAAAAATTT
CC  consensus.IUPAC: mwATTTTTCkaw
CC  consensus.IUPAC.rc: WTMGAAAAATWK
CC  consensus.regexp: [ac][at]ATTTTTC[gt]a[at]
CC  consensus.regexp.rc: [AT]T[AC]GAAAAAT[AT][GT]
XX
//
AC  assembly_5
XX
ID  assembly_5
XX
DE  TwRATATTTAAA
P0           a         c         g         t
1            1         1         0         6
2            4         1         1         2
3            2         0         6         0
4            7         0         1         0
5            0         0         0         8
6            8         0         0         0
7            1         0         0         7
8            0         0         0         8
9            0         0         0         8
10           8         0         0         0
11           6         0         1         1
12           6         0         1         1
XX
CC  program: feature
CC  matrix.nb: 5
CC  matrix.nb: 5
CC  sites: 8
CC  consensus.strict: TaGATATTTAAA
CC  consensus.strict.rc: TTTAAATATCTA
CC  consensus.IUPAC: TwRATATTTAAA
CC  consensus.IUPAC.rc: TTTAAATATYWA
CC  consensus.regexp: T[at][AG]ATATTTAAA
CC  consensus.regexp.rc: TTTAAATAT[CT][AT]A
XX
//
AC  assembly_6
XX
ID  assembly_6
XX
DE  wrGAAAGAbr
P0           a         c         g         t
1            3         0         0         1
2            3         0         1         0
3            0         0         4         0
4            4         0         0         0
5            4         0         0         0
6            4         0         0         0
7            0         0         4         0
8            4         0         0         0
9            0         1         1         2
10           3         0         1         0
XX
CC  program: feature
CC  matrix.nb: 6
CC  matrix.nb: 6
CC  sites: 4
CC  consensus.strict: aaGAAAGAta
CC  consensus.strict.rc: TATCTTTCTT
CC  consensus.IUPAC: wrGAAAGAbr
CC  consensus.IUPAC.rc: YVTCTTTCYW
CC  consensus.regexp: [at][ag]GAAAGA[cgt][ag]
CC  consensus.regexp.rc: [CT][ACG]TCTTTC[CT][AT]
XX
//
AC  assembly_7
XX
ID  assembly_7
XX
DE  rdGATAGArv
P0           a         c         g         t
1            2         0         1         0
2            1         0         1         1
3            0         0         3         0
4            3         0         0         0
5            0         0         0         3
6            3         0         0         0
7            0         0         3         0
8            3         0         0         0
9            2         0         1         0
10           1         1         1         0
XX
CC  program: feature
CC  matrix.nb: 7
CC  matrix.nb: 7
CC  sites: 3
CC  consensus.strict: aaGATAGAaa
CC  consensus.strict.rc: TTTCTATCTT
CC  consensus.IUPAC: rdGATAGArv
CC  consensus.IUPAC.rc: BYTCTATCHY
CC  consensus.regexp: [ag][agt]GATAGA[ag][acg]
CC  consensus.regexp.rc: [CGT][CT]TCTATC[ACT][CT]
XX
//
AC  assembly_8
XX
ID  assembly_8
XX
DE  rAwATTTAAAtw
P0           a         c         g         t
1            7         0         5         3
2           13         0         1         1
3            4         1         0        10
4           13         1         0         1
5            0         0         0        15
6            2         0         0        13
7            0         0         0        15
8           15         0         0         0
9           15         0         0         0
10          15         0         0         0
11           2         0         3        10
12           7         2         2         4
XX
CC  program: feature
CC  matrix.nb: 8
CC  matrix.nb: 8
CC  sites: 15
CC  consensus.strict: aAtATTTAAAta
CC  consensus.strict.rc: TATTTAAATATT
CC  consensus.IUPAC: rAwATTTAAAtw
CC  consensus.IUPAC.rc: WATTTAAATWTY
CC  consensus.regexp: [ag]A[at]ATTTAAAt[at]
CC  consensus.regexp.rc: [AT]ATTTAAAT[AT]T[CT]
XX
//
AC  assembly_9
XX
ID  assembly_9
XX
DE  rrAAGAAAGAkA
P0           a         c         g         t
1            3         0         2         1
2            4         0         2         0
3            5         0         0         1
4            5         0         1         0
5            0         0         6         0
6            6         0         0         0
7            5         0         0         1
8            6         0         0         0
9            0         1         5         0
10           6         0         0         0
11           1         1         2         2
12           5         0         1         0
XX
CC  program: feature
CC  matrix.nb: 9
CC  matrix.nb: 9
CC  sites: 6
CC  consensus.strict: aaAAGAAAGAgA
CC  consensus.strict.rc: TCTCTTTCTTTT
CC  consensus.IUPAC: rrAAGAAAGAkA
CC  consensus.IUPAC.rc: TMTCTTTCTTYY
CC  consensus.regexp: [ag][ag]AAGAAAGA[gt]A
CC  consensus.regexp.rc: T[AC]TCTTTCTT[CT][CT]
XX
//
