AC assembly_1 XX ID assembly_1 XX DE wacATATATAwaw P0 a c g t 1 94 64 41 138 2 131 60 68 78 3 26 215 20 76 4 292 8 15 22 5 15 11 2 309 6 311 8 6 12 7 6 7 4 320 8 313 5 3 16 9 12 7 3 315 10 323 2 6 6 11 85 62 42 148 12 135 50 81 71 13 100 68 51 118 XX CC program: feature CC matrix.nb: 1 CC matrix.nb: 1 CC sites: 337 CC consensus.strict: tacATATATAtat CC consensus.strict.rc: ATATATATATGTA CC consensus.IUPAC: wacATATATAwaw CC consensus.IUPAC.rc: WTWTATATATGTW CC consensus.regexp: [at]acATATATA[at]a[at] CC consensus.regexp.rc: [AT]T[AT]TATATATGT[AT] XX // AC assembly_2 XX ID assembly_2 XX DE ttyTTTTyTTTTtt P0 a c g t 1 198 143 125 377 2 206 179 91 367 3 78 488 56 221 4 44 55 15 729 5 33 41 28 741 6 24 38 18 763 7 34 51 25 733 8 51 493 42 257 9 26 50 26 741 10 35 46 19 743 11 46 40 25 732 12 44 48 31 720 13 128 185 128 402 14 152 168 118 405 XX CC program: feature CC matrix.nb: 2 CC matrix.nb: 2 CC sites: 843 CC consensus.strict: ttcTTTTcTTTTtt CC consensus.strict.rc: AAAAAAGAAAAGAA CC consensus.IUPAC: ttyTTTTyTTTTtt CC consensus.IUPAC.rc: AAAAAARAAAARAA CC consensus.regexp: tt[ct]TTTT[ct]TTTTtt CC consensus.regexp.rc: AAAAAA[AG]AAAA[AG]AA XX // AC assembly_3 XX ID assembly_3 XX DE htATCAAGwa P0 a c g t 1 28 21 13 22 2 19 19 17 29 3 84 0 0 0 4 0 0 0 84 5 0 84 0 0 6 84 0 0 0 7 84 0 0 0 8 0 0 84 0 9 27 17 19 21 10 36 12 17 19 XX CC program: feature CC matrix.nb: 3 CC matrix.nb: 3 CC sites: 84 CC consensus.strict: atATCAAGaa CC consensus.strict.rc: TTCTTGATAT CC consensus.IUPAC: htATCAAGwa CC consensus.IUPAC.rc: TWCTTGATAD CC consensus.regexp: [act]tATCAAG[at]a CC consensus.regexp.rc: T[AT]CTTGATA[AGT] XX // AC assembly_4 XX ID assembly_4 XX DE wtTTTTyTTTTyTTkTTtt P0 a c g t 1 120 89 49 217 2 80 101 55 239 3 40 37 20 378 4 26 29 18 402 5 25 40 19 391 6 23 44 18 390 7 40 225 40 170 8 19 35 13 408 9 18 27 12 418 10 24 28 12 411 11 29 30 17 399 12 29 256 31 159 13 16 41 19 399 14 18 31 20 406 15 62 92 146 175 16 47 37 29 362 17 39 38 28 370 18 95 93 64 223 19 103 99 66 207 XX CC program: feature CC matrix.nb: 4 CC matrix.nb: 4 CC sites: 475 CC consensus.strict: ttTTTTcTTTTcTTtTTtt CC consensus.strict.rc: AAAAAAAGAAAAGAAAAAA CC consensus.IUPAC: wtTTTTyTTTTyTTkTTtt CC consensus.IUPAC.rc: AAAAMAARAAAARAAAAAW CC consensus.regexp: [at]tTTTT[ct]TTTT[ct]TT[gt]TTtt CC consensus.regexp.rc: AAAA[AC]AA[AG]AAAA[AG]AAAAA[AT] XX // AC assembly_5 XX ID assembly_5 XX DE wwGAAAATGAaa P0 a c g t 1 97 34 48 61 2 98 30 47 65 3 15 11 204 10 4 230 2 3 5 5 222 7 5 6 6 220 1 10 9 7 213 5 7 15 8 27 6 21 186 9 19 3 207 11 10 218 12 7 3 11 109 41 36 54 12 106 38 39 57 XX CC program: feature CC matrix.nb: 5 CC matrix.nb: 5 CC sites: 240 CC consensus.strict: aaGAAAATGAaa CC consensus.strict.rc: TTTCATTTTCTT CC consensus.IUPAC: wwGAAAATGAaa CC consensus.IUPAC.rc: TTTCATTTTCWW CC consensus.regexp: [at][at]GAAAATGAaa CC consensus.regexp.rc: TTTCATTTTC[AT][AT] XX // AC assembly_6 XX ID assembly_6 XX DE wtTCCTTTTctt P0 a c g t 1 91 71 42 142 2 80 68 50 148 3 5 10 6 325 4 15 284 6 41 5 20 293 6 27 6 7 7 6 326 7 4 8 4 330 8 5 8 4 329 9 38 25 26 257 10 25 230 24 67 11 79 73 56 138 12 79 71 52 144 XX CC program: feature CC matrix.nb: 6 CC matrix.nb: 6 CC sites: 346 CC consensus.strict: ttTCCTTTTctt CC consensus.strict.rc: AAGAAAAGGAAA CC consensus.IUPAC: wtTCCTTTTctt CC consensus.IUPAC.rc: AAGAAAAGGAAW CC consensus.regexp: [at]tTCCTTTTctt CC consensus.regexp.rc: AAGAAAAGGAA[AT] XX // AC assembly_7 XX ID assembly_7 XX DE waAAGGAAra P0 a c g t 1 59 33 21 42 2 60 23 36 36 3 155 0 0 0 4 155 0 0 0 5 0 0 155 0 6 0 0 155 0 7 155 0 0 0 8 155 0 0 0 9 75 14 39 27 10 62 24 36 33 XX CC program: feature CC matrix.nb: 7 CC matrix.nb: 7 CC sites: 155 CC consensus.strict: aaAAGGAAaa CC consensus.strict.rc: TTTTCCTTTT CC consensus.IUPAC: waAAGGAAra CC consensus.IUPAC.rc: TYTTCCTTTW CC consensus.regexp: [at]aAAGGAA[ag]a CC consensus.regexp.rc: T[CT]TTCCTTT[AT] XX // AC assembly_8 XX ID assembly_8 XX DE ttTTTTTTTytt P0 a c g t 1 184 158 91 415 2 159 156 93 440 3 23 28 8 789 4 19 27 7 795 5 19 41 26 762 6 16 38 13 781 7 15 36 11 786 8 14 24 12 798 9 22 30 17 779 10 46 520 41 241 11 144 164 111 429 12 175 147 106 420 XX CC program: feature CC matrix.nb: 8 CC matrix.nb: 8 CC sites: 848 CC consensus.strict: ttTTTTTTTctt CC consensus.strict.rc: AAGAAAAAAAAA CC consensus.IUPAC: ttTTTTTTTytt CC consensus.IUPAC.rc: AARAAAAAAAAA CC consensus.regexp: ttTTTTTTT[ct]tt CC consensus.regexp.rc: AA[AG]AAAAAAAAA XX // AC assembly_9 XX ID assembly_9 XX DE wacATATATAtawww P0 a c g t 1 85 60 38 130 2 124 59 57 73 3 31 194 20 68 4 266 8 13 26 5 16 17 5 275 6 273 10 11 19 7 10 5 6 292 8 293 4 2 14 9 12 8 6 287 10 295 5 7 6 11 57 37 20 199 12 187 35 46 45 13 153 45 31 84 14 122 41 66 84 15 94 54 49 116 XX CC program: feature CC matrix.nb: 9 CC matrix.nb: 9 CC sites: 313 CC consensus.strict: tacATATATAtaaat CC consensus.strict.rc: ATTTATATATATGTA CC consensus.IUPAC: wacATATATAtawww CC consensus.IUPAC.rc: WWWTATATATATGTW CC consensus.regexp: [at]acATATATAta[at][at][at] CC consensus.regexp.rc: [AT][AT][AT]TATATATATGT[AT] XX // AC assembly_10 XX ID assembly_10 XX DE aaAAGAAAar P0 a c g t 1 156 45 76 69 2 152 64 70 60 3 346 0 0 0 4 346 0 0 0 5 0 0 346 0 6 346 0 0 0 7 346 0 0 0 8 346 0 0 0 9 158 45 72 71 10 137 42 88 79 XX CC program: feature CC matrix.nb: 10 CC matrix.nb: 10 CC sites: 346 CC consensus.strict: aaAAGAAAaa CC consensus.strict.rc: TTTTTCTTTT CC consensus.IUPAC: aaAAGAAAar CC consensus.IUPAC.rc: YTTTTCTTTT CC consensus.regexp: aaAAGAAAa[ag] CC consensus.regexp.rc: [CT]TTTTCTTTT XX // AC assembly_11 XX ID assembly_11 XX DE twTTgTTTTCtt P0 a c g t 1 78 66 55 145 2 86 56 51 151 3 9 7 3 325 4 11 6 6 321 5 19 41 210 74 6 8 9 5 322 7 6 5 3 330 8 12 6 4 322 9 7 8 12 317 10 12 287 14 31 11 64 57 67 156 12 76 58 42 168 XX CC program: feature CC matrix.nb: 11 CC matrix.nb: 11 CC sites: 344 CC consensus.strict: ttTTgTTTTCtt CC consensus.strict.rc: AAGAAAACAAAA CC consensus.IUPAC: twTTgTTTTCtt CC consensus.IUPAC.rc: AAGAAAACAAWA CC consensus.regexp: t[at]TTgTTTTCtt CC consensus.regexp.rc: AAGAAAACAA[AT]A XX // AC assembly_12 XX ID assembly_12 XX DE wyGCTGCCGGtr P0 a c g t 1 8 5 2 10 2 2 8 5 10 3 2 0 22 1 4 0 25 0 0 5 0 1 1 23 6 0 0 23 2 7 1 23 1 0 8 2 22 0 1 9 3 1 21 0 10 2 0 21 2 11 6 5 5 9 12 10 3 7 5 XX CC program: feature CC matrix.nb: 12 CC matrix.nb: 12 CC sites: 25 CC consensus.strict: ttGCTGCCGGta CC consensus.strict.rc: TACCGGCAGCAA CC consensus.IUPAC: wyGCTGCCGGtr CC consensus.IUPAC.rc: YACCGGCAGCRW CC consensus.regexp: [at][ct]GCTGCCGGt[ag] CC consensus.regexp.rc: [CT]ACCGGCAGC[AG][AT] XX // AC assembly_13 XX ID assembly_13 XX DE twTTATTATww P0 a c g t 1 202 168 133 375 2 239 162 156 321 3 52 35 23 768 4 25 22 26 805 5 679 51 51 97 6 32 18 25 803 7 42 25 15 796 8 691 50 39 98 9 37 19 29 793 10 250 162 111 355 11 254 143 150 331 XX CC program: feature CC matrix.nb: 13 CC matrix.nb: 13 CC sites: 878 CC consensus.strict: ttTTATTATtt CC consensus.strict.rc: AAATAATAAAA CC consensus.IUPAC: twTTATTATww CC consensus.IUPAC.rc: WWATAATAAWA CC consensus.regexp: t[at]TTATTAT[at][at] CC consensus.regexp.rc: [AT][AT]ATAATAA[AT]A XX // AC assembly_14 XX ID assembly_14 XX DE ttCTCTTTTtt P0 a c g t 1 194 173 136 352 2 185 169 132 369 3 53 621 34 147 4 41 37 8 769 5 46 648 29 132 6 20 33 14 788 7 15 30 16 794 8 14 28 19 794 9 20 28 20 787 10 187 193 135 340 11 185 177 114 379 XX CC program: feature CC matrix.nb: 14 CC matrix.nb: 14 CC sites: 855 CC consensus.strict: ttCTCTTTTtt CC consensus.strict.rc: AAAAAAGAGAA CC consensus.IUPAC: ttCTCTTTTtt CC consensus.IUPAC.rc: AAAAAAGAGAA CC consensus.regexp: ttCTCTTTTtt CC consensus.regexp.rc: AAAAAAGAGAA XX // AC assembly_15 XX ID assembly_15 XX DE rrAAAGGGmd P0 a c g t 1 39 17 24 16 2 38 16 24 18 3 96 0 0 0 4 96 0 0 0 5 96 0 0 0 6 0 0 96 0 7 0 0 96 0 8 0 0 96 0 9 35 24 14 23 10 27 18 25 26 XX CC program: feature CC matrix.nb: 15 CC matrix.nb: 15 CC sites: 96 CC consensus.strict: aaAAAGGGaa CC consensus.strict.rc: TTCCCTTTTT CC consensus.IUPAC: rrAAAGGGmd CC consensus.IUPAC.rc: HKCCCTTTYY CC consensus.regexp: [ag][ag]AAAGGG[ac][agt] CC consensus.regexp.rc: [ACT][GT]CCCTTT[CT][CT] XX //