; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/05/11/oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/05/11/oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/05/11/oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/05/11/oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	5	6	0	25	1	0	1	24	4	25	9	10	8
c	7	7	2	1	23	0	0	0	2	0	5	4	3
g	1	7	3	0	1	26	0	1	16	1	3	8	4
t	13	6	21	0	1	0	25	1	4	0	9	4	11
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/11//oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/11//oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_logo_m1_rc.png
;
a	1	4	7	7	0	0	1	7	0	0	3	3
c	1	0	0	0	1	0	0	0	6	6	2	1
g	3	1	0	0	6	0	6	0	0	1	1	1
t	2	2	0	0	0	7	0	0	1	0	1	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/11//oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/11//oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_logo_m2_rc.png
;
a	0	0	4	0	0	0	0	0	0	0	2	2
c	0	1	0	3	0	4	0	0	4	4	0	1
g	1	1	0	1	4	0	0	0	0	0	1	0
t	3	2	0	0	0	0	4	4	0	0	1	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/11//oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/11//oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_logo_m3_rc.png
;
a	5	8	0	0	0	0	0	0	6	3
c	2	3	0	18	0	0	0	0	5	8
g	4	1	0	0	0	0	18	0	3	2
t	7	6	18	0	18	18	0	18	4	5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/11//oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/11//oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_logo_m4_rc.png
;
a	0	1	0	0	0	0	6	0	2	0	3	2
c	1	2	0	0	0	0	0	6	0	0	0	2
g	1	1	6	0	5	0	0	0	4	6	1	1
t	4	2	0	6	1	6	0	0	0	0	2	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/11//oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/11//oligo-analysis_2026-05-11.134402_yXJdC2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-05-11.134404
; Job done	2026-05-11.134406
; Seconds	0.16
;	user	0.16
;	system	0.05
;	cuser	1.28
;	csystem	0.26