rsync -ruptl /var/www/html/rsat/perl-scripts/lib/js /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT


rsync -ruptl /var/www/html/rsat/public_html/images/program_icons/matrix-clustering_icons /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_query_matrices.mscan -from mscan -to tf -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/defaut_w_cor_ncor_0_8_miniatura_motifs_input_motifs_processed_1.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/defaut_w_cor_ncor_0_8_miniatura_motifs_input_motifs_processed_1.tf -from tf -to transfac -prefix_id defaut_w_cor_ncor_0_8_miniatura_motifs -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/defaut_w_cor_ncor_0_8_miniatura_motifs_input_motifs_processed.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/defaut_w_cor_ncor_0_8_miniatura_motifs_input_motifs_processed.tf  > /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -split -from tf -to tf -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/motif


 cat /var/www/html/rsat/R-scripts/matrix-clustering.R | /usr/bin/R --slave --no-save --no-restore --no-environ --args " infile = '/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/pairwise_compa.tab'; hclust.method = 'average'; description.file = '/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/pairwise_compa_matrix_descriptions.tab'; distance.table = '/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/distance_table.tab'; alignment.file = '/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/alignment_table.tab'; verbosity = 0; metric = 'Ncor'; heatmap.color.palette = 'YlOrRd'; heatmap.color.classes = '9'; export.newick = 0; radial.only = 0; draw.heatmap = 1; draw.consensus = 0; pos.hclust.in.heatmap = 'column'; lthsp = 'Ncor_0.8_cor_0.6_'; uthsp = 'Ncor_1_'; out.prefix = '/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering'; "


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_1_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_1_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_2_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_2_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_3_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_3_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_4_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_4_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_5_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_5_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_6_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_6_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_7_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_7_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_8_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_8_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_9_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_9_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_10_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_10_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_11_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_11_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_12_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_12_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_13_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_13_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_14_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_14_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_15_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_15_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_16_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_16_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_17_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_17_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_18_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_18_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_19_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_19_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_20_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_20_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_21_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_21_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_22_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_22_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_23_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_23_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_24_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_24_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_25_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_25_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_26_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_26_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_27_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_27_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_28_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_28_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_29_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_29_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_30_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_30_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_31_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_31_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_32_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_32_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_33_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_33_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_34_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_34_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_35_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_35_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_36_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_36_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_37_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_37_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_38_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_38_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_39_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_39_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_40_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_40_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_41_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_41_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_43_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_43_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_42_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_42_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_45_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_45_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_44_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_44_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_46_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_46_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_47_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_47_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_48_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_48_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_49_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_49_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_50_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_50_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_51_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_51_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_52_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_52_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_53_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_53_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_54_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_54_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_55_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_55_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_56_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_56_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_57_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_57_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_58_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_58_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_59_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_59_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_60_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_60_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_61_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_61_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_62_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_62_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_63_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_63_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_64_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_64_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_65_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_65_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_66_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_66_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_67_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_67_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_68_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_68_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_69_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_69_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_70_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_70_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_71_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_71_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_72_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_72_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_74_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_74_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_73_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_73_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_75_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_75_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_76_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_76_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_77_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_77_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_78_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_78_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_79_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_79_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_80_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_80_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_81_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_81_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_82_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_82_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/cluster_83_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/cluster_83_transfac_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m87_REST_m14_known_matrix_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_10/cluster_10_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m6_E2F6_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_11/cluster_11_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m14_KAISO_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m74_KAISO_HUMAN.H11MO.0.A_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_1/cluster_1_node_1_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_10/cluster_10_matrices_temp.tf -from tf -to tf  -attr name cluster_10 -attr accession cluster_10 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::REST_m14_known_matrix' -set_attr merged_ID 'REST_m14_known_matrix' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_10/cluster_10_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_11/cluster_11_matrices_temp.tf -from tf -to tf  -attr name cluster_11 -attr accession cluster_11 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::E2F6_HUMAN.H11MO.0.A' -set_attr merged_ID 'E2F6_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_11/cluster_11_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_1/cluster_1_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc mean -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_1/cluster_1_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_10/cluster_10_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_1/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/IC_test_2026-05-11.153600_SBhowR


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_11/cluster_11_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_1/cluster_1_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m7_E2F7_HUMAN.H11MO.0.B_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_12/cluster_12_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m10_EGR2_HUMAN.H11MO.1.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_13/cluster_13_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_12/cluster_12_matrices_temp.tf -from tf -to tf  -attr name cluster_12 -attr accession cluster_12 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::E2F7_HUMAN.H11MO.0.B' -set_attr merged_ID 'E2F7_HUMAN.H11MO.0.B' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_12/cluster_12_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_13/cluster_13_matrices_temp.tf -from tf -to tf  -attr name cluster_13 -attr accession cluster_13 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::EGR2_HUMAN.H11MO.1.A' -set_attr merged_ID 'EGR2_HUMAN.H11MO.1.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_13/cluster_13_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_13/cluster_13_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_12/cluster_12_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m8_EGR1_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_14/cluster_14_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m5_E2F4_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_15/cluster_15_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m22_KLF3_HUMAN.H11MO.0.B_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_16/cluster_16_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_14/cluster_14_matrices_temp.tf -from tf -to tf  -attr name cluster_14 -attr accession cluster_14 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::EGR1_HUMAN.H11MO.0.A' -set_attr merged_ID 'EGR1_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_14/cluster_14_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_15/cluster_15_matrices_temp.tf -from tf -to tf  -attr name cluster_15 -attr accession cluster_15 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::E2F4_HUMAN.H11MO.0.A' -set_attr merged_ID 'E2F4_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_15/cluster_15_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_16/cluster_16_matrices_temp.tf -from tf -to tf  -attr name cluster_16 -attr accession cluster_16 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::KLF3_HUMAN.H11MO.0.B' -set_attr merged_ID 'KLF3_HUMAN.H11MO.0.B' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_16/cluster_16_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_16/cluster_16_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_15/cluster_15_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_14/cluster_14_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m47_SP3_HUMAN.H11MO.0.B_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_17/cluster_17_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m17_KLF12_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_18/cluster_18_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m28_MAZ_HUMAN.H11MO.1.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_19/cluster_19_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_17/cluster_17_matrices_temp.tf -from tf -to tf  -attr name cluster_17 -attr accession cluster_17 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::SP3_HUMAN.H11MO.0.B' -set_attr merged_ID 'SP3_HUMAN.H11MO.0.B' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_17/cluster_17_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_18/cluster_18_matrices_temp.tf -from tf -to tf  -attr name cluster_18 -attr accession cluster_18 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::KLF12_HUMAN.H11MO.0.C' -set_attr merged_ID 'KLF12_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_18/cluster_18_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_19/cluster_19_matrices_temp.tf -from tf -to tf  -attr name cluster_19 -attr accession cluster_19 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::MAZ_HUMAN.H11MO.1.A' -set_attr merged_ID 'MAZ_HUMAN.H11MO.1.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_19/cluster_19_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_18/cluster_18_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_19/cluster_19_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_17/cluster_17_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m32_PATZ1_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_20/cluster_20_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m68_ZN467_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_21/cluster_21_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m15_KAISO_HUMAN.H11MO.1.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m75_KAISO_HUMAN.H11MO.1.A_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_1/cluster_2_node_1_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_20/cluster_20_matrices_temp.tf -from tf -to tf  -attr name cluster_20 -attr accession cluster_20 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::PATZ1_HUMAN.H11MO.0.C' -set_attr merged_ID 'PATZ1_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_20/cluster_20_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_21/cluster_21_matrices_temp.tf -from tf -to tf  -attr name cluster_21 -attr accession cluster_21 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZN467_HUMAN.H11MO.0.C' -set_attr merged_ID 'ZN467_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_21/cluster_21_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_1/cluster_2_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_2 -name cluster_2 -calc mean -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_1/cluster_2_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_20/cluster_20_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_21/cluster_21_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_1/cluster_2_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/IC_test_2026-05-11.153604_9mGUuL


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_1/cluster_2_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m85_REST_m12_known_matrix_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_22/cluster_22_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m62_ZN148_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_23/cluster_23_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_22/cluster_22_matrices_temp.tf -from tf -to tf  -attr name cluster_22 -attr accession cluster_22 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::REST_m12_known_matrix' -set_attr merged_ID 'REST_m12_known_matrix' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_22/cluster_22_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_23/cluster_23_matrices_temp.tf -from tf -to tf  -attr name cluster_23 -attr accession cluster_23 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZN148_HUMAN.H11MO.0.D' -set_attr merged_ID 'ZN148_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_23/cluster_23_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_22/cluster_22_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_23/cluster_23_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m65_ZN281_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_24/cluster_24_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m45_SP2_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_25/cluster_25_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m48_SP4_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_26/cluster_26_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_25/cluster_25_matrices_temp.tf -from tf -to tf  -attr name cluster_25 -attr accession cluster_25 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::SP2_HUMAN.H11MO.0.A' -set_attr merged_ID 'SP2_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_25/cluster_25_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_24/cluster_24_matrices_temp.tf -from tf -to tf  -attr name cluster_24 -attr accession cluster_24 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZN281_HUMAN.H11MO.0.A' -set_attr merged_ID 'ZN281_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_24/cluster_24_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_26/cluster_26_matrices_temp.tf -from tf -to tf  -attr name cluster_26 -attr accession cluster_26 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::SP4_HUMAN.H11MO.0.A' -set_attr merged_ID 'SP4_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_26/cluster_26_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_24/cluster_24_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_25/cluster_25_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_26/cluster_26_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m86_REST_m13_known_matrix_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_27/cluster_27_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m18_KLF14_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_28/cluster_28_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m26_KLF9_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_29/cluster_29_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_27/cluster_27_matrices_temp.tf -from tf -to tf  -attr name cluster_27 -attr accession cluster_27 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::REST_m13_known_matrix' -set_attr merged_ID 'REST_m13_known_matrix' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_27/cluster_27_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_28/cluster_28_matrices_temp.tf -from tf -to tf  -attr name cluster_28 -attr accession cluster_28 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::KLF14_HUMAN.H11MO.0.D' -set_attr merged_ID 'KLF14_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_28/cluster_28_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_29/cluster_29_matrices_temp.tf -from tf -to tf  -attr name cluster_29 -attr accession cluster_29 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::KLF9_HUMAN.H11MO.0.C' -set_attr merged_ID 'KLF9_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_29/cluster_29_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_28/cluster_28_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_27/cluster_27_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_29/cluster_29_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m46_SP2_HUMAN.H11MO.1.B_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_30/cluster_30_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m27_MAZ_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_31/cluster_31_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m16_KAISO_HUMAN.H11MO.2.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m76_KAISO_HUMAN.H11MO.2.A_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_1/cluster_3_node_1_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_31/cluster_31_matrices_temp.tf -from tf -to tf  -attr name cluster_31 -attr accession cluster_31 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::MAZ_HUMAN.H11MO.0.A' -set_attr merged_ID 'MAZ_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_31/cluster_31_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_30/cluster_30_matrices_temp.tf -from tf -to tf  -attr name cluster_30 -attr accession cluster_30 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::SP2_HUMAN.H11MO.1.B' -set_attr merged_ID 'SP2_HUMAN.H11MO.1.B' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_30/cluster_30_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_1/cluster_3_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_3 -name cluster_3 -calc mean -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_1/cluster_3_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_1/cluster_3_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/IC_test_2026-05-11.153608_CQ8Qvy


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_31/cluster_31_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_30/cluster_30_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_1/cluster_3_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m44_SP1_HUMAN.H11MO.1.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_32/cluster_32_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m49_SP4_HUMAN.H11MO.1.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_33/cluster_33_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_32/cluster_32_matrices_temp.tf -from tf -to tf  -attr name cluster_32 -attr accession cluster_32 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::SP1_HUMAN.H11MO.1.A' -set_attr merged_ID 'SP1_HUMAN.H11MO.1.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_32/cluster_32_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_33/cluster_33_matrices_temp.tf -from tf -to tf  -attr name cluster_33 -attr accession cluster_33 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::SP4_HUMAN.H11MO.1.A' -set_attr merged_ID 'SP4_HUMAN.H11MO.1.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_33/cluster_33_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_32/cluster_32_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_33/cluster_33_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m56_VEZF1_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_34/cluster_34_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m58_WT1_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_35/cluster_35_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m52_TBX15_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_36/cluster_36_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_34/cluster_34_matrices_temp.tf -from tf -to tf  -attr name cluster_34 -attr accession cluster_34 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::VEZF1_HUMAN.H11MO.0.C' -set_attr merged_ID 'VEZF1_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_34/cluster_34_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_35/cluster_35_matrices_temp.tf -from tf -to tf  -attr name cluster_35 -attr accession cluster_35 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::WT1_HUMAN.H11MO.0.C' -set_attr merged_ID 'WT1_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_35/cluster_35_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_36/cluster_36_matrices_temp.tf -from tf -to tf  -attr name cluster_36 -attr accession cluster_36 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::TBX15_HUMAN.H11MO.0.D' -set_attr merged_ID 'TBX15_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_36/cluster_36_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_35/cluster_35_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_34/cluster_34_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_36/cluster_36_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m9_EGR2_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_37/cluster_37_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m19_KLF15_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_38/cluster_38_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_37/cluster_37_matrices_temp.tf -from tf -to tf  -attr name cluster_37 -attr accession cluster_37 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::EGR2_HUMAN.H11MO.0.A' -set_attr merged_ID 'EGR2_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_37/cluster_37_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_38/cluster_38_matrices_temp.tf -from tf -to tf  -attr name cluster_38 -attr accession cluster_38 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::KLF15_HUMAN.H11MO.0.A' -set_attr merged_ID 'KLF15_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_38/cluster_38_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_37/cluster_37_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_38/cluster_38_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m23_KLF4_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_39/cluster_39_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m64_ZN263_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_40/cluster_40_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m38_REST_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m73_REST_HUMAN.H11MO.0.A_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_1/cluster_4_node_1_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_39/cluster_39_matrices_temp.tf -from tf -to tf  -attr name cluster_39 -attr accession cluster_39 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::KLF4_HUMAN.H11MO.0.A' -set_attr merged_ID 'KLF4_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_39/cluster_39_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_40/cluster_40_matrices_temp.tf -from tf -to tf  -attr name cluster_40 -attr accession cluster_40 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZN263_HUMAN.H11MO.0.A' -set_attr merged_ID 'ZN263_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_40/cluster_40_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_1/cluster_4_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc mean -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_1/cluster_4_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_39/cluster_39_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_1/cluster_4_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/IC_test_2026-05-11.153612_VmY6un


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_40/cluster_40_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_1/cluster_4_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m25_KLF6_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_41/cluster_41_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m20_KLF16_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_42/cluster_42_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_41/cluster_41_matrices_temp.tf -from tf -to tf  -attr name cluster_41 -attr accession cluster_41 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::KLF6_HUMAN.H11MO.0.A' -set_attr merged_ID 'KLF6_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_41/cluster_41_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_42/cluster_42_matrices_temp.tf -from tf -to tf  -attr name cluster_42 -attr accession cluster_42 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::KLF16_HUMAN.H11MO.0.D' -set_attr merged_ID 'KLF16_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_42/cluster_42_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_41/cluster_41_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_42/cluster_42_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m43_SP1_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_43/cluster_43_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m80_REST_m4_GM12878_encode_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_44/cluster_44_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m83_REST_m9_HTB-11_encode_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_45/cluster_45_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_43/cluster_43_matrices_temp.tf -from tf -to tf  -attr name cluster_43 -attr accession cluster_43 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::SP1_HUMAN.H11MO.0.A' -set_attr merged_ID 'SP1_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_43/cluster_43_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_44/cluster_44_matrices_temp.tf -from tf -to tf  -attr name cluster_44 -attr accession cluster_44 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::REST_m4_GM12878_encode' -set_attr merged_ID 'REST_m4_GM12878_encode' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_44/cluster_44_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_45/cluster_45_matrices_temp.tf -from tf -to tf  -attr name cluster_45 -attr accession cluster_45 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::REST_m9_HTB-11_encode' -set_attr merged_ID 'REST_m9_HTB-11_encode' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_45/cluster_45_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_45/cluster_45_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_44/cluster_44_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_43/cluster_43_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m53_TBX1_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_46/cluster_46_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m33_PATZ1_HUMAN.H11MO.1.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_47/cluster_47_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m57_VEZF1_HUMAN.H11MO.1.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_48/cluster_48_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_46/cluster_46_matrices_temp.tf -from tf -to tf  -attr name cluster_46 -attr accession cluster_46 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::TBX1_HUMAN.H11MO.0.D' -set_attr merged_ID 'TBX1_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_46/cluster_46_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_47/cluster_47_matrices_temp.tf -from tf -to tf  -attr name cluster_47 -attr accession cluster_47 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::PATZ1_HUMAN.H11MO.1.C' -set_attr merged_ID 'PATZ1_HUMAN.H11MO.1.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_47/cluster_47_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_48/cluster_48_matrices_temp.tf -from tf -to tf  -attr name cluster_48 -attr accession cluster_48 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::VEZF1_HUMAN.H11MO.1.C' -set_attr merged_ID 'VEZF1_HUMAN.H11MO.1.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_48/cluster_48_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_48/cluster_48_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_46/cluster_46_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_47/cluster_47_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m59_ZBT17_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_49/cluster_49_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m4_E2F1_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_5/cluster_5_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m11_EGR4_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_50/cluster_50_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_49/cluster_49_matrices_temp.tf -from tf -to tf  -attr name cluster_49 -attr accession cluster_49 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZBT17_HUMAN.H11MO.0.A' -set_attr merged_ID 'ZBT17_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_49/cluster_49_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_5/cluster_5_matrices_temp.tf -from tf -to tf  -attr name cluster_5 -attr accession cluster_5 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::E2F1_HUMAN.H11MO.0.A' -set_attr merged_ID 'E2F1_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_5/cluster_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_50/cluster_50_matrices_temp.tf -from tf -to tf  -attr name cluster_50 -attr accession cluster_50 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::EGR4_HUMAN.H11MO.0.D' -set_attr merged_ID 'EGR4_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_50/cluster_50_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_50/cluster_50_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_5/cluster_5_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_49/cluster_49_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m63_ZN219_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_51/cluster_51_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m69_ZN740_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_52/cluster_52_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m82_REST_m8_HeLa-S3_encode_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_53/cluster_53_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_51/cluster_51_matrices_temp.tf -from tf -to tf  -attr name cluster_51 -attr accession cluster_51 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZN219_HUMAN.H11MO.0.D' -set_attr merged_ID 'ZN219_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_51/cluster_51_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_52/cluster_52_matrices_temp.tf -from tf -to tf  -attr name cluster_52 -attr accession cluster_52 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZN740_HUMAN.H11MO.0.D' -set_attr merged_ID 'ZN740_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_52/cluster_52_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_53/cluster_53_matrices_temp.tf -from tf -to tf  -attr name cluster_53 -attr accession cluster_53 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::REST_m8_HeLa-S3_encode' -set_attr merged_ID 'REST_m8_HeLa-S3_encode' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_53/cluster_53_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_52/cluster_52_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_53/cluster_53_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_51/cluster_51_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m77_REST_m1_GM12878_encode_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_54/cluster_54_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m42_SALL4_HUMAN.H11MO.0.B_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_55/cluster_55_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m1_AP2B_HUMAN.H11MO.0.B_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_56/cluster_56_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_54/cluster_54_matrices_temp.tf -from tf -to tf  -attr name cluster_54 -attr accession cluster_54 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::REST_m1_GM12878_encode' -set_attr merged_ID 'REST_m1_GM12878_encode' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_54/cluster_54_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_55/cluster_55_matrices_temp.tf -from tf -to tf  -attr name cluster_55 -attr accession cluster_55 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::SALL4_HUMAN.H11MO.0.B' -set_attr merged_ID 'SALL4_HUMAN.H11MO.0.B' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_55/cluster_55_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_56/cluster_56_matrices_temp.tf -from tf -to tf  -attr name cluster_56 -attr accession cluster_56 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::AP2B_HUMAN.H11MO.0.B' -set_attr merged_ID 'AP2B_HUMAN.H11MO.0.B' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_56/cluster_56_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_54/cluster_54_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_56/cluster_56_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_55/cluster_55_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m2_AP2D_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_57/cluster_57_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m37_PURA_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_58/cluster_58_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m67_ZN341_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_59/cluster_59_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_57/cluster_57_matrices_temp.tf -from tf -to tf  -attr name cluster_57 -attr accession cluster_57 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::AP2D_HUMAN.H11MO.0.D' -set_attr merged_ID 'AP2D_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_57/cluster_57_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_58/cluster_58_matrices_temp.tf -from tf -to tf  -attr name cluster_58 -attr accession cluster_58 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::PURA_HUMAN.H11MO.0.D' -set_attr merged_ID 'PURA_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_58/cluster_58_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_59/cluster_59_matrices_temp.tf -from tf -to tf  -attr name cluster_59 -attr accession cluster_59 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZN341_HUMAN.H11MO.0.C' -set_attr merged_ID 'ZN341_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_59/cluster_59_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_59/cluster_59_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_57/cluster_57_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_58/cluster_58_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m54_TFDP1_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_6/cluster_6_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m70_ZN770_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_60/cluster_60_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m51_TAF1_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_61/cluster_61_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_6/cluster_6_matrices_temp.tf -from tf -to tf  -attr name cluster_6 -attr accession cluster_6 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::TFDP1_HUMAN.H11MO.0.C' -set_attr merged_ID 'TFDP1_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_6/cluster_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_60/cluster_60_matrices_temp.tf -from tf -to tf  -attr name cluster_60 -attr accession cluster_60 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZN770_HUMAN.H11MO.0.C' -set_attr merged_ID 'ZN770_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_60/cluster_60_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_61/cluster_61_matrices_temp.tf -from tf -to tf  -attr name cluster_61 -attr accession cluster_61 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::TAF1_HUMAN.H11MO.0.A' -set_attr merged_ID 'TAF1_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_61/cluster_61_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_60/cluster_60_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_61/cluster_61_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_6/cluster_6_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m72_ZSC22_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_62/cluster_62_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m41_RXRA_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_63/cluster_63_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m61_ZFX_HUMAN.H11MO.1.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_64/cluster_64_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_62/cluster_62_matrices_temp.tf -from tf -to tf  -attr name cluster_62 -attr accession cluster_62 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZSC22_HUMAN.H11MO.0.C' -set_attr merged_ID 'ZSC22_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_62/cluster_62_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_63/cluster_63_matrices_temp.tf -from tf -to tf  -attr name cluster_63 -attr accession cluster_63 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::RXRA_HUMAN.H11MO.0.A' -set_attr merged_ID 'RXRA_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_63/cluster_63_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_64/cluster_64_matrices_temp.tf -from tf -to tf  -attr name cluster_64 -attr accession cluster_64 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZFX_HUMAN.H11MO.1.A' -set_attr merged_ID 'ZFX_HUMAN.H11MO.1.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_64/cluster_64_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_62/cluster_62_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_63/cluster_63_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_64/cluster_64_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m60_ZF64A_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_65/cluster_65_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m66_ZN320_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_66/cluster_66_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m36_PROX1_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_67/cluster_67_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_65/cluster_65_matrices_temp.tf -from tf -to tf  -attr name cluster_65 -attr accession cluster_65 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZF64A_HUMAN.H11MO.0.D' -set_attr merged_ID 'ZF64A_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_65/cluster_65_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_66/cluster_66_matrices_temp.tf -from tf -to tf  -attr name cluster_66 -attr accession cluster_66 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZN320_HUMAN.H11MO.0.C' -set_attr merged_ID 'ZN320_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_66/cluster_66_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_67/cluster_67_matrices_temp.tf -from tf -to tf  -attr name cluster_67 -attr accession cluster_67 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::PROX1_HUMAN.H11MO.0.D' -set_attr merged_ID 'PROX1_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_67/cluster_67_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_65/cluster_65_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_66/cluster_66_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_67/cluster_67_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m81_REST_m5_HepG2_encode_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_68/cluster_68_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m29_MBD2_HUMAN.H11MO.0.B_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_69/cluster_69_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m21_KLF1_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_7/cluster_7_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_68/cluster_68_matrices_temp.tf -from tf -to tf  -attr name cluster_68 -attr accession cluster_68 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::REST_m5_HepG2_encode' -set_attr merged_ID 'REST_m5_HepG2_encode' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_68/cluster_68_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_69/cluster_69_matrices_temp.tf -from tf -to tf  -attr name cluster_69 -attr accession cluster_69 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::MBD2_HUMAN.H11MO.0.B' -set_attr merged_ID 'MBD2_HUMAN.H11MO.0.B' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_69/cluster_69_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_7/cluster_7_matrices_temp.tf -from tf -to tf  -attr name cluster_7 -attr accession cluster_7 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::KLF1_HUMAN.H11MO.0.A' -set_attr merged_ID 'KLF1_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_7/cluster_7_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_68/cluster_68_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_69/cluster_69_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_7/cluster_7_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m78_REST_m2_U87_encode_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_70/cluster_70_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m12_FLI1_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_71/cluster_71_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m50_SPIC_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_72/cluster_72_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_70/cluster_70_matrices_temp.tf -from tf -to tf  -attr name cluster_70 -attr accession cluster_70 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::REST_m2_U87_encode' -set_attr merged_ID 'REST_m2_U87_encode' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_70/cluster_70_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_71/cluster_71_matrices_temp.tf -from tf -to tf  -attr name cluster_71 -attr accession cluster_71 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::FLI1_HUMAN.H11MO.0.A' -set_attr merged_ID 'FLI1_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_71/cluster_71_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_72/cluster_72_matrices_temp.tf -from tf -to tf  -attr name cluster_72 -attr accession cluster_72 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::SPIC_HUMAN.H11MO.0.D' -set_attr merged_ID 'SPIC_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_72/cluster_72_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_71/cluster_71_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_70/cluster_70_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_72/cluster_72_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m35_PLAG1_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_73/cluster_73_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m3_CTCFL_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_74/cluster_74_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m39_RFX1_HUMAN.H11MO.0.B_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_75/cluster_75_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_73/cluster_73_matrices_temp.tf -from tf -to tf  -attr name cluster_73 -attr accession cluster_73 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::PLAG1_HUMAN.H11MO.0.D' -set_attr merged_ID 'PLAG1_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_73/cluster_73_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_74/cluster_74_matrices_temp.tf -from tf -to tf  -attr name cluster_74 -attr accession cluster_74 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::CTCFL_HUMAN.H11MO.0.A' -set_attr merged_ID 'CTCFL_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_74/cluster_74_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_75/cluster_75_matrices_temp.tf -from tf -to tf  -attr name cluster_75 -attr accession cluster_75 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::RFX1_HUMAN.H11MO.0.B' -set_attr merged_ID 'RFX1_HUMAN.H11MO.0.B' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_75/cluster_75_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_73/cluster_73_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_74/cluster_74_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_75/cluster_75_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m55_THAP1_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_76/cluster_76_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m79_REST_m3_PFSK-1_encode_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_77/cluster_77_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m13_HEY2_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_78/cluster_78_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_76/cluster_76_matrices_temp.tf -from tf -to tf  -attr name cluster_76 -attr accession cluster_76 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::THAP1_HUMAN.H11MO.0.C' -set_attr merged_ID 'THAP1_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_76/cluster_76_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_77/cluster_77_matrices_temp.tf -from tf -to tf  -attr name cluster_77 -attr accession cluster_77 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::REST_m3_PFSK-1_encode' -set_attr merged_ID 'REST_m3_PFSK-1_encode' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_77/cluster_77_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_78/cluster_78_matrices_temp.tf -from tf -to tf  -attr name cluster_78 -attr accession cluster_78 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::HEY2_HUMAN.H11MO.0.D' -set_attr merged_ID 'HEY2_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_78/cluster_78_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_78/cluster_78_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_77/cluster_77_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_76/cluster_76_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m40_RREB1_HUMAN.H11MO.0.D_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_79/cluster_79_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m24_KLF5_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_8/cluster_8_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m30_NR1H4_HUMAN.H11MO.0.B_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_80/cluster_80_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_79/cluster_79_matrices_temp.tf -from tf -to tf  -attr name cluster_79 -attr accession cluster_79 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::RREB1_HUMAN.H11MO.0.D' -set_attr merged_ID 'RREB1_HUMAN.H11MO.0.D' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_79/cluster_79_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_8/cluster_8_matrices_temp.tf -from tf -to tf  -attr name cluster_8 -attr accession cluster_8 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::KLF5_HUMAN.H11MO.0.A' -set_attr merged_ID 'KLF5_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_8/cluster_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_80/cluster_80_matrices_temp.tf -from tf -to tf  -attr name cluster_80 -attr accession cluster_80 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::NR1H4_HUMAN.H11MO.0.B' -set_attr merged_ID 'NR1H4_HUMAN.H11MO.0.B' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_80/cluster_80_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_8/cluster_8_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_80/cluster_80_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_79/cluster_79_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m34_PAX5_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_81/cluster_81_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m71_ZNF76_HUMAN.H11MO.0.C_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_82/cluster_82_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m31_NRF1_HUMAN.H11MO.0.A_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_83/cluster_83_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_81/cluster_81_matrices_temp.tf -from tf -to tf  -attr name cluster_81 -attr accession cluster_81 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::PAX5_HUMAN.H11MO.0.A' -set_attr merged_ID 'PAX5_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_81/cluster_81_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_83/cluster_83_matrices_temp.tf -from tf -to tf  -attr name cluster_83 -attr accession cluster_83 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::NRF1_HUMAN.H11MO.0.A' -set_attr merged_ID 'NRF1_HUMAN.H11MO.0.A' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_83/cluster_83_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_82/cluster_82_matrices_temp.tf -from tf -to tf  -attr name cluster_82 -attr accession cluster_82 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::ZNF76_HUMAN.H11MO.0.C' -set_attr merged_ID 'ZNF76_HUMAN.H11MO.0.C' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_82/cluster_82_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_81/cluster_81_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_83/cluster_83_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_82/cluster_82_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/defaut_w_cor_ncor_0_8_miniatura_motifs_m84_REST_m11_known_matrix_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_9/cluster_9_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_9/cluster_9_matrices_temp.tf -from tf -to tf  -attr name cluster_9 -attr accession cluster_9 -set_attr merged_AC 'defaut_w_cor_ncor_0_8_miniatura_motifs:::REST_m11_known_matrix' -set_attr merged_ID 'REST_m11_known_matrix' -set_attr type merge -set_attr merge_type mean -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_9/cluster_9_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_clusters_information/cluster_9/cluster_9_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


rm -r /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_pairwise_compa_logos


cp /var/www/html/rsat/public_html/templates_html/display_d3_tree.html /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_logo_tree.html


cp /var/www/html/rsat/public_html/templates_html/display_small_d3_tree.html /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_portable_logo_tree.html


mv /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_temporary.html /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_logo_tree.html


mv /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_temporary_2.html /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_portable_logo_tree.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/pairwise_compa_matrix_descriptions.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_html/pairwise_compa_matrix_descriptions.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/distance_table.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/distance_table.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/alignment_table.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/alignment_table.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/clusters.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/clusters.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/clusters_motif_names.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/clusters_motif_names.html


mv -f /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_temporary_2.html /var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_portable_logo_tree.html
; matrix-clustering  -v 1 -max_matrices 300 -matrix defaut_w_cor_ncor_0_8_miniatura_motifs $RSAT/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_query_matrices.mscan mscan -hclust_method average -calc mean -title defaut_w_cor_ncor_0_8_miniatura_motifs -metric_build_tree Ncor -lth w 5 -lth cor 0.6 -lth Ncor 0.8 -uth Ncor 1 -quick -label_in_tree name -return json,heatmap -o $RSAT/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering
; Program version       	1.05
; Number of matrices          	87
; Output files
;	motif_richness_barplot_html 	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_motif_richness_barplot.html
;	dynamic_heatmap_html        	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_dynamic_heatmap.html
;	root_motifs_table           	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_root_motifs_table.tab
;	small_logo_cladogram_html   	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_portable_logo_tree.html
;	small_forest_export         	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_small_forest.html
;	percent_table               	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/clusters_summary_percent_table.tab
;	summary                     	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_SUMMARY.html
;	hexa_colors                 	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_hexa_colors.txt
;	pairwise_compa_html         	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_html/pairwise_compa.html
;	dynamic_coverage_heatmap_html	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_dynamic_coverage_heatmap.html
;	temp_html                   	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_temporary.html
;	internal_nodes_attributes_table	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/internal_nodes_attributes.tab
;	clusters_table              	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/clusters.tab
;	radial_tree_template        	/var/www/html/rsat/public_html/templates_html/Radial_tree_template.html
;	int_align                   	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/intermediate_alignments.tab
;	clusters_table_motif_names_html	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/clusters_motif_names.html
;	archive                     	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_archive.zip
;	central_motifs_IDs_temp     	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_central_motifs_IDs_temporal.tab
;	html_index                  	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_html/index.html
;	matrix_descriptions         	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/pairwise_compa_matrix_descriptions.tab
;	log                         	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_log.txt
;	central_motifs              	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_central_motifs_IDs.tab
;	motif_file                  	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf
;	prefix                      	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering
;	Rlog                        	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_Rlog.txt
;	pairwise_compa              	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/pairwise_compa.tab
;	clusters_table_motif_names  	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/clusters_motif_names.tab
;	heatmap_coverage_d3         	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/convergency_heatmap_tab.tsv
;	clusters_table_html         	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/clusters.html
;	cluster_IDs_names           	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_cluster_IDs.txt
;	temp_html_2                 	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_temporary_2.html
;	radial_tree                 	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_radial_tree.html
;	matrix_descriptions_html    	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_html/pairwise_compa_matrix_descriptions.html
;	alignment_table             	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/alignment_table.tab
;	nb_clusters_table           	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/number_of_clusters.tab
;	logo_cladogram_html         	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_logo_tree.html
;	heatmap_pdf                 	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_figures/heatmap.pdf
;	consensus_cladogram_json    	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_trees/tree.json
;	coverage_table              	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/clusters_summary_coverage_contingency_table.tab
;	summary_temp                	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_SUMMARY_TEMP.html
;	reference_compa             	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/Root_vs_reference_collection_compa.tab
;	distance_table_html         	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/distance_table.html
;	heatmap_collections_d3      	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/collection_heatmap_tab.tsv
;	central_motifs_tf           	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_central_motifs_transfac.tf
;	motif_richness_tsv          	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_motif_richness.tsv
;	heatmap_collections_attributes	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/collection_heatmap_order.tab
;	alignment_table_html        	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/alignment_table.html
;	all_concatenated_motifs     	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_aligned_logos/All_concatenated_motifs.tf
;	root_motifs                 	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_cluster_root_motifs.tf
;	input_matrices              	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data/input_motifs_processed.tf
;	heatmap_coverage_attributes 	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/convergency_heatmap_attributes.tab
;	coverage_json_folder        	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_coverage_json
;	reference_compa_html        	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_html/Root_vs_reference_collection_compa.html
;	distance_table              	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/distance_table.tab
;	ref_collection_tf           	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_reference_collection.tf
;	err_log                     	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_errors.txt
;	temp_html_3                 	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_temporary_3.html
;	heatmap_jpg                 	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_figures/heatmap.jpg
;	cluster_summary_table       	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_tables/clusters_summary_table.tab
; Directories
;	data                        	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT/matrix-clustering_data
;	output                      	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/matrix-clustering_2026-05-11.153532_Kh2ndT
; Host name	rsat
; Job started	2026-05-11.153532
; Job done	2026-05-11.153633
; Seconds	1.39
;	user	1.39
;	system	1.02
;	cuser	92.45
;	csystem	23.71