One-to-n alignments

Command: compare-matrices  -v 1 -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/05/16/compare-matrices_2026-05-16.152607_AFb8WK/compare-matrices_query_matrices.transfac -file2 $RSAT/public_html/motif_databases/footprintDB/footprintDB.plants.motif.tf -format2 tf -strand DR -lth cor 0.7 -lth Ncor 0.4 -uth match_rank 50 -return cor,Ncor,logoDP,NsEucl,NSW,match_rank,matrix_id,matrix_name,width,strand,offset,consensus,alignments_1ton -o $RSAT/public_html/tmp/www-data/2026/05/16/compare-matrices_2026-05-16.152607_AFb8WK/compare-matrices.tab

One-to-n matrix alignment; reference matrix: 1_m6_assembly_6_shift6 ; 129 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
1_m6_assembly_6_shift6 (assembly_6)
; 1_m6_assembly_6 (assembly_6); m=0 (reference); ncol1=10; shift=6; ncol=16; ------wwAATAATww ; Alignment reference a 0 0 0 0 0 0 381 319 869 869 0 869 869 0 334 332 c 0 0 0 0 0 0 127 150 0 0 0 0 0 0 114 129 g 0 0 0 0 0 0 129 108 0 0 0 0 0 0 131 105 t 0 0 0 0 0 0 232 292 0 0 869 0 0 869 290 303

ATHB13_MA1212.1_JASPAR_shift6 (ATHB13:MA1212.1:JASPAR) 0.927 0.843 10.536 0.941 0.965 8 3 10 4 5 6.000 1
; 1_m6_assembly_6 versus ATHB13_MA1212.1_JASPAR (ATHB13:MA1212.1:JASPAR); m=1/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 6; ------tyAATAATTr ; cor=0.927; Ncor=0.843; logoDP=10.536; NsEucl=0.941; NSW=0.965; rcor=8; rNcor=3; rlogoDP=10; rNsEucl=4; rNSW=5; rank_mean=6.000; match_rank=1 a 0 0 0 0 0 0 137 90 600 599 0 484 600 0 63 201 c 0 0 0 0 0 0 147 295 0 0 0 109 0 2 2 70 g 0 0 0 0 0 0 70 0 0 0 0 1 0 0 48 187 t 0 0 0 0 0 0 246 215 0 1 600 6 0 598 487 142

HAT5.DAP_M0442_AthalianaCistrome_shift6 (HAT5.DAP:M0442:AthalianaCistrome) 0.920 0.836 11.246 0.936 0.960 13 6 1 8 12 8.000 2
; 1_m6_assembly_6 versus HAT5.DAP_M0442_AthalianaCistrome (HAT5.DAP:M0442:AthalianaCistrome); m=2/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 8; ------wyAATAATTr ; cor=0.920; Ncor=0.836; logoDP=11.246; NsEucl=0.936; NSW=0.960; rcor=13; rNcor=6; rlogoDP=1; rNsEucl=8; rNSW=12; rank_mean=8.000; match_rank=2 a 0 0 0 0 0 0 195 121 596 596 0 579 596 1 27 154 c 0 0 0 0 0 0 131 316 0 0 0 0 0 0 0 68 g 0 0 0 0 0 0 75 0 0 0 3 9 0 0 45 279 t 0 0 0 0 0 0 195 159 0 0 593 8 0 595 524 95

HB22_B73_1_m1_EEAD0403_EEADannot_shift6 (HB22_B73_1_m1:EEAD0403:EEADannot) 0.923 0.839 10.094 0.940 0.964 9 4 15 6 7 8.200 3
; 1_m6_assembly_6 versus HB22_B73_1_m1_EEAD0403_EEADannot (HB22_B73_1_m1:EEAD0403:EEADannot); m=3/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 8.2; ------hyAATAATka ; cor=0.923; Ncor=0.839; logoDP=10.094; NsEucl=0.940; NSW=0.964; rcor=9; rNcor=4; rlogoDP=15; rNsEucl=6; rNSW=7; rank_mean=8.200; match_rank=3 a 0 0 0 0 0 0 26 13 100 99 0 70 100 0 7 40 c 0 0 0 0 0 0 28 56 0 0 0 5 0 0 0 21 g 0 0 0 0 0 0 15 2 0 1 0 23 0 0 27 24 t 0 0 0 0 0 0 31 29 0 0 100 2 0 100 66 15

ATHB-13_MA1212.2_JASPAR_shift7 (ATHB-13:MA1212.2:JASPAR) 0.940 0.752 10.532 0.934 0.965 5 29 11 9 6 12.000 4
; 1_m6_assembly_6 versus ATHB-13_MA1212.2_JASPAR (ATHB-13:MA1212.2:JASPAR); m=4/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 12; -------yAATAATT- ; cor=0.940; Ncor=0.752; logoDP=10.532; NsEucl=0.934; NSW=0.965; rcor=5; rNcor=29; rlogoDP=11; rNsEucl=9; rNSW=6; rank_mean=12.000; match_rank=4 a 0 0 0 0 0 0 0 90 600 599 0 484 600 0 63 0 c 0 0 0 0 0 0 0 295 0 0 0 109 0 2 2 0 g 0 0 0 0 0 0 0 0 0 0 0 1 0 0 48 0 t 0 0 0 0 0 0 0 215 0 1 600 6 0 598 487 0

HB102_B73_1_m1_EEAD0393_EEADannot_shift7 (HB102_B73_1_m1:EEAD0393:EEADannot) 0.938 0.767 9.898 0.941 0.969 6 24 23 5 3 12.200 5
; 1_m6_assembly_6 versus HB102_B73_1_m1_EEAD0393_EEADannot (HB102_B73_1_m1:EEAD0393:EEADannot); m=5/128; ncol2=10; w=0; offset=1; strand=D; shift=7; score= 12.2; -------yAATAATka ; cor=0.938; Ncor=0.767; logoDP=9.898; NsEucl=0.941; NSW=0.969; rcor=6; rNcor=24; rlogoDP=23; rNsEucl=5; rNSW=3; rank_mean=12.200; match_rank=5 a 0 0 0 0 0 0 0 14 99 99 0 68 100 0 8 34 c 0 0 0 0 0 0 0 52 0 0 0 8 0 0 0 23 g 0 0 0 0 0 0 0 4 1 1 0 21 0 0 37 19 t 0 0 0 0 0 0 0 30 0 0 100 3 0 100 55 24

LOC_Os10g26500.1_HOMEOBOX_1_AT1G69780_EEAD0639_EEADannot_shift6 (LOC_Os10g26500.1_HOMEOBOX_1_AT1G69780:EEAD0639:EEADannot) 0.902 0.820 10.573 0.931 0.952 18 8 9 12 16 12.600 6
; 1_m6_assembly_6 versus LOC_Os10g26500.1_HOMEOBOX_1_AT1G69780_EEAD0639_EEADannot (LOC_Os10g26500.1_HOMEOBOX_1_AT1G69780:EEAD0639:EEADannot); m=6/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 12.6; ------tyAATAATTr ; cor=0.902; Ncor=0.820; logoDP=10.573; NsEucl=0.931; NSW=0.952; rcor=18; rNcor=8; rlogoDP=9; rNsEucl=12; rNSW=16; rank_mean=12.600; match_rank=6 a 0 0 0 0 0 0 18 18 100 99 0 81 100 0 7 25 c 0 0 0 0 0 0 16 46 0 0 0 19 0 0 0 2 g 0 0 0 0 0 0 8 2 0 0 0 0 0 0 9 52 t 0 0 0 0 0 0 58 34 0 1 100 0 0 100 84 21

ATHB20_MA1209.1_JASPAR_shift6 (ATHB20:MA1209.1:JASPAR) 0.898 0.816 11.185 0.927 0.947 20 10 4 15 23 14.400 7
; 1_m6_assembly_6 versus ATHB20_MA1209.1_JASPAR (ATHB20:MA1209.1:JASPAR); m=7/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 14.4; ------hyAATAATTr ; cor=0.898; Ncor=0.816; logoDP=11.185; NsEucl=0.927; NSW=0.947; rcor=20; rNcor=10; rlogoDP=4; rNsEucl=15; rNSW=23; rank_mean=14.400; match_rank=7 a 0 0 0 0 0 0 58 30 230 230 0 218 230 0 0 71 c 0 0 0 0 0 0 59 115 0 0 0 0 0 0 1 19 g 0 0 0 0 0 0 23 2 0 0 0 9 0 0 0 110 t 0 0 0 0 0 0 90 83 0 0 230 3 0 230 229 30

Zm00001d005692_MA1824.1_JASPAR_shift5 (Zm00001d005692:MA1824.1:JASPAR) 0.951 0.792 8.944 0.952 0.977 2 15 53 1 2 14.600 8
; 1_m6_assembly_6 versus Zm00001d005692_MA1824.1_JASPAR (Zm00001d005692:MA1824.1:JASPAR); m=8/128; ncol2=12; w=-1; offset=-1; strand=D; shift=5; score= 14.6; -----wmcAATAATtr ; cor=0.951; Ncor=0.792; logoDP=8.944; NsEucl=0.952; NSW=0.977; rcor=2; rNcor=15; rlogoDP=53; rNsEucl=1; rNSW=2; rank_mean=14.600; match_rank=8 a 0 0 0 0 0 1156 1009 440 3130 3145 31 2697 3173 72 706 912 c 0 0 0 0 0 633 821 1879 34 30 47 148 18 19 240 699 g 0 0 0 0 0 652 681 254 27 24 32 148 28 26 520 925 t 0 0 0 0 0 815 745 683 65 57 3146 263 37 3139 1790 720

ATHB13.ampDAP_M0439_AthalianaCistrome_shift6 (ATHB13.ampDAP:M0439:AthalianaCistrome) 0.895 0.814 10.936 0.927 0.947 24 11 8 14 22 15.800 9
; 1_m6_assembly_6 versus ATHB13.ampDAP_M0439_AthalianaCistrome (ATHB13.ampDAP:M0439:AthalianaCistrome); m=9/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 15.8; ------tyAATAATTr ; cor=0.895; Ncor=0.814; logoDP=10.936; NsEucl=0.927; NSW=0.947; rcor=24; rNcor=11; rlogoDP=8; rNsEucl=14; rNSW=22; rank_mean=15.800; match_rank=9 a 0 0 0 0 0 0 123 68 571 571 0 514 571 0 18 143 c 0 0 0 0 0 0 142 312 0 0 0 7 0 0 0 56 g 0 0 0 0 0 0 82 6 0 0 0 50 0 0 43 322 t 0 0 0 0 0 0 224 185 0 0 571 0 0 571 510 50

Zm00001d005692_MA1824.2_JASPAR_shift7 (Zm00001d005692:MA1824.2:JASPAR) 0.960 0.768 8.944 0.947 0.977 1 23 54 2 1 16.200 10
; 1_m6_assembly_6 versus Zm00001d005692_MA1824.2_JASPAR (Zm00001d005692:MA1824.2:JASPAR); m=10/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 16.2; -------cAATAATt- ; cor=0.960; Ncor=0.768; logoDP=8.944; NsEucl=0.947; NSW=0.977; rcor=1; rNcor=23; rlogoDP=54; rNsEucl=2; rNSW=1; rank_mean=16.200; match_rank=10 a 0 0 0 0 0 0 0 440 3130 3145 31 2697 3173 72 706 0 c 0 0 0 0 0 0 0 1879 34 30 47 148 18 19 240 0 g 0 0 0 0 0 0 0 254 27 24 32 148 28 26 520 0 t 0 0 0 0 0 0 0 683 65 57 3146 263 37 3139 1790 0

Solyc05g007180.3.1_HOMEOBOX_1_AT1G69780_EEAD0650_EEADannot_rc_shift6 (Solyc05g007180.3.1_HOMEOBOX_1_AT1G69780:EEAD0650:EEADannot_rc) 0.934 0.849 8.595 0.943 0.968 7 2 67 3 4 16.600 11
; 1_m6_assembly_6 versus Solyc05g007180.3.1_HOMEOBOX_1_AT1G69780_EEAD0650_EEADannot_rc (Solyc05g007180.3.1_HOMEOBOX_1_AT1G69780:EEAD0650:EEADannot_rc); m=11/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 16.6; ------wyAATAATTr ; cor=0.934; Ncor=0.849; logoDP=8.595; NsEucl=0.943; NSW=0.968; rcor=7; rNcor=2; rlogoDP=67; rNsEucl=3; rNSW=4; rank_mean=16.600; match_rank=11 a 0 0 0 0 0 0 26 22 100 100 0 90 100 0 13 32 c 0 0 0 0 0 0 13 38 0 0 0 10 0 0 0 4 g 0 0 0 0 0 0 7 1 0 0 0 0 0 0 7 43 t 0 0 0 0 0 0 54 39 0 0 100 0 0 100 80 21

ATHB-20_MA1209.2_JASPAR_shift7 (ATHB-20:MA1209.2:JASPAR) 0.921 0.737 11.177 0.921 0.950 11 39 5 23 17 19.000 12
; 1_m6_assembly_6 versus ATHB-20_MA1209.2_JASPAR (ATHB-20:MA1209.2:JASPAR); m=12/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 19; -------yAATAATT- ; cor=0.921; Ncor=0.737; logoDP=11.177; NsEucl=0.921; NSW=0.950; rcor=11; rNcor=39; rlogoDP=5; rNsEucl=23; rNSW=17; rank_mean=19.000; match_rank=12 a 0 0 0 0 0 0 0 30 230 230 0 218 230 0 0 0 c 0 0 0 0 0 0 0 115 0 0 0 0 0 0 1 0 g 0 0 0 0 0 0 0 2 0 0 0 9 0 0 0 0 t 0 0 0 0 0 0 0 83 0 0 230 3 0 230 229 0

ATHB5.DAP_M0410_AthalianaCistrome_shift6 (ATHB5.DAP:M0410:AthalianaCistrome) 0.883 0.803 10.174 0.926 0.945 39 12 13 17 24 21.000 13
; 1_m6_assembly_6 versus ATHB5.DAP_M0410_AthalianaCistrome (ATHB5.DAP:M0410:AthalianaCistrome); m=13/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 21; ------yyAATmATTr ; cor=0.883; Ncor=0.803; logoDP=10.174; NsEucl=0.926; NSW=0.945; rcor=39; rNcor=12; rlogoDP=13; rNsEucl=17; rNSW=24; rank_mean=21.000; match_rank=13 a 0 0 0 0 0 0 145 37 599 599 0 367 599 0 44 177 c 0 0 0 0 0 0 158 368 0 0 0 218 0 0 6 92 g 0 0 0 0 0 0 88 0 0 0 0 3 0 0 53 221 t 0 0 0 0 0 0 208 194 0 0 599 11 0 599 496 109

ATHB53_MA1215.1_JASPAR_shift6 (ATHB53:MA1215.1:JASPAR) 0.879 0.799 11.121 0.921 0.937 42 14 6 22 37 24.200 14
; 1_m6_assembly_6 versus ATHB53_MA1215.1_JASPAR (ATHB53:MA1215.1:JASPAR); m=14/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 24.2; ------mcAATAATTg ; cor=0.879; Ncor=0.799; logoDP=11.121; NsEucl=0.921; NSW=0.937; rcor=42; rNcor=14; rlogoDP=6; rNsEucl=22; rNSW=37; rank_mean=24.200; match_rank=14 a 0 0 0 0 0 0 163 108 599 599 0 563 599 0 34 130 c 0 0 0 0 0 0 246 405 0 0 0 0 0 0 0 29 g 0 0 0 0 0 0 66 0 0 0 0 14 0 0 34 380 t 0 0 0 0 0 0 124 86 0 0 599 22 0 599 531 60

ATHB-53_MA1215.2_JASPAR_shift7 (ATHB-53:MA1215.2:JASPAR) 0.888 0.799 11.118 0.916 0.936 32 13 7 33 40 25.000 15
; 1_m6_assembly_6 versus ATHB-53_MA1215.2_JASPAR (ATHB-53:MA1215.2:JASPAR); m=15/128; ncol2=9; w=0; offset=1; strand=D; shift=7; score= 25; -------cAATAATTg ; cor=0.888; Ncor=0.799; logoDP=11.118; NsEucl=0.916; NSW=0.936; rcor=32; rNcor=13; rlogoDP=7; rNsEucl=33; rNSW=40; rank_mean=25.000; match_rank=15 a 0 0 0 0 0 0 0 108 599 599 0 563 599 0 34 130 c 0 0 0 0 0 0 0 405 0 0 0 0 0 0 0 29 g 0 0 0 0 0 0 0 0 0 0 0 14 0 0 34 380 t 0 0 0 0 0 0 0 86 0 0 599 22 0 599 531 60

ATHB-16_MA0951.1_JASPAR_shift7 (ATHB-16:MA0951.1:JASPAR) 0.895 0.716 9.971 0.913 0.939 25 50 20 40 34 33.800 17
; 1_m6_assembly_6 versus ATHB-16_MA0951.1_JASPAR (ATHB-16:MA0951.1:JASPAR); m=16/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 33.8; -------TAATmATT- ; cor=0.895; Ncor=0.716; logoDP=9.971; NsEucl=0.913; NSW=0.939; rcor=25; rNcor=50; rlogoDP=20; rNsEucl=40; rNSW=34; rank_mean=33.800; match_rank=17 a 0 0 0 0 0 0 0 72 999 999 0 545 999 0 67 0 c 0 0 0 0 0 0 0 214 0 0 0 318 0 0 1 0 g 0 0 0 0 0 0 0 1 0 0 0 137 0 0 67 0 t 0 0 0 0 0 0 0 713 0 0 999 0 0 999 865 0

ATHB16_M0854_1.02_CISBP_shift7 (ATHB16:M0854_1.02:CISBP) 0.895 0.716 9.965 0.913 0.939 26 51 21 39 33 34.000 18
; 1_m6_assembly_6 versus ATHB16_M0854_1.02_CISBP (ATHB16:M0854_1.02:CISBP); m=17/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 34; -------TAATmATT- ; cor=0.895; Ncor=0.716; logoDP=9.965; NsEucl=0.913; NSW=0.939; rcor=26; rNcor=51; rlogoDP=21; rNsEucl=39; rNSW=33; rank_mean=34.000; match_rank=18 a 0 0 0 0 0 0 0 7 100 100 0 54 100 0 7 0 c 0 0 0 0 0 0 0 22 0 0 0 32 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 14 0 0 7 0 t 0 0 0 0 0 0 0 71 0 0 100 0 0 100 86 0

ATHB20.ampDAP_M0431_AthalianaCistrome_rc_shift6 (ATHB20.ampDAP:M0431:AthalianaCistrome_rc) 0.866 0.787 9.109 0.919 0.934 50 18 41 28 42 35.800 19
; 1_m6_assembly_6 versus ATHB20.ampDAP_M0431_AthalianaCistrome_rc (ATHB20.ampDAP:M0431:AthalianaCistrome_rc); m=18/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 35.8; ------yyAATMATTr ; cor=0.866; Ncor=0.787; logoDP=9.109; NsEucl=0.919; NSW=0.934; rcor=50; rNcor=18; rlogoDP=41; rNsEucl=28; rNSW=42; rank_mean=35.800; match_rank=19 a 0 0 0 0 0 0 97 39 592 596 0 420 596 0 27 174 c 0 0 0 0 0 0 161 349 0 0 0 176 0 0 0 43 g 0 0 0 0 0 0 59 0 1 0 0 0 0 0 20 318 t 0 0 0 0 0 0 279 208 3 0 596 0 0 596 549 61

ATHB6.ampDAP_M0440_AthalianaCistrome_shift6 (ATHB6.ampDAP:M0440:AthalianaCistrome) 0.856 0.778 10.499 0.915 0.928 60 20 12 34 54 36.000 20
; 1_m6_assembly_6 versus ATHB6.ampDAP_M0440_AthalianaCistrome (ATHB6.ampDAP:M0440:AthalianaCistrome); m=19/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 36; ------tCAATAATTg ; cor=0.856; Ncor=0.778; logoDP=10.499; NsEucl=0.915; NSW=0.928; rcor=60; rNcor=20; rlogoDP=12; rNsEucl=34; rNSW=54; rank_mean=36.000; match_rank=20 a 0 0 0 0 0 0 127 21 577 577 0 434 577 0 31 139 c 0 0 0 0 0 0 139 436 0 0 0 140 0 0 0 59 g 0 0 0 0 0 0 109 0 0 0 0 0 0 0 31 345 t 0 0 0 0 0 0 202 120 0 0 577 3 0 577 515 34

XP_013609718.1_HOMEOBOX_1_AT2G18550_EEAD0673_EEADannot_shift6 (XP_013609718.1_HOMEOBOX_1_AT2G18550:EEAD0673:EEADannot) 0.854 0.777 11.230 0.911 0.922 62 22 2 45 61 38.400 21
; 1_m6_assembly_6 versus XP_013609718.1_HOMEOBOX_1_AT2G18550_EEAD0673_EEADannot (XP_013609718.1_HOMEOBOX_1_AT2G18550:EEAD0673:EEADannot); m=20/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 38.4; ------hCAATAATTG ; cor=0.854; Ncor=0.777; logoDP=11.230; NsEucl=0.911; NSW=0.922; rcor=62; rNcor=22; rlogoDP=2; rNsEucl=45; rNSW=61; rank_mean=38.400; match_rank=21 a 0 0 0 0 0 0 27 10 100 100 2 99 100 1 8 9 c 0 0 0 0 0 0 38 79 0 0 0 1 0 0 0 2 g 0 0 0 0 0 0 6 0 0 0 0 0 0 0 2 73 t 0 0 0 0 0 0 29 11 0 0 98 0 0 99 90 16

HAT5.ampDAP_M0441_AthalianaCistrome_shift5 (HAT5.ampDAP:M0441:AthalianaCistrome) 0.887 0.634 11.188 0.924 0.942 33 115 3 20 27 39.600 22
; 1_m6_assembly_6 versus HAT5.ampDAP_M0441_AthalianaCistrome (HAT5.ampDAP:M0441:AthalianaCistrome); m=21/128; ncol2=14; w=-1; offset=-1; strand=D; shift=5; score= 39.6; -----wwcAATAATTg ; cor=0.887; Ncor=0.634; logoDP=11.188; NsEucl=0.924; NSW=0.942; rcor=33; rNcor=115; rlogoDP=3; rNsEucl=20; rNSW=27; rank_mean=39.600; match_rank=22 a 0 0 0 0 0 258 161 62 571 571 0 543 571 0 14 132 c 0 0 0 0 0 72 140 374 0 0 0 10 0 0 0 69 g 0 0 0 0 0 62 91 0 0 0 0 18 0 0 42 333 t 0 0 0 0 0 179 179 135 0 0 571 0 0 571 515 37

HB54_Mo17_1_EEAD0406_EEADannot_shift7 (HB54_Mo17_1:EEAD0406:EEADannot) 0.887 0.710 9.096 0.912 0.938 34 54 42 44 36 42.000 23
; 1_m6_assembly_6 versus HB54_Mo17_1_EEAD0406_EEADannot (HB54_Mo17_1:EEAD0406:EEADannot); m=22/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 42; -------CAATrATk- ; cor=0.887; Ncor=0.710; logoDP=9.096; NsEucl=0.912; NSW=0.938; rcor=34; rNcor=54; rlogoDP=42; rNsEucl=44; rNSW=36; rank_mean=42.000; match_rank=23 a 0 0 0 0 0 0 0 6 93 98 0 50 100 1 6 0 c 0 0 0 0 0 0 0 68 0 0 0 16 0 0 0 0 g 0 0 0 0 0 0 0 3 7 2 0 31 0 0 46 0 t 0 0 0 0 0 0 0 23 0 0 100 3 0 99 48 0

ATHB1_ATHB1_Athamap_rc_shift7 (ATHB1:ATHB1:Athamap_rc) 0.863 0.777 9.075 0.908 0.924 51 21 44 58 58 46.400 24
; 1_m6_assembly_6 versus ATHB1_ATHB1_Athamap_rc (ATHB1:ATHB1:Athamap_rc); m=23/128; ncol2=9; w=0; offset=1; strand=R; shift=7; score= 46.4; -------CAATAATTg ; cor=0.863; Ncor=0.777; logoDP=9.075; NsEucl=0.908; NSW=0.924; rcor=51; rNcor=21; rlogoDP=44; rNsEucl=58; rNSW=58; rank_mean=46.400; match_rank=24 a 0 0 0 0 0 0 0 0 25 25 0 20 25 0 1 3 c 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 4 g 0 0 0 0 0 0 0 1 0 0 0 5 0 0 1 13 t 0 0 0 0 0 0 0 3 0 0 25 0 0 25 22 3

HB21_EEAD0060_EEADannot_rc_shift7 (HB21:EEAD0060:EEADannot_rc) 0.852 0.766 10.039 0.903 0.916 64 25 19 77 77 52.400 25
; 1_m6_assembly_6 versus HB21_EEAD0060_EEADannot_rc (HB21:EEAD0060:EEADannot_rc); m=24/128; ncol2=9; w=0; offset=1; strand=R; shift=7; score= 52.4; -------yAATwATTr ; cor=0.852; Ncor=0.766; logoDP=10.039; NsEucl=0.903; NSW=0.916; rcor=64; rNcor=25; rlogoDP=19; rNsEucl=77; rNSW=77; rank_mean=52.400; match_rank=25 a 0 0 0 0 0 0 0 0 3 3 0 2 3 0 0 2 c 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 t 0 0 0 0 0 0 0 1 0 0 3 1 0 3 3 0

YAB1_UN0415.1_JASPAR_shift8 (YAB1:UN0415.1:JASPAR) 0.893 0.714 7.283 0.914 0.941 28 52 117 36 29 52.400 26
; 1_m6_assembly_6 versus YAB1_UN0415.1_JASPAR (YAB1:UN0415.1:JASPAR); m=25/128; ncol2=8; w=0; offset=2; strand=D; shift=8; score= 52.4; --------AATaATwA ; cor=0.893; Ncor=0.714; logoDP=7.283; NsEucl=0.914; NSW=0.941; rcor=28; rNcor=52; rlogoDP=117; rNsEucl=36; rNSW=29; rank_mean=52.400; match_rank=26 a 0 0 0 0 0 0 0 0 796 997 1.11 665 775 112 554 996 c 0 0 0 0 0 0 0 0 1.98 1.11 1.11 112 1.11 1.11 112 1.24 g 0 0 0 0 0 0 0 0 1.98 1.11 1.11 112 1.11 1.11 1.11 1.24 t 0 0 0 0 0 0 0 0 200 1.11 997 112 222 886 333 1.24

LMI1.DAP_M0413_AthalianaCistrome_rc_shift5 (LMI1.DAP:M0413:AthalianaCistrome_rc) 0.871 0.670 8.526 0.918 0.933 47 78 68 29 43 53.000 27
; 1_m6_assembly_6 versus LMI1.DAP_M0413_AthalianaCistrome_rc (LMI1.DAP:M0413:AthalianaCistrome_rc); m=26/128; ncol2=13; w=-1; offset=-1; strand=R; shift=5; score= 53; -----ahCAATAATTg ; cor=0.871; Ncor=0.670; logoDP=8.526; NsEucl=0.918; NSW=0.933; rcor=47; rNcor=78; rlogoDP=68; rNsEucl=29; rNSW=43; rank_mean=53.000; match_rank=27 a 0 0 0 0 0 327 166 66 600 598 0 582 599 2 35 73 c 0 0 0 0 0 37 180 461 0 1 2 0 0 0 5 72 g 0 0 0 0 0 97 98 1 0 0 0 2 0 1 70 404 t 0 0 0 0 0 139 156 72 0 1 598 16 1 597 490 51

HB22_Mo17_1_EEAD0404_EEADannot_shift3 (HB22_Mo17_1:EEAD0404:EEADannot) 0.889 0.592 9.580 0.928 0.948 31 174 31 13 20 53.800 28
; 1_m6_assembly_6 versus HB22_Mo17_1_EEAD0404_EEADannot (HB22_Mo17_1:EEAD0404:EEADannot); m=27/128; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score= 53.8; ---wammCAATaATTv ; cor=0.889; Ncor=0.592; logoDP=9.580; NsEucl=0.928; NSW=0.948; rcor=31; rNcor=174; rlogoDP=31; rNsEucl=13; rNSW=20; rank_mean=53.800; match_rank=28 a 0 0 0 34 52 42 28 6 98 99 0 64 100 0 7 32 c 0 0 0 11 14 30 31 70 0 0 1 8 0 0 0 26 g 0 0 0 12 20 11 19 0 1 1 0 18 0 0 22 34 t 0 0 0 43 14 17 22 24 1 0 99 10 0 100 71 8

ATHB51_ATHB51_ArabidopsisPBM_rc_shift6 (ATHB51:ATHB51:ArabidopsisPBM_rc) 0.859 0.859 5.747 0.919 0.935 56 1 166 26 41 58.000 29
; 1_m6_assembly_6 versus ATHB51_ATHB51_ArabidopsisPBM_rc (ATHB51:ATHB51:ArabidopsisPBM_rc); m=28/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 58; ------kCAATwATKr ; cor=0.859; Ncor=0.859; logoDP=5.747; NsEucl=0.919; NSW=0.935; rcor=56; rNcor=1; rlogoDP=166; rNsEucl=26; rNSW=41; rank_mean=58.000; match_rank=29 a 0 0 0 0 0 0 21 10 96 98 0 58 99 2 6 32 c 0 0 0 0 0 0 21 78 1 1 1 0 0 0 0 16 g 0 0 0 0 0 0 26 2 3 0 0 1 1 0 25 38 t 0 0 0 0 0 0 32 10 0 1 99 41 0 98 69 14

ATHB-6_MA0953.1_JASPAR_shift6 (ATHB-6:MA0953.1:JASPAR) 0.879 0.791 5.234 0.917 0.937 41 16 178 31 38 60.800 30
; 1_m6_assembly_6 versus ATHB-6_MA0953.1_JASPAR (ATHB-6:MA0953.1:JASPAR); m=29/128; ncol2=9; w=0; offset=0; strand=D; shift=6; score= 60.8; ------bcAATmATk- ; cor=0.879; Ncor=0.791; logoDP=5.234; NsEucl=0.917; NSW=0.937; rcor=41; rNcor=16; rlogoDP=178; rNsEucl=31; rNSW=38; rank_mean=60.800; match_rank=30 a 0 0 0 0 0 0 177 149 745 886 20 356 924 106 234 0 c 0 0 0 0 0 0 252 524 89 71 6 310 5 66 111 0 g 0 0 0 0 0 0 287 85 73 1 1 128 38 130 266 0 t 0 0 0 0 0 0 284 243 92 42 972 206 32 698 389 0

ATHB6_M0843_1.02_CISBP_shift6 (ATHB6:M0843_1.02:CISBP) 0.878 0.790 5.192 0.916 0.937 44 17 181 32 39 62.600 31
; 1_m6_assembly_6 versus ATHB6_M0843_1.02_CISBP (ATHB6:M0843_1.02:CISBP); m=30/128; ncol2=9; w=0; offset=0; strand=D; shift=6; score= 62.6; ------byAATmATk- ; cor=0.878; Ncor=0.790; logoDP=5.192; NsEucl=0.916; NSW=0.937; rcor=44; rNcor=17; rlogoDP=181; rNsEucl=32; rNSW=39; rank_mean=62.600; match_rank=31 a 0 0 0 0 0 0 18 15 75 89 2 35 92 11 23 0 c 0 0 0 0 0 0 25 52 9 7 1 31 1 7 11 0 g 0 0 0 0 0 0 29 8 7 0 0 13 4 13 27 0 t 0 0 0 0 0 0 28 25 9 4 97 21 3 69 39 0

ATHB40.ampDAP_M0409_AthalianaCistrome_shift3 (ATHB40.ampDAP:M0409:AthalianaCistrome) 0.846 0.604 9.843 0.914 0.927 69 155 26 35 55 68.000 32
; 1_m6_assembly_6 versus ATHB40.ampDAP_M0409_AthalianaCistrome (ATHB40.ampDAP:M0409:AthalianaCistrome); m=31/128; ncol2=14; w=-3; offset=-3; strand=D; shift=3; score= 68; ---rmayCAATwATTd ; cor=0.846; Ncor=0.604; logoDP=9.843; NsEucl=0.914; NSW=0.927; rcor=69; rNcor=155; rlogoDP=26; rNsEucl=35; rNSW=55; rank_mean=68.000; match_rank=32 a 0 0 0 226 189 351 137 14 599 599 0 291 599 0 90 176 c 0 0 0 78 203 56 197 520 0 0 0 47 0 0 9 35 g 0 0 0 150 108 59 71 1 0 0 0 40 0 0 58 209 t 0 0 0 145 99 133 194 64 0 0 599 221 0 599 442 179

ZHD3_MA1213.3_JASPAR_rc_shift7 (ZHD3:MA1213.3:JASPAR_rc) 0.841 0.757 9.005 0.901 0.911 72 28 52 97 93 68.400 33
; 1_m6_assembly_6 versus ZHD3_MA1213.3_JASPAR_rc (ZHD3:MA1213.3:JASPAR_rc); m=32/128; ncol2=9; w=0; offset=1; strand=R; shift=7; score= 68.4; -------CAATAATTG ; cor=0.841; Ncor=0.757; logoDP=9.005; NsEucl=0.901; NSW=0.911; rcor=72; rNcor=28; rlogoDP=52; rNsEucl=97; rNSW=93; rank_mean=68.400; match_rank=33 a 0 0 0 0 0 0 0 928 7271 7418 34 5843 7439 54 213 944 c 0 0 0 0 0 0 0 5524 67 29 14 247 8 5 26 189 g 0 0 0 0 0 0 0 148 30 11 7 247 19 23 133 5659 t 0 0 0 0 0 0 0 897 129 39 7442 1160 31 7415 7125 705

ZHD3_MA1213.2_JASPAR_rc_shift5 (ZHD3:MA1213.2:JASPAR_rc) 0.839 0.646 9.007 0.910 0.918 74 99 51 51 70 69.000 34
; 1_m6_assembly_6 versus ZHD3_MA1213.2_JASPAR_rc (ZHD3:MA1213.2:JASPAR_rc); m=33/128; ncol2=13; w=-1; offset=-1; strand=R; shift=5; score= 69; -----whCAATAATTG ; cor=0.839; Ncor=0.646; logoDP=9.007; NsEucl=0.910; NSW=0.918; rcor=74; rNcor=99; rlogoDP=51; rNsEucl=51; rNSW=70; rank_mean=69.000; match_rank=34 a 0 0 0 0 0 3101 2368 928 7271 7418 34 5843 7439 54 213 944 c 0 0 0 0 0 943 1964 5524 67 29 14 247 8 5 26 189 g 0 0 0 0 0 1209 824 148 30 11 7 247 19 23 133 5659 t 0 0 0 0 0 2244 2341 897 129 39 7442 1160 31 7415 7125 705

ATHB18_MA1211.1_JASPAR_rc_shift6 (ATHB18:MA1211.1:JASPAR_rc) 0.813 0.739 9.552 0.905 0.910 113 37 32 72 97 70.200 35
; 1_m6_assembly_6 versus ATHB18_MA1211.1_JASPAR_rc (ATHB18:MA1211.1:JASPAR_rc); m=34/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 70.2; ------myAATrATTr ; cor=0.813; Ncor=0.739; logoDP=9.552; NsEucl=0.905; NSW=0.910; rcor=113; rNcor=37; rlogoDP=32; rNsEucl=72; rNSW=97; rank_mean=70.200; match_rank=35 a 0 0 0 0 0 0 192 127 547 595 0 237 595 0 0 222 c 0 0 0 0 0 0 216 234 13 0 0 5 0 0 0 0 g 0 0 0 0 0 0 73 15 8 0 0 308 0 0 11 373 t 0 0 0 0 0 0 114 219 27 0 595 45 0 595 584 0

ATHB-40_MA1214.2_JASPAR_shift5 (ATHB-40:MA1214.2:JASPAR) 0.814 0.740 10.124 0.903 0.906 109 35 14 81 113 70.400 36
; 1_m6_assembly_6 versus ATHB-40_MA1214.2_JASPAR (ATHB-40:MA1214.2:JASPAR); m=35/128; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score= 70.4; -----acCAATwATTg ; cor=0.814; Ncor=0.740; logoDP=10.124; NsEucl=0.903; NSW=0.906; rcor=109; rNcor=35; rlogoDP=14; rNsEucl=81; rNSW=113; rank_mean=70.400; match_rank=36 a 0 0 0 0 0 404 111 21 600 600 0 388 600 0 56 92 c 0 0 0 0 0 25 325 530 0 0 0 18 0 0 5 9 g 0 0 0 0 0 68 68 0 0 0 0 25 0 0 41 397 t 0 0 0 0 0 103 96 49 0 0 600 169 0 600 498 102

ATHB5.ampDAP_M0412_AthalianaCistrome_rc_shift6 (ATHB5.ampDAP:M0412:AthalianaCistrome_rc) 0.832 0.832 5.953 0.911 0.920 85 7 154 46 64 71.200 37
; 1_m6_assembly_6 versus ATHB5.ampDAP_M0412_AthalianaCistrome_rc (ATHB5.ampDAP:M0412:AthalianaCistrome_rc); m=36/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 71.2; ------yyAATmATTg ; cor=0.832; Ncor=0.832; logoDP=5.953; NsEucl=0.911; NSW=0.920; rcor=85; rNcor=7; rlogoDP=154; rNsEucl=46; rNSW=64; rank_mean=71.200; match_rank=37 a 0 0 0 0 0 0 122 0 598 600 0 253 600 5 34 130 c 0 0 0 0 0 0 159 405 2 0 0 312 0 0 3 78 g 0 0 0 0 0 0 110 5 0 0 1 8 0 0 69 259 t 0 0 0 0 0 0 209 190 0 0 599 27 0 595 494 133

ATHB-51_MA0952.1_JASPAR_rc_shift7 (ATHB-51:MA0952.1:JASPAR_rc) 0.877 0.702 5.752 0.907 0.930 45 59 164 62 46 75.200 38
; 1_m6_assembly_6 versus ATHB-51_MA0952.1_JASPAR_rc (ATHB-51:MA0952.1:JASPAR_rc); m=37/128; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 75.2; -------CAATwATK- ; cor=0.877; Ncor=0.702; logoDP=5.752; NsEucl=0.907; NSW=0.930; rcor=45; rNcor=59; rlogoDP=164; rNsEucl=62; rNSW=46; rank_mean=75.200; match_rank=38 a 0 0 0 0 0 0 0 100 965 984 3 580 988 7 51 0 c 0 0 0 0 0 0 0 777 12 4 5 3 1 4 4 0 g 0 0 0 0 0 0 0 18 18 2 2 6 8 5 253 0 t 0 0 0 0 0 0 0 105 5 10 990 411 2 985 691 0

Solyc02g085630.3.1_HOMEOBOX_1_AT2G18550_EEAD0645_EEADannot_rc_shift5 (Solyc02g085630.3.1_HOMEOBOX_1_AT2G18550:EEAD0645:EEADannot_rc) 0.901 0.819 0.520 0.931 0.952 19 9 347 11 15 80.200 41
; 1_m6_assembly_6 versus Solyc02g085630.3.1_HOMEOBOX_1_AT2G18550_EEAD0645_EEADannot_rc (Solyc02g085630.3.1_HOMEOBOX_1_AT2G18550:EEAD0645:EEADannot_rc); m=38/128; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score= 80.2; -----whmAATAATTr ; cor=0.901; Ncor=0.819; logoDP=0.520; NsEucl=0.931; NSW=0.952; rcor=19; rNcor=9; rlogoDP=347; rNsEucl=11; rNSW=15; rank_mean=80.200; match_rank=41 a 0 0 0 0 0 63 27 27 100 100 0 78 100 0 17 28 c 0 0 0 0 0 5 38 61 0 0 0 1 0 0 1 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 54 t 0 0 0 0 0 32 35 12 0 0 100 21 0 100 75 12

Medtr8g106590.1_M0145_1.02_CISBP_shift6 (Medtr8g106590.1:M0145_1.02:CISBP) 0.867 0.694 5.617 0.906 0.929 49 64 169 69 51 80.400 42
; 1_m6_assembly_6 versus Medtr8g106590.1_M0145_1.02_CISBP (Medtr8g106590.1:M0145_1.02:CISBP); m=39/128; ncol2=8; w=0; offset=0; strand=D; shift=6; score= 80.4; ------AAAWTAAT-- ; cor=0.867; Ncor=0.694; logoDP=5.617; NsEucl=0.906; NSW=0.929; rcor=49; rNcor=64; rlogoDP=169; rNsEucl=69; rNSW=51; rank_mean=80.400; match_rank=42 a 0 0 0 0 0 0 84 88 83 69 17 83 76 18 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 g 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 4 12 17 31 83 17 21 78 0 0

HAT5_MA0008.1_JASPAR_rc_shift8 (HAT5:MA0008.1:JASPAR_rc) 0.923 0.738 1.109 0.926 0.956 10 38 327 16 13 80.800 43
; 1_m6_assembly_6 versus HAT5_MA0008.1_JASPAR_rc (HAT5:MA0008.1:JASPAR_rc); m=40/128; ncol2=8; w=0; offset=2; strand=R; shift=8; score= 80.8; --------AATAATTg ; cor=0.923; Ncor=0.738; logoDP=1.109; NsEucl=0.926; NSW=0.956; rcor=10; rNcor=38; rlogoDP=327; rNsEucl=16; rNSW=13; rank_mean=80.800; match_rank=43 a 0 0 0 0 0 0 0 0 23 24 0 20 25 0 3 5 c 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 4 g 0 0 0 0 0 0 0 0 0 0 0 5 0 0 1 13 t 0 0 0 0 0 0 0 0 0 1 24 0 0 25 21 3

Carub.0002s1646.1_HOMEOBOX_1_AT1G69780_EEAD0603_EEADannot_rc_shift5 (Carub.0002s1646.1_HOMEOBOX_1_AT1G69780:EEAD0603:EEADannot_rc) 0.921 0.837 0.262 0.938 0.961 12 5 378 7 10 82.400 44
; 1_m6_assembly_6 versus Carub.0002s1646.1_HOMEOBOX_1_AT1G69780_EEAD0603_EEADannot_rc (Carub.0002s1646.1_HOMEOBOX_1_AT1G69780:EEAD0603:EEADannot_rc); m=41/128; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score= 82.4; -----wwyAATAATTr ; cor=0.921; Ncor=0.837; logoDP=0.262; NsEucl=0.938; NSW=0.961; rcor=12; rNcor=5; rlogoDP=378; rNsEucl=7; rNSW=10; rank_mean=82.400; match_rank=44 a 0 0 0 0 0 61 29 21 100 100 0 85 100 0 8 29 c 0 0 0 0 0 0 18 43 0 0 0 0 0 0 0 7 g 0 0 0 0 0 2 7 3 0 0 0 8 0 0 8 50 t 0 0 0 0 0 37 46 33 0 0 100 7 0 100 84 14

AL2G28980.t1_HOMEOBOX_1_AT1G69780_EEAD0582_EEADannot_shift4 (AL2G28980.t1_HOMEOBOX_1_AT1G69780:EEAD0582:EEADannot) 0.835 0.627 9.673 0.901 0.912 79 126 29 94 90 83.600 45
; 1_m6_assembly_6 versus AL2G28980.t1_HOMEOBOX_1_AT1G69780_EEAD0582_EEADannot (AL2G28980.t1_HOMEOBOX_1_AT1G69780:EEAD0582:EEADannot); m=42/128; ncol2=11; w=-2; offset=-2; strand=D; shift=4; score= 83.6; ----wwTCAATwATT- ; cor=0.835; Ncor=0.627; logoDP=9.673; NsEucl=0.901; NSW=0.912; rcor=79; rNcor=126; rlogoDP=29; rNsEucl=94; rNSW=90; rank_mean=83.600; match_rank=45 a 0 0 0 0 59 67 12 9 99 99 0 46 100 0 8 0 c 0 0 0 0 12 5 10 68 0 1 0 7 0 0 0 0 g 0 0 0 0 1 2 2 0 0 0 0 6 0 0 6 0 t 0 0 0 0 28 26 76 23 1 0 100 41 0 100 86 0

ATHB-X_MA1211.2_JASPAR_rc_shift7 (ATHB-X:MA1211.2:JASPAR_rc) 0.818 0.736 9.551 0.897 0.904 104 40 33 120 123 84.000 46
; 1_m6_assembly_6 versus ATHB-X_MA1211.2_JASPAR_rc (ATHB-X:MA1211.2:JASPAR_rc); m=43/128; ncol2=9; w=0; offset=1; strand=R; shift=7; score= 84; -------yAATrATTr ; cor=0.818; Ncor=0.736; logoDP=9.551; NsEucl=0.897; NSW=0.904; rcor=104; rNcor=40; rlogoDP=33; rNsEucl=120; rNSW=123; rank_mean=84.000; match_rank=46 a 0 0 0 0 0 0 0 127 547 595 0 237 595 0 0 222 c 0 0 0 0 0 0 0 234 13 0 0 5 0 0 0 0 g 0 0 0 0 0 0 0 15 8 0 0 308 0 0 11 373 t 0 0 0 0 0 0 0 219 27 0 595 45 0 595 584 0

HB102_Mo17_1_EEAD0394_EEADannot_rc_shift2 (HB102_Mo17_1:EEAD0394:EEADannot_rc) 0.902 0.602 4.276 0.932 0.954 17 158 223 10 14 84.400 47
; 1_m6_assembly_6 versus HB102_Mo17_1_EEAD0394_EEADannot_rc (HB102_Mo17_1:EEAD0394:EEADannot_rc); m=44/128; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score= 84.4; --wwaahyAATAATTr ; cor=0.902; Ncor=0.602; logoDP=4.276; NsEucl=0.932; NSW=0.954; rcor=17; rNcor=158; rlogoDP=223; rNsEucl=10; rNSW=14; rank_mean=84.400; match_rank=47 a 0 0 39 31 47 52 29 8 100 100 0 73 100 0 6 32 c 0 0 20 10 18 24 29 66 0 0 0 7 0 0 0 24 g 0 0 11 9 21 8 14 0 0 0 0 14 0 0 18 35 t 0 0 30 50 14 16 28 26 0 0 100 6 0 100 76 9

XP_013589953.1_HOMEOBOX_1_AT1G69780_EEAD0666_EEADannot_rc_shift4 (XP_013589953.1_HOMEOBOX_1_AT1G69780:EEAD0666:EEADannot_rc) 0.862 0.647 4.995 0.911 0.928 53 98 188 47 53 87.800 49
; 1_m6_assembly_6 versus XP_013589953.1_HOMEOBOX_1_AT1G69780_EEAD0666_EEADannot_rc (XP_013589953.1_HOMEOBOX_1_AT1G69780:EEAD0666:EEADannot_rc); m=45/128; ncol2=11; w=-2; offset=-2; strand=R; shift=4; score= 87.8; ----awTyAATwATT- ; cor=0.862; Ncor=0.647; logoDP=4.995; NsEucl=0.911; NSW=0.928; rcor=53; rNcor=98; rlogoDP=188; rNsEucl=47; rNSW=53; rank_mean=87.800; match_rank=49 a 0 0 0 0 58 63 14 9 99 99 0 49 100 1 9 0 c 0 0 0 0 13 7 14 55 0 1 0 6 0 0 0 0 g 0 0 0 0 5 2 1 0 0 0 0 7 0 0 9 0 t 0 0 0 0 24 28 71 36 1 0 100 38 0 99 82 0

ATHB-6_MA0953.2_JASPAR_shift7 (ATHB-6:MA0953.2:JASPAR) 0.895 0.627 5.231 0.899 0.929 23 125 179 101 47 95.000
; 1_m6_assembly_6 versus ATHB-6_MA0953.2_JASPAR (ATHB-6:MA0953.2:JASPAR); m=46/128; ncol2=7; w=0; offset=1; strand=D; shift=7; score= 95; -------cAATmAT-- ; cor=0.895; Ncor=0.627; logoDP=5.231; NsEucl=0.899; NSW=0.929; rcor=23; rNcor=125; rlogoDP=179; rNsEucl=101; rNSW=47; rank_mean=95.000; match_rank= a 0 0 0 0 0 0 0 149 745 886 20 356 924 106 0 0 c 0 0 0 0 0 0 0 524 89 71 6 310 5 66 0 0 g 0 0 0 0 0 0 0 85 73 1 1 128 38 130 0 0 t 0 0 0 0 0 0 0 243 92 42 972 206 32 698 0 0

HAT22_MA1210.3_JASPAR_shift7 (HAT22:MA1210.3:JASPAR) 0.816 0.734 8.713 0.894 0.899 107 41 60 135 138 96.200
; 1_m6_assembly_6 versus HAT22_MA1210.3_JASPAR (HAT22:MA1210.3:JASPAR); m=47/128; ncol2=9; w=0; offset=1; strand=D; shift=7; score= 96.2; -------CAATAATTG ; cor=0.816; Ncor=0.734; logoDP=8.713; NsEucl=0.894; NSW=0.899; rcor=107; rNcor=41; rlogoDP=60; rNsEucl=135; rNSW=138; rank_mean=96.200; match_rank= a 0 0 0 0 0 0 0 362 3066 3127 55 2276 3128 52 83 259 c 0 0 0 0 0 0 0 2470 41 25 23 309 14 9 20 92 g 0 0 0 0 0 0 0 86 21 6 15 309 26 18 78 2650 t 0 0 0 0 0 0 0 298 88 58 3123 322 48 3137 3035 215

ATHB22_M0844_1.02_CISBP_shift7 (ATHB22:M0844_1.02:CISBP) 0.884 0.568 5.248 0.919 0.941 38 209 177 27 30 96.200
; 1_m6_assembly_6 versus ATHB22_M0844_1.02_CISBP (ATHB22:M0844_1.02:CISBP); m=48/128; ncol2=13; w=0; offset=1; strand=D; shift=7; score= 96.2; -------twATAATwt ; cor=0.884; Ncor=0.568; logoDP=5.248; NsEucl=0.919; NSW=0.941; rcor=38; rNcor=209; rlogoDP=177; rNsEucl=27; rNSW=30; rank_mean=96.200; match_rank= a 0 0 0 0 0 0 0 23 36 70 15 83 90 0 50 22 c 0 0 0 0 0 0 0 23 18 10 6 2 0 0 0 13 g 0 0 0 0 0 0 0 22 18 10 5 2 10 0 0 2 t 0 0 0 0 0 0 0 32 28 10 74 13 0 100 50 63

HAT22_MA1210.2_JASPAR_shift5 (HAT22:MA1210.2:JASPAR) 0.814 0.626 8.714 0.904 0.907 112 128 59 76 108 96.600
; 1_m6_assembly_6 versus HAT22_MA1210.2_JASPAR (HAT22:MA1210.2:JASPAR); m=49/128; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score= 96.6; -----wwCAATAATTG ; cor=0.814; Ncor=0.626; logoDP=8.714; NsEucl=0.904; NSW=0.907; rcor=112; rNcor=128; rlogoDP=59; rNsEucl=76; rNSW=108; rank_mean=96.600; match_rank= a 0 0 0 0 0 1122 950 362 3066 3127 55 2276 3128 52 83 259 c 0 0 0 0 0 540 791 2470 41 25 23 309 14 9 20 92 g 0 0 0 0 0 543 488 86 21 6 15 309 26 18 78 2650 t 0 0 0 0 0 1011 987 298 88 58 3123 322 48 3137 3035 215

ICU4_ICU4_ArabidopsisPBM_shift6 (ICU4:ICU4:ArabidopsisPBM) 0.782 0.782 6.117 0.903 0.905 170 19 148 82 114 106.600
; 1_m6_assembly_6 versus ICU4_ICU4_ArabidopsisPBM (ICU4:ICU4:ArabidopsisPBM); m=50/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 106.6; ------gTAATdATTA ; cor=0.782; Ncor=0.782; logoDP=6.117; NsEucl=0.903; NSW=0.905; rcor=170; rNcor=19; rlogoDP=148; rNsEucl=82; rNSW=114; rank_mean=106.600; match_rank= a 0 0 0 0 0 0 20 9 72 92 5 27 93 3 3 68 c 0 0 0 0 0 0 7 17 19 3 0 7 1 2 6 6 g 0 0 0 0 0 0 64 6 6 2 2 28 1 2 19 17 t 0 0 0 0 0 0 9 68 3 3 93 38 5 93 72 9

HAT5_MA0008.4_JASPAR_shift7 (HAT5:MA0008.4:JASPAR) 0.808 0.728 10.077 0.889 0.889 123 44 17 174 185 108.600
; 1_m6_assembly_6 versus HAT5_MA0008.4_JASPAR (HAT5:MA0008.4:JASPAR); m=51/128; ncol2=9; w=0; offset=1; strand=D; shift=7; score= 108.6; -------CAATWATTG ; cor=0.808; Ncor=0.728; logoDP=10.077; NsEucl=0.889; NSW=0.889; rcor=123; rNcor=44; rlogoDP=17; rNsEucl=174; rNSW=185; rank_mean=108.600; match_rank= a 0 0 0 0 0 0 0 16 190 190 1 134 189 0 6 13 c 0 0 0 0 0 0 0 148 1 0 0 2 0 0 0 5 g 0 0 0 0 0 0 0 1 0 0 0 2 0 0 4 168 t 0 0 0 0 0 0 0 26 0 1 190 53 2 191 181 5

HMGB10_UN0863.1_JASPAR_shift7 (HMGB10:UN0863.1:JASPAR) 0.892 0.535 8.414 0.891 0.929 30 246 69 157 48 110.000
; 1_m6_assembly_6 versus HMGB10_UN0863.1_JASPAR (HMGB10:UN0863.1:JASPAR); m=52/128; ncol2=6; w=0; offset=1; strand=D; shift=7; score= 110; -------TwATAA--- ; cor=0.892; Ncor=0.535; logoDP=8.414; NsEucl=0.891; NSW=0.929; rcor=30; rNcor=246; rlogoDP=69; rNsEucl=157; rNSW=48; rank_mean=110.000; match_rank= a 0 0 0 0 0 0 0 0 662 1000 0 1000 1000 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 1000 338 0 1000 0 0 0 0 0

ATHB-15_MA1026.1_JASPAR_rc_shift8 (ATHB-15:MA1026.1:JASPAR_rc) 0.868 0.694 0.904 0.906 0.929 48 63 330 66 49 111.200
; 1_m6_assembly_6 versus ATHB-15_MA1026.1_JASPAR_rc (ATHB-15:MA1026.1:JASPAR_rc); m=53/128; ncol2=8; w=0; offset=2; strand=R; shift=8; score= 111.2; --------AAThATTa ; cor=0.868; Ncor=0.694; logoDP=0.904; NsEucl=0.906; NSW=0.929; rcor=48; rNcor=63; rlogoDP=330; rNsEucl=66; rNSW=49; rank_mean=111.200; match_rank= a 0 0 0 0 0 0 0 0 722 926 46 381 928 26 28 675 c 0 0 0 0 0 0 0 0 193 32 10 282 16 15 57 60 g 0 0 0 0 0 0 0 0 57 15 16 62 10 32 193 172 t 0 0 0 0 0 0 0 0 28 26 928 274 46 926 722 93

HAHB-4_HAHB4_Athamap_shift7 (HAHB-4:HAHB4:Athamap) 0.798 0.718 9.830 0.890 0.891 144 48 28 164 174 111.600
; 1_m6_assembly_6 versus HAHB-4_HAHB4_Athamap (HAHB-4:HAHB4:Athamap); m=54/128; ncol2=9; w=0; offset=1; strand=D; shift=7; score= 111.6; -------TAATrATTg ; cor=0.798; Ncor=0.718; logoDP=9.830; NsEucl=0.890; NSW=0.891; rcor=144; rNcor=48; rlogoDP=28; rNsEucl=164; rNSW=174; rank_mean=111.600; match_rank= a 0 0 0 0 0 0 0 1 25 25 0 7 25 0 3 6 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 g 0 0 0 0 0 0 0 0 0 0 0 14 0 0 3 14 t 0 0 0 0 0 0 0 24 0 0 25 4 0 25 18 0

YAB1_YAB1_ArabidopsisPBM_shift7 (YAB1:YAB1:ArabidopsisPBM) 0.813 0.665 5.112 0.901 0.912 114 85 183 90 88 112.000
; 1_m6_assembly_6 versus YAB1_YAB1_ArabidopsisPBM (YAB1:YAB1:ArabidopsisPBM); m=55/128; ncol2=10; w=0; offset=1; strand=D; shift=7; score= 112; -------ywATmATAA ; cor=0.813; Ncor=0.665; logoDP=5.112; NsEucl=0.901; NSW=0.912; rcor=114; rNcor=85; rlogoDP=183; rNsEucl=90; rNSW=88; rank_mean=112.000; match_rank= a 0 0 0 0 0 0 0 9 65 86 4 29 91 5 73 77 c 0 0 0 0 0 0 0 47 3 3 2 42 1 3 9 5 g 0 0 0 0 0 0 0 11 4 2 4 13 5 4 11 8 t 0 0 0 0 0 0 0 33 28 9 90 16 3 88 7 10

HAT2.ampDAP_M0432_AthalianaCistrome_shift6 (HAT2.ampDAP:M0432:AthalianaCistrome) 0.772 0.702 9.187 0.897 0.894 198 58 37 117 157 113.400
; 1_m6_assembly_6 versus HAT2.ampDAP_M0432_AthalianaCistrome (HAT2.ampDAP:M0432:AthalianaCistrome); m=56/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 113.4; ------yyAATCATTw ; cor=0.772; Ncor=0.702; logoDP=9.187; NsEucl=0.897; NSW=0.894; rcor=198; rNcor=58; rlogoDP=37; rNsEucl=117; rNSW=157; rank_mean=113.400; match_rank= a 0 0 0 0 0 0 147 20 581 599 0 11 599 8 106 184 c 0 0 0 0 0 0 150 272 19 1 0 450 1 4 15 38 g 0 0 0 0 0 0 107 0 0 0 0 38 0 0 23 141 t 0 0 0 0 0 0 196 308 0 0 600 101 0 588 456 237

ATHB21_MA1213.1_JASPAR_shift3 (ATHB21:MA1213.1:JASPAR) 0.803 0.573 9.924 0.901 0.902 135 202 22 92 132 116.600
; 1_m6_assembly_6 versus ATHB21_MA1213.1_JASPAR (ATHB21:MA1213.1:JASPAR); m=57/128; ncol2=14; w=-3; offset=-3; strand=D; shift=3; score= 116.6; ---rcamCAATwATTg ; cor=0.803; Ncor=0.573; logoDP=9.924; NsEucl=0.901; NSW=0.902; rcor=135; rNcor=202; rlogoDP=22; rNsEucl=92; rNSW=132; rank_mean=116.600; match_rank= a 0 0 0 187 129 376 152 2 597 597 0 286 597 0 75 131 c 0 0 0 95 260 44 283 565 0 0 0 27 0 0 5 16 g 0 0 0 175 124 72 45 0 0 0 0 26 0 0 50 319 t 0 0 0 140 84 105 117 30 0 0 597 258 0 597 467 131

HAT5_MA0008.2_JASPAR_rc_shift6 (HAT5:MA0008.2:JASPAR_rc) 0.835 0.696 1.475 0.908 0.916 81 62 317 57 78 119.000
; 1_m6_assembly_6 versus HAT5_MA0008.2_JASPAR_rc (HAT5:MA0008.2:JASPAR_rc); m=58/128; ncol2=12; w=0; offset=0; strand=R; shift=6; score= 119; ------sCAATAATTg ; cor=0.835; Ncor=0.696; logoDP=1.475; NsEucl=0.908; NSW=0.916; rcor=81; rNcor=62; rlogoDP=317; rNsEucl=57; rNSW=78; rank_mean=119.000; match_rank= a 0 0 0 0 0 0 1 0 25 25 0 20 25 0 1 3 c 0 0 0 0 0 0 4 12 0 0 0 0 0 0 0 4 g 0 0 0 0 0 0 8 1 0 0 0 5 0 0 1 13 t 0 0 0 0 0 0 2 3 0 0 25 0 0 25 22 3

HAT5_MA0008.3_JASPAR_shift4 (HAT5:MA0008.3:JASPAR) 0.804 0.536 10.082 0.898 0.897 134 245 16 110 145 130.000
; 1_m6_assembly_6 versus HAT5_MA0008.3_JASPAR (HAT5:MA0008.3:JASPAR); m=59/128; ncol2=15; w=-2; offset=-2; strand=D; shift=4; score= 130; ----wwwCAATWATTG ; cor=0.804; Ncor=0.536; logoDP=10.082; NsEucl=0.898; NSW=0.897; rcor=134; rNcor=245; rlogoDP=16; rNsEucl=110; rNSW=145; rank_mean=130.000; match_rank= a 0 0 0 0 72 80 50 16 190 190 1 134 189 0 6 13 c 0 0 0 0 32 27 31 148 1 0 0 2 0 0 0 5 g 0 0 0 0 29 18 20 1 0 0 0 2 0 0 4 168 t 0 0 0 0 58 66 90 26 0 1 190 53 2 191 181 5

ATHB-4_MA1406.2_JASPAR_rc_shift7 (ATHB-4:MA1406.2:JASPAR_rc) 0.778 0.700 8.173 0.888 0.887 185 61 75 198 199 143.600
; 1_m6_assembly_6 versus ATHB-4_MA1406.2_JASPAR_rc (ATHB-4:MA1406.2:JASPAR_rc); m=60/128; ncol2=9; w=0; offset=1; strand=R; shift=7; score= 143.6; -------CAATsATTr ; cor=0.778; Ncor=0.700; logoDP=8.173; NsEucl=0.888; NSW=0.887; rcor=185; rNcor=61; rlogoDP=75; rNsEucl=198; rNSW=199; rank_mean=143.600; match_rank= a 0 0 0 0 0 0 0 9947 90866 98352 473 13246 99294 268 13829 55312 c 0 0 0 0 0 0 0 68409 2806 422 333 40460 76 93 618 1915 g 0 0 0 0 0 0 0 3599 764 228 66 42828 333 1291 3298 40381 t 0 0 0 0 0 0 0 18045 5565 998 99128 3466 297 98348 82255 2392

ATHB4_MA1406.1_JASPAR_rc_shift6 (ATHB4:MA1406.1:JASPAR_rc) 0.763 0.763 4.971 0.895 0.890 222 27 189 129 180 149.400
; 1_m6_assembly_6 versus ATHB4_MA1406.1_JASPAR_rc (ATHB4:MA1406.1:JASPAR_rc); m=61/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 149.4; ------sCAATsATTr ; cor=0.763; Ncor=0.763; logoDP=4.971; NsEucl=0.895; NSW=0.890; rcor=222; rNcor=27; rlogoDP=189; rNsEucl=129; rNSW=180; rank_mean=149.400; match_rank= a 0 0 0 0 0 0 18616 9947 90866 98352 473 13246 99294 268 13829 55312 c 0 0 0 0 0 0 35017 68409 2806 422 333 40460 76 93 618 1915 g 0 0 0 0 0 0 33825 3599 764 228 66 42828 333 1291 3298 40381 t 0 0 0 0 0 0 12542 18045 5565 998 99128 3466 297 98348 82255 2392

AT4G17950_M0119_1.02_CISBP_shift6 (AT4G17950:M0119_1.02:CISBP) 0.745 0.745 5.494 0.897 0.894 278 33 172 115 152 150.000
; 1_m6_assembly_6 versus AT4G17950_M0119_1.02_CISBP (AT4G17950:M0119_1.02:CISBP); m=62/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 150; ------dAWWTAWWta ; cor=0.745; Ncor=0.745; logoDP=5.494; NsEucl=0.897; NSW=0.894; rcor=278; rNcor=33; rlogoDP=172; rNsEucl=115; rNSW=152; rank_mean=150.000; match_rank= a 0 0 0 0 0 0 25 83 29 70 0 80 69 30 21 32 c 0 0 0 0 0 0 15 2 0 0 0 0 0 0 10 23 g 0 0 0 0 0 0 25 2 0 0 0 0 0 0 10 22 t 0 0 0 0 0 0 35 13 71 30 100 20 31 70 59 23

LMI1.ampDAP_M0411_AthalianaCistrome_rc_shift4 (LMI1.ampDAP:M0411:AthalianaCistrome_rc) 0.833 0.641 0.176 0.904 0.909 83 104 398 74 101 152.000
; 1_m6_assembly_6 versus LMI1.ampDAP_M0411_AthalianaCistrome_rc (LMI1.ampDAP:M0411:AthalianaCistrome_rc); m=63/128; ncol2=13; w=-2; offset=-2; strand=R; shift=4; score= 152; ----aamCAATAATTG ; cor=0.833; Ncor=0.641; logoDP=0.176; NsEucl=0.904; NSW=0.909; rcor=83; rNcor=104; rlogoDP=398; rNsEucl=74; rNSW=101; rank_mean=152.000; match_rank= a 0 0 0 0 244 337 151 32 598 598 0 592 598 0 34 25 c 0 0 0 0 117 36 211 515 0 0 0 0 0 0 0 66 g 0 0 0 0 90 97 98 0 0 0 0 0 0 0 63 492 t 0 0 0 0 147 128 138 51 0 0 598 6 0 598 501 15

CmMAF2_EEAD0072_EEADannot_shift5 (CmMAF2:EEAD0072:EEADannot) 0.778 0.637 7.915 0.888 0.887 181 109 81 195 197 152.600
; 1_m6_assembly_6 versus CmMAF2_EEAD0072_EEADannot (CmMAF2:EEAD0072:EEADannot); m=64/128; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score= 152.6; -----CwwAwwAAwG- ; cor=0.778; Ncor=0.637; logoDP=7.915; NsEucl=0.888; NSW=0.887; rcor=181; rNcor=109; rlogoDP=81; rNsEucl=195; rNSW=197; rank_mean=152.600; match_rank= a 0 0 0 0 0 0 1 1 3 2 1 3 3 1 0 0 c 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 t 0 0 0 0 0 0 2 2 0 1 2 0 0 2 0 0

YAB5_UN0416.1_JASPAR_rc_shift6 (YAB5:UN0416.1:JASPAR_rc) 0.779 0.649 0.738 0.904 0.907 180 94 333 75 106 157.600
; 1_m6_assembly_6 versus YAB5_UN0416.1_JASPAR_rc (YAB5:UN0416.1:JASPAR_rc); m=65/128; ncol2=12; w=0; offset=0; strand=R; shift=6; score= 157.6; ------tsdwTAATtA ; cor=0.779; Ncor=0.649; logoDP=0.738; NsEucl=0.904; NSW=0.907; rcor=180; rNcor=94; rlogoDP=333; rNsEucl=75; rNSW=106; rank_mean=157.600; match_rank= a 0 0 0 0 0 0 224 200 270 447 0.34 904 809 0.34 26 752 c 0 0 0 0 0 0 224 303 172 153 0.34 0.34 96 0.34 227 51 g 0 0 0 0 0 0 224 297 276 52 94 0.34 0.34 96 121 51 t 0 0 0 0 0 0 328 200 282.79 348 904.83 95 94 903 625 147

AHL12_AHL12_2_ArabidopsisPBM_rc_shift8 (AHL12:AHL12_2:ArabidopsisPBM_rc) 0.831 0.554 3.454 0.893 0.909 88 222 262 137 100 161.800
; 1_m6_assembly_6 versus AHL12_AHL12_2_ArabidopsisPBM_rc (AHL12:AHL12_2:ArabidopsisPBM_rc); m=66/128; ncol2=10; w=0; offset=2; strand=R; shift=8; score= 161.8; --------AwwAWWTw ; cor=0.831; Ncor=0.554; logoDP=3.454; NsEucl=0.893; NSW=0.909; rcor=88; rNcor=222; rlogoDP=262; rNsEucl=137; rNSW=100; rank_mean=161.800; match_rank= a 0 0 0 0 0 0 0 0 74 56 37 79 74 25 20 59 c 0 0 0 0 0 0 0 0 3 2 2 0 0 1 1 2 g 0 0 0 0 0 0 0 0 18 2 2 1 1 0 0 2 t 0 0 0 0 0 0 0 0 5 40 59 20 25 74 79 37

ATHB53.ampDAP_M0420_AthalianaCistrome_rc_shift3 (ATHB53.ampDAP:M0420:AthalianaCistrome_rc) 0.828 0.552 0.241 0.909 0.917 89 226 382 53 73 164.600
; 1_m6_assembly_6 versus ATHB53.ampDAP_M0420_AthalianaCistrome_rc (ATHB53.ampDAP:M0420:AthalianaCistrome_rc); m=67/128; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score= 164.6; ---rmahCAATwATTk ; cor=0.828; Ncor=0.552; logoDP=0.241; NsEucl=0.909; NSW=0.917; rcor=89; rNcor=226; rlogoDP=382; rNsEucl=53; rNSW=73; rank_mean=164.600; match_rank= a 0 0 0 164 167 319 160 7 592 592 0 295 592 0 54 117 c 0 0 0 112 195 61 211 541 0 0 0 50 0 0 9 44 g 0 0 0 185 136 77 72 0 0 0 0 36 0 0 84 270 t 0 0 0 131 94 135 149 44 0 0 592 211 0 592 445 161

ZHD1_MA1329.2_JASPAR_shift6 (ZHD1:MA1329.2:JASPAR) 0.764 0.587 7.353 0.895 0.889 217 185 114 131 183 166.000
; 1_m6_assembly_6 versus ZHD1_MA1329.2_JASPAR (ZHD1:MA1329.2:JASPAR); m=68/128; ncol2=13; w=0; offset=0; strand=D; shift=6; score= 166; ------wwAyTAATTA ; cor=0.764; Ncor=0.587; logoDP=7.353; NsEucl=0.895; NSW=0.889; rcor=217; rNcor=185; rlogoDP=114; rNsEucl=131; rNSW=183; rank_mean=166.000; match_rank= a 0 0 0 0 0 0 834 967 1813 386 47 2412 2417 25 19 2382 c 0 0 0 0 0 0 351 422 246 1155 24 14 15 29 43 14 g 0 0 0 0 0 0 309 333 193 193 9 26 18 9 12 25 t 0 0 0 0 0 0 978 750 220 738 2392 20 22 2409 2398 51

AHL12_AHL12_ArabidopsisPBM_rc_shift6 (AHL12:AHL12:ArabidopsisPBM_rc) 0.742 0.742 4.018 0.897 0.894 291 34 237 116 155 166.600
; 1_m6_assembly_6 versus AHL12_AHL12_ArabidopsisPBM_rc (AHL12:AHL12:ArabidopsisPBM_rc); m=69/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 166.6; ------wAAwwwwTTw ; cor=0.742; Ncor=0.742; logoDP=4.018; NsEucl=0.897; NSW=0.894; rcor=291; rNcor=34; rlogoDP=237; rNsEucl=116; rNSW=155; rank_mean=166.600; match_rank= a 0 0 0 0 0 0 37 77 84 48 33 66 50 10 6 42 c 0 0 0 0 0 0 14 2 4 1 1 0 0 2 15 13 g 0 0 0 0 0 0 11 15 2 1 0 1 2 4 2 8 t 0 0 0 0 0 0 38 6 10 50 66 33 48 84 77 37

ATHB-4_M0845_1.02_CISBP_shift6 (ATHB-4:M0845_1.02:CISBP) 0.748 0.748 2.822 0.897 0.894 266 32 283 118 158 171.400
; 1_m6_assembly_6 versus ATHB-4_M0845_1.02_CISBP (ATHB-4:M0845_1.02:CISBP); m=70/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 171.4; ------syAATcAttr ; cor=0.748; Ncor=0.748; logoDP=2.822; NsEucl=0.897; NSW=0.894; rcor=266; rNcor=32; rlogoDP=283; rNsEucl=118; rNSW=158; rank_mean=171.400; match_rank= a 0 0 0 0 0 0 17 11 77 79 12 13 75 23 22 30 c 0 0 0 0 0 0 35 48 7 9 4 59 6 13 20 18 g 0 0 0 0 0 0 27 4 3 5 7 14 8 11 20 29 t 0 0 0 0 0 0 21 37 13 7 77 14 11 53 38 23

HAT2_MA1198.1_JASPAR_shift5 (HAT2:MA1198.1:JASPAR) 0.735 0.668 8.609 0.889 0.877 317 80 65 173 251 177.200
; 1_m6_assembly_6 versus HAT2_MA1198.1_JASPAR (HAT2:MA1198.1:JASPAR); m=71/128; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score= 177.2; -----wyyAATCATtw ; cor=0.735; Ncor=0.668; logoDP=8.609; NsEucl=0.889; NSW=0.877; rcor=317; rNcor=80; rlogoDP=65; rNsEucl=173; rNSW=251; rank_mean=177.200; match_rank= a 0 0 0 0 0 300 110 0 598 598 0 0 598 113 114 229 c 0 0 0 0 0 23 186 249 0 0 0 541 0 12 42 52 g 0 0 0 0 0 43 112 0 0 0 0 0 0 0 36 131 t 0 0 0 0 0 232 190 349 0 0 598 57 0 473 406 186

HAT1_M0851_1.02_CISBP_shift6 (HAT1:M0851_1.02:CISBP) 0.723 0.723 9.027 0.886 0.870 347 46 48 209 301 190.200
; 1_m6_assembly_6 versus HAT1_M0851_1.02_CISBP (HAT1:M0851_1.02:CISBP); m=72/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 190.2; ------syAATCATkr ; cor=0.723; Ncor=0.723; logoDP=9.027; NsEucl=0.886; NSW=0.870; rcor=347; rNcor=46; rlogoDP=48; rNsEucl=209; rNSW=301; rank_mean=190.200; match_rank= a 0 0 0 0 0 0 15 7 100 100 0 0 100 10 10 35 c 0 0 0 0 0 0 37 50 0 0 0 100 0 0 10 18 g 0 0 0 0 0 0 33 7 0 0 0 0 0 0 29 29 t 0 0 0 0 0 0 15 36 0 0 100 0 0 90 51 18

HAT1_MA1024.1_JASPAR_shift6 (HAT1:MA1024.1:JASPAR) 0.722 0.722 9.035 0.886 0.870 348 47 46 210 304 191.000
; 1_m6_assembly_6 versus HAT1_MA1024.1_JASPAR (HAT1:MA1024.1:JASPAR); m=73/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 191; ------syAATCATkr ; cor=0.722; Ncor=0.722; logoDP=9.035; NsEucl=0.886; NSW=0.870; rcor=348; rNcor=47; rlogoDP=46; rNsEucl=210; rNSW=304; rank_mean=191.000; match_rank= a 0 0 0 0 0 0 149 69 1000 1000 0 0 1000 98 101 349 c 0 0 0 0 0 0 374 506 0 0 0 1000 0 0 101 181 g 0 0 0 0 0 0 328 69 0 0 0 0 0 0 286 289 t 0 0 0 0 0 0 149 356 0 0 1000 0 0 902 512 181

ATHB18.ampDAP_M0433_AthalianaCistrome_shift6 (ATHB18.ampDAP:M0433:AthalianaCistrome) 0.736 0.669 9.521 0.885 0.868 314 79 34 216 314 191.400
; 1_m6_assembly_6 versus ATHB18.ampDAP_M0433_AthalianaCistrome (ATHB18.ampDAP:M0433:AthalianaCistrome); m=74/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 191.4; ------myAATGATTr ; cor=0.736; Ncor=0.669; logoDP=9.521; NsEucl=0.885; NSW=0.868; rcor=314; rNcor=79; rlogoDP=34; rNsEucl=216; rNSW=314; rank_mean=191.400; match_rank= a 0 0 0 0 0 0 154 66 571 592 0 97 592 0 1 200 c 0 0 0 0 0 0 185 334 6 0 0 0 0 0 0 0 g 0 0 0 0 0 0 119 8 4 0 0 457 0 0 7 392 t 0 0 0 0 0 0 134 184 11 0 592 38 0 592 584 0

TRANSCRIPTION_1qn8_B_3D-footprint_shift4 (TRANSCRIPTION:1qn8_B:3D-footprint) 0.845 0.423 6.249 0.880 0.913 70 410 139 262 82 192.600
; 1_m6_assembly_6 versus TRANSCRIPTION_1qn8_B_3D-footprint (TRANSCRIPTION:1qn8_B:3D-footprint); m=75/128; ncol2=8; w=-2; offset=-2; strand=D; shift=4; score= 192.6; ----CTTTAATA---- ; cor=0.845; Ncor=0.423; logoDP=6.249; NsEucl=0.880; NSW=0.913; rcor=70; rNcor=410; rlogoDP=139; rNsEucl=262; rNSW=82; rank_mean=192.600; match_rank= a 0 0 0 0 9 0 11 0 96 67 0 96 0 0 0 0 c 0 0 0 0 67 0 9 0 0 11 0 0 0 0 0 0 g 0 0 0 0 9 0 9 0 0 9 0 0 0 0 0 0 t 0 0 0 0 11 96 67 96 0 9 96 0 0 0 0 0

ATHB-5_MA0110.3_JASPAR_shift5 (ATHB-5:MA0110.3:JASPAR) 0.736 0.613 7.546 0.890 0.878 316 139 105 166 242 193.600
; 1_m6_assembly_6 versus ATHB-5_MA0110.3_JASPAR (ATHB-5:MA0110.3:JASPAR); m=76/128; ncol2=12; w=-1; offset=-1; strand=D; shift=5; score= 193.6; -----wwCAATCATTw ; cor=0.736; Ncor=0.613; logoDP=7.546; NsEucl=0.890; NSW=0.878; rcor=316; rNcor=139; rlogoDP=105; rNsEucl=166; rNSW=242; rank_mean=193.600; match_rank= a 0 0 0 0 0 3639 2718 1051 9632 9563 230 841 9809 648 633 3099 c 0 0 0 0 0 1914 2228 7517 197 154 98 8049 48 178 312 1661 g 0 0 0 0 0 1346 1336 386 74 50 59 254 51 175 394 2309 t 0 0 0 0 0 3223 3840 1168 219 355 9735 978 214 9121 8783 3053

HB68_GT1_B73_1_m1_EEAD0409_EEADannot_shift5 (HB68_GT1_B73_1_m1:EEAD0409:EEADannot) 0.742 0.675 10.042 0.882 0.861 287 72 18 250 348 195.000
; 1_m6_assembly_6 versus HB68_GT1_B73_1_m1_EEAD0409_EEADannot (HB68_GT1_B73_1_m1:EEAD0409:EEADannot); m=77/128; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score= 195; -----ACCAATwATTG ; cor=0.742; Ncor=0.675; logoDP=10.042; NsEucl=0.882; NSW=0.861; rcor=287; rNcor=72; rlogoDP=18; rNsEucl=250; rNSW=348; rank_mean=195.000; match_rank= a 0 0 0 0 0 86 6 4 100 100 0 54 100 0 5 10 c 0 0 0 0 0 2 76 93 0 0 0 1 0 0 1 1 g 0 0 0 0 0 8 0 0 0 0 0 6 0 0 2 78 t 0 0 0 0 0 4 18 3 0 0 100 39 0 100 92 11

YAB5_YAB5_ArabidopsisPBM_rc_shift6 (YAB5:YAB5:ArabidopsisPBM_rc) 0.729 0.729 2.051 0.895 0.889 335 43 295 132 186 198.200
; 1_m6_assembly_6 versus YAB5_YAB5_ArabidopsisPBM_rc (YAB5:YAB5:ArabidopsisPBM_rc); m=78/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 198.2; ------dTAaTcATtw ; cor=0.729; Ncor=0.729; logoDP=2.051; NsEucl=0.895; NSW=0.889; rcor=335; rNcor=43; rlogoDP=295; rNsEucl=132; rNSW=186; rank_mean=198.200; match_rank= a 0 0 0 0 0 0 29 4 71 66 15 5 74 8 21 27 c 0 0 0 0 0 0 16 6 10 5 3 53 3 5 18 22 g 0 0 0 0 0 0 26 17 4 19 4 24 16 9 8 23 t 0 0 0 0 0 0 29 73 15 10 78 18 7 78 53 28

ATHB24.ampDAP_M0858_AthalianaCistrome_shift5 (ATHB24.ampDAP:M0858:AthalianaCistrome) 0.751 0.501 6.604 0.893 0.885 256 289 127 140 205 203.400
; 1_m6_assembly_6 versus ATHB24.ampDAP_M0858_AthalianaCistrome (ATHB24.ampDAP:M0858:AthalianaCistrome); m=79/128; ncol2=15; w=-1; offset=-1; strand=D; shift=5; score= 203.4; -----aawwrTAATTA ; cor=0.751; Ncor=0.501; logoDP=6.604; NsEucl=0.893; NSW=0.885; rcor=256; rNcor=289; rlogoDP=127; rNsEucl=140; rNSW=205; rank_mean=203.400; match_rank= a 0 0 0 0 0 400 354 295 236 240 6 496 592 0 0 597 c 0 0 0 0 0 48 53 53 111 39 14 10 0 0 0 0 g 0 0 0 0 0 28 47 47 82 200 0 94 8 0 0 2 t 0 0 0 0 0 124 146 205 171 121 580 0 0 600 600 1

ATHB12_ATHB12_ArabidopsisPBM_rc_shift6 (ATHB12:ATHB12:ArabidopsisPBM_rc) 0.725 0.725 3.650 0.891 0.882 342 45 256 158 224 205.000
; 1_m6_assembly_6 versus ATHB12_ATHB12_ArabidopsisPBM_rc (ATHB12:ATHB12:ArabidopsisPBM_rc); m=80/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 205; ------cCAATcAtta ; cor=0.725; Ncor=0.725; logoDP=3.650; NsEucl=0.891; NSW=0.882; rcor=342; rNcor=45; rlogoDP=256; rNsEucl=158; rNSW=224; rank_mean=205.000; match_rank= a 0 0 0 0 0 0 6 9 94 96 1 12 93 23 12 36 c 0 0 0 0 0 0 56 77 2 2 1 63 1 5 11 24 g 0 0 0 0 0 0 14 2 1 1 1 20 4 5 19 18 t 0 0 0 0 0 0 24 12 3 1 97 5 2 67 58 22

estExt_gwp_gw1.C_70211_M1195_1.02_CISBP_rc_shift6 (estExt_gwp_gw1.C_70211:M1195_1.02:CISBP_rc) 0.714 0.714 2.860 0.893 0.885 382 53 282 145 207 213.800
; 1_m6_assembly_6 versus estExt_gwp_gw1.C_70211_M1195_1.02_CISBP_rc (estExt_gwp_gw1.C_70211:M1195_1.02:CISBP_rc); m=81/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 213.8; ------csmaTkATtr ; cor=0.714; Ncor=0.714; logoDP=2.860; NsEucl=0.893; NSW=0.885; rcor=382; rNcor=53; rlogoDP=282; rNsEucl=145; rNSW=207; rank_mean=213.800; match_rank= a 0 0 0 0 0 0 20 21 36 60 0 18 100 0 0 28 c 0 0 0 0 0 0 33 30 31 13 7 18 0 0 16 11 g 0 0 0 0 0 0 24 26 11 14 0 33 0 11 18 45 t 0 0 0 0 0 0 23 23 22 13 93 31 0 89 66 16

AHL25_AHL25_3_ArabidopsisPBM_shift6 (AHL25:AHL25_3:ArabidopsisPBM) 0.705 0.705 4.112 0.891 0.881 427 57 229 161 230 220.800
; 1_m6_assembly_6 versus AHL25_AHL25_3_ArabidopsisPBM (AHL25:AHL25_3:ArabidopsisPBM); m=82/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 220.8; ------waWwWwAwTw ; cor=0.705; Ncor=0.705; logoDP=4.112; NsEucl=0.891; NSW=0.881; rcor=427; rNcor=57; rlogoDP=229; rNsEucl=161; rNSW=230; rank_mean=220.800; match_rank= a 0 0 0 0 0 0 37 54 74 39 29 49 83 38 8 28 c 0 0 0 0 0 0 18 9 0 0 0 0 0 0 3 9 g 0 0 0 0 0 0 16 15 1 0 0 0 1 0 6 7 t 0 0 0 0 0 0 29 22 25 61 71 51 16 62 83 56

AL3G51890.t2_HOMEOBOX_1_AT2G18550_EEAD0587_EEADannot_shift6 (AL3G51890.t2_HOMEOBOX_1_AT2G18550:EEAD0587:EEADannot) 0.742 0.571 9.836 0.883 0.863 288 206 27 244 340 221.000
; 1_m6_assembly_6 versus AL3G51890.t2_HOMEOBOX_1_AT2G18550_EEAD0587_EEADannot (AL3G51890.t2_HOMEOBOX_1_AT2G18550:EEAD0587:EEADannot); m=83/128; ncol2=13; w=0; offset=0; strand=D; shift=6; score= 221; ------hCAATwATTG ; cor=0.742; Ncor=0.571; logoDP=9.836; NsEucl=0.883; NSW=0.863; rcor=288; rNcor=206; rlogoDP=27; rNsEucl=244; rNSW=340; rank_mean=221.000; match_rank= a 0 0 0 0 0 0 34 15 97 100 0 45 100 0 0 2 c 0 0 0 0 0 0 38 78 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 2 1 0 0 0 2 0 0 0 95 t 0 0 0 0 0 0 26 6 3 0 100 53 0 100 100 3

HAT22_MA1210.1_JASPAR_shift5 (HAT22:MA1210.1:JASPAR) 0.740 0.605 9.067 0.877 0.863 297 152 45 282 339 223.000
; 1_m6_assembly_6 versus HAT22_MA1210.1_JASPAR (HAT22:MA1210.1:JASPAR); m=84/128; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score= 223; -----myyAATCATT- ; cor=0.740; Ncor=0.605; logoDP=9.067; NsEucl=0.877; NSW=0.863; rcor=297; rNcor=152; rlogoDP=45; rNsEucl=282; rNSW=339; rank_mean=223.000; match_rank= a 0 0 0 0 0 53 27 4 131 132 0 0 131 1 17 0 c 0 0 0 0 0 36 47 58 1 0 2 127 1 2 10 0 g 0 0 0 0 0 21 17 0 0 0 0 5 0 1 14 0 t 0 0 0 0 0 22 41 70 0 0 130 0 0 128 91 0

ATHB-5_MA0110.2_JASPAR_rc_shift7 (ATHB-5:MA0110.2:JASPAR_rc) 0.797 0.513 1.114 0.888 0.887 146 275 325 196 198 228.000
; 1_m6_assembly_6 versus ATHB-5_MA0110.2_JASPAR_rc (ATHB-5:MA0110.2:JASPAR_rc); m=85/128; ncol2=13; w=0; offset=1; strand=R; shift=7; score= 228; -------CAATaATTG ; cor=0.797; Ncor=0.513; logoDP=1.114; NsEucl=0.888; NSW=0.887; rcor=146; rNcor=275; rlogoDP=325; rNsEucl=196; rNSW=198; rank_mean=228.000; match_rank= a 0 0 0 0 0 0 0 1 39 39 0 22 39 0 1 3 c 0 0 0 0 0 0 0 7 0 0 0 7 0 0 0 4 g 0 0 0 0 0 0 0 0 0 0 0 8 0 0 6 32 t 0 0 0 0 0 0 0 0 0 0 39 2 0 39 32 0

ATHB-23_MA1327.3_JASPAR_shift10 (ATHB-23:MA1327.3:JASPAR) 0.820 0.447 6.290 0.864 0.890 100 367 135 371 182 231.000
; 1_m6_assembly_6 versus ATHB-23_MA1327.3_JASPAR (ATHB-23:MA1327.3:JASPAR); m=86/128; ncol2=7; w=0; offset=4; strand=D; shift=10; score= 231; ----------tAATTA ; cor=0.820; Ncor=0.447; logoDP=6.290; NsEucl=0.864; NSW=0.890; rcor=100; rNcor=367; rlogoDP=135; rNsEucl=371; rNSW=182; rank_mean=231.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 466 2432 2432 0 0 2432 c 0 0 0 0 0 0 0 0 0 0 226 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 103 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1637 0 0 2432 2432 0

HAT1.DAP_M0444_AthalianaCistrome_rc_shift2 (HAT1.DAP:M0444:AthalianaCistrome_rc) 0.750 0.500 4.474 0.889 0.878 259 290 204 169 246 233.600
; 1_m6_assembly_6 versus HAT1.DAP_M0444_AthalianaCistrome_rc (HAT1.DAP:M0444:AthalianaCistrome_rc); m=87/128; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score= 233.6; --wtwwyyAATCATTr ; cor=0.750; Ncor=0.500; logoDP=4.474; NsEucl=0.889; NSW=0.878; rcor=259; rNcor=290; rlogoDP=204; rNsEucl=169; rNSW=246; rank_mean=233.600; match_rank= a 0 0 97 48 89 101 42 0 218 218 0 13 218 0 34 85 c 0 0 22 33 16 28 80 113 0 0 0 191 0 0 0 19 g 0 0 11 24 23 31 40 0 0 0 0 14 0 0 1 62 t 0 0 88 113 90 58 56 105 0 0 218 0 0 218 183 52

HB68_GT1_Mo17_1_EEAD0410_EEADannot_rc_shift6 (HB68_GT1_Mo17_1:EEAD0410:EEADannot_rc) 0.748 0.534 6.834 0.885 0.867 269 247 125 219 316 235.200
; 1_m6_assembly_6 versus HB68_GT1_Mo17_1_EEAD0410_EEADannot_rc (HB68_GT1_Mo17_1:EEAD0410:EEADannot_rc); m=88/128; ncol2=14; w=0; offset=0; strand=R; shift=6; score= 235.2; ------hCAATwATTG ; cor=0.748; Ncor=0.534; logoDP=6.834; NsEucl=0.885; NSW=0.867; rcor=269; rNcor=247; rlogoDP=125; rNsEucl=219; rNSW=316; rank_mean=235.200; match_rank= a 0 0 0 0 0 0 28 10 90 100 0 54 100 0 0 1 c 0 0 0 0 0 0 38 80 1 0 0 4 0 0 0 0 g 0 0 0 0 0 0 9 1 3 0 0 2 0 0 0 98 t 0 0 0 0 0 0 25 9 6 0 100 40 0 100 100 1

AHL13_MA2374.1_JASPAR_shift7 (AHL13:MA2374.1:JASPAR) 0.751 0.601 5.507 0.874 0.873 255 159 171 309 287 236.200
; 1_m6_assembly_6 versus AHL13_MA2374.1_JASPAR (AHL13:MA2374.1:JASPAR); m=89/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 236.2; -------AWWTAWWt- ; cor=0.751; Ncor=0.601; logoDP=5.507; NsEucl=0.874; NSW=0.873; rcor=255; rNcor=159; rlogoDP=171; rNsEucl=309; rNSW=287; rank_mean=236.200; match_rank= a 0 0 0 0 0 0 0 831 292 701 0 802 686 297 213 0 c 0 0 0 0 0 0 0 24 0 0 0 0 0 0 97 0 g 0 0 0 0 0 0 0 24 0 0 0 0 0 0 97 0 t 0 0 0 0 0 0 0 119 706 297 999 197 312 701 592 0

HAT1.ampDAP_M0445_AthalianaCistrome_rc_shift6 (HAT1.ampDAP:M0445:AthalianaCistrome_rc) 0.709 0.645 9.094 0.879 0.853 407 100 43 268 381 239.800
; 1_m6_assembly_6 versus HAT1.ampDAP_M0445_AthalianaCistrome_rc (HAT1.ampDAP:M0445:AthalianaCistrome_rc); m=90/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 239.8; ------yyAATCATTr ; cor=0.709; Ncor=0.645; logoDP=9.094; NsEucl=0.879; NSW=0.853; rcor=407; rNcor=100; rlogoDP=43; rNsEucl=268; rNSW=381; rank_mean=239.800; match_rank= a 0 0 0 0 0 0 21 1 129 130 0 0 130 0 11 43 c 0 0 0 0 0 0 40 63 1 0 0 129 0 0 0 10 g 0 0 0 0 0 0 26 0 0 0 0 0 0 0 1 54 t 0 0 0 0 0 0 43 66 0 0 130 1 0 130 118 23

TRANSCRIPTION_1qnc_B_3D-footprint_rc_shift8 (TRANSCRIPTION:1qnc_B:3D-footprint_rc) 0.790 0.632 0.191 0.876 0.878 158 119 394 287 245 240.600
; 1_m6_assembly_6 versus TRANSCRIPTION_1qnc_B_3D-footprint_rc (TRANSCRIPTION:1qnc_B:3D-footprint_rc); m=91/128; ncol2=8; w=0; offset=2; strand=R; shift=8; score= 240.6; --------AATAAmAs ; cor=0.790; Ncor=0.632; logoDP=0.191; NsEucl=0.876; NSW=0.878; rcor=158; rNcor=119; rlogoDP=394; rNsEucl=287; rNSW=245; rank_mean=240.600; match_rank= a 0 0 0 0 0 0 0 0 96 96 0 96 96 43 96 13 c 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 27 g 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 54 t 0 0 0 0 0 0 0 0 0 0 96 0 0 13 0 2

AHL20_AHL20_3_ArabidopsisPBM_rc_shift5 (AHL20:AHL20_3:ArabidopsisPBM_rc) 0.731 0.598 3.863 0.884 0.879 332 165 248 226 236 241.400
; 1_m6_assembly_6 versus AHL20_AHL20_3_ArabidopsisPBM_rc (AHL20:AHL20_3:ArabidopsisPBM_rc); m=92/128; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score= 241.4; -----tAwwWWwwTa- ; cor=0.731; Ncor=0.598; logoDP=3.863; NsEucl=0.884; NSW=0.879; rcor=332; rNcor=165; rlogoDP=248; rNsEucl=226; rNSW=236; rank_mean=241.400; match_rank= a 0 0 0 0 0 19 89 40 37 69 28 61 58 3 42 0 c 0 0 0 0 0 11 5 1 1 3 0 1 1 3 21 0 g 0 0 0 0 0 22 3 1 1 0 2 1 1 5 20 0 t 0 0 0 0 0 48 3 58 61 28 70 37 40 89 17 0

ATHB-15_MA1026.3_JASPAR_shift3 (ATHB-15:MA1026.3:JASPAR) 0.721 0.555 9.015 0.882 0.860 352 218 49 252 351 244.400
; 1_m6_assembly_6 versus ATHB-15_MA1026.3_JASPAR (ATHB-15:MA1026.3:JASPAR); m=93/128; ncol2=13; w=-3; offset=-3; strand=D; shift=3; score= 244.4; ---awwrTAATGATkA ; cor=0.721; Ncor=0.555; logoDP=9.015; NsEucl=0.882; NSW=0.860; rcor=352; rNcor=218; rlogoDP=49; rNsEucl=252; rNSW=351; rank_mean=244.400; match_rank= a 0 0 0 363 268 212 199 13 518 590 0 27 590 0 10 494 c 0 0 0 31 35 63 46 97 1 0 0 82 0 0 0 1 g 0 0 0 84 60 131 329 0 68 0 0 462 0 0 218 87 t 0 0 0 112 227 184 16 480 3 0 590 19 0 590 362 8

ATHB-12_MA0950.1_JASPAR_rc_shift7 (ATHB-12:MA0950.1:JASPAR_rc) 0.759 0.608 3.608 0.874 0.874 231 149 257 305 284 245.200
; 1_m6_assembly_6 versus ATHB-12_MA0950.1_JASPAR_rc (ATHB-12:MA0950.1:JASPAR_rc); m=94/128; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 245.2; -------CAATcAtt- ; cor=0.759; Ncor=0.608; logoDP=3.608; NsEucl=0.874; NSW=0.874; rcor=231; rNcor=149; rlogoDP=257; rNsEucl=305; rNSW=284; rank_mean=245.200; match_rank= a 0 0 0 0 0 0 0 88 940 966 13 118 941 233 124 0 c 0 0 0 0 0 0 0 766 19 17 15 633 6 53 107 0 g 0 0 0 0 0 0 0 18 10 8 7 201 35 46 191 0 t 0 0 0 0 0 0 0 128 30 9 965 48 18 668 579 0

ATHB-7_MA0954.3_JASPAR_rc_shift6 (ATHB-7:MA0954.3:JASPAR_rc) 0.709 0.644 7.998 0.879 0.853 410 102 80 266 379 247.400
; 1_m6_assembly_6 versus ATHB-7_MA0954.3_JASPAR_rc (ATHB-7:MA0954.3:JASPAR_rc); m=95/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 247.4; ------yCAATCATTg ; cor=0.709; Ncor=0.644; logoDP=7.998; NsEucl=0.879; NSW=0.853; rcor=410; rNcor=102; rlogoDP=80; rNsEucl=266; rNSW=379; rank_mean=247.400; match_rank= a 0 0 0 0 0 0 49 9 598 600 0 132 598 37 54 66 c 0 0 0 0 0 0 181 551 2 0 0 464 1 0 11 92 g 0 0 0 0 0 0 46 3 0 0 0 2 1 3 62 389 t 0 0 0 0 0 0 324 37 0 0 600 2 0 560 473 53

ANL2_M0850_1.02_CISBP_rc_shift6 (ANL2:M0850_1.02:CISBP_rc) 0.704 0.640 6.143 0.884 0.865 431 105 147 228 328 247.800
; 1_m6_assembly_6 versus ANL2_M0850_1.02_CISBP_rc (ANL2:M0850_1.02:CISBP_rc); m=96/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 247.8; ------kCATTWATta ; cor=0.704; Ncor=0.640; logoDP=6.143; NsEucl=0.884; NSW=0.865; rcor=431; rNcor=105; rlogoDP=147; rNsEucl=228; rNSW=328; rank_mean=247.800; match_rank= a 0 0 0 0 0 0 19 8 94 8 0 74 100 8 6 50 c 0 0 0 0 0 0 19 75 2 0 0 0 0 0 6 17 g 0 0 0 0 0 0 30 8 2 0 0 0 0 0 21 17 t 0 0 0 0 0 0 32 9 2 92 100 26 0 92 67 16

ZHD1_MA1329.3_JASPAR_shift8 (ZHD1:MA1329.3:JASPAR) 0.762 0.554 7.348 0.869 0.864 223 221 115 345 338 248.400
; 1_m6_assembly_6 versus ZHD1_MA1329.3_JASPAR (ZHD1:MA1329.3:JASPAR); m=97/128; ncol2=9; w=0; offset=2; strand=D; shift=8; score= 248.4; --------AyTAATTA ; cor=0.762; Ncor=0.554; logoDP=7.348; NsEucl=0.869; NSW=0.864; rcor=223; rNcor=221; rlogoDP=115; rNsEucl=345; rNSW=338; rank_mean=248.400; match_rank= a 0 0 0 0 0 0 0 0 1813 386 47 2412 2417 25 19 2382 c 0 0 0 0 0 0 0 0 246 1155 24 14 15 29 43 14 g 0 0 0 0 0 0 0 0 193 193 9 26 18 9 12 25 t 0 0 0 0 0 0 0 0 220 738 2392 20 22 2409 2398 51

HAT1_MA1024.2_JASPAR_shift7 (HAT1:MA1024.2:JASPAR) 0.743 0.595 9.032 0.864 0.853 284 168 47 370 378 249.400
; 1_m6_assembly_6 versus HAT1_MA1024.2_JASPAR (HAT1:MA1024.2:JASPAR); m=98/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 249.4; -------yAATCATk- ; cor=0.743; Ncor=0.595; logoDP=9.032; NsEucl=0.864; NSW=0.853; rcor=284; rNcor=168; rlogoDP=47; rNsEucl=370; rNSW=378; rank_mean=249.400; match_rank= a 0 0 0 0 0 0 0 69 1000 1000 0 0 1000 98 101 0 c 0 0 0 0 0 0 0 506 0 0 0 1000 0 0 101 0 g 0 0 0 0 0 0 0 69 0 0 0 0 0 0 286 0 t 0 0 0 0 0 0 0 356 0 0 1000 0 0 902 512 0

ZAT6_UN0381.1_JASPAR_rc_shift5 (ZAT6:UN0381.1:JASPAR_rc) 0.718 0.599 4.391 0.886 0.870 362 164 212 212 306 251.200
; 1_m6_assembly_6 versus ZAT6_UN0381.1_JASPAR_rc (ZAT6:UN0381.1:JASPAR_rc); m=99/128; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score= 251.2; -----wwCAATCATTw ; cor=0.718; Ncor=0.599; logoDP=4.391; NsEucl=0.886; NSW=0.870; rcor=362; rNcor=164; rlogoDP=212; rNsEucl=212; rNSW=306; rank_mean=251.200; match_rank= a 0 0 0 0 0 3205 2318 1077 8080 8084 182 317 8247 575 647 2681 c 0 0 0 0 0 1611 1824 5912 213 173 82 7885 45 164 310 1459 g 0 0 0 0 0 1165 1175 410 77 37 56 40 82 170 393 1840 t 0 0 0 0 0 2603 3267 1185 214 290 8264 342 210 7675 7234 2604

HAT2_MA1198.2_JASPAR_shift7 (HAT2:MA1198.2:JASPAR) 0.742 0.594 8.604 0.865 0.853 289 171 66 369 376 254.200
; 1_m6_assembly_6 versus HAT2_MA1198.2_JASPAR (HAT2:MA1198.2:JASPAR); m=100/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 254.2; -------yAATCATt- ; cor=0.742; Ncor=0.594; logoDP=8.604; NsEucl=0.865; NSW=0.853; rcor=289; rNcor=171; rlogoDP=66; rNsEucl=369; rNSW=376; rank_mean=254.200; match_rank= a 0 0 0 0 0 0 0 0 598 598 0 0 598 113 114 0 c 0 0 0 0 0 0 0 249 0 0 0 541 0 12 42 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 t 0 0 0 0 0 0 0 349 0 0 598 57 0 473 406 0

ATHB5_ATHB5_Athamap_rc_shift7 (ATHB5:ATHB5:Athamap_rc) 0.781 0.502 1.114 0.882 0.875 173 286 325 249 268 260.200
; 1_m6_assembly_6 versus ATHB5_ATHB5_Athamap_rc (ATHB5:ATHB5:Athamap_rc); m=101/128; ncol2=13; w=0; offset=1; strand=R; shift=7; score= 260.2; -------CAATaATTG ; cor=0.781; Ncor=0.502; logoDP=1.114; NsEucl=0.882; NSW=0.875; rcor=173; rNcor=286; rlogoDP=325; rNsEucl=249; rNSW=268; rank_mean=260.200; match_rank= a 0 0 0 0 0 0 0 1 39 39 0 22 39 0 1 3 c 0 0 0 0 0 0 0 38 0 0 0 7 0 0 0 4 g 0 0 0 0 0 0 0 0 0 0 0 8 0 0 6 32 t 0 0 0 0 0 0 0 0 0 0 39 2 0 39 32 0

ATHB15_MA1026.2_JASPAR_shift2 (ATHB15:MA1026.2:JASPAR) 0.721 0.481 9.015 0.882 0.860 352 310 49 252 351 262.800
; 1_m6_assembly_6 versus ATHB15_MA1026.2_JASPAR (ATHB15:MA1026.2:JASPAR); m=102/128; ncol2=15; w=-4; offset=-4; strand=D; shift=2; score= 262.8; --rawwrTAATGATkA ; cor=0.721; Ncor=0.481; logoDP=9.015; NsEucl=0.882; NSW=0.860; rcor=352; rNcor=310; rlogoDP=49; rNsEucl=252; rNSW=351; rank_mean=262.800; match_rank= a 0 0 265 363 268 212 199 13 518 590 0 27 590 0 10 494 c 0 0 43 31 35 63 46 97 1 0 0 82 0 0 0 1 g 0 0 158 84 60 131 329 0 68 0 0 462 0 0 218 87 t 0 0 124 112 227 184 16 480 3 0 590 19 0 590 362 8

ATHB6.DAP_M0430_AthalianaCistrome_rc_shift5 (ATHB6.DAP:M0430:AthalianaCistrome_rc) 0.715 0.650 0.299 0.887 0.873 378 93 366 200 295 266.400
; 1_m6_assembly_6 versus ATHB6.DAP_M0430_AthalianaCistrome_rc (ATHB6.DAP:M0430:AthalianaCistrome_rc); m=103/128; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score= 266.4; -----rwdaATkATTr ; cor=0.715; Ncor=0.650; logoDP=0.299; NsEucl=0.887; NSW=0.873; rcor=378; rNcor=93; rlogoDP=366; rNsEucl=200; rNSW=295; rank_mean=266.400; match_rank= a 0 0 0 0 0 191 193 172 305 585 0 45 600 0 0 241 c 0 0 0 0 0 121 87 110 149 6 0 65 0 0 0 0 g 0 0 0 0 0 151 80 152 34 0 0 309 0 0 19 347 t 0 0 0 0 0 137 240 166 112 9 600 181 0 600 581 12

ATHB-5_MA0110.4_JASPAR_shift7 (ATHB-5:MA0110.4:JASPAR) 0.738 0.591 7.543 0.864 0.852 304 177 106 372 383 268.400
; 1_m6_assembly_6 versus ATHB-5_MA0110.4_JASPAR (ATHB-5:MA0110.4:JASPAR); m=104/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 268.4; -------CAATCATT- ; cor=0.738; Ncor=0.591; logoDP=7.543; NsEucl=0.864; NSW=0.852; rcor=304; rNcor=177; rlogoDP=106; rNsEucl=372; rNSW=383; rank_mean=268.400; match_rank= a 0 0 0 0 0 0 0 1051 9632 9563 230 841 9809 648 633 0 c 0 0 0 0 0 0 0 7517 197 154 98 8049 48 178 312 0 g 0 0 0 0 0 0 0 386 74 50 59 254 51 175 394 0 t 0 0 0 0 0 0 0 1168 219 355 9735 978 214 9121 8783 0

AHL12_MA0932.1_JASPAR_shift7 (AHL12:MA0932.1:JASPAR) 0.737 0.590 4.020 0.872 0.869 310 180 235 321 307 270.600
; 1_m6_assembly_6 versus AHL12_MA0932.1_JASPAR (AHL12:MA0932.1:JASPAR); m=105/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 270.6; -------AAwwwwTT- ; cor=0.737; Ncor=0.590; logoDP=4.020; NsEucl=0.872; NSW=0.869; rcor=310; rNcor=180; rlogoDP=235; rNsEucl=321; rNSW=307; rank_mean=270.600; match_rank= a 0 0 0 0 0 0 0 772 843 484 332 660 497 98 64 0 c 0 0 0 0 0 0 0 18 35 14 6 3 5 24 146 0 g 0 0 0 0 0 0 0 146 24 5 3 6 14 35 18 0 t 0 0 0 0 0 0 0 64 98 497 660 332 484 843 772 0

ATHB-5_MA0110.1_JASPAR_shift6 (ATHB-5:MA0110.1:JASPAR) 0.703 0.633 8.695 0.868 0.844 435 116 64 351 404 274.000
; 1_m6_assembly_6 versus ATHB-5_MA0110.1_JASPAR (ATHB-5:MA0110.1:JASPAR); m=106/128; ncol2=9; w=0; offset=0; strand=D; shift=6; score= 274; ------cCAATkATT- ; cor=0.703; Ncor=0.633; logoDP=8.695; NsEucl=0.868; NSW=0.844; rcor=435; rNcor=116; rlogoDP=64; rNsEucl=351; rNSW=404; rank_mean=274.000; match_rank= a 0 0 0 0 0 0 3 1 30 37 0 2 37 0 0 0 c 0 0 0 0 0 0 19 29 6 0 0 5 0 0 0 0 g 0 0 0 0 0 0 9 4 0 0 0 10 0 0 0 0 t 0 0 0 0 0 0 6 3 1 0 37 20 0 37 37 0

ATHB25_MA1329.1_JASPAR_shift6 (ATHB25:MA1329.1:JASPAR) 0.707 0.472 7.806 0.884 0.866 416 329 86 224 323 275.600
; 1_m6_assembly_6 versus ATHB25_MA1329.1_JASPAR (ATHB25:MA1329.1:JASPAR); m=107/128; ncol2=15; w=0; offset=0; strand=D; shift=6; score= 275.6; ------tmayTAATyA ; cor=0.707; Ncor=0.472; logoDP=7.806; NsEucl=0.884; NSW=0.866; rcor=416; rNcor=329; rlogoDP=86; rNsEucl=224; rNSW=323; rank_mean=275.600; match_rank= a 0 0 0 0 0 0 148 213 320 9 0 600 600 0 0 581 c 0 0 0 0 0 0 109 183 115 259 0 0 0 6 166 8 g 0 0 0 0 0 0 43 73 132 8 0 0 0 3 28 9 t 0 0 0 0 0 0 300 131 33 324 600 0 0 591 406 2

PHV.DAP_M0416_AthalianaCistrome_rc_shift2 (PHV.DAP:M0416:AthalianaCistrome_rc) 0.736 0.491 4.279 0.885 0.867 315 301 222 223 319 276.000
; 1_m6_assembly_6 versus PHV.DAP_M0416_AthalianaCistrome_rc (PHV.DAP:M0416:AthalianaCistrome_rc); m=108/128; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score= 276; --rawwrTAATGATkA ; cor=0.736; Ncor=0.491; logoDP=4.279; NsEucl=0.885; NSW=0.867; rcor=315; rNcor=301; rlogoDP=222; rNsEucl=223; rNSW=319; rank_mean=276.000; match_rank= a 0 0 270 374 286 250 214 25 537 598 0 54 598 0 4 511 c 0 0 45 39 44 45 59 76 16 0 0 56 0 0 0 4 g 0 0 153 71 55 130 304 1 45 0 0 455 0 0 195 83 t 0 0 130 114 213 173 21 496 0 0 598 33 0 598 399 0

At1g76110.ampDAP_M0145_AthalianaCistrome_rc_shift3 (At1g76110.ampDAP:M0145:AthalianaCistrome_rc) 0.716 0.477 0.671 0.892 0.882 373 317 338 155 221 280.800
; 1_m6_assembly_6 versus At1g76110.ampDAP_M0145_AthalianaCistrome_rc (At1g76110.ampDAP:M0145:AthalianaCistrome_rc); m=109/128; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score= 280.8; ---aATTwAATtwtwa ; cor=0.716; Ncor=0.477; logoDP=0.671; NsEucl=0.892; NSW=0.882; rcor=373; rNcor=317; rlogoDP=338; rNsEucl=155; rNSW=221; rank_mean=280.800; match_rank= a 0 0 0 192 387 0 0 193 336 374 21 92 178 53 117 260 c 0 0 0 58 0 0 36 22 28 9 23 71 47 52 29 48 g 0 0 0 42 0 0 0 0 23 0 10 92 30 30 17 43 t 0 0 0 95 0 387 351 172 0 4 333 132 132 252 224 36

YAB5_UN0416.2_JASPAR_rc_shift6 (YAB5:UN0416.2:JASPAR_rc) 0.734 0.587 4.221 0.870 0.865 321 187 225 341 331 281.000
; 1_m6_assembly_6 versus YAB5_UN0416.2_JASPAR_rc (YAB5:UN0416.2:JASPAR_rc); m=110/128; ncol2=8; w=0; offset=0; strand=R; shift=6; score= 281; ------wTAATtAT-- ; cor=0.734; Ncor=0.587; logoDP=4.221; NsEucl=0.870; NSW=0.865; rcor=321; rNcor=187; rlogoDP=225; rNsEucl=341; rNSW=331; rank_mean=281.000; match_rank= a 0 0 0 0 0 0 447 0 904 809 0 26 752 78 0 0 c 0 0 0 0 0 0 153 0 0 96 0 227 51 78 0 0 g 0 0 0 0 0 0 52 94 0 0 96 121 51 78 0 0 t 0 0 0 0 0 0 348 905 95 94 903 625 147 765 0 0

KAN2.ampDAP_M0396_AthalianaCistrome_shift4 (KAN2.ampDAP:M0396:AthalianaCistrome) 0.707 0.530 8.128 0.870 0.849 418 255 78 339 389 295.800
; 1_m6_assembly_6 versus KAN2.ampDAP_M0396_AthalianaCistrome (KAN2.ampDAP:M0396:AthalianaCistrome); m=111/128; ncol2=11; w=-2; offset=-2; strand=D; shift=4; score= 295.8; ----arrGAATAWtc- ; cor=0.707; Ncor=0.530; logoDP=8.128; NsEucl=0.870; NSW=0.849; rcor=418; rNcor=255; rlogoDP=78; rNsEucl=339; rNSW=389; rank_mean=295.800; match_rank= a 0 0 0 0 297 311 346 0 556 557 0 542 145 111 102 0 c 0 0 0 0 63 18 2 0 0 0 1 0 0 19 285 0 g 0 0 0 0 98 177 209 557 0 0 0 15 0 68 90 0 t 0 0 0 0 99 51 0 0 1 0 556 0 412 359 80 0

ATHB24_MA1330.1_JASPAR_shift5 (ATHB24:MA1330.1:JASPAR) 0.702 0.468 6.039 0.884 0.866 446 336 151 225 324 296.400
; 1_m6_assembly_6 versus ATHB24_MA1330.1_JASPAR (ATHB24:MA1330.1:JASPAR); m=112/128; ncol2=15; w=-1; offset=-1; strand=D; shift=5; score= 296.4; -----wawhrTRATTA ; cor=0.702; Ncor=0.468; logoDP=6.039; NsEucl=0.884; NSW=0.866; rcor=446; rNcor=336; rlogoDP=151; rNsEucl=225; rNSW=324; rank_mean=296.400; match_rank= a 0 0 0 0 0 368 357 260 179 217 12 411 585 0 0 598 c 0 0 0 0 0 45 63 76 153 35 13 14 0 0 0 0 g 0 0 0 0 0 29 54 88 76 242 2 175 13 0 0 2 t 0 0 0 0 0 158 126 176 192 106 573 0 2 600 600 0

REV_MA2344.1_JASPAR_rc_shift4 (REV:MA2344.1:JASPAR_rc) 0.714 0.510 3.808 0.882 0.860 386 277 253 254 356 305.200
; 1_m6_assembly_6 versus REV_MA2344.1_JASPAR_rc (REV:MA2344.1:JASPAR_rc); m=113/128; ncol2=14; w=-2; offset=-2; strand=R; shift=4; score= 305.2; ----tAATAATGATkA ; cor=0.714; Ncor=0.510; logoDP=3.808; NsEucl=0.882; NSW=0.860; rcor=386; rNcor=277; rlogoDP=253; rNsEucl=254; rNSW=356; rank_mean=305.200; match_rank= a 0 0 0 0 63 299 313 12 308 369 4 26 373 16 28 296 c 0 0 0 0 26 22 18 8 17 0 3 17 4 9 4 21 g 0 0 0 0 40 27 36 5 39 11 5 318 5 11 194 27 t 0 0 0 0 256 37 18 360 21 5 373 24 3 349 159 41

CRC_UN0396.1_JASPAR_shift7 (CRC:UN0396.1:JASPAR) 0.708 0.567 7.827 0.857 0.836 413 210 83 408 427 308.200
; 1_m6_assembly_6 versus CRC_UN0396.1_JASPAR (CRC:UN0396.1:JASPAR); m=114/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 308.2; -------TwATCATw- ; cor=0.708; Ncor=0.567; logoDP=7.827; NsEucl=0.857; NSW=0.836; rcor=413; rNcor=210; rlogoDP=83; rNsEucl=408; rNSW=427; rank_mean=308.200; match_rank= a 0 0 0 0 0 0 0 35 587 995 28.333 0 1000 0 598 0 c 0 0 0 0 0 0 0 143 48.333 0 0 988 0 0 73.333 0 g 0 0 0 0 0 0 0 80 1.667 0 0 11.667 0 5 60 0 t 0 0 0 0 0 0 0 742 363 5 972 0 0 995 268 0

ZAT6_MA2052.2_JASPAR_rc_shift7 (ZAT6:MA2052.2:JASPAR_rc) 0.720 0.576 4.388 0.859 0.841 355 199 214 396 416 316.000
; 1_m6_assembly_6 versus ZAT6_MA2052.2_JASPAR_rc (ZAT6:MA2052.2:JASPAR_rc); m=115/128; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 316; -------CAATCATT- ; cor=0.720; Ncor=0.576; logoDP=4.388; NsEucl=0.859; NSW=0.841; rcor=355; rNcor=199; rlogoDP=214; rNsEucl=396; rNSW=416; rank_mean=316.000; match_rank= a 0 0 0 0 0 0 0 1077 8080 8084 182 317 8247 575 647 0 c 0 0 0 0 0 0 0 5912 213 173 82 7885 45 164 310 0 g 0 0 0 0 0 0 0 410 77 37 56 40 82 170 393 0 t 0 0 0 0 0 0 0 1185 214 290 8264 342 210 7675 7234 0

ZHD10_MA1807.1_JASPAR_rc_shift7 (ZHD10:MA1807.1:JASPAR_rc) 0.710 0.533 4.003 0.871 0.851 400 248 240 332 385 321.000
; 1_m6_assembly_6 versus ZHD10_MA1807.1_JASPAR_rc (ZHD10:MA1807.1:JASPAR_rc); m=116/128; ncol2=11; w=0; offset=1; strand=R; shift=7; score= 321; -------aayTAATTA ; cor=0.710; Ncor=0.533; logoDP=4.003; NsEucl=0.871; NSW=0.851; rcor=400; rNcor=248; rlogoDP=240; rNsEucl=332; rNSW=385; rank_mean=321.000; match_rank= a 0 0 0 0 0 0 0 371 598 0 0 1000 1000 0 0 972 c 0 0 0 0 0 0 0 245 138 372.34 0 0 0 0 172 0 g 0 0 0 0 0 0 0 160 172 0 0 0 0 0 0 28.369 t 0 0 0 0 0 0 0 225 92.199 627.66 1000 0 0 1000 828 0

ATHB23.ampDAP_M0855_AthalianaCistrome_rc_shift7 (ATHB23.ampDAP:M0855:AthalianaCistrome_rc) 0.710 0.533 4.003 0.871 0.851 401 249 239 333 386 321.600
; 1_m6_assembly_6 versus ATHB23.ampDAP_M0855_AthalianaCistrome_rc (ATHB23.ampDAP:M0855:AthalianaCistrome_rc); m=117/128; ncol2=11; w=0; offset=1; strand=R; shift=7; score= 321.6; -------aayTAATTA ; cor=0.710; Ncor=0.533; logoDP=4.003; NsEucl=0.871; NSW=0.851; rcor=401; rNcor=249; rlogoDP=239; rNsEucl=333; rNSW=386; rank_mean=321.600; match_rank= a 0 0 0 0 0 0 0 209 337 0 0 564 564 0 0 548 c 0 0 0 0 0 0 0 138 78 210 0 0 0 0 97 0 g 0 0 0 0 0 0 0 90 97 0 0 0 0 0 0 16 t 0 0 0 0 0 0 0 127 52 354 564 0 0 564 467 0

ZIM2_B73_1_m1_EEAD0558_EEADannot_rc_shift3 (ZIM2_B73_1_m1:EEAD0558:EEADannot_rc) 0.739 0.493 2.043 0.874 0.842 302 296 296 307 411 322.400
; 1_m6_assembly_6 versus ZIM2_B73_1_m1_EEAD0558_EEADannot_rc (ZIM2_B73_1_m1:EEAD0558:EEADannot_rc); m=118/128; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score= 322.4; ---GTCCARATAATCT ; cor=0.739; Ncor=0.493; logoDP=2.043; NsEucl=0.874; NSW=0.842; rcor=302; rNcor=296; rlogoDP=296; rNsEucl=307; rNSW=411; rank_mean=322.400; match_rank= a 0 0 0 11 0 0 0 100 75 98 0 100 99 0 1 1 c 0 0 0 0 1 99 98 0 0 0 1 0 0 1 98 5 g 0 0 0 68 0 0 0 0 25 2 0 0 0 0 0 0 t 0 0 0 21 99 1 2 0 0 0 99 0 1 99 1 94

ATHB25.ampDAP_M0853_AthalianaCistrome_rc_shift7 (ATHB25.ampDAP:M0853:AthalianaCistrome_rc) 0.704 0.528 3.868 0.873 0.854 433 256 246 318 372 325.000
; 1_m6_assembly_6 versus ATHB25.ampDAP_M0853_AthalianaCistrome_rc (ATHB25.ampDAP:M0853:AthalianaCistrome_rc); m=119/128; ncol2=11; w=0; offset=1; strand=R; shift=7; score= 325; -------yryTAATyA ; cor=0.704; Ncor=0.528; logoDP=3.868; NsEucl=0.873; NSW=0.854; rcor=433; rNcor=256; rlogoDP=246; rNsEucl=318; rNSW=372; rank_mean=325.000; match_rank= a 0 0 0 0 0 0 0 131 258 31 0 597 597 0 0 573 c 0 0 0 0 0 0 0 203 149 237 0 0 0 1 174 0 g 0 0 0 0 0 0 0 95 178 9 0 0 0 3 42 24 t 0 0 0 0 0 0 0 168 12 320 597 0 0 593 381 0

ZHD5_MA1326.2_JASPAR_rc_shift9 (ZHD5:MA1326.2:JASPAR_rc) 0.727 0.463 5.863 0.852 0.847 338 341 159 421 397 331.200
; 1_m6_assembly_6 versus ZHD5_MA1326.2_JASPAR_rc (ZHD5:MA1326.2:JASPAR_rc); m=120/128; ncol2=8; w=0; offset=3; strand=R; shift=9; score= 331.2; ---------yTAATyA ; cor=0.727; Ncor=0.463; logoDP=5.863; NsEucl=0.852; NSW=0.847; rcor=338; rNcor=341; rlogoDP=159; rNsEucl=421; rNSW=397; rank_mean=331.200; match_rank= a 0 0 0 0 0 0 0 0 0 9 1 600 600 0 0 576 c 0 0 0 0 0 0 0 0 0 237 0 0 0 6 194 2 g 0 0 0 0 0 0 0 0 0 19 0 0 0 3 90 22 t 0 0 0 0 0 0 0 0 0 335 599 0 0 591 316 0

LOC_Os02g57820_M0137_1.02_CISBP_shift7 (LOC_Os02g57820:M0137_1.02:CISBP) 0.718 0.574 1.728 0.861 0.844 363 201 305 391 402 332.400
; 1_m6_assembly_6 versus LOC_Os02g57820_M0137_1.02_CISBP (LOC_Os02g57820:M0137_1.02:CISBP); m=121/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 332.4; -------awwwAwww- ; cor=0.718; Ncor=0.574; logoDP=1.728; NsEucl=0.861; NSW=0.844; rcor=363; rNcor=201; rlogoDP=305; rNsEucl=391; rNSW=402; rank_mean=332.400; match_rank= a 0 0 0 0 0 0 0 41 38 41 44 81 51 34 31 0 c 0 0 0 0 0 0 0 18 15 4 12 0 0 8 19 0 g 0 0 0 0 0 0 0 21 19 19 5 8 7 6 15 0 t 0 0 0 0 0 0 0 20 28 36 39 11 42 52 35 0

CRC.DAP_M0300_AthalianaCistrome_rc_shift7 (CRC.DAP:M0300:AthalianaCistrome_rc) 0.708 0.567 4.047 0.857 0.836 414 211 233 409 428 339.000
; 1_m6_assembly_6 versus CRC.DAP_M0300_AthalianaCistrome_rc (CRC.DAP:M0300:AthalianaCistrome_rc); m=122/128; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 339; -------TwATCATw- ; cor=0.708; Ncor=0.567; logoDP=4.047; NsEucl=0.857; NSW=0.836; rcor=414; rNcor=211; rlogoDP=233; rNsEucl=409; rNSW=428; rank_mean=339.000; match_rank= a 0 0 0 0 0 0 0 21 352 597 17 0 600 0 359 0 c 0 0 0 0 0 0 0 86 29 0 0 593 0 0 44 0 g 0 0 0 0 0 0 0 48 1 0 0 7 0 3 36 0 t 0 0 0 0 0 0 0 445 218 3 583 0 0 597 161 0

Os02g0706600_M1116_1.02_CISBP_shift8 (Os02g0706600:M1116_1.02:CISBP) 0.736 0.491 1.585 0.862 0.847 312 298 310 384 396 340.000
; 1_m6_assembly_6 versus Os02g0706600_M1116_1.02_CISBP (Os02g0706600:M1116_1.02:CISBP); m=123/128; ncol2=10; w=0; offset=2; strand=D; shift=8; score= 340; --------vyTAAtym ; cor=0.736; Ncor=0.491; logoDP=1.585; NsEucl=0.862; NSW=0.847; rcor=312; rNcor=298; rlogoDP=310; rNsEucl=384; rNSW=396; rank_mean=340.000; match_rank= a 0 0 0 0 0 0 0 0 25 21 19 69 75 15 18 31 c 0 0 0 0 0 0 0 0 28 32 11 7 12 20 38 25 g 0 0 0 0 0 0 0 0 26 19 2 14 4 15 19 22 t 0 0 0 0 0 0 0 0 21 28 68 10 9 50 25 22

ATHB7_MA0954.2_JASPAR_rc_shift4 (ATHB7:MA0954.2:JASPAR_rc) 0.709 0.545 0.104 0.879 0.853 410 235 418 266 379 341.600
; 1_m6_assembly_6 versus ATHB7_MA0954.2_JASPAR_rc (ATHB7:MA0954.2:JASPAR_rc); m=124/128; ncol2=13; w=-2; offset=-2; strand=R; shift=4; score= 341.6; ----awyCAATCATTg ; cor=0.709; Ncor=0.545; logoDP=0.104; NsEucl=0.879; NSW=0.853; rcor=410; rNcor=235; rlogoDP=418; rNsEucl=266; rNSW=379; rank_mean=341.600; match_rank= a 0 0 0 0 288 271 49 9 598 600 0 132 598 37 54 66 c 0 0 0 0 93 98 181 551 2 0 0 464 1 0 11 92 g 0 0 0 0 91 57 46 3 0 0 0 2 1 3 62 389 t 0 0 0 0 128 174 324 37 0 0 600 2 0 560 473 53

GLK21_MWP1_B73_1_m1_EEAD0371_EEADannot_rc_shift0 (GLK21_MWP1_B73_1_m1:EEAD0371:EEADannot_rc) 0.720 0.405 0.728 0.877 0.864 356 447 336 279 335 350.600
; 1_m6_assembly_6 versus GLK21_MWP1_B73_1_m1_EEAD0371_EEADannot_rc (GLK21_MWP1_B73_1_m1:EEAD0371:EEADannot_rc); m=125/128; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score= 350.6; raahaaRGAATAwtm- ; cor=0.720; Ncor=0.405; logoDP=0.728; NsEucl=0.877; NSW=0.864; rcor=356; rNcor=447; rlogoDP=336; rNsEucl=279; rNSW=335; rank_mean=350.600; match_rank= a 30 47 65 29 66 54 68 0 93 100 0 76 37 21 37 0 c 9 14 9 37 4 2 0 0 2 0 0 0 0 1 41 0 g 45 23 14 8 15 20 31 99 1 0 0 22 2 19 11 0 t 16 16 12 26 15 24 1 1 4 0 100 2 61 59 11 0

HAT3_UN0862.1_JASPAR_rc_shift7 (HAT3:UN0862.1:JASPAR_rc) 0.738 0.443 2.562 0.844 0.854 308 375 288 433 371 355.000
; 1_m6_assembly_6 versus HAT3_UN0862.1_JASPAR_rc (HAT3:UN0862.1:JASPAR_rc); m=126/128; ncol2=6; w=0; offset=1; strand=R; shift=7; score= 355; -------yAATCA--- ; cor=0.738; Ncor=0.443; logoDP=2.562; NsEucl=0.844; NSW=0.854; rcor=308; rNcor=375; rlogoDP=288; rNsEucl=433; rNSW=371; rank_mean=355.000; match_rank= a 0 0 0 0 0 0 0 58 846 854 46 108 815 0 0 0 c 0 0 0 0 0 0 0 542 68 62 61 757 34 0 0 0 g 0 0 0 0 0 0 0 27 12 28 0 56 58 0 0 0 t 0 0 0 0 0 0 0 371 72 54 891 77 91 0 0 0

ZHD10_MA1807.2_JASPAR_rc_shift8 (ZHD10:MA1807.2:JASPAR_rc) 0.710 0.568 1.095 0.856 0.833 402 208 328 415 434 357.400
; 1_m6_assembly_6 versus ZHD10_MA1807.2_JASPAR_rc (ZHD10:MA1807.2:JASPAR_rc); m=127/128; ncol2=8; w=0; offset=2; strand=R; shift=8; score= 357.4; --------ayTAATTA ; cor=0.710; Ncor=0.568; logoDP=1.095; NsEucl=0.856; NSW=0.833; rcor=402; rNcor=208; rlogoDP=328; rNsEucl=415; rNSW=434; rank_mean=357.400; match_rank= a 0 0 0 0 0 0 0 0 598 0 0 1000 1000 0 0 972 c 0 0 0 0 0 0 0 0 138 372 0 0 0 0 172 0 g 0 0 0 0 0 0 0 0 172 0 0 0 0 0 0 28 t 0 0 0 0 0 0 0 0 92 628 1000 0 0 1000 828 0

KAN2_MA1383.2_JASPAR_rc_shift4 (KAN2:MA1383.2:JASPAR_rc) 0.717 0.478 0.379 0.857 0.836 368 316 356 411 430 376.200
; 1_m6_assembly_6 versus KAN2_MA1383.2_JASPAR_rc (KAN2:MA1383.2:JASPAR_rc); m=128/128; ncol2=10; w=-2; offset=-2; strand=R; shift=4; score= 376.2; ----arAGAATATt-- ; cor=0.717; Ncor=0.478; logoDP=0.379; NsEucl=0.857; NSW=0.836; rcor=368; rNcor=316; rlogoDP=356; rNsEucl=411; rNSW=430; rank_mean=376.200; match_rank= a 0 0 0 0 116 123 159 1 212 214 0 214 44 51 0 0 c 0 0 0 0 12 12 0 0 0 0 0 0 0 8 0 0 g 0 0 0 0 40 55 48 210 0 0 0 0 0 18 0 0 t 0 0 0 0 46 24 7 3 2 0 214 0 170 137 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	match_rank	Aligned matrices
1_m6_assembly_6_shift6 (assembly_6)													; 1_m6_assembly_6 (assembly_6); m=0 (reference); ncol1=10; shift=6; ncol=16; ------wwAATAATww ; Alignment reference a 0 0 0 0 0 0 381 319 869 869 0 869 869 0 334 332 c 0 0 0 0 0 0 127 150 0 0 0 0 0 0 114 129 g 0 0 0 0 0 0 129 108 0 0 0 0 0 0 131 105 t 0 0 0 0 0 0 232 292 0 0 869 0 0 869 290 303
ATHB13_MA1212.1_JASPAR_shift6 (ATHB13:MA1212.1:JASPAR)	0.927	0.843	10.536	0.941	0.965	8	3	10	4	5	6.000	1	; 1_m6_assembly_6 versus ATHB13_MA1212.1_JASPAR (ATHB13:MA1212.1:JASPAR); m=1/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 6; ------tyAATAATTr ; cor=0.927; Ncor=0.843; logoDP=10.536; NsEucl=0.941; NSW=0.965; rcor=8; rNcor=3; rlogoDP=10; rNsEucl=4; rNSW=5; rank_mean=6.000; match_rank=1 a 0 0 0 0 0 0 137 90 600 599 0 484 600 0 63 201 c 0 0 0 0 0 0 147 295 0 0 0 109 0 2 2 70 g 0 0 0 0 0 0 70 0 0 0 0 1 0 0 48 187 t 0 0 0 0 0 0 246 215 0 1 600 6 0 598 487 142
HAT5.DAP_M0442_AthalianaCistrome_shift6 (HAT5.DAP:M0442:AthalianaCistrome)	0.920	0.836	11.246	0.936	0.960	13	6	1	8	12	8.000	2	; 1_m6_assembly_6 versus HAT5.DAP_M0442_AthalianaCistrome (HAT5.DAP:M0442:AthalianaCistrome); m=2/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 8; ------wyAATAATTr ; cor=0.920; Ncor=0.836; logoDP=11.246; NsEucl=0.936; NSW=0.960; rcor=13; rNcor=6; rlogoDP=1; rNsEucl=8; rNSW=12; rank_mean=8.000; match_rank=2 a 0 0 0 0 0 0 195 121 596 596 0 579 596 1 27 154 c 0 0 0 0 0 0 131 316 0 0 0 0 0 0 0 68 g 0 0 0 0 0 0 75 0 0 0 3 9 0 0 45 279 t 0 0 0 0 0 0 195 159 0 0 593 8 0 595 524 95
HB22_B73_1_m1_EEAD0403_EEADannot_shift6 (HB22_B73_1_m1:EEAD0403:EEADannot)	0.923	0.839	10.094	0.940	0.964	9	4	15	6	7	8.200	3	; 1_m6_assembly_6 versus HB22_B73_1_m1_EEAD0403_EEADannot (HB22_B73_1_m1:EEAD0403:EEADannot); m=3/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 8.2; ------hyAATAATka ; cor=0.923; Ncor=0.839; logoDP=10.094; NsEucl=0.940; NSW=0.964; rcor=9; rNcor=4; rlogoDP=15; rNsEucl=6; rNSW=7; rank_mean=8.200; match_rank=3 a 0 0 0 0 0 0 26 13 100 99 0 70 100 0 7 40 c 0 0 0 0 0 0 28 56 0 0 0 5 0 0 0 21 g 0 0 0 0 0 0 15 2 0 1 0 23 0 0 27 24 t 0 0 0 0 0 0 31 29 0 0 100 2 0 100 66 15
ATHB-13_MA1212.2_JASPAR_shift7 (ATHB-13:MA1212.2:JASPAR)	0.940	0.752	10.532	0.934	0.965	5	29	11	9	6	12.000	4	; 1_m6_assembly_6 versus ATHB-13_MA1212.2_JASPAR (ATHB-13:MA1212.2:JASPAR); m=4/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 12; -------yAATAATT- ; cor=0.940; Ncor=0.752; logoDP=10.532; NsEucl=0.934; NSW=0.965; rcor=5; rNcor=29; rlogoDP=11; rNsEucl=9; rNSW=6; rank_mean=12.000; match_rank=4 a 0 0 0 0 0 0 0 90 600 599 0 484 600 0 63 0 c 0 0 0 0 0 0 0 295 0 0 0 109 0 2 2 0 g 0 0 0 0 0 0 0 0 0 0 0 1 0 0 48 0 t 0 0 0 0 0 0 0 215 0 1 600 6 0 598 487 0
HB102_B73_1_m1_EEAD0393_EEADannot_shift7 (HB102_B73_1_m1:EEAD0393:EEADannot)	0.938	0.767	9.898	0.941	0.969	6	24	23	5	3	12.200	5	; 1_m6_assembly_6 versus HB102_B73_1_m1_EEAD0393_EEADannot (HB102_B73_1_m1:EEAD0393:EEADannot); m=5/128; ncol2=10; w=0; offset=1; strand=D; shift=7; score= 12.2; -------yAATAATka ; cor=0.938; Ncor=0.767; logoDP=9.898; NsEucl=0.941; NSW=0.969; rcor=6; rNcor=24; rlogoDP=23; rNsEucl=5; rNSW=3; rank_mean=12.200; match_rank=5 a 0 0 0 0 0 0 0 14 99 99 0 68 100 0 8 34 c 0 0 0 0 0 0 0 52 0 0 0 8 0 0 0 23 g 0 0 0 0 0 0 0 4 1 1 0 21 0 0 37 19 t 0 0 0 0 0 0 0 30 0 0 100 3 0 100 55 24
LOC_Os10g26500.1_HOMEOBOX_1_AT1G69780_EEAD0639_EEADannot_shift6 (LOC_Os10g26500.1_HOMEOBOX_1_AT1G69780:EEAD0639:EEADannot)	0.902	0.820	10.573	0.931	0.952	18	8	9	12	16	12.600	6	; 1_m6_assembly_6 versus LOC_Os10g26500.1_HOMEOBOX_1_AT1G69780_EEAD0639_EEADannot (LOC_Os10g26500.1_HOMEOBOX_1_AT1G69780:EEAD0639:EEADannot); m=6/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 12.6; ------tyAATAATTr ; cor=0.902; Ncor=0.820; logoDP=10.573; NsEucl=0.931; NSW=0.952; rcor=18; rNcor=8; rlogoDP=9; rNsEucl=12; rNSW=16; rank_mean=12.600; match_rank=6 a 0 0 0 0 0 0 18 18 100 99 0 81 100 0 7 25 c 0 0 0 0 0 0 16 46 0 0 0 19 0 0 0 2 g 0 0 0 0 0 0 8 2 0 0 0 0 0 0 9 52 t 0 0 0 0 0 0 58 34 0 1 100 0 0 100 84 21
ATHB20_MA1209.1_JASPAR_shift6 (ATHB20:MA1209.1:JASPAR)	0.898	0.816	11.185	0.927	0.947	20	10	4	15	23	14.400	7	; 1_m6_assembly_6 versus ATHB20_MA1209.1_JASPAR (ATHB20:MA1209.1:JASPAR); m=7/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 14.4; ------hyAATAATTr ; cor=0.898; Ncor=0.816; logoDP=11.185; NsEucl=0.927; NSW=0.947; rcor=20; rNcor=10; rlogoDP=4; rNsEucl=15; rNSW=23; rank_mean=14.400; match_rank=7 a 0 0 0 0 0 0 58 30 230 230 0 218 230 0 0 71 c 0 0 0 0 0 0 59 115 0 0 0 0 0 0 1 19 g 0 0 0 0 0 0 23 2 0 0 0 9 0 0 0 110 t 0 0 0 0 0 0 90 83 0 0 230 3 0 230 229 30
Zm00001d005692_MA1824.1_JASPAR_shift5 (Zm00001d005692:MA1824.1:JASPAR)	0.951	0.792	8.944	0.952	0.977	2	15	53	1	2	14.600	8	; 1_m6_assembly_6 versus Zm00001d005692_MA1824.1_JASPAR (Zm00001d005692:MA1824.1:JASPAR); m=8/128; ncol2=12; w=-1; offset=-1; strand=D; shift=5; score= 14.6; -----wmcAATAATtr ; cor=0.951; Ncor=0.792; logoDP=8.944; NsEucl=0.952; NSW=0.977; rcor=2; rNcor=15; rlogoDP=53; rNsEucl=1; rNSW=2; rank_mean=14.600; match_rank=8 a 0 0 0 0 0 1156 1009 440 3130 3145 31 2697 3173 72 706 912 c 0 0 0 0 0 633 821 1879 34 30 47 148 18 19 240 699 g 0 0 0 0 0 652 681 254 27 24 32 148 28 26 520 925 t 0 0 0 0 0 815 745 683 65 57 3146 263 37 3139 1790 720
ATHB13.ampDAP_M0439_AthalianaCistrome_shift6 (ATHB13.ampDAP:M0439:AthalianaCistrome)	0.895	0.814	10.936	0.927	0.947	24	11	8	14	22	15.800	9	; 1_m6_assembly_6 versus ATHB13.ampDAP_M0439_AthalianaCistrome (ATHB13.ampDAP:M0439:AthalianaCistrome); m=9/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 15.8; ------tyAATAATTr ; cor=0.895; Ncor=0.814; logoDP=10.936; NsEucl=0.927; NSW=0.947; rcor=24; rNcor=11; rlogoDP=8; rNsEucl=14; rNSW=22; rank_mean=15.800; match_rank=9 a 0 0 0 0 0 0 123 68 571 571 0 514 571 0 18 143 c 0 0 0 0 0 0 142 312 0 0 0 7 0 0 0 56 g 0 0 0 0 0 0 82 6 0 0 0 50 0 0 43 322 t 0 0 0 0 0 0 224 185 0 0 571 0 0 571 510 50
Zm00001d005692_MA1824.2_JASPAR_shift7 (Zm00001d005692:MA1824.2:JASPAR)	0.960	0.768	8.944	0.947	0.977	1	23	54	2	1	16.200	10	; 1_m6_assembly_6 versus Zm00001d005692_MA1824.2_JASPAR (Zm00001d005692:MA1824.2:JASPAR); m=10/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 16.2; -------cAATAATt- ; cor=0.960; Ncor=0.768; logoDP=8.944; NsEucl=0.947; NSW=0.977; rcor=1; rNcor=23; rlogoDP=54; rNsEucl=2; rNSW=1; rank_mean=16.200; match_rank=10 a 0 0 0 0 0 0 0 440 3130 3145 31 2697 3173 72 706 0 c 0 0 0 0 0 0 0 1879 34 30 47 148 18 19 240 0 g 0 0 0 0 0 0 0 254 27 24 32 148 28 26 520 0 t 0 0 0 0 0 0 0 683 65 57 3146 263 37 3139 1790 0
Solyc05g007180.3.1_HOMEOBOX_1_AT1G69780_EEAD0650_EEADannot_rc_shift6 (Solyc05g007180.3.1_HOMEOBOX_1_AT1G69780:EEAD0650:EEADannot_rc)	0.934	0.849	8.595	0.943	0.968	7	2	67	3	4	16.600	11	; 1_m6_assembly_6 versus Solyc05g007180.3.1_HOMEOBOX_1_AT1G69780_EEAD0650_EEADannot_rc (Solyc05g007180.3.1_HOMEOBOX_1_AT1G69780:EEAD0650:EEADannot_rc); m=11/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 16.6; ------wyAATAATTr ; cor=0.934; Ncor=0.849; logoDP=8.595; NsEucl=0.943; NSW=0.968; rcor=7; rNcor=2; rlogoDP=67; rNsEucl=3; rNSW=4; rank_mean=16.600; match_rank=11 a 0 0 0 0 0 0 26 22 100 100 0 90 100 0 13 32 c 0 0 0 0 0 0 13 38 0 0 0 10 0 0 0 4 g 0 0 0 0 0 0 7 1 0 0 0 0 0 0 7 43 t 0 0 0 0 0 0 54 39 0 0 100 0 0 100 80 21
ATHB-20_MA1209.2_JASPAR_shift7 (ATHB-20:MA1209.2:JASPAR)	0.921	0.737	11.177	0.921	0.950	11	39	5	23	17	19.000	12	; 1_m6_assembly_6 versus ATHB-20_MA1209.2_JASPAR (ATHB-20:MA1209.2:JASPAR); m=12/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 19; -------yAATAATT- ; cor=0.921; Ncor=0.737; logoDP=11.177; NsEucl=0.921; NSW=0.950; rcor=11; rNcor=39; rlogoDP=5; rNsEucl=23; rNSW=17; rank_mean=19.000; match_rank=12 a 0 0 0 0 0 0 0 30 230 230 0 218 230 0 0 0 c 0 0 0 0 0 0 0 115 0 0 0 0 0 0 1 0 g 0 0 0 0 0 0 0 2 0 0 0 9 0 0 0 0 t 0 0 0 0 0 0 0 83 0 0 230 3 0 230 229 0
ATHB5.DAP_M0410_AthalianaCistrome_shift6 (ATHB5.DAP:M0410:AthalianaCistrome)	0.883	0.803	10.174	0.926	0.945	39	12	13	17	24	21.000	13	; 1_m6_assembly_6 versus ATHB5.DAP_M0410_AthalianaCistrome (ATHB5.DAP:M0410:AthalianaCistrome); m=13/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 21; ------yyAATmATTr ; cor=0.883; Ncor=0.803; logoDP=10.174; NsEucl=0.926; NSW=0.945; rcor=39; rNcor=12; rlogoDP=13; rNsEucl=17; rNSW=24; rank_mean=21.000; match_rank=13 a 0 0 0 0 0 0 145 37 599 599 0 367 599 0 44 177 c 0 0 0 0 0 0 158 368 0 0 0 218 0 0 6 92 g 0 0 0 0 0 0 88 0 0 0 0 3 0 0 53 221 t 0 0 0 0 0 0 208 194 0 0 599 11 0 599 496 109
ATHB53_MA1215.1_JASPAR_shift6 (ATHB53:MA1215.1:JASPAR)	0.879	0.799	11.121	0.921	0.937	42	14	6	22	37	24.200	14	; 1_m6_assembly_6 versus ATHB53_MA1215.1_JASPAR (ATHB53:MA1215.1:JASPAR); m=14/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 24.2; ------mcAATAATTg ; cor=0.879; Ncor=0.799; logoDP=11.121; NsEucl=0.921; NSW=0.937; rcor=42; rNcor=14; rlogoDP=6; rNsEucl=22; rNSW=37; rank_mean=24.200; match_rank=14 a 0 0 0 0 0 0 163 108 599 599 0 563 599 0 34 130 c 0 0 0 0 0 0 246 405 0 0 0 0 0 0 0 29 g 0 0 0 0 0 0 66 0 0 0 0 14 0 0 34 380 t 0 0 0 0 0 0 124 86 0 0 599 22 0 599 531 60
ATHB-53_MA1215.2_JASPAR_shift7 (ATHB-53:MA1215.2:JASPAR)	0.888	0.799	11.118	0.916	0.936	32	13	7	33	40	25.000	15	; 1_m6_assembly_6 versus ATHB-53_MA1215.2_JASPAR (ATHB-53:MA1215.2:JASPAR); m=15/128; ncol2=9; w=0; offset=1; strand=D; shift=7; score= 25; -------cAATAATTg ; cor=0.888; Ncor=0.799; logoDP=11.118; NsEucl=0.916; NSW=0.936; rcor=32; rNcor=13; rlogoDP=7; rNsEucl=33; rNSW=40; rank_mean=25.000; match_rank=15 a 0 0 0 0 0 0 0 108 599 599 0 563 599 0 34 130 c 0 0 0 0 0 0 0 405 0 0 0 0 0 0 0 29 g 0 0 0 0 0 0 0 0 0 0 0 14 0 0 34 380 t 0 0 0 0 0 0 0 86 0 0 599 22 0 599 531 60
ATHB-16_MA0951.1_JASPAR_shift7 (ATHB-16:MA0951.1:JASPAR)	0.895	0.716	9.971	0.913	0.939	25	50	20	40	34	33.800	17	; 1_m6_assembly_6 versus ATHB-16_MA0951.1_JASPAR (ATHB-16:MA0951.1:JASPAR); m=16/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 33.8; -------TAATmATT- ; cor=0.895; Ncor=0.716; logoDP=9.971; NsEucl=0.913; NSW=0.939; rcor=25; rNcor=50; rlogoDP=20; rNsEucl=40; rNSW=34; rank_mean=33.800; match_rank=17 a 0 0 0 0 0 0 0 72 999 999 0 545 999 0 67 0 c 0 0 0 0 0 0 0 214 0 0 0 318 0 0 1 0 g 0 0 0 0 0 0 0 1 0 0 0 137 0 0 67 0 t 0 0 0 0 0 0 0 713 0 0 999 0 0 999 865 0
ATHB16_M0854_1.02_CISBP_shift7 (ATHB16:M0854_1.02:CISBP)	0.895	0.716	9.965	0.913	0.939	26	51	21	39	33	34.000	18	; 1_m6_assembly_6 versus ATHB16_M0854_1.02_CISBP (ATHB16:M0854_1.02:CISBP); m=17/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 34; -------TAATmATT- ; cor=0.895; Ncor=0.716; logoDP=9.965; NsEucl=0.913; NSW=0.939; rcor=26; rNcor=51; rlogoDP=21; rNsEucl=39; rNSW=33; rank_mean=34.000; match_rank=18 a 0 0 0 0 0 0 0 7 100 100 0 54 100 0 7 0 c 0 0 0 0 0 0 0 22 0 0 0 32 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 14 0 0 7 0 t 0 0 0 0 0 0 0 71 0 0 100 0 0 100 86 0
ATHB20.ampDAP_M0431_AthalianaCistrome_rc_shift6 (ATHB20.ampDAP:M0431:AthalianaCistrome_rc)	0.866	0.787	9.109	0.919	0.934	50	18	41	28	42	35.800	19	; 1_m6_assembly_6 versus ATHB20.ampDAP_M0431_AthalianaCistrome_rc (ATHB20.ampDAP:M0431:AthalianaCistrome_rc); m=18/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 35.8; ------yyAATMATTr ; cor=0.866; Ncor=0.787; logoDP=9.109; NsEucl=0.919; NSW=0.934; rcor=50; rNcor=18; rlogoDP=41; rNsEucl=28; rNSW=42; rank_mean=35.800; match_rank=19 a 0 0 0 0 0 0 97 39 592 596 0 420 596 0 27 174 c 0 0 0 0 0 0 161 349 0 0 0 176 0 0 0 43 g 0 0 0 0 0 0 59 0 1 0 0 0 0 0 20 318 t 0 0 0 0 0 0 279 208 3 0 596 0 0 596 549 61
ATHB6.ampDAP_M0440_AthalianaCistrome_shift6 (ATHB6.ampDAP:M0440:AthalianaCistrome)	0.856	0.778	10.499	0.915	0.928	60	20	12	34	54	36.000	20	; 1_m6_assembly_6 versus ATHB6.ampDAP_M0440_AthalianaCistrome (ATHB6.ampDAP:M0440:AthalianaCistrome); m=19/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 36; ------tCAATAATTg ; cor=0.856; Ncor=0.778; logoDP=10.499; NsEucl=0.915; NSW=0.928; rcor=60; rNcor=20; rlogoDP=12; rNsEucl=34; rNSW=54; rank_mean=36.000; match_rank=20 a 0 0 0 0 0 0 127 21 577 577 0 434 577 0 31 139 c 0 0 0 0 0 0 139 436 0 0 0 140 0 0 0 59 g 0 0 0 0 0 0 109 0 0 0 0 0 0 0 31 345 t 0 0 0 0 0 0 202 120 0 0 577 3 0 577 515 34
XP_013609718.1_HOMEOBOX_1_AT2G18550_EEAD0673_EEADannot_shift6 (XP_013609718.1_HOMEOBOX_1_AT2G18550:EEAD0673:EEADannot)	0.854	0.777	11.230	0.911	0.922	62	22	2	45	61	38.400	21	; 1_m6_assembly_6 versus XP_013609718.1_HOMEOBOX_1_AT2G18550_EEAD0673_EEADannot (XP_013609718.1_HOMEOBOX_1_AT2G18550:EEAD0673:EEADannot); m=20/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 38.4; ------hCAATAATTG ; cor=0.854; Ncor=0.777; logoDP=11.230; NsEucl=0.911; NSW=0.922; rcor=62; rNcor=22; rlogoDP=2; rNsEucl=45; rNSW=61; rank_mean=38.400; match_rank=21 a 0 0 0 0 0 0 27 10 100 100 2 99 100 1 8 9 c 0 0 0 0 0 0 38 79 0 0 0 1 0 0 0 2 g 0 0 0 0 0 0 6 0 0 0 0 0 0 0 2 73 t 0 0 0 0 0 0 29 11 0 0 98 0 0 99 90 16
HAT5.ampDAP_M0441_AthalianaCistrome_shift5 (HAT5.ampDAP:M0441:AthalianaCistrome)	0.887	0.634	11.188	0.924	0.942	33	115	3	20	27	39.600	22	; 1_m6_assembly_6 versus HAT5.ampDAP_M0441_AthalianaCistrome (HAT5.ampDAP:M0441:AthalianaCistrome); m=21/128; ncol2=14; w=-1; offset=-1; strand=D; shift=5; score= 39.6; -----wwcAATAATTg ; cor=0.887; Ncor=0.634; logoDP=11.188; NsEucl=0.924; NSW=0.942; rcor=33; rNcor=115; rlogoDP=3; rNsEucl=20; rNSW=27; rank_mean=39.600; match_rank=22 a 0 0 0 0 0 258 161 62 571 571 0 543 571 0 14 132 c 0 0 0 0 0 72 140 374 0 0 0 10 0 0 0 69 g 0 0 0 0 0 62 91 0 0 0 0 18 0 0 42 333 t 0 0 0 0 0 179 179 135 0 0 571 0 0 571 515 37
HB54_Mo17_1_EEAD0406_EEADannot_shift7 (HB54_Mo17_1:EEAD0406:EEADannot)	0.887	0.710	9.096	0.912	0.938	34	54	42	44	36	42.000	23	; 1_m6_assembly_6 versus HB54_Mo17_1_EEAD0406_EEADannot (HB54_Mo17_1:EEAD0406:EEADannot); m=22/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 42; -------CAATrATk- ; cor=0.887; Ncor=0.710; logoDP=9.096; NsEucl=0.912; NSW=0.938; rcor=34; rNcor=54; rlogoDP=42; rNsEucl=44; rNSW=36; rank_mean=42.000; match_rank=23 a 0 0 0 0 0 0 0 6 93 98 0 50 100 1 6 0 c 0 0 0 0 0 0 0 68 0 0 0 16 0 0 0 0 g 0 0 0 0 0 0 0 3 7 2 0 31 0 0 46 0 t 0 0 0 0 0 0 0 23 0 0 100 3 0 99 48 0
ATHB1_ATHB1_Athamap_rc_shift7 (ATHB1:ATHB1:Athamap_rc)	0.863	0.777	9.075	0.908	0.924	51	21	44	58	58	46.400	24	; 1_m6_assembly_6 versus ATHB1_ATHB1_Athamap_rc (ATHB1:ATHB1:Athamap_rc); m=23/128; ncol2=9; w=0; offset=1; strand=R; shift=7; score= 46.4; -------CAATAATTg ; cor=0.863; Ncor=0.777; logoDP=9.075; NsEucl=0.908; NSW=0.924; rcor=51; rNcor=21; rlogoDP=44; rNsEucl=58; rNSW=58; rank_mean=46.400; match_rank=24 a 0 0 0 0 0 0 0 0 25 25 0 20 25 0 1 3 c 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 4 g 0 0 0 0 0 0 0 1 0 0 0 5 0 0 1 13 t 0 0 0 0 0 0 0 3 0 0 25 0 0 25 22 3
HB21_EEAD0060_EEADannot_rc_shift7 (HB21:EEAD0060:EEADannot_rc)	0.852	0.766	10.039	0.903	0.916	64	25	19	77	77	52.400	25	; 1_m6_assembly_6 versus HB21_EEAD0060_EEADannot_rc (HB21:EEAD0060:EEADannot_rc); m=24/128; ncol2=9; w=0; offset=1; strand=R; shift=7; score= 52.4; -------yAATwATTr ; cor=0.852; Ncor=0.766; logoDP=10.039; NsEucl=0.903; NSW=0.916; rcor=64; rNcor=25; rlogoDP=19; rNsEucl=77; rNSW=77; rank_mean=52.400; match_rank=25 a 0 0 0 0 0 0 0 0 3 3 0 2 3 0 0 2 c 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 t 0 0 0 0 0 0 0 1 0 0 3 1 0 3 3 0
YAB1_UN0415.1_JASPAR_shift8 (YAB1:UN0415.1:JASPAR)	0.893	0.714	7.283	0.914	0.941	28	52	117	36	29	52.400	26	; 1_m6_assembly_6 versus YAB1_UN0415.1_JASPAR (YAB1:UN0415.1:JASPAR); m=25/128; ncol2=8; w=0; offset=2; strand=D; shift=8; score= 52.4; --------AATaATwA ; cor=0.893; Ncor=0.714; logoDP=7.283; NsEucl=0.914; NSW=0.941; rcor=28; rNcor=52; rlogoDP=117; rNsEucl=36; rNSW=29; rank_mean=52.400; match_rank=26 a 0 0 0 0 0 0 0 0 796 997 1.11 665 775 112 554 996 c 0 0 0 0 0 0 0 0 1.98 1.11 1.11 112 1.11 1.11 112 1.24 g 0 0 0 0 0 0 0 0 1.98 1.11 1.11 112 1.11 1.11 1.11 1.24 t 0 0 0 0 0 0 0 0 200 1.11 997 112 222 886 333 1.24
LMI1.DAP_M0413_AthalianaCistrome_rc_shift5 (LMI1.DAP:M0413:AthalianaCistrome_rc)	0.871	0.670	8.526	0.918	0.933	47	78	68	29	43	53.000	27	; 1_m6_assembly_6 versus LMI1.DAP_M0413_AthalianaCistrome_rc (LMI1.DAP:M0413:AthalianaCistrome_rc); m=26/128; ncol2=13; w=-1; offset=-1; strand=R; shift=5; score= 53; -----ahCAATAATTg ; cor=0.871; Ncor=0.670; logoDP=8.526; NsEucl=0.918; NSW=0.933; rcor=47; rNcor=78; rlogoDP=68; rNsEucl=29; rNSW=43; rank_mean=53.000; match_rank=27 a 0 0 0 0 0 327 166 66 600 598 0 582 599 2 35 73 c 0 0 0 0 0 37 180 461 0 1 2 0 0 0 5 72 g 0 0 0 0 0 97 98 1 0 0 0 2 0 1 70 404 t 0 0 0 0 0 139 156 72 0 1 598 16 1 597 490 51
HB22_Mo17_1_EEAD0404_EEADannot_shift3 (HB22_Mo17_1:EEAD0404:EEADannot)	0.889	0.592	9.580	0.928	0.948	31	174	31	13	20	53.800	28	; 1_m6_assembly_6 versus HB22_Mo17_1_EEAD0404_EEADannot (HB22_Mo17_1:EEAD0404:EEADannot); m=27/128; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score= 53.8; ---wammCAATaATTv ; cor=0.889; Ncor=0.592; logoDP=9.580; NsEucl=0.928; NSW=0.948; rcor=31; rNcor=174; rlogoDP=31; rNsEucl=13; rNSW=20; rank_mean=53.800; match_rank=28 a 0 0 0 34 52 42 28 6 98 99 0 64 100 0 7 32 c 0 0 0 11 14 30 31 70 0 0 1 8 0 0 0 26 g 0 0 0 12 20 11 19 0 1 1 0 18 0 0 22 34 t 0 0 0 43 14 17 22 24 1 0 99 10 0 100 71 8
ATHB51_ATHB51_ArabidopsisPBM_rc_shift6 (ATHB51:ATHB51:ArabidopsisPBM_rc)	0.859	0.859	5.747	0.919	0.935	56	1	166	26	41	58.000	29	; 1_m6_assembly_6 versus ATHB51_ATHB51_ArabidopsisPBM_rc (ATHB51:ATHB51:ArabidopsisPBM_rc); m=28/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 58; ------kCAATwATKr ; cor=0.859; Ncor=0.859; logoDP=5.747; NsEucl=0.919; NSW=0.935; rcor=56; rNcor=1; rlogoDP=166; rNsEucl=26; rNSW=41; rank_mean=58.000; match_rank=29 a 0 0 0 0 0 0 21 10 96 98 0 58 99 2 6 32 c 0 0 0 0 0 0 21 78 1 1 1 0 0 0 0 16 g 0 0 0 0 0 0 26 2 3 0 0 1 1 0 25 38 t 0 0 0 0 0 0 32 10 0 1 99 41 0 98 69 14
ATHB-6_MA0953.1_JASPAR_shift6 (ATHB-6:MA0953.1:JASPAR)	0.879	0.791	5.234	0.917	0.937	41	16	178	31	38	60.800	30	; 1_m6_assembly_6 versus ATHB-6_MA0953.1_JASPAR (ATHB-6:MA0953.1:JASPAR); m=29/128; ncol2=9; w=0; offset=0; strand=D; shift=6; score= 60.8; ------bcAATmATk- ; cor=0.879; Ncor=0.791; logoDP=5.234; NsEucl=0.917; NSW=0.937; rcor=41; rNcor=16; rlogoDP=178; rNsEucl=31; rNSW=38; rank_mean=60.800; match_rank=30 a 0 0 0 0 0 0 177 149 745 886 20 356 924 106 234 0 c 0 0 0 0 0 0 252 524 89 71 6 310 5 66 111 0 g 0 0 0 0 0 0 287 85 73 1 1 128 38 130 266 0 t 0 0 0 0 0 0 284 243 92 42 972 206 32 698 389 0
ATHB6_M0843_1.02_CISBP_shift6 (ATHB6:M0843_1.02:CISBP)	0.878	0.790	5.192	0.916	0.937	44	17	181	32	39	62.600	31	; 1_m6_assembly_6 versus ATHB6_M0843_1.02_CISBP (ATHB6:M0843_1.02:CISBP); m=30/128; ncol2=9; w=0; offset=0; strand=D; shift=6; score= 62.6; ------byAATmATk- ; cor=0.878; Ncor=0.790; logoDP=5.192; NsEucl=0.916; NSW=0.937; rcor=44; rNcor=17; rlogoDP=181; rNsEucl=32; rNSW=39; rank_mean=62.600; match_rank=31 a 0 0 0 0 0 0 18 15 75 89 2 35 92 11 23 0 c 0 0 0 0 0 0 25 52 9 7 1 31 1 7 11 0 g 0 0 0 0 0 0 29 8 7 0 0 13 4 13 27 0 t 0 0 0 0 0 0 28 25 9 4 97 21 3 69 39 0
ATHB40.ampDAP_M0409_AthalianaCistrome_shift3 (ATHB40.ampDAP:M0409:AthalianaCistrome)	0.846	0.604	9.843	0.914	0.927	69	155	26	35	55	68.000	32	; 1_m6_assembly_6 versus ATHB40.ampDAP_M0409_AthalianaCistrome (ATHB40.ampDAP:M0409:AthalianaCistrome); m=31/128; ncol2=14; w=-3; offset=-3; strand=D; shift=3; score= 68; ---rmayCAATwATTd ; cor=0.846; Ncor=0.604; logoDP=9.843; NsEucl=0.914; NSW=0.927; rcor=69; rNcor=155; rlogoDP=26; rNsEucl=35; rNSW=55; rank_mean=68.000; match_rank=32 a 0 0 0 226 189 351 137 14 599 599 0 291 599 0 90 176 c 0 0 0 78 203 56 197 520 0 0 0 47 0 0 9 35 g 0 0 0 150 108 59 71 1 0 0 0 40 0 0 58 209 t 0 0 0 145 99 133 194 64 0 0 599 221 0 599 442 179
ZHD3_MA1213.3_JASPAR_rc_shift7 (ZHD3:MA1213.3:JASPAR_rc)	0.841	0.757	9.005	0.901	0.911	72	28	52	97	93	68.400	33	; 1_m6_assembly_6 versus ZHD3_MA1213.3_JASPAR_rc (ZHD3:MA1213.3:JASPAR_rc); m=32/128; ncol2=9; w=0; offset=1; strand=R; shift=7; score= 68.4; -------CAATAATTG ; cor=0.841; Ncor=0.757; logoDP=9.005; NsEucl=0.901; NSW=0.911; rcor=72; rNcor=28; rlogoDP=52; rNsEucl=97; rNSW=93; rank_mean=68.400; match_rank=33 a 0 0 0 0 0 0 0 928 7271 7418 34 5843 7439 54 213 944 c 0 0 0 0 0 0 0 5524 67 29 14 247 8 5 26 189 g 0 0 0 0 0 0 0 148 30 11 7 247 19 23 133 5659 t 0 0 0 0 0 0 0 897 129 39 7442 1160 31 7415 7125 705
ZHD3_MA1213.2_JASPAR_rc_shift5 (ZHD3:MA1213.2:JASPAR_rc)	0.839	0.646	9.007	0.910	0.918	74	99	51	51	70	69.000	34	; 1_m6_assembly_6 versus ZHD3_MA1213.2_JASPAR_rc (ZHD3:MA1213.2:JASPAR_rc); m=33/128; ncol2=13; w=-1; offset=-1; strand=R; shift=5; score= 69; -----whCAATAATTG ; cor=0.839; Ncor=0.646; logoDP=9.007; NsEucl=0.910; NSW=0.918; rcor=74; rNcor=99; rlogoDP=51; rNsEucl=51; rNSW=70; rank_mean=69.000; match_rank=34 a 0 0 0 0 0 3101 2368 928 7271 7418 34 5843 7439 54 213 944 c 0 0 0 0 0 943 1964 5524 67 29 14 247 8 5 26 189 g 0 0 0 0 0 1209 824 148 30 11 7 247 19 23 133 5659 t 0 0 0 0 0 2244 2341 897 129 39 7442 1160 31 7415 7125 705
ATHB18_MA1211.1_JASPAR_rc_shift6 (ATHB18:MA1211.1:JASPAR_rc)	0.813	0.739	9.552	0.905	0.910	113	37	32	72	97	70.200	35	; 1_m6_assembly_6 versus ATHB18_MA1211.1_JASPAR_rc (ATHB18:MA1211.1:JASPAR_rc); m=34/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 70.2; ------myAATrATTr ; cor=0.813; Ncor=0.739; logoDP=9.552; NsEucl=0.905; NSW=0.910; rcor=113; rNcor=37; rlogoDP=32; rNsEucl=72; rNSW=97; rank_mean=70.200; match_rank=35 a 0 0 0 0 0 0 192 127 547 595 0 237 595 0 0 222 c 0 0 0 0 0 0 216 234 13 0 0 5 0 0 0 0 g 0 0 0 0 0 0 73 15 8 0 0 308 0 0 11 373 t 0 0 0 0 0 0 114 219 27 0 595 45 0 595 584 0
ATHB-40_MA1214.2_JASPAR_shift5 (ATHB-40:MA1214.2:JASPAR)	0.814	0.740	10.124	0.903	0.906	109	35	14	81	113	70.400	36	; 1_m6_assembly_6 versus ATHB-40_MA1214.2_JASPAR (ATHB-40:MA1214.2:JASPAR); m=35/128; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score= 70.4; -----acCAATwATTg ; cor=0.814; Ncor=0.740; logoDP=10.124; NsEucl=0.903; NSW=0.906; rcor=109; rNcor=35; rlogoDP=14; rNsEucl=81; rNSW=113; rank_mean=70.400; match_rank=36 a 0 0 0 0 0 404 111 21 600 600 0 388 600 0 56 92 c 0 0 0 0 0 25 325 530 0 0 0 18 0 0 5 9 g 0 0 0 0 0 68 68 0 0 0 0 25 0 0 41 397 t 0 0 0 0 0 103 96 49 0 0 600 169 0 600 498 102
ATHB5.ampDAP_M0412_AthalianaCistrome_rc_shift6 (ATHB5.ampDAP:M0412:AthalianaCistrome_rc)	0.832	0.832	5.953	0.911	0.920	85	7	154	46	64	71.200	37	; 1_m6_assembly_6 versus ATHB5.ampDAP_M0412_AthalianaCistrome_rc (ATHB5.ampDAP:M0412:AthalianaCistrome_rc); m=36/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 71.2; ------yyAATmATTg ; cor=0.832; Ncor=0.832; logoDP=5.953; NsEucl=0.911; NSW=0.920; rcor=85; rNcor=7; rlogoDP=154; rNsEucl=46; rNSW=64; rank_mean=71.200; match_rank=37 a 0 0 0 0 0 0 122 0 598 600 0 253 600 5 34 130 c 0 0 0 0 0 0 159 405 2 0 0 312 0 0 3 78 g 0 0 0 0 0 0 110 5 0 0 1 8 0 0 69 259 t 0 0 0 0 0 0 209 190 0 0 599 27 0 595 494 133
ATHB-51_MA0952.1_JASPAR_rc_shift7 (ATHB-51:MA0952.1:JASPAR_rc)	0.877	0.702	5.752	0.907	0.930	45	59	164	62	46	75.200	38	; 1_m6_assembly_6 versus ATHB-51_MA0952.1_JASPAR_rc (ATHB-51:MA0952.1:JASPAR_rc); m=37/128; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 75.2; -------CAATwATK- ; cor=0.877; Ncor=0.702; logoDP=5.752; NsEucl=0.907; NSW=0.930; rcor=45; rNcor=59; rlogoDP=164; rNsEucl=62; rNSW=46; rank_mean=75.200; match_rank=38 a 0 0 0 0 0 0 0 100 965 984 3 580 988 7 51 0 c 0 0 0 0 0 0 0 777 12 4 5 3 1 4 4 0 g 0 0 0 0 0 0 0 18 18 2 2 6 8 5 253 0 t 0 0 0 0 0 0 0 105 5 10 990 411 2 985 691 0
Solyc02g085630.3.1_HOMEOBOX_1_AT2G18550_EEAD0645_EEADannot_rc_shift5 (Solyc02g085630.3.1_HOMEOBOX_1_AT2G18550:EEAD0645:EEADannot_rc)	0.901	0.819	0.520	0.931	0.952	19	9	347	11	15	80.200	41	; 1_m6_assembly_6 versus Solyc02g085630.3.1_HOMEOBOX_1_AT2G18550_EEAD0645_EEADannot_rc (Solyc02g085630.3.1_HOMEOBOX_1_AT2G18550:EEAD0645:EEADannot_rc); m=38/128; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score= 80.2; -----whmAATAATTr ; cor=0.901; Ncor=0.819; logoDP=0.520; NsEucl=0.931; NSW=0.952; rcor=19; rNcor=9; rlogoDP=347; rNsEucl=11; rNSW=15; rank_mean=80.200; match_rank=41 a 0 0 0 0 0 63 27 27 100 100 0 78 100 0 17 28 c 0 0 0 0 0 5 38 61 0 0 0 1 0 0 1 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 54 t 0 0 0 0 0 32 35 12 0 0 100 21 0 100 75 12
Medtr8g106590.1_M0145_1.02_CISBP_shift6 (Medtr8g106590.1:M0145_1.02:CISBP)	0.867	0.694	5.617	0.906	0.929	49	64	169	69	51	80.400	42	; 1_m6_assembly_6 versus Medtr8g106590.1_M0145_1.02_CISBP (Medtr8g106590.1:M0145_1.02:CISBP); m=39/128; ncol2=8; w=0; offset=0; strand=D; shift=6; score= 80.4; ------AAAWTAAT-- ; cor=0.867; Ncor=0.694; logoDP=5.617; NsEucl=0.906; NSW=0.929; rcor=49; rNcor=64; rlogoDP=169; rNsEucl=69; rNSW=51; rank_mean=80.400; match_rank=42 a 0 0 0 0 0 0 84 88 83 69 17 83 76 18 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 g 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 4 12 17 31 83 17 21 78 0 0
HAT5_MA0008.1_JASPAR_rc_shift8 (HAT5:MA0008.1:JASPAR_rc)	0.923	0.738	1.109	0.926	0.956	10	38	327	16	13	80.800	43	; 1_m6_assembly_6 versus HAT5_MA0008.1_JASPAR_rc (HAT5:MA0008.1:JASPAR_rc); m=40/128; ncol2=8; w=0; offset=2; strand=R; shift=8; score= 80.8; --------AATAATTg ; cor=0.923; Ncor=0.738; logoDP=1.109; NsEucl=0.926; NSW=0.956; rcor=10; rNcor=38; rlogoDP=327; rNsEucl=16; rNSW=13; rank_mean=80.800; match_rank=43 a 0 0 0 0 0 0 0 0 23 24 0 20 25 0 3 5 c 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 4 g 0 0 0 0 0 0 0 0 0 0 0 5 0 0 1 13 t 0 0 0 0 0 0 0 0 0 1 24 0 0 25 21 3
Carub.0002s1646.1_HOMEOBOX_1_AT1G69780_EEAD0603_EEADannot_rc_shift5 (Carub.0002s1646.1_HOMEOBOX_1_AT1G69780:EEAD0603:EEADannot_rc)	0.921	0.837	0.262	0.938	0.961	12	5	378	7	10	82.400	44	; 1_m6_assembly_6 versus Carub.0002s1646.1_HOMEOBOX_1_AT1G69780_EEAD0603_EEADannot_rc (Carub.0002s1646.1_HOMEOBOX_1_AT1G69780:EEAD0603:EEADannot_rc); m=41/128; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score= 82.4; -----wwyAATAATTr ; cor=0.921; Ncor=0.837; logoDP=0.262; NsEucl=0.938; NSW=0.961; rcor=12; rNcor=5; rlogoDP=378; rNsEucl=7; rNSW=10; rank_mean=82.400; match_rank=44 a 0 0 0 0 0 61 29 21 100 100 0 85 100 0 8 29 c 0 0 0 0 0 0 18 43 0 0 0 0 0 0 0 7 g 0 0 0 0 0 2 7 3 0 0 0 8 0 0 8 50 t 0 0 0 0 0 37 46 33 0 0 100 7 0 100 84 14
AL2G28980.t1_HOMEOBOX_1_AT1G69780_EEAD0582_EEADannot_shift4 (AL2G28980.t1_HOMEOBOX_1_AT1G69780:EEAD0582:EEADannot)	0.835	0.627	9.673	0.901	0.912	79	126	29	94	90	83.600	45	; 1_m6_assembly_6 versus AL2G28980.t1_HOMEOBOX_1_AT1G69780_EEAD0582_EEADannot (AL2G28980.t1_HOMEOBOX_1_AT1G69780:EEAD0582:EEADannot); m=42/128; ncol2=11; w=-2; offset=-2; strand=D; shift=4; score= 83.6; ----wwTCAATwATT- ; cor=0.835; Ncor=0.627; logoDP=9.673; NsEucl=0.901; NSW=0.912; rcor=79; rNcor=126; rlogoDP=29; rNsEucl=94; rNSW=90; rank_mean=83.600; match_rank=45 a 0 0 0 0 59 67 12 9 99 99 0 46 100 0 8 0 c 0 0 0 0 12 5 10 68 0 1 0 7 0 0 0 0 g 0 0 0 0 1 2 2 0 0 0 0 6 0 0 6 0 t 0 0 0 0 28 26 76 23 1 0 100 41 0 100 86 0
ATHB-X_MA1211.2_JASPAR_rc_shift7 (ATHB-X:MA1211.2:JASPAR_rc)	0.818	0.736	9.551	0.897	0.904	104	40	33	120	123	84.000	46	; 1_m6_assembly_6 versus ATHB-X_MA1211.2_JASPAR_rc (ATHB-X:MA1211.2:JASPAR_rc); m=43/128; ncol2=9; w=0; offset=1; strand=R; shift=7; score= 84; -------yAATrATTr ; cor=0.818; Ncor=0.736; logoDP=9.551; NsEucl=0.897; NSW=0.904; rcor=104; rNcor=40; rlogoDP=33; rNsEucl=120; rNSW=123; rank_mean=84.000; match_rank=46 a 0 0 0 0 0 0 0 127 547 595 0 237 595 0 0 222 c 0 0 0 0 0 0 0 234 13 0 0 5 0 0 0 0 g 0 0 0 0 0 0 0 15 8 0 0 308 0 0 11 373 t 0 0 0 0 0 0 0 219 27 0 595 45 0 595 584 0
HB102_Mo17_1_EEAD0394_EEADannot_rc_shift2 (HB102_Mo17_1:EEAD0394:EEADannot_rc)	0.902	0.602	4.276	0.932	0.954	17	158	223	10	14	84.400	47	; 1_m6_assembly_6 versus HB102_Mo17_1_EEAD0394_EEADannot_rc (HB102_Mo17_1:EEAD0394:EEADannot_rc); m=44/128; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score= 84.4; --wwaahyAATAATTr ; cor=0.902; Ncor=0.602; logoDP=4.276; NsEucl=0.932; NSW=0.954; rcor=17; rNcor=158; rlogoDP=223; rNsEucl=10; rNSW=14; rank_mean=84.400; match_rank=47 a 0 0 39 31 47 52 29 8 100 100 0 73 100 0 6 32 c 0 0 20 10 18 24 29 66 0 0 0 7 0 0 0 24 g 0 0 11 9 21 8 14 0 0 0 0 14 0 0 18 35 t 0 0 30 50 14 16 28 26 0 0 100 6 0 100 76 9
XP_013589953.1_HOMEOBOX_1_AT1G69780_EEAD0666_EEADannot_rc_shift4 (XP_013589953.1_HOMEOBOX_1_AT1G69780:EEAD0666:EEADannot_rc)	0.862	0.647	4.995	0.911	0.928	53	98	188	47	53	87.800	49	; 1_m6_assembly_6 versus XP_013589953.1_HOMEOBOX_1_AT1G69780_EEAD0666_EEADannot_rc (XP_013589953.1_HOMEOBOX_1_AT1G69780:EEAD0666:EEADannot_rc); m=45/128; ncol2=11; w=-2; offset=-2; strand=R; shift=4; score= 87.8; ----awTyAATwATT- ; cor=0.862; Ncor=0.647; logoDP=4.995; NsEucl=0.911; NSW=0.928; rcor=53; rNcor=98; rlogoDP=188; rNsEucl=47; rNSW=53; rank_mean=87.800; match_rank=49 a 0 0 0 0 58 63 14 9 99 99 0 49 100 1 9 0 c 0 0 0 0 13 7 14 55 0 1 0 6 0 0 0 0 g 0 0 0 0 5 2 1 0 0 0 0 7 0 0 9 0 t 0 0 0 0 24 28 71 36 1 0 100 38 0 99 82 0
ATHB-6_MA0953.2_JASPAR_shift7 (ATHB-6:MA0953.2:JASPAR)	0.895	0.627	5.231	0.899	0.929	23	125	179	101	47	95.000		; 1_m6_assembly_6 versus ATHB-6_MA0953.2_JASPAR (ATHB-6:MA0953.2:JASPAR); m=46/128; ncol2=7; w=0; offset=1; strand=D; shift=7; score= 95; -------cAATmAT-- ; cor=0.895; Ncor=0.627; logoDP=5.231; NsEucl=0.899; NSW=0.929; rcor=23; rNcor=125; rlogoDP=179; rNsEucl=101; rNSW=47; rank_mean=95.000; match_rank= a 0 0 0 0 0 0 0 149 745 886 20 356 924 106 0 0 c 0 0 0 0 0 0 0 524 89 71 6 310 5 66 0 0 g 0 0 0 0 0 0 0 85 73 1 1 128 38 130 0 0 t 0 0 0 0 0 0 0 243 92 42 972 206 32 698 0 0
HAT22_MA1210.3_JASPAR_shift7 (HAT22:MA1210.3:JASPAR)	0.816	0.734	8.713	0.894	0.899	107	41	60	135	138	96.200		; 1_m6_assembly_6 versus HAT22_MA1210.3_JASPAR (HAT22:MA1210.3:JASPAR); m=47/128; ncol2=9; w=0; offset=1; strand=D; shift=7; score= 96.2; -------CAATAATTG ; cor=0.816; Ncor=0.734; logoDP=8.713; NsEucl=0.894; NSW=0.899; rcor=107; rNcor=41; rlogoDP=60; rNsEucl=135; rNSW=138; rank_mean=96.200; match_rank= a 0 0 0 0 0 0 0 362 3066 3127 55 2276 3128 52 83 259 c 0 0 0 0 0 0 0 2470 41 25 23 309 14 9 20 92 g 0 0 0 0 0 0 0 86 21 6 15 309 26 18 78 2650 t 0 0 0 0 0 0 0 298 88 58 3123 322 48 3137 3035 215
ATHB22_M0844_1.02_CISBP_shift7 (ATHB22:M0844_1.02:CISBP)	0.884	0.568	5.248	0.919	0.941	38	209	177	27	30	96.200		; 1_m6_assembly_6 versus ATHB22_M0844_1.02_CISBP (ATHB22:M0844_1.02:CISBP); m=48/128; ncol2=13; w=0; offset=1; strand=D; shift=7; score= 96.2; -------twATAATwt ; cor=0.884; Ncor=0.568; logoDP=5.248; NsEucl=0.919; NSW=0.941; rcor=38; rNcor=209; rlogoDP=177; rNsEucl=27; rNSW=30; rank_mean=96.200; match_rank= a 0 0 0 0 0 0 0 23 36 70 15 83 90 0 50 22 c 0 0 0 0 0 0 0 23 18 10 6 2 0 0 0 13 g 0 0 0 0 0 0 0 22 18 10 5 2 10 0 0 2 t 0 0 0 0 0 0 0 32 28 10 74 13 0 100 50 63
HAT22_MA1210.2_JASPAR_shift5 (HAT22:MA1210.2:JASPAR)	0.814	0.626	8.714	0.904	0.907	112	128	59	76	108	96.600		; 1_m6_assembly_6 versus HAT22_MA1210.2_JASPAR (HAT22:MA1210.2:JASPAR); m=49/128; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score= 96.6; -----wwCAATAATTG ; cor=0.814; Ncor=0.626; logoDP=8.714; NsEucl=0.904; NSW=0.907; rcor=112; rNcor=128; rlogoDP=59; rNsEucl=76; rNSW=108; rank_mean=96.600; match_rank= a 0 0 0 0 0 1122 950 362 3066 3127 55 2276 3128 52 83 259 c 0 0 0 0 0 540 791 2470 41 25 23 309 14 9 20 92 g 0 0 0 0 0 543 488 86 21 6 15 309 26 18 78 2650 t 0 0 0 0 0 1011 987 298 88 58 3123 322 48 3137 3035 215
ICU4_ICU4_ArabidopsisPBM_shift6 (ICU4:ICU4:ArabidopsisPBM)	0.782	0.782	6.117	0.903	0.905	170	19	148	82	114	106.600		; 1_m6_assembly_6 versus ICU4_ICU4_ArabidopsisPBM (ICU4:ICU4:ArabidopsisPBM); m=50/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 106.6; ------gTAATdATTA ; cor=0.782; Ncor=0.782; logoDP=6.117; NsEucl=0.903; NSW=0.905; rcor=170; rNcor=19; rlogoDP=148; rNsEucl=82; rNSW=114; rank_mean=106.600; match_rank= a 0 0 0 0 0 0 20 9 72 92 5 27 93 3 3 68 c 0 0 0 0 0 0 7 17 19 3 0 7 1 2 6 6 g 0 0 0 0 0 0 64 6 6 2 2 28 1 2 19 17 t 0 0 0 0 0 0 9 68 3 3 93 38 5 93 72 9
HAT5_MA0008.4_JASPAR_shift7 (HAT5:MA0008.4:JASPAR)	0.808	0.728	10.077	0.889	0.889	123	44	17	174	185	108.600		; 1_m6_assembly_6 versus HAT5_MA0008.4_JASPAR (HAT5:MA0008.4:JASPAR); m=51/128; ncol2=9; w=0; offset=1; strand=D; shift=7; score= 108.6; -------CAATWATTG ; cor=0.808; Ncor=0.728; logoDP=10.077; NsEucl=0.889; NSW=0.889; rcor=123; rNcor=44; rlogoDP=17; rNsEucl=174; rNSW=185; rank_mean=108.600; match_rank= a 0 0 0 0 0 0 0 16 190 190 1 134 189 0 6 13 c 0 0 0 0 0 0 0 148 1 0 0 2 0 0 0 5 g 0 0 0 0 0 0 0 1 0 0 0 2 0 0 4 168 t 0 0 0 0 0 0 0 26 0 1 190 53 2 191 181 5
HMGB10_UN0863.1_JASPAR_shift7 (HMGB10:UN0863.1:JASPAR)	0.892	0.535	8.414	0.891	0.929	30	246	69	157	48	110.000		; 1_m6_assembly_6 versus HMGB10_UN0863.1_JASPAR (HMGB10:UN0863.1:JASPAR); m=52/128; ncol2=6; w=0; offset=1; strand=D; shift=7; score= 110; -------TwATAA--- ; cor=0.892; Ncor=0.535; logoDP=8.414; NsEucl=0.891; NSW=0.929; rcor=30; rNcor=246; rlogoDP=69; rNsEucl=157; rNSW=48; rank_mean=110.000; match_rank= a 0 0 0 0 0 0 0 0 662 1000 0 1000 1000 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 1000 338 0 1000 0 0 0 0 0
ATHB-15_MA1026.1_JASPAR_rc_shift8 (ATHB-15:MA1026.1:JASPAR_rc)	0.868	0.694	0.904	0.906	0.929	48	63	330	66	49	111.200		; 1_m6_assembly_6 versus ATHB-15_MA1026.1_JASPAR_rc (ATHB-15:MA1026.1:JASPAR_rc); m=53/128; ncol2=8; w=0; offset=2; strand=R; shift=8; score= 111.2; --------AAThATTa ; cor=0.868; Ncor=0.694; logoDP=0.904; NsEucl=0.906; NSW=0.929; rcor=48; rNcor=63; rlogoDP=330; rNsEucl=66; rNSW=49; rank_mean=111.200; match_rank= a 0 0 0 0 0 0 0 0 722 926 46 381 928 26 28 675 c 0 0 0 0 0 0 0 0 193 32 10 282 16 15 57 60 g 0 0 0 0 0 0 0 0 57 15 16 62 10 32 193 172 t 0 0 0 0 0 0 0 0 28 26 928 274 46 926 722 93
HAHB-4_HAHB4_Athamap_shift7 (HAHB-4:HAHB4:Athamap)	0.798	0.718	9.830	0.890	0.891	144	48	28	164	174	111.600		; 1_m6_assembly_6 versus HAHB-4_HAHB4_Athamap (HAHB-4:HAHB4:Athamap); m=54/128; ncol2=9; w=0; offset=1; strand=D; shift=7; score= 111.6; -------TAATrATTg ; cor=0.798; Ncor=0.718; logoDP=9.830; NsEucl=0.890; NSW=0.891; rcor=144; rNcor=48; rlogoDP=28; rNsEucl=164; rNSW=174; rank_mean=111.600; match_rank= a 0 0 0 0 0 0 0 1 25 25 0 7 25 0 3 6 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 g 0 0 0 0 0 0 0 0 0 0 0 14 0 0 3 14 t 0 0 0 0 0 0 0 24 0 0 25 4 0 25 18 0
YAB1_YAB1_ArabidopsisPBM_shift7 (YAB1:YAB1:ArabidopsisPBM)	0.813	0.665	5.112	0.901	0.912	114	85	183	90	88	112.000		; 1_m6_assembly_6 versus YAB1_YAB1_ArabidopsisPBM (YAB1:YAB1:ArabidopsisPBM); m=55/128; ncol2=10; w=0; offset=1; strand=D; shift=7; score= 112; -------ywATmATAA ; cor=0.813; Ncor=0.665; logoDP=5.112; NsEucl=0.901; NSW=0.912; rcor=114; rNcor=85; rlogoDP=183; rNsEucl=90; rNSW=88; rank_mean=112.000; match_rank= a 0 0 0 0 0 0 0 9 65 86 4 29 91 5 73 77 c 0 0 0 0 0 0 0 47 3 3 2 42 1 3 9 5 g 0 0 0 0 0 0 0 11 4 2 4 13 5 4 11 8 t 0 0 0 0 0 0 0 33 28 9 90 16 3 88 7 10
HAT2.ampDAP_M0432_AthalianaCistrome_shift6 (HAT2.ampDAP:M0432:AthalianaCistrome)	0.772	0.702	9.187	0.897	0.894	198	58	37	117	157	113.400		; 1_m6_assembly_6 versus HAT2.ampDAP_M0432_AthalianaCistrome (HAT2.ampDAP:M0432:AthalianaCistrome); m=56/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 113.4; ------yyAATCATTw ; cor=0.772; Ncor=0.702; logoDP=9.187; NsEucl=0.897; NSW=0.894; rcor=198; rNcor=58; rlogoDP=37; rNsEucl=117; rNSW=157; rank_mean=113.400; match_rank= a 0 0 0 0 0 0 147 20 581 599 0 11 599 8 106 184 c 0 0 0 0 0 0 150 272 19 1 0 450 1 4 15 38 g 0 0 0 0 0 0 107 0 0 0 0 38 0 0 23 141 t 0 0 0 0 0 0 196 308 0 0 600 101 0 588 456 237
ATHB21_MA1213.1_JASPAR_shift3 (ATHB21:MA1213.1:JASPAR)	0.803	0.573	9.924	0.901	0.902	135	202	22	92	132	116.600		; 1_m6_assembly_6 versus ATHB21_MA1213.1_JASPAR (ATHB21:MA1213.1:JASPAR); m=57/128; ncol2=14; w=-3; offset=-3; strand=D; shift=3; score= 116.6; ---rcamCAATwATTg ; cor=0.803; Ncor=0.573; logoDP=9.924; NsEucl=0.901; NSW=0.902; rcor=135; rNcor=202; rlogoDP=22; rNsEucl=92; rNSW=132; rank_mean=116.600; match_rank= a 0 0 0 187 129 376 152 2 597 597 0 286 597 0 75 131 c 0 0 0 95 260 44 283 565 0 0 0 27 0 0 5 16 g 0 0 0 175 124 72 45 0 0 0 0 26 0 0 50 319 t 0 0 0 140 84 105 117 30 0 0 597 258 0 597 467 131
HAT5_MA0008.2_JASPAR_rc_shift6 (HAT5:MA0008.2:JASPAR_rc)	0.835	0.696	1.475	0.908	0.916	81	62	317	57	78	119.000		; 1_m6_assembly_6 versus HAT5_MA0008.2_JASPAR_rc (HAT5:MA0008.2:JASPAR_rc); m=58/128; ncol2=12; w=0; offset=0; strand=R; shift=6; score= 119; ------sCAATAATTg ; cor=0.835; Ncor=0.696; logoDP=1.475; NsEucl=0.908; NSW=0.916; rcor=81; rNcor=62; rlogoDP=317; rNsEucl=57; rNSW=78; rank_mean=119.000; match_rank= a 0 0 0 0 0 0 1 0 25 25 0 20 25 0 1 3 c 0 0 0 0 0 0 4 12 0 0 0 0 0 0 0 4 g 0 0 0 0 0 0 8 1 0 0 0 5 0 0 1 13 t 0 0 0 0 0 0 2 3 0 0 25 0 0 25 22 3
HAT5_MA0008.3_JASPAR_shift4 (HAT5:MA0008.3:JASPAR)	0.804	0.536	10.082	0.898	0.897	134	245	16	110	145	130.000		; 1_m6_assembly_6 versus HAT5_MA0008.3_JASPAR (HAT5:MA0008.3:JASPAR); m=59/128; ncol2=15; w=-2; offset=-2; strand=D; shift=4; score= 130; ----wwwCAATWATTG ; cor=0.804; Ncor=0.536; logoDP=10.082; NsEucl=0.898; NSW=0.897; rcor=134; rNcor=245; rlogoDP=16; rNsEucl=110; rNSW=145; rank_mean=130.000; match_rank= a 0 0 0 0 72 80 50 16 190 190 1 134 189 0 6 13 c 0 0 0 0 32 27 31 148 1 0 0 2 0 0 0 5 g 0 0 0 0 29 18 20 1 0 0 0 2 0 0 4 168 t 0 0 0 0 58 66 90 26 0 1 190 53 2 191 181 5
ATHB-4_MA1406.2_JASPAR_rc_shift7 (ATHB-4:MA1406.2:JASPAR_rc)	0.778	0.700	8.173	0.888	0.887	185	61	75	198	199	143.600		; 1_m6_assembly_6 versus ATHB-4_MA1406.2_JASPAR_rc (ATHB-4:MA1406.2:JASPAR_rc); m=60/128; ncol2=9; w=0; offset=1; strand=R; shift=7; score= 143.6; -------CAATsATTr ; cor=0.778; Ncor=0.700; logoDP=8.173; NsEucl=0.888; NSW=0.887; rcor=185; rNcor=61; rlogoDP=75; rNsEucl=198; rNSW=199; rank_mean=143.600; match_rank= a 0 0 0 0 0 0 0 9947 90866 98352 473 13246 99294 268 13829 55312 c 0 0 0 0 0 0 0 68409 2806 422 333 40460 76 93 618 1915 g 0 0 0 0 0 0 0 3599 764 228 66 42828 333 1291 3298 40381 t 0 0 0 0 0 0 0 18045 5565 998 99128 3466 297 98348 82255 2392
ATHB4_MA1406.1_JASPAR_rc_shift6 (ATHB4:MA1406.1:JASPAR_rc)	0.763	0.763	4.971	0.895	0.890	222	27	189	129	180	149.400		; 1_m6_assembly_6 versus ATHB4_MA1406.1_JASPAR_rc (ATHB4:MA1406.1:JASPAR_rc); m=61/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 149.4; ------sCAATsATTr ; cor=0.763; Ncor=0.763; logoDP=4.971; NsEucl=0.895; NSW=0.890; rcor=222; rNcor=27; rlogoDP=189; rNsEucl=129; rNSW=180; rank_mean=149.400; match_rank= a 0 0 0 0 0 0 18616 9947 90866 98352 473 13246 99294 268 13829 55312 c 0 0 0 0 0 0 35017 68409 2806 422 333 40460 76 93 618 1915 g 0 0 0 0 0 0 33825 3599 764 228 66 42828 333 1291 3298 40381 t 0 0 0 0 0 0 12542 18045 5565 998 99128 3466 297 98348 82255 2392
AT4G17950_M0119_1.02_CISBP_shift6 (AT4G17950:M0119_1.02:CISBP)	0.745	0.745	5.494	0.897	0.894	278	33	172	115	152	150.000		; 1_m6_assembly_6 versus AT4G17950_M0119_1.02_CISBP (AT4G17950:M0119_1.02:CISBP); m=62/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 150; ------dAWWTAWWta ; cor=0.745; Ncor=0.745; logoDP=5.494; NsEucl=0.897; NSW=0.894; rcor=278; rNcor=33; rlogoDP=172; rNsEucl=115; rNSW=152; rank_mean=150.000; match_rank= a 0 0 0 0 0 0 25 83 29 70 0 80 69 30 21 32 c 0 0 0 0 0 0 15 2 0 0 0 0 0 0 10 23 g 0 0 0 0 0 0 25 2 0 0 0 0 0 0 10 22 t 0 0 0 0 0 0 35 13 71 30 100 20 31 70 59 23
LMI1.ampDAP_M0411_AthalianaCistrome_rc_shift4 (LMI1.ampDAP:M0411:AthalianaCistrome_rc)	0.833	0.641	0.176	0.904	0.909	83	104	398	74	101	152.000		; 1_m6_assembly_6 versus LMI1.ampDAP_M0411_AthalianaCistrome_rc (LMI1.ampDAP:M0411:AthalianaCistrome_rc); m=63/128; ncol2=13; w=-2; offset=-2; strand=R; shift=4; score= 152; ----aamCAATAATTG ; cor=0.833; Ncor=0.641; logoDP=0.176; NsEucl=0.904; NSW=0.909; rcor=83; rNcor=104; rlogoDP=398; rNsEucl=74; rNSW=101; rank_mean=152.000; match_rank= a 0 0 0 0 244 337 151 32 598 598 0 592 598 0 34 25 c 0 0 0 0 117 36 211 515 0 0 0 0 0 0 0 66 g 0 0 0 0 90 97 98 0 0 0 0 0 0 0 63 492 t 0 0 0 0 147 128 138 51 0 0 598 6 0 598 501 15
CmMAF2_EEAD0072_EEADannot_shift5 (CmMAF2:EEAD0072:EEADannot)	0.778	0.637	7.915	0.888	0.887	181	109	81	195	197	152.600		; 1_m6_assembly_6 versus CmMAF2_EEAD0072_EEADannot (CmMAF2:EEAD0072:EEADannot); m=64/128; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score= 152.6; -----CwwAwwAAwG- ; cor=0.778; Ncor=0.637; logoDP=7.915; NsEucl=0.888; NSW=0.887; rcor=181; rNcor=109; rlogoDP=81; rNsEucl=195; rNSW=197; rank_mean=152.600; match_rank= a 0 0 0 0 0 0 1 1 3 2 1 3 3 1 0 0 c 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 t 0 0 0 0 0 0 2 2 0 1 2 0 0 2 0 0
YAB5_UN0416.1_JASPAR_rc_shift6 (YAB5:UN0416.1:JASPAR_rc)	0.779	0.649	0.738	0.904	0.907	180	94	333	75	106	157.600		; 1_m6_assembly_6 versus YAB5_UN0416.1_JASPAR_rc (YAB5:UN0416.1:JASPAR_rc); m=65/128; ncol2=12; w=0; offset=0; strand=R; shift=6; score= 157.6; ------tsdwTAATtA ; cor=0.779; Ncor=0.649; logoDP=0.738; NsEucl=0.904; NSW=0.907; rcor=180; rNcor=94; rlogoDP=333; rNsEucl=75; rNSW=106; rank_mean=157.600; match_rank= a 0 0 0 0 0 0 224 200 270 447 0.34 904 809 0.34 26 752 c 0 0 0 0 0 0 224 303 172 153 0.34 0.34 96 0.34 227 51 g 0 0 0 0 0 0 224 297 276 52 94 0.34 0.34 96 121 51 t 0 0 0 0 0 0 328 200 282.79 348 904.83 95 94 903 625 147
AHL12_AHL12_2_ArabidopsisPBM_rc_shift8 (AHL12:AHL12_2:ArabidopsisPBM_rc)	0.831	0.554	3.454	0.893	0.909	88	222	262	137	100	161.800		; 1_m6_assembly_6 versus AHL12_AHL12_2_ArabidopsisPBM_rc (AHL12:AHL12_2:ArabidopsisPBM_rc); m=66/128; ncol2=10; w=0; offset=2; strand=R; shift=8; score= 161.8; --------AwwAWWTw ; cor=0.831; Ncor=0.554; logoDP=3.454; NsEucl=0.893; NSW=0.909; rcor=88; rNcor=222; rlogoDP=262; rNsEucl=137; rNSW=100; rank_mean=161.800; match_rank= a 0 0 0 0 0 0 0 0 74 56 37 79 74 25 20 59 c 0 0 0 0 0 0 0 0 3 2 2 0 0 1 1 2 g 0 0 0 0 0 0 0 0 18 2 2 1 1 0 0 2 t 0 0 0 0 0 0 0 0 5 40 59 20 25 74 79 37
ATHB53.ampDAP_M0420_AthalianaCistrome_rc_shift3 (ATHB53.ampDAP:M0420:AthalianaCistrome_rc)	0.828	0.552	0.241	0.909	0.917	89	226	382	53	73	164.600		; 1_m6_assembly_6 versus ATHB53.ampDAP_M0420_AthalianaCistrome_rc (ATHB53.ampDAP:M0420:AthalianaCistrome_rc); m=67/128; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score= 164.6; ---rmahCAATwATTk ; cor=0.828; Ncor=0.552; logoDP=0.241; NsEucl=0.909; NSW=0.917; rcor=89; rNcor=226; rlogoDP=382; rNsEucl=53; rNSW=73; rank_mean=164.600; match_rank= a 0 0 0 164 167 319 160 7 592 592 0 295 592 0 54 117 c 0 0 0 112 195 61 211 541 0 0 0 50 0 0 9 44 g 0 0 0 185 136 77 72 0 0 0 0 36 0 0 84 270 t 0 0 0 131 94 135 149 44 0 0 592 211 0 592 445 161
ZHD1_MA1329.2_JASPAR_shift6 (ZHD1:MA1329.2:JASPAR)	0.764	0.587	7.353	0.895	0.889	217	185	114	131	183	166.000		; 1_m6_assembly_6 versus ZHD1_MA1329.2_JASPAR (ZHD1:MA1329.2:JASPAR); m=68/128; ncol2=13; w=0; offset=0; strand=D; shift=6; score= 166; ------wwAyTAATTA ; cor=0.764; Ncor=0.587; logoDP=7.353; NsEucl=0.895; NSW=0.889; rcor=217; rNcor=185; rlogoDP=114; rNsEucl=131; rNSW=183; rank_mean=166.000; match_rank= a 0 0 0 0 0 0 834 967 1813 386 47 2412 2417 25 19 2382 c 0 0 0 0 0 0 351 422 246 1155 24 14 15 29 43 14 g 0 0 0 0 0 0 309 333 193 193 9 26 18 9 12 25 t 0 0 0 0 0 0 978 750 220 738 2392 20 22 2409 2398 51
AHL12_AHL12_ArabidopsisPBM_rc_shift6 (AHL12:AHL12:ArabidopsisPBM_rc)	0.742	0.742	4.018	0.897	0.894	291	34	237	116	155	166.600		; 1_m6_assembly_6 versus AHL12_AHL12_ArabidopsisPBM_rc (AHL12:AHL12:ArabidopsisPBM_rc); m=69/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 166.6; ------wAAwwwwTTw ; cor=0.742; Ncor=0.742; logoDP=4.018; NsEucl=0.897; NSW=0.894; rcor=291; rNcor=34; rlogoDP=237; rNsEucl=116; rNSW=155; rank_mean=166.600; match_rank= a 0 0 0 0 0 0 37 77 84 48 33 66 50 10 6 42 c 0 0 0 0 0 0 14 2 4 1 1 0 0 2 15 13 g 0 0 0 0 0 0 11 15 2 1 0 1 2 4 2 8 t 0 0 0 0 0 0 38 6 10 50 66 33 48 84 77 37
ATHB-4_M0845_1.02_CISBP_shift6 (ATHB-4:M0845_1.02:CISBP)	0.748	0.748	2.822	0.897	0.894	266	32	283	118	158	171.400		; 1_m6_assembly_6 versus ATHB-4_M0845_1.02_CISBP (ATHB-4:M0845_1.02:CISBP); m=70/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 171.4; ------syAATcAttr ; cor=0.748; Ncor=0.748; logoDP=2.822; NsEucl=0.897; NSW=0.894; rcor=266; rNcor=32; rlogoDP=283; rNsEucl=118; rNSW=158; rank_mean=171.400; match_rank= a 0 0 0 0 0 0 17 11 77 79 12 13 75 23 22 30 c 0 0 0 0 0 0 35 48 7 9 4 59 6 13 20 18 g 0 0 0 0 0 0 27 4 3 5 7 14 8 11 20 29 t 0 0 0 0 0 0 21 37 13 7 77 14 11 53 38 23
HAT2_MA1198.1_JASPAR_shift5 (HAT2:MA1198.1:JASPAR)	0.735	0.668	8.609	0.889	0.877	317	80	65	173	251	177.200		; 1_m6_assembly_6 versus HAT2_MA1198.1_JASPAR (HAT2:MA1198.1:JASPAR); m=71/128; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score= 177.2; -----wyyAATCATtw ; cor=0.735; Ncor=0.668; logoDP=8.609; NsEucl=0.889; NSW=0.877; rcor=317; rNcor=80; rlogoDP=65; rNsEucl=173; rNSW=251; rank_mean=177.200; match_rank= a 0 0 0 0 0 300 110 0 598 598 0 0 598 113 114 229 c 0 0 0 0 0 23 186 249 0 0 0 541 0 12 42 52 g 0 0 0 0 0 43 112 0 0 0 0 0 0 0 36 131 t 0 0 0 0 0 232 190 349 0 0 598 57 0 473 406 186
HAT1_M0851_1.02_CISBP_shift6 (HAT1:M0851_1.02:CISBP)	0.723	0.723	9.027	0.886	0.870	347	46	48	209	301	190.200		; 1_m6_assembly_6 versus HAT1_M0851_1.02_CISBP (HAT1:M0851_1.02:CISBP); m=72/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 190.2; ------syAATCATkr ; cor=0.723; Ncor=0.723; logoDP=9.027; NsEucl=0.886; NSW=0.870; rcor=347; rNcor=46; rlogoDP=48; rNsEucl=209; rNSW=301; rank_mean=190.200; match_rank= a 0 0 0 0 0 0 15 7 100 100 0 0 100 10 10 35 c 0 0 0 0 0 0 37 50 0 0 0 100 0 0 10 18 g 0 0 0 0 0 0 33 7 0 0 0 0 0 0 29 29 t 0 0 0 0 0 0 15 36 0 0 100 0 0 90 51 18
HAT1_MA1024.1_JASPAR_shift6 (HAT1:MA1024.1:JASPAR)	0.722	0.722	9.035	0.886	0.870	348	47	46	210	304	191.000		; 1_m6_assembly_6 versus HAT1_MA1024.1_JASPAR (HAT1:MA1024.1:JASPAR); m=73/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 191; ------syAATCATkr ; cor=0.722; Ncor=0.722; logoDP=9.035; NsEucl=0.886; NSW=0.870; rcor=348; rNcor=47; rlogoDP=46; rNsEucl=210; rNSW=304; rank_mean=191.000; match_rank= a 0 0 0 0 0 0 149 69 1000 1000 0 0 1000 98 101 349 c 0 0 0 0 0 0 374 506 0 0 0 1000 0 0 101 181 g 0 0 0 0 0 0 328 69 0 0 0 0 0 0 286 289 t 0 0 0 0 0 0 149 356 0 0 1000 0 0 902 512 181
ATHB18.ampDAP_M0433_AthalianaCistrome_shift6 (ATHB18.ampDAP:M0433:AthalianaCistrome)	0.736	0.669	9.521	0.885	0.868	314	79	34	216	314	191.400		; 1_m6_assembly_6 versus ATHB18.ampDAP_M0433_AthalianaCistrome (ATHB18.ampDAP:M0433:AthalianaCistrome); m=74/128; ncol2=11; w=0; offset=0; strand=D; shift=6; score= 191.4; ------myAATGATTr ; cor=0.736; Ncor=0.669; logoDP=9.521; NsEucl=0.885; NSW=0.868; rcor=314; rNcor=79; rlogoDP=34; rNsEucl=216; rNSW=314; rank_mean=191.400; match_rank= a 0 0 0 0 0 0 154 66 571 592 0 97 592 0 1 200 c 0 0 0 0 0 0 185 334 6 0 0 0 0 0 0 0 g 0 0 0 0 0 0 119 8 4 0 0 457 0 0 7 392 t 0 0 0 0 0 0 134 184 11 0 592 38 0 592 584 0
TRANSCRIPTION_1qn8_B_3D-footprint_shift4 (TRANSCRIPTION:1qn8_B:3D-footprint)	0.845	0.423	6.249	0.880	0.913	70	410	139	262	82	192.600		; 1_m6_assembly_6 versus TRANSCRIPTION_1qn8_B_3D-footprint (TRANSCRIPTION:1qn8_B:3D-footprint); m=75/128; ncol2=8; w=-2; offset=-2; strand=D; shift=4; score= 192.6; ----CTTTAATA---- ; cor=0.845; Ncor=0.423; logoDP=6.249; NsEucl=0.880; NSW=0.913; rcor=70; rNcor=410; rlogoDP=139; rNsEucl=262; rNSW=82; rank_mean=192.600; match_rank= a 0 0 0 0 9 0 11 0 96 67 0 96 0 0 0 0 c 0 0 0 0 67 0 9 0 0 11 0 0 0 0 0 0 g 0 0 0 0 9 0 9 0 0 9 0 0 0 0 0 0 t 0 0 0 0 11 96 67 96 0 9 96 0 0 0 0 0
ATHB-5_MA0110.3_JASPAR_shift5 (ATHB-5:MA0110.3:JASPAR)	0.736	0.613	7.546	0.890	0.878	316	139	105	166	242	193.600		; 1_m6_assembly_6 versus ATHB-5_MA0110.3_JASPAR (ATHB-5:MA0110.3:JASPAR); m=76/128; ncol2=12; w=-1; offset=-1; strand=D; shift=5; score= 193.6; -----wwCAATCATTw ; cor=0.736; Ncor=0.613; logoDP=7.546; NsEucl=0.890; NSW=0.878; rcor=316; rNcor=139; rlogoDP=105; rNsEucl=166; rNSW=242; rank_mean=193.600; match_rank= a 0 0 0 0 0 3639 2718 1051 9632 9563 230 841 9809 648 633 3099 c 0 0 0 0 0 1914 2228 7517 197 154 98 8049 48 178 312 1661 g 0 0 0 0 0 1346 1336 386 74 50 59 254 51 175 394 2309 t 0 0 0 0 0 3223 3840 1168 219 355 9735 978 214 9121 8783 3053
HB68_GT1_B73_1_m1_EEAD0409_EEADannot_shift5 (HB68_GT1_B73_1_m1:EEAD0409:EEADannot)	0.742	0.675	10.042	0.882	0.861	287	72	18	250	348	195.000		; 1_m6_assembly_6 versus HB68_GT1_B73_1_m1_EEAD0409_EEADannot (HB68_GT1_B73_1_m1:EEAD0409:EEADannot); m=77/128; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score= 195; -----ACCAATwATTG ; cor=0.742; Ncor=0.675; logoDP=10.042; NsEucl=0.882; NSW=0.861; rcor=287; rNcor=72; rlogoDP=18; rNsEucl=250; rNSW=348; rank_mean=195.000; match_rank= a 0 0 0 0 0 86 6 4 100 100 0 54 100 0 5 10 c 0 0 0 0 0 2 76 93 0 0 0 1 0 0 1 1 g 0 0 0 0 0 8 0 0 0 0 0 6 0 0 2 78 t 0 0 0 0 0 4 18 3 0 0 100 39 0 100 92 11
YAB5_YAB5_ArabidopsisPBM_rc_shift6 (YAB5:YAB5:ArabidopsisPBM_rc)	0.729	0.729	2.051	0.895	0.889	335	43	295	132	186	198.200		; 1_m6_assembly_6 versus YAB5_YAB5_ArabidopsisPBM_rc (YAB5:YAB5:ArabidopsisPBM_rc); m=78/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 198.2; ------dTAaTcATtw ; cor=0.729; Ncor=0.729; logoDP=2.051; NsEucl=0.895; NSW=0.889; rcor=335; rNcor=43; rlogoDP=295; rNsEucl=132; rNSW=186; rank_mean=198.200; match_rank= a 0 0 0 0 0 0 29 4 71 66 15 5 74 8 21 27 c 0 0 0 0 0 0 16 6 10 5 3 53 3 5 18 22 g 0 0 0 0 0 0 26 17 4 19 4 24 16 9 8 23 t 0 0 0 0 0 0 29 73 15 10 78 18 7 78 53 28
ATHB24.ampDAP_M0858_AthalianaCistrome_shift5 (ATHB24.ampDAP:M0858:AthalianaCistrome)	0.751	0.501	6.604	0.893	0.885	256	289	127	140	205	203.400		; 1_m6_assembly_6 versus ATHB24.ampDAP_M0858_AthalianaCistrome (ATHB24.ampDAP:M0858:AthalianaCistrome); m=79/128; ncol2=15; w=-1; offset=-1; strand=D; shift=5; score= 203.4; -----aawwrTAATTA ; cor=0.751; Ncor=0.501; logoDP=6.604; NsEucl=0.893; NSW=0.885; rcor=256; rNcor=289; rlogoDP=127; rNsEucl=140; rNSW=205; rank_mean=203.400; match_rank= a 0 0 0 0 0 400 354 295 236 240 6 496 592 0 0 597 c 0 0 0 0 0 48 53 53 111 39 14 10 0 0 0 0 g 0 0 0 0 0 28 47 47 82 200 0 94 8 0 0 2 t 0 0 0 0 0 124 146 205 171 121 580 0 0 600 600 1
ATHB12_ATHB12_ArabidopsisPBM_rc_shift6 (ATHB12:ATHB12:ArabidopsisPBM_rc)	0.725	0.725	3.650	0.891	0.882	342	45	256	158	224	205.000		; 1_m6_assembly_6 versus ATHB12_ATHB12_ArabidopsisPBM_rc (ATHB12:ATHB12:ArabidopsisPBM_rc); m=80/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 205; ------cCAATcAtta ; cor=0.725; Ncor=0.725; logoDP=3.650; NsEucl=0.891; NSW=0.882; rcor=342; rNcor=45; rlogoDP=256; rNsEucl=158; rNSW=224; rank_mean=205.000; match_rank= a 0 0 0 0 0 0 6 9 94 96 1 12 93 23 12 36 c 0 0 0 0 0 0 56 77 2 2 1 63 1 5 11 24 g 0 0 0 0 0 0 14 2 1 1 1 20 4 5 19 18 t 0 0 0 0 0 0 24 12 3 1 97 5 2 67 58 22
estExt_gwp_gw1.C_70211_M1195_1.02_CISBP_rc_shift6 (estExt_gwp_gw1.C_70211:M1195_1.02:CISBP_rc)	0.714	0.714	2.860	0.893	0.885	382	53	282	145	207	213.800		; 1_m6_assembly_6 versus estExt_gwp_gw1.C_70211_M1195_1.02_CISBP_rc (estExt_gwp_gw1.C_70211:M1195_1.02:CISBP_rc); m=81/128; ncol2=10; w=0; offset=0; strand=R; shift=6; score= 213.8; ------csmaTkATtr ; cor=0.714; Ncor=0.714; logoDP=2.860; NsEucl=0.893; NSW=0.885; rcor=382; rNcor=53; rlogoDP=282; rNsEucl=145; rNSW=207; rank_mean=213.800; match_rank= a 0 0 0 0 0 0 20 21 36 60 0 18 100 0 0 28 c 0 0 0 0 0 0 33 30 31 13 7 18 0 0 16 11 g 0 0 0 0 0 0 24 26 11 14 0 33 0 11 18 45 t 0 0 0 0 0 0 23 23 22 13 93 31 0 89 66 16
AHL25_AHL25_3_ArabidopsisPBM_shift6 (AHL25:AHL25_3:ArabidopsisPBM)	0.705	0.705	4.112	0.891	0.881	427	57	229	161	230	220.800		; 1_m6_assembly_6 versus AHL25_AHL25_3_ArabidopsisPBM (AHL25:AHL25_3:ArabidopsisPBM); m=82/128; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 220.8; ------waWwWwAwTw ; cor=0.705; Ncor=0.705; logoDP=4.112; NsEucl=0.891; NSW=0.881; rcor=427; rNcor=57; rlogoDP=229; rNsEucl=161; rNSW=230; rank_mean=220.800; match_rank= a 0 0 0 0 0 0 37 54 74 39 29 49 83 38 8 28 c 0 0 0 0 0 0 18 9 0 0 0 0 0 0 3 9 g 0 0 0 0 0 0 16 15 1 0 0 0 1 0 6 7 t 0 0 0 0 0 0 29 22 25 61 71 51 16 62 83 56
AL3G51890.t2_HOMEOBOX_1_AT2G18550_EEAD0587_EEADannot_shift6 (AL3G51890.t2_HOMEOBOX_1_AT2G18550:EEAD0587:EEADannot)	0.742	0.571	9.836	0.883	0.863	288	206	27	244	340	221.000		; 1_m6_assembly_6 versus AL3G51890.t2_HOMEOBOX_1_AT2G18550_EEAD0587_EEADannot (AL3G51890.t2_HOMEOBOX_1_AT2G18550:EEAD0587:EEADannot); m=83/128; ncol2=13; w=0; offset=0; strand=D; shift=6; score= 221; ------hCAATwATTG ; cor=0.742; Ncor=0.571; logoDP=9.836; NsEucl=0.883; NSW=0.863; rcor=288; rNcor=206; rlogoDP=27; rNsEucl=244; rNSW=340; rank_mean=221.000; match_rank= a 0 0 0 0 0 0 34 15 97 100 0 45 100 0 0 2 c 0 0 0 0 0 0 38 78 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 2 1 0 0 0 2 0 0 0 95 t 0 0 0 0 0 0 26 6 3 0 100 53 0 100 100 3
HAT22_MA1210.1_JASPAR_shift5 (HAT22:MA1210.1:JASPAR)	0.740	0.605	9.067	0.877	0.863	297	152	45	282	339	223.000		; 1_m6_assembly_6 versus HAT22_MA1210.1_JASPAR (HAT22:MA1210.1:JASPAR); m=84/128; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score= 223; -----myyAATCATT- ; cor=0.740; Ncor=0.605; logoDP=9.067; NsEucl=0.877; NSW=0.863; rcor=297; rNcor=152; rlogoDP=45; rNsEucl=282; rNSW=339; rank_mean=223.000; match_rank= a 0 0 0 0 0 53 27 4 131 132 0 0 131 1 17 0 c 0 0 0 0 0 36 47 58 1 0 2 127 1 2 10 0 g 0 0 0 0 0 21 17 0 0 0 0 5 0 1 14 0 t 0 0 0 0 0 22 41 70 0 0 130 0 0 128 91 0
ATHB-5_MA0110.2_JASPAR_rc_shift7 (ATHB-5:MA0110.2:JASPAR_rc)	0.797	0.513	1.114	0.888	0.887	146	275	325	196	198	228.000		; 1_m6_assembly_6 versus ATHB-5_MA0110.2_JASPAR_rc (ATHB-5:MA0110.2:JASPAR_rc); m=85/128; ncol2=13; w=0; offset=1; strand=R; shift=7; score= 228; -------CAATaATTG ; cor=0.797; Ncor=0.513; logoDP=1.114; NsEucl=0.888; NSW=0.887; rcor=146; rNcor=275; rlogoDP=325; rNsEucl=196; rNSW=198; rank_mean=228.000; match_rank= a 0 0 0 0 0 0 0 1 39 39 0 22 39 0 1 3 c 0 0 0 0 0 0 0 7 0 0 0 7 0 0 0 4 g 0 0 0 0 0 0 0 0 0 0 0 8 0 0 6 32 t 0 0 0 0 0 0 0 0 0 0 39 2 0 39 32 0
ATHB-23_MA1327.3_JASPAR_shift10 (ATHB-23:MA1327.3:JASPAR)	0.820	0.447	6.290	0.864	0.890	100	367	135	371	182	231.000		; 1_m6_assembly_6 versus ATHB-23_MA1327.3_JASPAR (ATHB-23:MA1327.3:JASPAR); m=86/128; ncol2=7; w=0; offset=4; strand=D; shift=10; score= 231; ----------tAATTA ; cor=0.820; Ncor=0.447; logoDP=6.290; NsEucl=0.864; NSW=0.890; rcor=100; rNcor=367; rlogoDP=135; rNsEucl=371; rNSW=182; rank_mean=231.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 466 2432 2432 0 0 2432 c 0 0 0 0 0 0 0 0 0 0 226 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 103 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1637 0 0 2432 2432 0
HAT1.DAP_M0444_AthalianaCistrome_rc_shift2 (HAT1.DAP:M0444:AthalianaCistrome_rc)	0.750	0.500	4.474	0.889	0.878	259	290	204	169	246	233.600		; 1_m6_assembly_6 versus HAT1.DAP_M0444_AthalianaCistrome_rc (HAT1.DAP:M0444:AthalianaCistrome_rc); m=87/128; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score= 233.6; --wtwwyyAATCATTr ; cor=0.750; Ncor=0.500; logoDP=4.474; NsEucl=0.889; NSW=0.878; rcor=259; rNcor=290; rlogoDP=204; rNsEucl=169; rNSW=246; rank_mean=233.600; match_rank= a 0 0 97 48 89 101 42 0 218 218 0 13 218 0 34 85 c 0 0 22 33 16 28 80 113 0 0 0 191 0 0 0 19 g 0 0 11 24 23 31 40 0 0 0 0 14 0 0 1 62 t 0 0 88 113 90 58 56 105 0 0 218 0 0 218 183 52
HB68_GT1_Mo17_1_EEAD0410_EEADannot_rc_shift6 (HB68_GT1_Mo17_1:EEAD0410:EEADannot_rc)	0.748	0.534	6.834	0.885	0.867	269	247	125	219	316	235.200		; 1_m6_assembly_6 versus HB68_GT1_Mo17_1_EEAD0410_EEADannot_rc (HB68_GT1_Mo17_1:EEAD0410:EEADannot_rc); m=88/128; ncol2=14; w=0; offset=0; strand=R; shift=6; score= 235.2; ------hCAATwATTG ; cor=0.748; Ncor=0.534; logoDP=6.834; NsEucl=0.885; NSW=0.867; rcor=269; rNcor=247; rlogoDP=125; rNsEucl=219; rNSW=316; rank_mean=235.200; match_rank= a 0 0 0 0 0 0 28 10 90 100 0 54 100 0 0 1 c 0 0 0 0 0 0 38 80 1 0 0 4 0 0 0 0 g 0 0 0 0 0 0 9 1 3 0 0 2 0 0 0 98 t 0 0 0 0 0 0 25 9 6 0 100 40 0 100 100 1
AHL13_MA2374.1_JASPAR_shift7 (AHL13:MA2374.1:JASPAR)	0.751	0.601	5.507	0.874	0.873	255	159	171	309	287	236.200		; 1_m6_assembly_6 versus AHL13_MA2374.1_JASPAR (AHL13:MA2374.1:JASPAR); m=89/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 236.2; -------AWWTAWWt- ; cor=0.751; Ncor=0.601; logoDP=5.507; NsEucl=0.874; NSW=0.873; rcor=255; rNcor=159; rlogoDP=171; rNsEucl=309; rNSW=287; rank_mean=236.200; match_rank= a 0 0 0 0 0 0 0 831 292 701 0 802 686 297 213 0 c 0 0 0 0 0 0 0 24 0 0 0 0 0 0 97 0 g 0 0 0 0 0 0 0 24 0 0 0 0 0 0 97 0 t 0 0 0 0 0 0 0 119 706 297 999 197 312 701 592 0
HAT1.ampDAP_M0445_AthalianaCistrome_rc_shift6 (HAT1.ampDAP:M0445:AthalianaCistrome_rc)	0.709	0.645	9.094	0.879	0.853	407	100	43	268	381	239.800		; 1_m6_assembly_6 versus HAT1.ampDAP_M0445_AthalianaCistrome_rc (HAT1.ampDAP:M0445:AthalianaCistrome_rc); m=90/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 239.8; ------yyAATCATTr ; cor=0.709; Ncor=0.645; logoDP=9.094; NsEucl=0.879; NSW=0.853; rcor=407; rNcor=100; rlogoDP=43; rNsEucl=268; rNSW=381; rank_mean=239.800; match_rank= a 0 0 0 0 0 0 21 1 129 130 0 0 130 0 11 43 c 0 0 0 0 0 0 40 63 1 0 0 129 0 0 0 10 g 0 0 0 0 0 0 26 0 0 0 0 0 0 0 1 54 t 0 0 0 0 0 0 43 66 0 0 130 1 0 130 118 23
TRANSCRIPTION_1qnc_B_3D-footprint_rc_shift8 (TRANSCRIPTION:1qnc_B:3D-footprint_rc)	0.790	0.632	0.191	0.876	0.878	158	119	394	287	245	240.600		; 1_m6_assembly_6 versus TRANSCRIPTION_1qnc_B_3D-footprint_rc (TRANSCRIPTION:1qnc_B:3D-footprint_rc); m=91/128; ncol2=8; w=0; offset=2; strand=R; shift=8; score= 240.6; --------AATAAmAs ; cor=0.790; Ncor=0.632; logoDP=0.191; NsEucl=0.876; NSW=0.878; rcor=158; rNcor=119; rlogoDP=394; rNsEucl=287; rNSW=245; rank_mean=240.600; match_rank= a 0 0 0 0 0 0 0 0 96 96 0 96 96 43 96 13 c 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 27 g 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 54 t 0 0 0 0 0 0 0 0 0 0 96 0 0 13 0 2
AHL20_AHL20_3_ArabidopsisPBM_rc_shift5 (AHL20:AHL20_3:ArabidopsisPBM_rc)	0.731	0.598	3.863	0.884	0.879	332	165	248	226	236	241.400		; 1_m6_assembly_6 versus AHL20_AHL20_3_ArabidopsisPBM_rc (AHL20:AHL20_3:ArabidopsisPBM_rc); m=92/128; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score= 241.4; -----tAwwWWwwTa- ; cor=0.731; Ncor=0.598; logoDP=3.863; NsEucl=0.884; NSW=0.879; rcor=332; rNcor=165; rlogoDP=248; rNsEucl=226; rNSW=236; rank_mean=241.400; match_rank= a 0 0 0 0 0 19 89 40 37 69 28 61 58 3 42 0 c 0 0 0 0 0 11 5 1 1 3 0 1 1 3 21 0 g 0 0 0 0 0 22 3 1 1 0 2 1 1 5 20 0 t 0 0 0 0 0 48 3 58 61 28 70 37 40 89 17 0
ATHB-15_MA1026.3_JASPAR_shift3 (ATHB-15:MA1026.3:JASPAR)	0.721	0.555	9.015	0.882	0.860	352	218	49	252	351	244.400		; 1_m6_assembly_6 versus ATHB-15_MA1026.3_JASPAR (ATHB-15:MA1026.3:JASPAR); m=93/128; ncol2=13; w=-3; offset=-3; strand=D; shift=3; score= 244.4; ---awwrTAATGATkA ; cor=0.721; Ncor=0.555; logoDP=9.015; NsEucl=0.882; NSW=0.860; rcor=352; rNcor=218; rlogoDP=49; rNsEucl=252; rNSW=351; rank_mean=244.400; match_rank= a 0 0 0 363 268 212 199 13 518 590 0 27 590 0 10 494 c 0 0 0 31 35 63 46 97 1 0 0 82 0 0 0 1 g 0 0 0 84 60 131 329 0 68 0 0 462 0 0 218 87 t 0 0 0 112 227 184 16 480 3 0 590 19 0 590 362 8
ATHB-12_MA0950.1_JASPAR_rc_shift7 (ATHB-12:MA0950.1:JASPAR_rc)	0.759	0.608	3.608	0.874	0.874	231	149	257	305	284	245.200		; 1_m6_assembly_6 versus ATHB-12_MA0950.1_JASPAR_rc (ATHB-12:MA0950.1:JASPAR_rc); m=94/128; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 245.2; -------CAATcAtt- ; cor=0.759; Ncor=0.608; logoDP=3.608; NsEucl=0.874; NSW=0.874; rcor=231; rNcor=149; rlogoDP=257; rNsEucl=305; rNSW=284; rank_mean=245.200; match_rank= a 0 0 0 0 0 0 0 88 940 966 13 118 941 233 124 0 c 0 0 0 0 0 0 0 766 19 17 15 633 6 53 107 0 g 0 0 0 0 0 0 0 18 10 8 7 201 35 46 191 0 t 0 0 0 0 0 0 0 128 30 9 965 48 18 668 579 0
ATHB-7_MA0954.3_JASPAR_rc_shift6 (ATHB-7:MA0954.3:JASPAR_rc)	0.709	0.644	7.998	0.879	0.853	410	102	80	266	379	247.400		; 1_m6_assembly_6 versus ATHB-7_MA0954.3_JASPAR_rc (ATHB-7:MA0954.3:JASPAR_rc); m=95/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 247.4; ------yCAATCATTg ; cor=0.709; Ncor=0.644; logoDP=7.998; NsEucl=0.879; NSW=0.853; rcor=410; rNcor=102; rlogoDP=80; rNsEucl=266; rNSW=379; rank_mean=247.400; match_rank= a 0 0 0 0 0 0 49 9 598 600 0 132 598 37 54 66 c 0 0 0 0 0 0 181 551 2 0 0 464 1 0 11 92 g 0 0 0 0 0 0 46 3 0 0 0 2 1 3 62 389 t 0 0 0 0 0 0 324 37 0 0 600 2 0 560 473 53
ANL2_M0850_1.02_CISBP_rc_shift6 (ANL2:M0850_1.02:CISBP_rc)	0.704	0.640	6.143	0.884	0.865	431	105	147	228	328	247.800		; 1_m6_assembly_6 versus ANL2_M0850_1.02_CISBP_rc (ANL2:M0850_1.02:CISBP_rc); m=96/128; ncol2=11; w=0; offset=0; strand=R; shift=6; score= 247.8; ------kCATTWATta ; cor=0.704; Ncor=0.640; logoDP=6.143; NsEucl=0.884; NSW=0.865; rcor=431; rNcor=105; rlogoDP=147; rNsEucl=228; rNSW=328; rank_mean=247.800; match_rank= a 0 0 0 0 0 0 19 8 94 8 0 74 100 8 6 50 c 0 0 0 0 0 0 19 75 2 0 0 0 0 0 6 17 g 0 0 0 0 0 0 30 8 2 0 0 0 0 0 21 17 t 0 0 0 0 0 0 32 9 2 92 100 26 0 92 67 16
ZHD1_MA1329.3_JASPAR_shift8 (ZHD1:MA1329.3:JASPAR)	0.762	0.554	7.348	0.869	0.864	223	221	115	345	338	248.400		; 1_m6_assembly_6 versus ZHD1_MA1329.3_JASPAR (ZHD1:MA1329.3:JASPAR); m=97/128; ncol2=9; w=0; offset=2; strand=D; shift=8; score= 248.4; --------AyTAATTA ; cor=0.762; Ncor=0.554; logoDP=7.348; NsEucl=0.869; NSW=0.864; rcor=223; rNcor=221; rlogoDP=115; rNsEucl=345; rNSW=338; rank_mean=248.400; match_rank= a 0 0 0 0 0 0 0 0 1813 386 47 2412 2417 25 19 2382 c 0 0 0 0 0 0 0 0 246 1155 24 14 15 29 43 14 g 0 0 0 0 0 0 0 0 193 193 9 26 18 9 12 25 t 0 0 0 0 0 0 0 0 220 738 2392 20 22 2409 2398 51
HAT1_MA1024.2_JASPAR_shift7 (HAT1:MA1024.2:JASPAR)	0.743	0.595	9.032	0.864	0.853	284	168	47	370	378	249.400		; 1_m6_assembly_6 versus HAT1_MA1024.2_JASPAR (HAT1:MA1024.2:JASPAR); m=98/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 249.4; -------yAATCATk- ; cor=0.743; Ncor=0.595; logoDP=9.032; NsEucl=0.864; NSW=0.853; rcor=284; rNcor=168; rlogoDP=47; rNsEucl=370; rNSW=378; rank_mean=249.400; match_rank= a 0 0 0 0 0 0 0 69 1000 1000 0 0 1000 98 101 0 c 0 0 0 0 0 0 0 506 0 0 0 1000 0 0 101 0 g 0 0 0 0 0 0 0 69 0 0 0 0 0 0 286 0 t 0 0 0 0 0 0 0 356 0 0 1000 0 0 902 512 0
ZAT6_UN0381.1_JASPAR_rc_shift5 (ZAT6:UN0381.1:JASPAR_rc)	0.718	0.599	4.391	0.886	0.870	362	164	212	212	306	251.200		; 1_m6_assembly_6 versus ZAT6_UN0381.1_JASPAR_rc (ZAT6:UN0381.1:JASPAR_rc); m=99/128; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score= 251.2; -----wwCAATCATTw ; cor=0.718; Ncor=0.599; logoDP=4.391; NsEucl=0.886; NSW=0.870; rcor=362; rNcor=164; rlogoDP=212; rNsEucl=212; rNSW=306; rank_mean=251.200; match_rank= a 0 0 0 0 0 3205 2318 1077 8080 8084 182 317 8247 575 647 2681 c 0 0 0 0 0 1611 1824 5912 213 173 82 7885 45 164 310 1459 g 0 0 0 0 0 1165 1175 410 77 37 56 40 82 170 393 1840 t 0 0 0 0 0 2603 3267 1185 214 290 8264 342 210 7675 7234 2604
HAT2_MA1198.2_JASPAR_shift7 (HAT2:MA1198.2:JASPAR)	0.742	0.594	8.604	0.865	0.853	289	171	66	369	376	254.200		; 1_m6_assembly_6 versus HAT2_MA1198.2_JASPAR (HAT2:MA1198.2:JASPAR); m=100/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 254.2; -------yAATCATt- ; cor=0.742; Ncor=0.594; logoDP=8.604; NsEucl=0.865; NSW=0.853; rcor=289; rNcor=171; rlogoDP=66; rNsEucl=369; rNSW=376; rank_mean=254.200; match_rank= a 0 0 0 0 0 0 0 0 598 598 0 0 598 113 114 0 c 0 0 0 0 0 0 0 249 0 0 0 541 0 12 42 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 t 0 0 0 0 0 0 0 349 0 0 598 57 0 473 406 0
ATHB5_ATHB5_Athamap_rc_shift7 (ATHB5:ATHB5:Athamap_rc)	0.781	0.502	1.114	0.882	0.875	173	286	325	249	268	260.200		; 1_m6_assembly_6 versus ATHB5_ATHB5_Athamap_rc (ATHB5:ATHB5:Athamap_rc); m=101/128; ncol2=13; w=0; offset=1; strand=R; shift=7; score= 260.2; -------CAATaATTG ; cor=0.781; Ncor=0.502; logoDP=1.114; NsEucl=0.882; NSW=0.875; rcor=173; rNcor=286; rlogoDP=325; rNsEucl=249; rNSW=268; rank_mean=260.200; match_rank= a 0 0 0 0 0 0 0 1 39 39 0 22 39 0 1 3 c 0 0 0 0 0 0 0 38 0 0 0 7 0 0 0 4 g 0 0 0 0 0 0 0 0 0 0 0 8 0 0 6 32 t 0 0 0 0 0 0 0 0 0 0 39 2 0 39 32 0
ATHB15_MA1026.2_JASPAR_shift2 (ATHB15:MA1026.2:JASPAR)	0.721	0.481	9.015	0.882	0.860	352	310	49	252	351	262.800		; 1_m6_assembly_6 versus ATHB15_MA1026.2_JASPAR (ATHB15:MA1026.2:JASPAR); m=102/128; ncol2=15; w=-4; offset=-4; strand=D; shift=2; score= 262.8; --rawwrTAATGATkA ; cor=0.721; Ncor=0.481; logoDP=9.015; NsEucl=0.882; NSW=0.860; rcor=352; rNcor=310; rlogoDP=49; rNsEucl=252; rNSW=351; rank_mean=262.800; match_rank= a 0 0 265 363 268 212 199 13 518 590 0 27 590 0 10 494 c 0 0 43 31 35 63 46 97 1 0 0 82 0 0 0 1 g 0 0 158 84 60 131 329 0 68 0 0 462 0 0 218 87 t 0 0 124 112 227 184 16 480 3 0 590 19 0 590 362 8
ATHB6.DAP_M0430_AthalianaCistrome_rc_shift5 (ATHB6.DAP:M0430:AthalianaCistrome_rc)	0.715	0.650	0.299	0.887	0.873	378	93	366	200	295	266.400		; 1_m6_assembly_6 versus ATHB6.DAP_M0430_AthalianaCistrome_rc (ATHB6.DAP:M0430:AthalianaCistrome_rc); m=103/128; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score= 266.4; -----rwdaATkATTr ; cor=0.715; Ncor=0.650; logoDP=0.299; NsEucl=0.887; NSW=0.873; rcor=378; rNcor=93; rlogoDP=366; rNsEucl=200; rNSW=295; rank_mean=266.400; match_rank= a 0 0 0 0 0 191 193 172 305 585 0 45 600 0 0 241 c 0 0 0 0 0 121 87 110 149 6 0 65 0 0 0 0 g 0 0 0 0 0 151 80 152 34 0 0 309 0 0 19 347 t 0 0 0 0 0 137 240 166 112 9 600 181 0 600 581 12
ATHB-5_MA0110.4_JASPAR_shift7 (ATHB-5:MA0110.4:JASPAR)	0.738	0.591	7.543	0.864	0.852	304	177	106	372	383	268.400		; 1_m6_assembly_6 versus ATHB-5_MA0110.4_JASPAR (ATHB-5:MA0110.4:JASPAR); m=104/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 268.4; -------CAATCATT- ; cor=0.738; Ncor=0.591; logoDP=7.543; NsEucl=0.864; NSW=0.852; rcor=304; rNcor=177; rlogoDP=106; rNsEucl=372; rNSW=383; rank_mean=268.400; match_rank= a 0 0 0 0 0 0 0 1051 9632 9563 230 841 9809 648 633 0 c 0 0 0 0 0 0 0 7517 197 154 98 8049 48 178 312 0 g 0 0 0 0 0 0 0 386 74 50 59 254 51 175 394 0 t 0 0 0 0 0 0 0 1168 219 355 9735 978 214 9121 8783 0
AHL12_MA0932.1_JASPAR_shift7 (AHL12:MA0932.1:JASPAR)	0.737	0.590	4.020	0.872	0.869	310	180	235	321	307	270.600		; 1_m6_assembly_6 versus AHL12_MA0932.1_JASPAR (AHL12:MA0932.1:JASPAR); m=105/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 270.6; -------AAwwwwTT- ; cor=0.737; Ncor=0.590; logoDP=4.020; NsEucl=0.872; NSW=0.869; rcor=310; rNcor=180; rlogoDP=235; rNsEucl=321; rNSW=307; rank_mean=270.600; match_rank= a 0 0 0 0 0 0 0 772 843 484 332 660 497 98 64 0 c 0 0 0 0 0 0 0 18 35 14 6 3 5 24 146 0 g 0 0 0 0 0 0 0 146 24 5 3 6 14 35 18 0 t 0 0 0 0 0 0 0 64 98 497 660 332 484 843 772 0
ATHB-5_MA0110.1_JASPAR_shift6 (ATHB-5:MA0110.1:JASPAR)	0.703	0.633	8.695	0.868	0.844	435	116	64	351	404	274.000		; 1_m6_assembly_6 versus ATHB-5_MA0110.1_JASPAR (ATHB-5:MA0110.1:JASPAR); m=106/128; ncol2=9; w=0; offset=0; strand=D; shift=6; score= 274; ------cCAATkATT- ; cor=0.703; Ncor=0.633; logoDP=8.695; NsEucl=0.868; NSW=0.844; rcor=435; rNcor=116; rlogoDP=64; rNsEucl=351; rNSW=404; rank_mean=274.000; match_rank= a 0 0 0 0 0 0 3 1 30 37 0 2 37 0 0 0 c 0 0 0 0 0 0 19 29 6 0 0 5 0 0 0 0 g 0 0 0 0 0 0 9 4 0 0 0 10 0 0 0 0 t 0 0 0 0 0 0 6 3 1 0 37 20 0 37 37 0
ATHB25_MA1329.1_JASPAR_shift6 (ATHB25:MA1329.1:JASPAR)	0.707	0.472	7.806	0.884	0.866	416	329	86	224	323	275.600		; 1_m6_assembly_6 versus ATHB25_MA1329.1_JASPAR (ATHB25:MA1329.1:JASPAR); m=107/128; ncol2=15; w=0; offset=0; strand=D; shift=6; score= 275.6; ------tmayTAATyA ; cor=0.707; Ncor=0.472; logoDP=7.806; NsEucl=0.884; NSW=0.866; rcor=416; rNcor=329; rlogoDP=86; rNsEucl=224; rNSW=323; rank_mean=275.600; match_rank= a 0 0 0 0 0 0 148 213 320 9 0 600 600 0 0 581 c 0 0 0 0 0 0 109 183 115 259 0 0 0 6 166 8 g 0 0 0 0 0 0 43 73 132 8 0 0 0 3 28 9 t 0 0 0 0 0 0 300 131 33 324 600 0 0 591 406 2
PHV.DAP_M0416_AthalianaCistrome_rc_shift2 (PHV.DAP:M0416:AthalianaCistrome_rc)	0.736	0.491	4.279	0.885	0.867	315	301	222	223	319	276.000		; 1_m6_assembly_6 versus PHV.DAP_M0416_AthalianaCistrome_rc (PHV.DAP:M0416:AthalianaCistrome_rc); m=108/128; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score= 276; --rawwrTAATGATkA ; cor=0.736; Ncor=0.491; logoDP=4.279; NsEucl=0.885; NSW=0.867; rcor=315; rNcor=301; rlogoDP=222; rNsEucl=223; rNSW=319; rank_mean=276.000; match_rank= a 0 0 270 374 286 250 214 25 537 598 0 54 598 0 4 511 c 0 0 45 39 44 45 59 76 16 0 0 56 0 0 0 4 g 0 0 153 71 55 130 304 1 45 0 0 455 0 0 195 83 t 0 0 130 114 213 173 21 496 0 0 598 33 0 598 399 0
At1g76110.ampDAP_M0145_AthalianaCistrome_rc_shift3 (At1g76110.ampDAP:M0145:AthalianaCistrome_rc)	0.716	0.477	0.671	0.892	0.882	373	317	338	155	221	280.800		; 1_m6_assembly_6 versus At1g76110.ampDAP_M0145_AthalianaCistrome_rc (At1g76110.ampDAP:M0145:AthalianaCistrome_rc); m=109/128; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score= 280.8; ---aATTwAATtwtwa ; cor=0.716; Ncor=0.477; logoDP=0.671; NsEucl=0.892; NSW=0.882; rcor=373; rNcor=317; rlogoDP=338; rNsEucl=155; rNSW=221; rank_mean=280.800; match_rank= a 0 0 0 192 387 0 0 193 336 374 21 92 178 53 117 260 c 0 0 0 58 0 0 36 22 28 9 23 71 47 52 29 48 g 0 0 0 42 0 0 0 0 23 0 10 92 30 30 17 43 t 0 0 0 95 0 387 351 172 0 4 333 132 132 252 224 36
YAB5_UN0416.2_JASPAR_rc_shift6 (YAB5:UN0416.2:JASPAR_rc)	0.734	0.587	4.221	0.870	0.865	321	187	225	341	331	281.000		; 1_m6_assembly_6 versus YAB5_UN0416.2_JASPAR_rc (YAB5:UN0416.2:JASPAR_rc); m=110/128; ncol2=8; w=0; offset=0; strand=R; shift=6; score= 281; ------wTAATtAT-- ; cor=0.734; Ncor=0.587; logoDP=4.221; NsEucl=0.870; NSW=0.865; rcor=321; rNcor=187; rlogoDP=225; rNsEucl=341; rNSW=331; rank_mean=281.000; match_rank= a 0 0 0 0 0 0 447 0 904 809 0 26 752 78 0 0 c 0 0 0 0 0 0 153 0 0 96 0 227 51 78 0 0 g 0 0 0 0 0 0 52 94 0 0 96 121 51 78 0 0 t 0 0 0 0 0 0 348 905 95 94 903 625 147 765 0 0
KAN2.ampDAP_M0396_AthalianaCistrome_shift4 (KAN2.ampDAP:M0396:AthalianaCistrome)	0.707	0.530	8.128	0.870	0.849	418	255	78	339	389	295.800		; 1_m6_assembly_6 versus KAN2.ampDAP_M0396_AthalianaCistrome (KAN2.ampDAP:M0396:AthalianaCistrome); m=111/128; ncol2=11; w=-2; offset=-2; strand=D; shift=4; score= 295.8; ----arrGAATAWtc- ; cor=0.707; Ncor=0.530; logoDP=8.128; NsEucl=0.870; NSW=0.849; rcor=418; rNcor=255; rlogoDP=78; rNsEucl=339; rNSW=389; rank_mean=295.800; match_rank= a 0 0 0 0 297 311 346 0 556 557 0 542 145 111 102 0 c 0 0 0 0 63 18 2 0 0 0 1 0 0 19 285 0 g 0 0 0 0 98 177 209 557 0 0 0 15 0 68 90 0 t 0 0 0 0 99 51 0 0 1 0 556 0 412 359 80 0
ATHB24_MA1330.1_JASPAR_shift5 (ATHB24:MA1330.1:JASPAR)	0.702	0.468	6.039	0.884	0.866	446	336	151	225	324	296.400		; 1_m6_assembly_6 versus ATHB24_MA1330.1_JASPAR (ATHB24:MA1330.1:JASPAR); m=112/128; ncol2=15; w=-1; offset=-1; strand=D; shift=5; score= 296.4; -----wawhrTRATTA ; cor=0.702; Ncor=0.468; logoDP=6.039; NsEucl=0.884; NSW=0.866; rcor=446; rNcor=336; rlogoDP=151; rNsEucl=225; rNSW=324; rank_mean=296.400; match_rank= a 0 0 0 0 0 368 357 260 179 217 12 411 585 0 0 598 c 0 0 0 0 0 45 63 76 153 35 13 14 0 0 0 0 g 0 0 0 0 0 29 54 88 76 242 2 175 13 0 0 2 t 0 0 0 0 0 158 126 176 192 106 573 0 2 600 600 0
REV_MA2344.1_JASPAR_rc_shift4 (REV:MA2344.1:JASPAR_rc)	0.714	0.510	3.808	0.882	0.860	386	277	253	254	356	305.200		; 1_m6_assembly_6 versus REV_MA2344.1_JASPAR_rc (REV:MA2344.1:JASPAR_rc); m=113/128; ncol2=14; w=-2; offset=-2; strand=R; shift=4; score= 305.2; ----tAATAATGATkA ; cor=0.714; Ncor=0.510; logoDP=3.808; NsEucl=0.882; NSW=0.860; rcor=386; rNcor=277; rlogoDP=253; rNsEucl=254; rNSW=356; rank_mean=305.200; match_rank= a 0 0 0 0 63 299 313 12 308 369 4 26 373 16 28 296 c 0 0 0 0 26 22 18 8 17 0 3 17 4 9 4 21 g 0 0 0 0 40 27 36 5 39 11 5 318 5 11 194 27 t 0 0 0 0 256 37 18 360 21 5 373 24 3 349 159 41
CRC_UN0396.1_JASPAR_shift7 (CRC:UN0396.1:JASPAR)	0.708	0.567	7.827	0.857	0.836	413	210	83	408	427	308.200		; 1_m6_assembly_6 versus CRC_UN0396.1_JASPAR (CRC:UN0396.1:JASPAR); m=114/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 308.2; -------TwATCATw- ; cor=0.708; Ncor=0.567; logoDP=7.827; NsEucl=0.857; NSW=0.836; rcor=413; rNcor=210; rlogoDP=83; rNsEucl=408; rNSW=427; rank_mean=308.200; match_rank= a 0 0 0 0 0 0 0 35 587 995 28.333 0 1000 0 598 0 c 0 0 0 0 0 0 0 143 48.333 0 0 988 0 0 73.333 0 g 0 0 0 0 0 0 0 80 1.667 0 0 11.667 0 5 60 0 t 0 0 0 0 0 0 0 742 363 5 972 0 0 995 268 0
ZAT6_MA2052.2_JASPAR_rc_shift7 (ZAT6:MA2052.2:JASPAR_rc)	0.720	0.576	4.388	0.859	0.841	355	199	214	396	416	316.000		; 1_m6_assembly_6 versus ZAT6_MA2052.2_JASPAR_rc (ZAT6:MA2052.2:JASPAR_rc); m=115/128; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 316; -------CAATCATT- ; cor=0.720; Ncor=0.576; logoDP=4.388; NsEucl=0.859; NSW=0.841; rcor=355; rNcor=199; rlogoDP=214; rNsEucl=396; rNSW=416; rank_mean=316.000; match_rank= a 0 0 0 0 0 0 0 1077 8080 8084 182 317 8247 575 647 0 c 0 0 0 0 0 0 0 5912 213 173 82 7885 45 164 310 0 g 0 0 0 0 0 0 0 410 77 37 56 40 82 170 393 0 t 0 0 0 0 0 0 0 1185 214 290 8264 342 210 7675 7234 0
ZHD10_MA1807.1_JASPAR_rc_shift7 (ZHD10:MA1807.1:JASPAR_rc)	0.710	0.533	4.003	0.871	0.851	400	248	240	332	385	321.000		; 1_m6_assembly_6 versus ZHD10_MA1807.1_JASPAR_rc (ZHD10:MA1807.1:JASPAR_rc); m=116/128; ncol2=11; w=0; offset=1; strand=R; shift=7; score= 321; -------aayTAATTA ; cor=0.710; Ncor=0.533; logoDP=4.003; NsEucl=0.871; NSW=0.851; rcor=400; rNcor=248; rlogoDP=240; rNsEucl=332; rNSW=385; rank_mean=321.000; match_rank= a 0 0 0 0 0 0 0 371 598 0 0 1000 1000 0 0 972 c 0 0 0 0 0 0 0 245 138 372.34 0 0 0 0 172 0 g 0 0 0 0 0 0 0 160 172 0 0 0 0 0 0 28.369 t 0 0 0 0 0 0 0 225 92.199 627.66 1000 0 0 1000 828 0
ATHB23.ampDAP_M0855_AthalianaCistrome_rc_shift7 (ATHB23.ampDAP:M0855:AthalianaCistrome_rc)	0.710	0.533	4.003	0.871	0.851	401	249	239	333	386	321.600		; 1_m6_assembly_6 versus ATHB23.ampDAP_M0855_AthalianaCistrome_rc (ATHB23.ampDAP:M0855:AthalianaCistrome_rc); m=117/128; ncol2=11; w=0; offset=1; strand=R; shift=7; score= 321.6; -------aayTAATTA ; cor=0.710; Ncor=0.533; logoDP=4.003; NsEucl=0.871; NSW=0.851; rcor=401; rNcor=249; rlogoDP=239; rNsEucl=333; rNSW=386; rank_mean=321.600; match_rank= a 0 0 0 0 0 0 0 209 337 0 0 564 564 0 0 548 c 0 0 0 0 0 0 0 138 78 210 0 0 0 0 97 0 g 0 0 0 0 0 0 0 90 97 0 0 0 0 0 0 16 t 0 0 0 0 0 0 0 127 52 354 564 0 0 564 467 0
ZIM2_B73_1_m1_EEAD0558_EEADannot_rc_shift3 (ZIM2_B73_1_m1:EEAD0558:EEADannot_rc)	0.739	0.493	2.043	0.874	0.842	302	296	296	307	411	322.400		; 1_m6_assembly_6 versus ZIM2_B73_1_m1_EEAD0558_EEADannot_rc (ZIM2_B73_1_m1:EEAD0558:EEADannot_rc); m=118/128; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score= 322.4; ---GTCCARATAATCT ; cor=0.739; Ncor=0.493; logoDP=2.043; NsEucl=0.874; NSW=0.842; rcor=302; rNcor=296; rlogoDP=296; rNsEucl=307; rNSW=411; rank_mean=322.400; match_rank= a 0 0 0 11 0 0 0 100 75 98 0 100 99 0 1 1 c 0 0 0 0 1 99 98 0 0 0 1 0 0 1 98 5 g 0 0 0 68 0 0 0 0 25 2 0 0 0 0 0 0 t 0 0 0 21 99 1 2 0 0 0 99 0 1 99 1 94
ATHB25.ampDAP_M0853_AthalianaCistrome_rc_shift7 (ATHB25.ampDAP:M0853:AthalianaCistrome_rc)	0.704	0.528	3.868	0.873	0.854	433	256	246	318	372	325.000		; 1_m6_assembly_6 versus ATHB25.ampDAP_M0853_AthalianaCistrome_rc (ATHB25.ampDAP:M0853:AthalianaCistrome_rc); m=119/128; ncol2=11; w=0; offset=1; strand=R; shift=7; score= 325; -------yryTAATyA ; cor=0.704; Ncor=0.528; logoDP=3.868; NsEucl=0.873; NSW=0.854; rcor=433; rNcor=256; rlogoDP=246; rNsEucl=318; rNSW=372; rank_mean=325.000; match_rank= a 0 0 0 0 0 0 0 131 258 31 0 597 597 0 0 573 c 0 0 0 0 0 0 0 203 149 237 0 0 0 1 174 0 g 0 0 0 0 0 0 0 95 178 9 0 0 0 3 42 24 t 0 0 0 0 0 0 0 168 12 320 597 0 0 593 381 0
ZHD5_MA1326.2_JASPAR_rc_shift9 (ZHD5:MA1326.2:JASPAR_rc)	0.727	0.463	5.863	0.852	0.847	338	341	159	421	397	331.200		; 1_m6_assembly_6 versus ZHD5_MA1326.2_JASPAR_rc (ZHD5:MA1326.2:JASPAR_rc); m=120/128; ncol2=8; w=0; offset=3; strand=R; shift=9; score= 331.2; ---------yTAATyA ; cor=0.727; Ncor=0.463; logoDP=5.863; NsEucl=0.852; NSW=0.847; rcor=338; rNcor=341; rlogoDP=159; rNsEucl=421; rNSW=397; rank_mean=331.200; match_rank= a 0 0 0 0 0 0 0 0 0 9 1 600 600 0 0 576 c 0 0 0 0 0 0 0 0 0 237 0 0 0 6 194 2 g 0 0 0 0 0 0 0 0 0 19 0 0 0 3 90 22 t 0 0 0 0 0 0 0 0 0 335 599 0 0 591 316 0
LOC_Os02g57820_M0137_1.02_CISBP_shift7 (LOC_Os02g57820:M0137_1.02:CISBP)	0.718	0.574	1.728	0.861	0.844	363	201	305	391	402	332.400		; 1_m6_assembly_6 versus LOC_Os02g57820_M0137_1.02_CISBP (LOC_Os02g57820:M0137_1.02:CISBP); m=121/128; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 332.4; -------awwwAwww- ; cor=0.718; Ncor=0.574; logoDP=1.728; NsEucl=0.861; NSW=0.844; rcor=363; rNcor=201; rlogoDP=305; rNsEucl=391; rNSW=402; rank_mean=332.400; match_rank= a 0 0 0 0 0 0 0 41 38 41 44 81 51 34 31 0 c 0 0 0 0 0 0 0 18 15 4 12 0 0 8 19 0 g 0 0 0 0 0 0 0 21 19 19 5 8 7 6 15 0 t 0 0 0 0 0 0 0 20 28 36 39 11 42 52 35 0
CRC.DAP_M0300_AthalianaCistrome_rc_shift7 (CRC.DAP:M0300:AthalianaCistrome_rc)	0.708	0.567	4.047	0.857	0.836	414	211	233	409	428	339.000		; 1_m6_assembly_6 versus CRC.DAP_M0300_AthalianaCistrome_rc (CRC.DAP:M0300:AthalianaCistrome_rc); m=122/128; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 339; -------TwATCATw- ; cor=0.708; Ncor=0.567; logoDP=4.047; NsEucl=0.857; NSW=0.836; rcor=414; rNcor=211; rlogoDP=233; rNsEucl=409; rNSW=428; rank_mean=339.000; match_rank= a 0 0 0 0 0 0 0 21 352 597 17 0 600 0 359 0 c 0 0 0 0 0 0 0 86 29 0 0 593 0 0 44 0 g 0 0 0 0 0 0 0 48 1 0 0 7 0 3 36 0 t 0 0 0 0 0 0 0 445 218 3 583 0 0 597 161 0
Os02g0706600_M1116_1.02_CISBP_shift8 (Os02g0706600:M1116_1.02:CISBP)	0.736	0.491	1.585	0.862	0.847	312	298	310	384	396	340.000		; 1_m6_assembly_6 versus Os02g0706600_M1116_1.02_CISBP (Os02g0706600:M1116_1.02:CISBP); m=123/128; ncol2=10; w=0; offset=2; strand=D; shift=8; score= 340; --------vyTAAtym ; cor=0.736; Ncor=0.491; logoDP=1.585; NsEucl=0.862; NSW=0.847; rcor=312; rNcor=298; rlogoDP=310; rNsEucl=384; rNSW=396; rank_mean=340.000; match_rank= a 0 0 0 0 0 0 0 0 25 21 19 69 75 15 18 31 c 0 0 0 0 0 0 0 0 28 32 11 7 12 20 38 25 g 0 0 0 0 0 0 0 0 26 19 2 14 4 15 19 22 t 0 0 0 0 0 0 0 0 21 28 68 10 9 50 25 22
ATHB7_MA0954.2_JASPAR_rc_shift4 (ATHB7:MA0954.2:JASPAR_rc)	0.709	0.545	0.104	0.879	0.853	410	235	418	266	379	341.600		; 1_m6_assembly_6 versus ATHB7_MA0954.2_JASPAR_rc (ATHB7:MA0954.2:JASPAR_rc); m=124/128; ncol2=13; w=-2; offset=-2; strand=R; shift=4; score= 341.6; ----awyCAATCATTg ; cor=0.709; Ncor=0.545; logoDP=0.104; NsEucl=0.879; NSW=0.853; rcor=410; rNcor=235; rlogoDP=418; rNsEucl=266; rNSW=379; rank_mean=341.600; match_rank= a 0 0 0 0 288 271 49 9 598 600 0 132 598 37 54 66 c 0 0 0 0 93 98 181 551 2 0 0 464 1 0 11 92 g 0 0 0 0 91 57 46 3 0 0 0 2 1 3 62 389 t 0 0 0 0 128 174 324 37 0 0 600 2 0 560 473 53
GLK21_MWP1_B73_1_m1_EEAD0371_EEADannot_rc_shift0 (GLK21_MWP1_B73_1_m1:EEAD0371:EEADannot_rc)	0.720	0.405	0.728	0.877	0.864	356	447	336	279	335	350.600		; 1_m6_assembly_6 versus GLK21_MWP1_B73_1_m1_EEAD0371_EEADannot_rc (GLK21_MWP1_B73_1_m1:EEAD0371:EEADannot_rc); m=125/128; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score= 350.6; raahaaRGAATAwtm- ; cor=0.720; Ncor=0.405; logoDP=0.728; NsEucl=0.877; NSW=0.864; rcor=356; rNcor=447; rlogoDP=336; rNsEucl=279; rNSW=335; rank_mean=350.600; match_rank= a 30 47 65 29 66 54 68 0 93 100 0 76 37 21 37 0 c 9 14 9 37 4 2 0 0 2 0 0 0 0 1 41 0 g 45 23 14 8 15 20 31 99 1 0 0 22 2 19 11 0 t 16 16 12 26 15 24 1 1 4 0 100 2 61 59 11 0
HAT3_UN0862.1_JASPAR_rc_shift7 (HAT3:UN0862.1:JASPAR_rc)	0.738	0.443	2.562	0.844	0.854	308	375	288	433	371	355.000		; 1_m6_assembly_6 versus HAT3_UN0862.1_JASPAR_rc (HAT3:UN0862.1:JASPAR_rc); m=126/128; ncol2=6; w=0; offset=1; strand=R; shift=7; score= 355; -------yAATCA--- ; cor=0.738; Ncor=0.443; logoDP=2.562; NsEucl=0.844; NSW=0.854; rcor=308; rNcor=375; rlogoDP=288; rNsEucl=433; rNSW=371; rank_mean=355.000; match_rank= a 0 0 0 0 0 0 0 58 846 854 46 108 815 0 0 0 c 0 0 0 0 0 0 0 542 68 62 61 757 34 0 0 0 g 0 0 0 0 0 0 0 27 12 28 0 56 58 0 0 0 t 0 0 0 0 0 0 0 371 72 54 891 77 91 0 0 0
ZHD10_MA1807.2_JASPAR_rc_shift8 (ZHD10:MA1807.2:JASPAR_rc)	0.710	0.568	1.095	0.856	0.833	402	208	328	415	434	357.400		; 1_m6_assembly_6 versus ZHD10_MA1807.2_JASPAR_rc (ZHD10:MA1807.2:JASPAR_rc); m=127/128; ncol2=8; w=0; offset=2; strand=R; shift=8; score= 357.4; --------ayTAATTA ; cor=0.710; Ncor=0.568; logoDP=1.095; NsEucl=0.856; NSW=0.833; rcor=402; rNcor=208; rlogoDP=328; rNsEucl=415; rNSW=434; rank_mean=357.400; match_rank= a 0 0 0 0 0 0 0 0 598 0 0 1000 1000 0 0 972 c 0 0 0 0 0 0 0 0 138 372 0 0 0 0 172 0 g 0 0 0 0 0 0 0 0 172 0 0 0 0 0 0 28 t 0 0 0 0 0 0 0 0 92 628 1000 0 0 1000 828 0
KAN2_MA1383.2_JASPAR_rc_shift4 (KAN2:MA1383.2:JASPAR_rc)	0.717	0.478	0.379	0.857	0.836	368	316	356	411	430	376.200		; 1_m6_assembly_6 versus KAN2_MA1383.2_JASPAR_rc (KAN2:MA1383.2:JASPAR_rc); m=128/128; ncol2=10; w=-2; offset=-2; strand=R; shift=4; score= 376.2; ----arAGAATATt-- ; cor=0.717; Ncor=0.478; logoDP=0.379; NsEucl=0.857; NSW=0.836; rcor=368; rNcor=316; rlogoDP=356; rNsEucl=411; rNSW=430; rank_mean=376.200; match_rank= a 0 0 0 0 116 123 159 1 212 214 0 214 44 51 0 0 c 0 0 0 0 12 12 0 0 0 0 0 0 0 8 0 0 g 0 0 0 0 40 55 48 210 0 0 0 0 0 18 0 0 t 0 0 0 0 46 24 7 3 2 0 214 0 170 137 0 0

One-to-n matrix alignment; reference matrix: 1_m4_assembly_4_shift8 ; 109 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
1_m4_assembly_4_shift8 (assembly_4)
; 1_m4_assembly_4 (assembly_4); m=0 (reference); ncol1=10; shift=8; ncol=18; --------wwCAACTAww ; Alignment reference a 0 0 0 0 0 0 0 0 96 68 0 220 220 0 0 220 67 84 c 0 0 0 0 0 0 0 0 22 53 220 0 0 220 0 0 43 37 g 0 0 0 0 0 0 0 0 29 23 0 0 0 0 0 0 43 31 t 0 0 0 0 0 0 0 0 73 76 0 0 0 0 220 0 67 68

MYB23_MA1767.1_JASPAR_shift9 (MYB23:MA1767.1:JASPAR) 0.897 0.673 9.852 0.925 0.950 21 73 24 18 18 30.800 16
; 1_m4_assembly_4 versus MYB23_MA1767.1_JASPAR (MYB23:MA1767.1:JASPAR); m=1/108; ncol2=11; w=0; offset=1; strand=D; shift=9; score= 30.8; ---------yCAACwAmm ; cor=0.897; Ncor=0.673; logoDP=9.852; NsEucl=0.925; NSW=0.950; rcor=21; rNcor=73; rlogoDP=24; rNsEucl=18; rNSW=18; rank_mean=30.800; match_rank=16 a 0 0 0 0 0 0 0 0 0 232 0 1000 1000 0 589 1000 420.29 251 c 0 0 0 0 0 0 0 0 0 348 986 0 0 1000 9.662 0 343 449 g 0 0 0 0 0 0 0 0 0 121 0 0 0 0 0 0 101 91.787 t 0 0 0 0 0 0 0 0 0 300 14.493 0 0 0 401 0 135 208

MYB23_MA1767.2_JASPAR_shift10 (MYB23:MA1767.2:JASPAR) 0.918 0.551 9.849 0.901 0.941 14 229 25 95 28 78.200 39
; 1_m4_assembly_4 versus MYB23_MA1767.2_JASPAR (MYB23:MA1767.2:JASPAR); m=2/108; ncol2=6; w=0; offset=2; strand=D; shift=10; score= 78.2; ----------CAACwA-- ; cor=0.918; Ncor=0.551; logoDP=9.849; NsEucl=0.901; NSW=0.941; rcor=14; rNcor=229; rlogoDP=25; rNsEucl=95; rNSW=28; rank_mean=78.200; match_rank=39 a 0 0 0 0 0 0 0 0 0 0 0 1000 1000 0 589 1000 0 0 c 0 0 0 0 0 0 0 0 0 0 986 0 0 1000 10 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 14 0 0 0 401 0 0 0

MYB60_MA1774.2_JASPAR_shift9 (MYB60:MA1774.2:JASPAR) 0.827 0.676 8.698 0.902 0.913 91 70 63 86 81 78.200 40
; 1_m4_assembly_4 versus MYB60_MA1774.2_JASPAR (MYB60:MA1774.2:JASPAR); m=3/108; ncol2=10; w=0; offset=1; strand=D; shift=9; score= 78.2; ---------yCAACyACy ; cor=0.827; Ncor=0.676; logoDP=8.698; NsEucl=0.902; NSW=0.913; rcor=91; rNcor=70; rlogoDP=63; rNsEucl=86; rNSW=81; rank_mean=78.200; match_rank=40 a 0 0 0 0 0 0 0 0 0 86 0 993 871 0 66 975 129 127 c 0 0 0 0 0 0 0 0 0 514 975 5 127 1000 529 0 835 514 g 0 0 0 0 0 0 0 0 0 52 0 2 0 0 0 25 0 0 t 0 0 0 0 0 0 0 0 0 348 25 0 2 0 405 0 36 360

MYB94_MA1781.2_JASPAR_shift9 (MYB94:MA1781.2:JASPAR) 0.821 0.672 8.326 0.901 0.911 99 76 73 96 91 87.000 48
; 1_m4_assembly_4 versus MYB94_MA1781.2_JASPAR (MYB94:MA1781.2:JASPAR); m=4/108; ncol2=10; w=0; offset=1; strand=D; shift=9; score= 87; ---------yCAACyACy ; cor=0.821; Ncor=0.672; logoDP=8.326; NsEucl=0.901; NSW=0.911; rcor=99; rNcor=76; rlogoDP=73; rNsEucl=96; rNSW=91; rank_mean=87.000; match_rank=48 a 0 0 0 0 0 0 0 0 0 108 0 998 788 0 42 975 125 51 c 0 0 0 0 0 0 0 0 0 571 931 2 212 1000 453 0 852 582 g 0 0 0 0 0 0 0 0 0 55 0 0 0 0 2 18 0 0 t 0 0 0 0 0 0 0 0 0 266 69 0 0 0 503 7 23 367

MYB23.DAP_M0571_AthalianaCistrome_rc_shift9 (MYB23.DAP:M0571:AthalianaCistrome_rc) 0.897 0.673 0.674 0.925 0.950 22 74 337 19 19 94.200
; 1_m4_assembly_4 versus MYB23.DAP_M0571_AthalianaCistrome_rc (MYB23.DAP:M0571:AthalianaCistrome_rc); m=5/108; ncol2=11; w=0; offset=1; strand=R; shift=9; score= 94.2; ---------yCAACwAmm ; cor=0.897; Ncor=0.673; logoDP=0.674; NsEucl=0.925; NSW=0.950; rcor=22; rNcor=74; rlogoDP=337; rNsEucl=19; rNSW=19; rank_mean=94.200; match_rank= a 0 0 0 0 0 0 0 0 0 48 0 207 207 0 122 207 87 52 c 0 0 0 0 0 0 0 0 0 72 204 0 0 207 2 0 71 93 g 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 21 19 t 0 0 0 0 0 0 0 0 0 62 3 0 0 0 83 0 28 43

AT1G18960_UN0826.1_JASPAR_shift7 (AT1G18960:UN0826.1:JASPAR) 0.909 0.496 6.773 0.906 0.947 15 292 126 65 21 103.800
; 1_m4_assembly_4 versus AT1G18960_UN0826.1_JASPAR (AT1G18960:UN0826.1:JASPAR); m=6/108; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 103.8; -------CAmCAAC---- ; cor=0.909; Ncor=0.496; logoDP=6.773; NsEucl=0.906; NSW=0.947; rcor=15; rNcor=292; rlogoDP=126; rNsEucl=65; rNSW=21; rank_mean=103.800; match_rank= a 0 0 0 0 0 0 0 0 959 584 0 959 929 0 0 0 0 0 c 0 0 0 0 0 0 0 1000 40 356 976 0 70 994 0 0 0 0 g 0 0 0 0 0 0 0 0 0 58 23 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 40 0 5 0 0 0 0

MYB96_MA2030.2_JASPAR_shift8 (MYB96:MA2030.2:JASPAR) 0.788 0.716 7.763 0.899 0.899 162 49 90 103 139 108.600
; 1_m4_assembly_4 versus MYB96_MA2030.2_JASPAR (MYB96:MA2030.2:JASPAR); m=7/108; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 108.6; --------mCCAACTACC ; cor=0.788; Ncor=0.716; logoDP=7.763; NsEucl=0.899; NSW=0.899; rcor=162; rNcor=49; rlogoDP=90; rNsEucl=103; rNSW=139; rank_mean=108.600; match_rank= a 0 0 0 0 0 0 0 0 38 8 1 131 113 0 11 116 14 8 c 0 0 0 0 0 0 0 0 74 107 123 1 15 132 23 2 116 102 g 0 0 0 0 0 0 0 0 10 1 0 0 3 0 1 6 0 0 t 0 0 0 0 0 0 0 0 11 17 9 1 2 1 98 9 3 23

MYB30.ampDAP_M0539_AthalianaCistrome_shift3 (MYB30.ampDAP:M0539:AthalianaCistrome) 0.822 0.548 7.250 0.912 0.923 97 232 118 42 60 109.800
; 1_m4_assembly_4 versus MYB30.ampDAP_M0539_AthalianaCistrome (MYB30.ampDAP:M0539:AthalianaCistrome); m=8/108; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 109.8; ---mamyymCCAACyAmy ; cor=0.822; Ncor=0.548; logoDP=7.250; NsEucl=0.912; NSW=0.923; rcor=97; rNcor=232; rlogoDP=118; rNsEucl=42; rNSW=60; rank_mean=109.800; match_rank= a 0 0 0 181 371 255 39 74 217 38 3 592 467 0 57 503 172 95 c 0 0 0 206 90 189 335 201 222 445 494 0 124 592 249 0 336 331 g 0 0 0 60 34 34 50 42 69 13 0 0 0 0 2 84 20 0 t 0 0 0 145 97 114 168 275 84 96 95 0 1 0 284 5 64 166

AtMYB85_II_AtMYB85_II_AthaMYB_rc_shift10 (AtMYB85_II:AtMYB85_II:AthaMYB_rc) 0.886 0.709 0.023 0.912 0.938 37 55 446 43 35 123.200
; 1_m4_assembly_4 versus AtMYB85_II_AtMYB85_II_AthaMYB_rc (AtMYB85_II:AtMYB85_II:AthaMYB_rc); m=9/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 123.2; ----------yAACwAvy ; cor=0.886; Ncor=0.709; logoDP=0.023; NsEucl=0.912; NSW=0.938; rcor=37; rNcor=55; rlogoDP=446; rNsEucl=43; rNSW=35; rank_mean=123.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 3 1 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 3 0 0 1 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 1

ATY13.ampDAP_M0537_AthalianaCistrome_shift3 (ATY13.ampDAP:M0537:AthalianaCistrome) 0.808 0.539 6.370 0.910 0.918 124 241 134 52 72 124.600
; 1_m4_assembly_4 versus ATY13.ampDAP_M0537_AthalianaCistrome (ATY13.ampDAP:M0537:AthalianaCistrome); m=10/108; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 124.6; ---cAmCymCCAACyAmy ; cor=0.808; Ncor=0.539; logoDP=6.370; NsEucl=0.910; NSW=0.918; rcor=124; rNcor=241; rlogoDP=134; rNsEucl=52; rNSW=72; rank_mean=124.600; match_rank= a 0 0 0 101 401 282 0 123 280 57 12 564 421 0 104 409 141 113 c 0 0 0 307 73 185 426 147 157 447 480 0 136 564 221 23 305 273 g 0 0 0 24 27 18 9 32 49 0 2 0 2 0 19 86 9 8 t 0 0 0 132 63 79 129 262 78 60 70 0 5 0 220 46 109 170

ATMYB31_MA1738.1_JASPAR_shift3 (ATMYB31:MA1738.1:JASPAR) 0.805 0.537 6.269 0.909 0.917 131 243 136 54 75 127.800
; 1_m4_assembly_4 versus ATMYB31_MA1738.1_JASPAR (ATMYB31:MA1738.1:JASPAR); m=11/108; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 127.8; ---yAmCtmCCAMCyAmh ; cor=0.805; Ncor=0.537; logoDP=6.269; NsEucl=0.909; NSW=0.917; rcor=131; rNcor=243; rlogoDP=136; rNsEucl=54; rNSW=75; rank_mean=127.800; match_rank= a 0 0 0 174 769 559 0 166 486 106 27.027 1000 736 0 199 760 289 264 c 0 0 0 505 113 285 753 245 302 807 765 0 258 1000 373 45.608 527 439 g 0 0 0 43.919 20.27 23.649 10.135 30.405 76.014 0 0 0 3.378 0 28.716 160 18.581 0 t 0 0 0 277 97.973 132 236 559 135 86.149 207.77 0 1.689 0 399 33.784 166 297

ATY13.DAP_M0496_AthalianaCistrome_shift3 (ATY13.DAP:M0496:AthalianaCistrome) 0.805 0.537 6.267 0.909 0.917 133 244 137 56 76 129.200
; 1_m4_assembly_4 versus ATY13.DAP_M0496_AthalianaCistrome (ATY13.DAP:M0496:AthalianaCistrome); m=12/108; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 129.2; ---yAmCtmCCAMCyAmh ; cor=0.805; Ncor=0.537; logoDP=6.267; NsEucl=0.909; NSW=0.917; rcor=133; rNcor=244; rlogoDP=137; rNsEucl=56; rNSW=76; rank_mean=129.200; match_rank= a 0 0 0 103 455 331 0 98 288 63 16 592 436 0 118 450 171 156 c 0 0 0 299 67 169 446 145 179 478 453 0 153 592 221 27 312 260 g 0 0 0 26 12 14 6 18 45 0 0 0 2 0 17 95 11 0 t 0 0 0 164 58 78 140 331 80 51 123 0 1 0 236 20 98 176

AtMYB73_II_AtMYB73_II_AthaMYB_rc_shift10 (AtMYB73_II:AtMYB73_II:AthaMYB_rc) 0.861 0.689 0.145 0.903 0.924 54 65 406 84 57 133.200
; 1_m4_assembly_4 versus AtMYB73_II_AtMYB73_II_AthaMYB_rc (AtMYB73_II:AtMYB73_II:AthaMYB_rc); m=13/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 133.2; ----------yAACTRhY ; cor=0.861; Ncor=0.689; logoDP=0.145; NsEucl=0.903; NSW=0.924; rcor=54; rNcor=65; rlogoDP=406; rNsEucl=84; rNSW=57; rank_mean=133.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 3 2 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 1 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 4 0 1 1

AtMYB45_II_AtMYB45_II_AthaMYB_rc_shift10 (AtMYB45_II:AtMYB45_II:AthaMYB_rc) 0.861 0.689 0.024 0.903 0.925 55 66 442 80 56 139.800
; 1_m4_assembly_4 versus AtMYB45_II_AtMYB45_II_AthaMYB_rc (AtMYB45_II:AtMYB45_II:AthaMYB_rc); m=14/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 139.8; ----------yAACTAmC ; cor=0.861; Ncor=0.689; logoDP=0.024; NsEucl=0.903; NSW=0.925; rcor=55; rNcor=66; rlogoDP=442; rNsEucl=80; rNSW=56; rank_mean=139.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 4 0 1 5 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 5 0 0 2 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 4 0 0 1

AtMYB124_II_AtMYB124_II_AthaMYB_rc_shift10 (AtMYB124_II:AtMYB124_II:AthaMYB_rc) 0.855 0.684 0.025 0.900 0.921 61 67 431 99 63 144.200
; 1_m4_assembly_4 versus AtMYB124_II_AtMYB124_II_AthaMYB_rc (AtMYB124_II:AtMYB124_II:AthaMYB_rc); m=15/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 144.2; ----------yAACWAvY ; cor=0.855; Ncor=0.684; logoDP=0.025; NsEucl=0.900; NSW=0.921; rcor=61; rNcor=67; rlogoDP=431; rNsEucl=99; rNSW=63; rank_mean=144.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 4 2 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 1 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 1

MYB30_MA1768.2_JASPAR_shift9 (MYB30:MA1768.2:JASPAR) 0.799 0.553 6.888 0.897 0.905 141 225 123 114 120 144.600
; 1_m4_assembly_4 versus MYB30_MA1768.2_JASPAR (MYB30:MA1768.2:JASPAR); m=16/108; ncol2=12; w=0; offset=1; strand=D; shift=9; score= 144.6; ---------cCAACyACC ; cor=0.799; Ncor=0.553; logoDP=6.888; NsEucl=0.897; NSW=0.905; rcor=141; rNcor=225; rlogoDP=123; rNsEucl=114; rNSW=120; rank_mean=144.600; match_rank= a 0 0 0 0 0 0 0 0 0 180 12 983 880 0 62 764 167 86 c 0 0 0 0 0 0 0 0 0 537 843 15 103 1000 525 12 744 682 g 0 0 0 0 0 0 0 0 0 67 0 0 3 0 22 173 0 0 t 0 0 0 0 0 0 0 0 0 215 145 2 13 0 391 51 89 232

AtMYB94_II_AtMYB94_II_AthaMYB_rc_shift10 (AtMYB94_II:AtMYB94_II:AthaMYB_rc) 0.851 0.680 0.039 0.899 0.919 65 68 423 102 67 145.000
; 1_m4_assembly_4 versus AtMYB94_II_AtMYB94_II_AthaMYB_rc (AtMYB94_II:AtMYB94_II:AthaMYB_rc); m=17/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 145; ----------CAACTAaC ; cor=0.851; Ncor=0.680; logoDP=0.039; NsEucl=0.899; NSW=0.919; rcor=65; rNcor=68; rlogoDP=423; rNsEucl=102; rNSW=67; rank_mean=145.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 4 0 1 4 2 0 c 0 0 0 0 0 0 0 0 0 0 4 0 1 5 0 0 1 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 1 0

MYB60.DAP_M0563_AthalianaCistrome_shift4 (MYB60.DAP:M0563:AthalianaCistrome) 0.809 0.426 8.708 0.907 0.913 120 404 61 64 87 147.200
; 1_m4_assembly_4 versus MYB60.DAP_M0563_AthalianaCistrome (MYB60.DAP:M0563:AthalianaCistrome); m=18/108; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score= 147.2; ----hwwyyyCAACyACy ; cor=0.809; Ncor=0.426; logoDP=8.708; NsEucl=0.907; NSW=0.913; rcor=120; rNcor=404; rlogoDP=61; rNsEucl=64; rNSW=87; rank_mean=147.200; match_rank= a 0 0 0 0 123 145 111 64 49 38 0 439 385 0 29 431 57 56 c 0 0 0 0 139 84 80 160 162 227 431 2 56 442 234 0 369 227 g 0 0 0 0 49 67 75 38 40 23 0 1 0 0 0 11 0 0 t 0 0 0 0 131 146 176 180 191 154 11 0 1 0 179 0 16 159

MYB60_MA1774.1_JASPAR_shift4 (MYB60:MA1774.1:JASPAR) 0.809 0.426 8.707 0.907 0.913 121 405 62 63 86 147.400
; 1_m4_assembly_4 versus MYB60_MA1774.1_JASPAR (MYB60:MA1774.1:JASPAR); m=19/108; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score= 147.4; ----hwwyyyCAACyACy ; cor=0.809; Ncor=0.426; logoDP=8.707; NsEucl=0.907; NSW=0.913; rcor=121; rNcor=405; rlogoDP=62; rNsEucl=63; rNSW=86; rank_mean=147.400; match_rank= a 0 0 0 0 278 328 251 145 110.86 85.973 0 993 871 0 65.611 975 129 127 c 0 0 0 0 314.48 190 181 362 367 514 975 4.525 127 1000 529 0 835 514 g 0 0 0 0 110.86 152 170 85.973 90.498 52.036 0 2.262 0 0 0 24.887 0 0 t 0 0 0 0 296.38 330 398.19 407.24 432 348 24.887 0 2.262 0 405 0 36.199 360

MYB30_MA1768.1_JASPAR_shift6 (MYB30:MA1768.1:JASPAR) 0.783 0.522 6.895 0.903 0.906 166 261 122 78 110 147.400
; 1_m4_assembly_4 versus MYB30_MA1768.1_JASPAR (MYB30:MA1768.1:JASPAR); m=20/108; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score= 147.4; ------yymcCAACyACC ; cor=0.783; Ncor=0.522; logoDP=6.895; NsEucl=0.903; NSW=0.906; rcor=166; rNcor=261; rlogoDP=122; rNsEucl=78; rNSW=110; rank_mean=147.400; match_rank= a 0 0 0 0 0 0 153 141 261 180 11.785 983 880 0 62.29 764.31 167 85.859 c 0 0 0 0 0 0 306 357 439 537 843 15.152 103 1000 525 11.785 744 682 g 0 0 0 0 0 0 195 84.175 67.34 67.34 0 0 3.367 0 21.886 173 0 0 t 0 0 0 0 0 0 345 418 232 215 145 1.684 13.468 0 391 50.505 89.226 232

AtMYB72_II_AtMYB72_II_AthaMYB_rc_shift10 (AtMYB72_II:AtMYB72_II:AthaMYB_rc) 0.850 0.680 0.024 0.900 0.921 66 69 442 98 62 147.400
; 1_m4_assembly_4 versus AtMYB72_II_AtMYB72_II_AthaMYB_rc (AtMYB72_II:AtMYB72_II:AthaMYB_rc); m=21/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 147.4; ----------yAACtAcy ; cor=0.850; Ncor=0.680; logoDP=0.024; NsEucl=0.900; NSW=0.921; rcor=66; rNcor=69; rlogoDP=442; rNsEucl=98; rNSW=62; rank_mean=147.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 4 0 1 5 1 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 5 1 0 3 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 2

MYB30.DAP_M0549_AthalianaCistrome_shift6 (MYB30.DAP:M0549:AthalianaCistrome) 0.783 0.522 6.896 0.903 0.906 168 262 121 79 111 148.200
; 1_m4_assembly_4 versus MYB30.DAP_M0549_AthalianaCistrome (MYB30.DAP:M0549:AthalianaCistrome); m=22/108; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score= 148.2; ------yymcCAACyACC ; cor=0.783; Ncor=0.522; logoDP=6.896; NsEucl=0.903; NSW=0.906; rcor=168; rNcor=262; rlogoDP=121; rNsEucl=79; rNSW=111; rank_mean=148.200; match_rank= a 0 0 0 0 0 0 91 84 155 107 7 584 523 0 37 454 99 51 c 0 0 0 0 0 0 182 212 261 319 501 9 61 594 312 7 442 405 g 0 0 0 0 0 0 116 50 40 40 0 0 2 0 13 103 0 0 t 0 0 0 0 0 0 205 248 138 128 86 1 8 0 232 30 53 138

AtMYB14_II_AtMYB14_II_AthaMYB_rc_shift10 (AtMYB14_II:AtMYB14_II:AthaMYB_rc) 0.844 0.675 0.025 0.898 0.917 71 71 431 111 74 151.600
; 1_m4_assembly_4 versus AtMYB14_II_AtMYB14_II_AthaMYB_rc (AtMYB14_II:AtMYB14_II:AthaMYB_rc); m=23/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 151.6; ----------yAACtAmy ; cor=0.844; Ncor=0.675; logoDP=0.025; NsEucl=0.898; NSW=0.917; rcor=71; rNcor=71; rlogoDP=431; rNsEucl=111; rNSW=74; rank_mean=151.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 5 0 1 6 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 6 1 0 3 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 0 0 2

AtMYB30_II_AtMYB30_II_AthaMYB_rc_shift10 (AtMYB30_II:AtMYB30_II:AthaMYB_rc) 0.840 0.672 0.143 0.895 0.912 73 75 407 130 89 154.800
; 1_m4_assembly_4 versus AtMYB30_II_AtMYB30_II_AthaMYB_rc (AtMYB30_II:AtMYB30_II:AthaMYB_rc); m=24/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 154.8; ----------YAMCTRhC ; cor=0.840; Ncor=0.672; logoDP=0.143; NsEucl=0.895; NSW=0.912; rcor=73; rNcor=75; rlogoDP=407; rNsEucl=130; rNSW=89; rank_mean=154.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 3 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 4 0 0 1 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 1 0

AtMYB10_I_AtMYB10_I_AthaMYB_rc_shift10 (AtMYB10_I:AtMYB10_I:AthaMYB_rc) 0.821 0.657 0.849 0.892 0.906 98 88 332 151 109 155.600
; 1_m4_assembly_4 versus AtMYB10_I_AtMYB10_I_AthaMYB_rc (AtMYB10_I:AtMYB10_I:AthaMYB_rc); m=25/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 155.6; ----------yAACwdww ; cor=0.821; Ncor=0.657; logoDP=0.849; NsEucl=0.892; NSW=0.906; rcor=98; rNcor=88; rlogoDP=332; rNsEucl=151; rNSW=109; rank_mean=155.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 1 1 1 c 0 0 0 0 0 0 0 0 0 0 2 0 0 3 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 1 2 2

MYB94_MA1781.1_JASPAR_shift4 (MYB94:MA1781.1:JASPAR) 0.802 0.422 8.338 0.905 0.910 136 411 72 70 94 156.600
; 1_m4_assembly_4 versus MYB94_MA1781.1_JASPAR (MYB94:MA1781.1:JASPAR); m=26/108; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score= 156.6; ----whyyyyCAACyACy ; cor=0.802; Ncor=0.422; logoDP=8.338; NsEucl=0.905; NSW=0.910; rcor=136; rNcor=411; rlogoDP=72; rNsEucl=70; rNSW=94; rank_mean=156.600; match_rank= a 0 0 0 0 400 295 192.24 125.22 187 108 0 998 788.36 0 42.328 975 125.22 51.146 c 0 0 0 0 211.64 261 302 302 455 571 931 1.764 211.64 1000 453 0 852 582 g 0 0 0 0 105.82 98.765 164 109 105.82 54.674 0 0 0 0 1.764 17.637 0 0 t 0 0 0 0 282 346 342 464 252 266 68.783 0 0 0 503 7.055 22.928 367

AT1G24250.DAP_M0719_AthalianaCistrome_shift0 (AT1G24250.DAP:M0719:AthalianaCistrome) 0.808 0.449 5.066 0.910 0.919 122 363 184 49 65 156.600
; 1_m4_assembly_4 versus AT1G24250.DAP_M0719_AthalianaCistrome (AT1G24250.DAP:M0719:AthalianaCistrome); m=27/108; ncol2=18; w=-8; offset=-8; strand=D; shift=0; score= 156.6; tyyyAACtaCCAMCyAmh ; cor=0.808; Ncor=0.449; logoDP=5.066; NsEucl=0.910; NSW=0.919; rcor=122; rNcor=363; rlogoDP=184; rNsEucl=49; rNSW=65; rank_mean=156.600; match_rank= a 96 98 82 30 461 350 0 78 295 65 32 438 339 9 103 338 163 133 c 97 173 189 308 2 82 451 100 70 343 325 3 118 451 173 26 212 176 g 65 35 46 10 0 10 0 9 44 27 0 3 0 6 17 82 14 5 t 209 161 150 119 4 25 16 280 58 32 110 23 10 1 174 21 78 153

AtMYB59_II_AtMYB59_II_AthaMYB_rc_shift10 (AtMYB59_II:AtMYB59_II:AthaMYB_rc) 0.838 0.670 0.025 0.896 0.914 76 77 431 123 79 157.200
; 1_m4_assembly_4 versus AtMYB59_II_AtMYB59_II_AthaMYB_rc (AtMYB59_II:AtMYB59_II:AthaMYB_rc); m=28/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 157.2; ----------yAAChAvy ; cor=0.838; Ncor=0.670; logoDP=0.025; NsEucl=0.896; NSW=0.914; rcor=76; rNcor=77; rlogoDP=431; rNsEucl=123; rNSW=79; rank_mean=157.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 4 1 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 1 0 2 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 2

MYB99_UN0368.1_JASPAR_shift8 (MYB99:UN0368.1:JASPAR) 0.740 0.740 9.154 0.889 0.877 293 36 39 172 249 157.800
; 1_m4_assembly_4 versus MYB99_UN0368.1_JASPAR (MYB99:UN0368.1:JASPAR); m=29/108; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 157.8; --------yyCACCTAmy ; cor=0.740; Ncor=0.740; logoDP=9.154; NsEucl=0.889; NSW=0.877; rcor=293; rNcor=36; rlogoDP=39; rNsEucl=172; rNSW=249; rank_mean=157.800; match_rank= a 0 0 0 0 0 0 0 0 154 168 0 987 0 0 1 1020 535 140 c 0 0 0 0 0 0 0 0 332 312 1023 1 1004 1022 0 3 372 471 g 0 0 0 0 0 0 0 0 106 90 0 26 11 1 12 0 32 35 t 0 0 0 0 0 0 0 0 431 453 0 9 8 0 1010 0 84 377

MYB96_MA2030.1_JASPAR_shift4 (MYB96:MA2030.1:JASPAR) 0.788 0.463 7.763 0.899 0.899 162 340 90 103 139 166.800
; 1_m4_assembly_4 versus MYB96_MA2030.1_JASPAR (MYB96:MA2030.1:JASPAR); m=30/108; ncol2=17; w=-4; offset=-4; strand=D; shift=4; score= 166.8; ----whcymCCAACTACC ; cor=0.788; Ncor=0.463; logoDP=7.763; NsEucl=0.899; NSW=0.899; rcor=162; rNcor=340; rlogoDP=90; rNsEucl=103; rNSW=139; rank_mean=166.800; match_rank= a 0 0 0 0 63 46 11 20 38 8 1 131 113 0 11 116 14 8 c 0 0 0 0 20 36 78 50 74 107 123 1 15 132 23 2 116 102 g 0 0 0 0 10 8 11 10 10 1 0 0 3 0 1 6 0 0 t 0 0 0 0 40 43 33 53 11 17 9 1 2 1 98 9 3 23

AtMYB6_II_AtMYB6_II_AthaMYB_rc_shift10 (AtMYB6_II:AtMYB6_II:AthaMYB_rc) 0.831 0.665 0.023 0.894 0.910 86 83 446 133 96 168.800
; 1_m4_assembly_4 versus AtMYB6_II_AtMYB6_II_AthaMYB_rc (AtMYB6_II:AtMYB6_II:AthaMYB_rc); m=31/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 168.8; ----------yAAChAvy ; cor=0.831; Ncor=0.665; logoDP=0.023; NsEucl=0.894; NSW=0.910; rcor=86; rNcor=83; rlogoDP=446; rNsEucl=133; rNSW=96; rank_mean=168.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 3 1 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 3 1 0 1 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1

AtMYB112_II_AtMYB112_II_AthaMYB_rc_shift10 (AtMYB112_II:AtMYB112_II:AthaMYB_rc) 0.817 0.653 0.272 0.891 0.904 105 90 371 162 121 169.800
; 1_m4_assembly_4 versus AtMYB112_II_AtMYB112_II_AthaMYB_rc (AtMYB112_II:AtMYB112_II:AthaMYB_rc); m=32/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 169.8; ----------yAACtAvy ; cor=0.817; Ncor=0.653; logoDP=0.272; NsEucl=0.891; NSW=0.904; rcor=105; rNcor=90; rlogoDP=371; rNsEucl=162; rNSW=121; rank_mean=169.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 4 1.67 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 5 1 0 1.67 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.67 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 1 0 2

AtMYB80_II_AtMYB80_II_AthaMYB_rc_shift10 (AtMYB80_II:AtMYB80_II:AthaMYB_rc) 0.826 0.660 0.023 0.892 0.907 93 87 446 146 107 175.800
; 1_m4_assembly_4 versus AtMYB80_II_AtMYB80_II_AthaMYB_rc (AtMYB80_II:AtMYB80_II:AthaMYB_rc); m=33/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 175.8; ----------yAmCwAmC ; cor=0.826; Ncor=0.660; logoDP=0.023; NsEucl=0.892; NSW=0.907; rcor=93; rNcor=87; rlogoDP=446; rNsEucl=146; rNSW=107; rank_mean=175.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 4 0 2 6 2 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 6 0 0 3 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 4 0 0 1

MYB52_MYB52_2_ArabidopsisPBM_rc_shift9 (MYB52:MYB52_2:ArabidopsisPBM_rc) 0.791 0.647 0.259 0.893 0.898 154 97 379 136 142 181.600
; 1_m4_assembly_4 versus MYB52_MYB52_2_ArabidopsisPBM_rc (MYB52:MYB52_2:ArabidopsisPBM_rc); m=34/108; ncol2=10; w=0; offset=1; strand=R; shift=9; score= 181.6; ---------gcAACTAAC ; cor=0.791; Ncor=0.647; logoDP=0.259; NsEucl=0.893; NSW=0.898; rcor=154; rNcor=97; rlogoDP=379; rNsEucl=136; rNSW=142; rank_mean=181.600; match_rank= a 0 0 0 0 0 0 0 0 0 23 9 89 92 3 8 95 92 2 c 0 0 0 0 0 0 0 0 0 17 62 6 3 92 4 1 5 93 g 0 0 0 0 0 0 0 0 0 45 5 3 4 3 15 3 1 2 t 0 0 0 0 0 0 0 0 0 15 24 2 1 2 73 1 2 3

AtMYB121_II_AtMYB121_II_AthaMYB_rc_shift10 (AtMYB121_II:AtMYB121_II:AthaMYB_rc) 0.819 0.655 0.024 0.891 0.905 102 89 441 160 117 181.800
; 1_m4_assembly_4 versus AtMYB121_II_AtMYB121_II_AthaMYB_rc (AtMYB121_II:AtMYB121_II:AthaMYB_rc); m=35/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 181.8; ----------yAMCwAmY ; cor=0.819; Ncor=0.655; logoDP=0.024; NsEucl=0.891; NSW=0.905; rcor=102; rNcor=89; rlogoDP=441; rNsEucl=160; rNSW=117; rank_mean=181.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 7 5 0 2 7 2 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 7 1 0 4 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 0 0 2

AtMYB0_II_AtMYB0_II_AthaMYB_rc_shift10 (AtMYB0_II:AtMYB0_II:AthaMYB_rc) 0.828 0.663 0.028 0.889 0.901 90 86 425 178 136 183.000
; 1_m4_assembly_4 versus AtMYB0_II_AtMYB0_II_AthaMYB_rc (AtMYB0_II:AtMYB0_II:AthaMYB_rc); m=36/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 183; ----------yAACTAmy ; cor=0.828; Ncor=0.663; logoDP=0.028; NsEucl=0.889; NSW=0.901; rcor=90; rNcor=86; rlogoDP=425; rNsEucl=178; rNSW=136; rank_mean=183.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 3 2 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 3 0 0 1 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 1

AtMYB13_II_AtMYB13_II_AthaMYB_rc_shift10 (AtMYB13_II:AtMYB13_II:AthaMYB_rc) 0.817 0.653 0.024 0.889 0.902 106 91 445 168 130 188.000
; 1_m4_assembly_4 versus AtMYB13_II_AtMYB13_II_AthaMYB_rc (AtMYB13_II:AtMYB13_II:AthaMYB_rc); m=37/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 188; ----------CAmCwAcC ; cor=0.817; Ncor=0.653; logoDP=0.024; NsEucl=0.889; NSW=0.902; rcor=106; rNcor=91; rlogoDP=445; rNsEucl=168; rNSW=130; rank_mean=188.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 3 0 2 5 1 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 5 0 0 3 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 3 0 0 1

AtMYB99_II_AtMYB99_II_AthaMYB_rc_shift10 (AtMYB99_II:AtMYB99_II:AthaMYB_rc) 0.811 0.649 0.023 0.889 0.901 115 95 446 175 135 193.200
; 1_m4_assembly_4 versus AtMYB99_II_AtMYB99_II_AthaMYB_rc (AtMYB99_II:AtMYB99_II:AthaMYB_rc); m=38/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 193.2; ----------yAmCwAcy ; cor=0.811; Ncor=0.649; logoDP=0.023; NsEucl=0.889; NSW=0.901; rcor=115; rNcor=95; rlogoDP=446; rNsEucl=175; rNSW=135; rank_mean=193.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 4 0 2 6 1 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 6 1 0 4 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 2

AtMYB15_I_AtMYB15_I_AthaMYB_rc_shift10 (AtMYB15_I:AtMYB15_I:AthaMYB_rc) 0.794 0.635 0.328 0.885 0.895 149 110 362 215 151 197.400
; 1_m4_assembly_4 versus AtMYB15_I_AtMYB15_I_AthaMYB_rc (AtMYB15_I:AtMYB15_I:AthaMYB_rc); m=39/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 197.4; ----------yAACtgww ; cor=0.794; Ncor=0.635; logoDP=0.328; NsEucl=0.885; NSW=0.895; rcor=149; rNcor=110; rlogoDP=362; rNsEucl=215; rNSW=151; rank_mean=197.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 1 2 2 c 0 0 0 0 0 0 0 0 0 0 3 0 0 5 1 0 1 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 1 2 2

AtMYB44_II_AtMYB44_II_AthaMYB_rc_shift10 (AtMYB44_II:AtMYB44_II:AthaMYB_rc) 0.798 0.639 0.267 0.885 0.894 142 107 376 217 154 199.200
; 1_m4_assembly_4 versus AtMYB44_II_AtMYB44_II_AthaMYB_rc (AtMYB44_II:AtMYB44_II:AthaMYB_rc); m=40/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 199.2; ----------yAACTahC ; cor=0.798; Ncor=0.639; logoDP=0.267; NsEucl=0.885; NSW=0.894; rcor=142; rNcor=107; rlogoDP=376; rNsEucl=217; rNSW=154; rank_mean=199.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 3 2.50 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 5 1 0 1.25 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 1 1.25 1

AtMYB37_I_AtMYB37_I_AthaMYB_rc_shift10 (AtMYB37_I:AtMYB37_I:AthaMYB_rc) 0.799 0.639 0.160 0.886 0.897 140 106 401 207 143 199.400
; 1_m4_assembly_4 versus AtMYB37_I_AtMYB37_I_AthaMYB_rc (AtMYB37_I:AtMYB37_I:AthaMYB_rc); m=41/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 199.4; ----------yAACtgaw ; cor=0.799; Ncor=0.639; logoDP=0.160; NsEucl=0.886; NSW=0.897; rcor=140; rNcor=106; rlogoDP=401; rNsEucl=207; rNSW=143; rank_mean=199.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 1 2 2 c 0 0 0 0 0 0 0 0 0 0 3 0 0 5 1 0 1 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 1 1 2

AtMYB103_II_AtMYB103_II_AthaMYB_rc_shift10 (AtMYB103_II:AtMYB103_II:AthaMYB_rc) 0.806 0.645 0.025 0.887 0.898 128 101 431 201 141 200.400
; 1_m4_assembly_4 versus AtMYB103_II_AtMYB103_II_AthaMYB_rc (AtMYB103_II:AtMYB103_II:AthaMYB_rc); m=42/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 200.4; ----------yAMCwAmY ; cor=0.806; Ncor=0.645; logoDP=0.025; NsEucl=0.887; NSW=0.898; rcor=128; rNcor=101; rlogoDP=431; rNsEucl=201; rNSW=141; rank_mean=200.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 8 6 0 2 8 2 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 8 1 0 5 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 5 0 0 2

AtMYB121_I_AtMYB121_I_AthaMYB_rc_shift10 (AtMYB121_I:AtMYB121_I:AthaMYB_rc) 0.790 0.632 0.625 0.884 0.892 159 122 339 233 166 203.800
; 1_m4_assembly_4 versus AtMYB121_I_AtMYB121_I_AthaMYB_rc (AtMYB121_I:AtMYB121_I:AthaMYB_rc); m=43/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 203.8; ----------yAACWdwh ; cor=0.790; Ncor=0.632; logoDP=0.625; NsEucl=0.884; NSW=0.892; rcor=159; rNcor=122; rlogoDP=339; rNsEucl=233; rNSW=166; rank_mean=203.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 1 2 1 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 0 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 1 2 2

AtMYB35_II_AtMYB35_II_AthaMYB_rc_shift10 (AtMYB35_II:AtMYB35_II:AthaMYB_rc) 0.805 0.644 0.025 0.885 0.895 132 103 431 214 150 206.000
; 1_m4_assembly_4 versus AtMYB35_II_AtMYB35_II_AthaMYB_rc (AtMYB35_II:AtMYB35_II:AthaMYB_rc); m=44/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 206; ----------yAACwAsy ; cor=0.805; Ncor=0.644; logoDP=0.025; NsEucl=0.885; NSW=0.895; rcor=132; rNcor=103; rlogoDP=431; rNsEucl=214; rNSW=150; rank_mean=206.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 2 0 1 2 0 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 1 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1

MYB94.DAP_M0556_AthalianaCistrome_rc_shift4 (MYB94.DAP:M0556:AthalianaCistrome_rc) 0.802 0.422 1.377 0.905 0.910 137 412 321 71 95 207.200
; 1_m4_assembly_4 versus MYB94.DAP_M0556_AthalianaCistrome_rc (MYB94.DAP:M0556:AthalianaCistrome_rc); m=45/108; ncol2=19; w=-4; offset=-4; strand=R; shift=4; score= 207.2; ----whyyyyCAACyACy ; cor=0.802; Ncor=0.422; logoDP=1.377; NsEucl=0.905; NSW=0.910; rcor=137; rNcor=412; rlogoDP=321; rNsEucl=71; rNSW=95; rank_mean=207.200; match_rank= a 0 0 0 0 227 167 109 71 106 61 0 566 447 0 24 553 71 29 c 0 0 0 0 120 148 171 171 258 324 528 1 120 567 257 0 483 330 g 0 0 0 0 60 56 93 62 60 31 0 0 0 0 1 10 0 0 t 0 0 0 0 160 196 194 263 143 151 39 0 0 0 285 4 13 208

AtMYB49_II_AtMYB49_II_AthaMYB_rc_shift10 (AtMYB49_II:AtMYB49_II:AthaMYB_rc) 0.793 0.634 0.219 0.884 0.892 152 113 387 227 162 208.200
; 1_m4_assembly_4 versus AtMYB49_II_AtMYB49_II_AthaMYB_rc (AtMYB49_II:AtMYB49_II:AthaMYB_rc); m=46/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 208.2; ----------yAACyAmY ; cor=0.793; Ncor=0.634; logoDP=0.219; NsEucl=0.884; NSW=0.892; rcor=152; rNcor=113; rlogoDP=387; rNsEucl=227; rNSW=162; rank_mean=208.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 7 6 0 1 6 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 7 2 0 4 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 1 0 2

AtMYB31_II_AtMYB31_II_AthaMYB_rc_shift10 (AtMYB31_II:AtMYB31_II:AthaMYB_rc) 0.797 0.637 0.159 0.883 0.891 147 108 402 240 178 215.000
; 1_m4_assembly_4 versus AtMYB31_II_AtMYB31_II_AthaMYB_rc (AtMYB31_II:AtMYB31_II:AthaMYB_rc); m=47/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 215; ----------CAmCwrbC ; cor=0.797; Ncor=0.637; logoDP=0.159; NsEucl=0.883; NSW=0.891; rcor=147; rNcor=108; rlogoDP=402; rNsEucl=240; rNSW=178; rank_mean=215.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 2 0 1 2 0 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 3 0 0 1 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0

MYB96.DAP_M0547_AthalianaCistrome_rc_shift3 (MYB96.DAP:M0547:AthalianaCistrome_rc) 0.787 0.437 0.209 0.906 0.911 164 390 391 67 92 220.800
; 1_m4_assembly_4 versus MYB96.DAP_M0547_AthalianaCistrome_rc (MYB96.DAP:M0547:AthalianaCistrome_rc); m=48/108; ncol2=18; w=-5; offset=-5; strand=R; shift=3; score= 220.8; ---yAaCyaCCAmCyAmh ; cor=0.787; Ncor=0.437; logoDP=0.209; NsEucl=0.906; NSW=0.911; rcor=164; rNcor=390; rlogoDP=391; rNsEucl=67; rNSW=92; rank_mean=220.800; match_rank= a 0 0 0 67 526 392 0 108 331 42 25 576 362 12 144 416 185 151 c 0 0 0 334 41 142 538 177 109 490 446 0 217 577 176 47 290 251 g 0 0 0 28 10 12 8 35 80 10 0 6 4 0 31 97 21 13 t 0 0 0 167 19 50 50 276 76 54 125 14 13 7 245 36 100 181

AtMYB40_II_AtMYB40_II_AthaMYB_rc_shift10 (AtMYB40_II:AtMYB40_II:AthaMYB_rc) 0.783 0.627 0.244 0.881 0.887 167 127 380 256 194 224.800
; 1_m4_assembly_4 versus AtMYB40_II_AtMYB40_II_AthaMYB_rc (AtMYB40_II:AtMYB40_II:AthaMYB_rc); m=49/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 224.8; ----------yAACyAvy ; cor=0.783; Ncor=0.627; logoDP=0.244; NsEucl=0.881; NSW=0.887; rcor=167; rNcor=127; rlogoDP=380; rNsEucl=256; rNSW=194; rank_mean=224.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 6 0 1 5 1.71 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 6 2 0 2.57 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.71 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 3 1 0 3

AtMYB102_I_AtMYB102_I_AthaMYB_rc_shift10 (AtMYB102_I:AtMYB102_I:AthaMYB_rc) 0.781 0.625 0.224 0.882 0.888 174 130 385 251 189 225.800
; 1_m4_assembly_4 versus AtMYB102_I_AtMYB102_I_AthaMYB_rc (AtMYB102_I:AtMYB102_I:AthaMYB_rc); m=50/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 225.8; ----------yAACtkww ; cor=0.781; Ncor=0.625; logoDP=0.224; NsEucl=0.882; NSW=0.888; rcor=174; rNcor=130; rlogoDP=385; rNsEucl=251; rNSW=189; rank_mean=225.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 6 0 1 1 2 2 c 0 0 0 0 0 0 0 0 0 0 3 0 0 6 1 0 1 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 2 2 3

AtMYB105_I_AtMYB105_I_AthaMYB_rc_shift10 (AtMYB105_I:AtMYB105_I:AthaMYB_rc) 0.778 0.622 0.505 0.880 0.885 182 132 351 261 206 226.400
; 1_m4_assembly_4 versus AtMYB105_I_AtMYB105_I_AthaMYB_rc (AtMYB105_I:AtMYB105_I:AthaMYB_rc); m=51/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 226.4; ----------yAACWddW ; cor=0.778; Ncor=0.622; logoDP=0.505; NsEucl=0.880; NSW=0.885; rcor=182; rNcor=132; rlogoDP=351; rNsEucl=261; rNSW=206; rank_mean=226.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 1 1 1 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 2 2 3

AtMYB19_II_AtMYB19_II_AthaMYB_rc_shift10 (AtMYB19_II:AtMYB19_II:AthaMYB_rc) 0.791 0.632 0.024 0.883 0.890 157 117 442 245 179 228.000
; 1_m4_assembly_4 versus AtMYB19_II_AtMYB19_II_AthaMYB_rc (AtMYB19_II:AtMYB19_II:AthaMYB_rc); m=52/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 228; ----------yAmCtAmC ; cor=0.791; Ncor=0.632; logoDP=0.024; NsEucl=0.883; NSW=0.890; rcor=157; rNcor=117; rlogoDP=442; rNsEucl=245; rNSW=179; rank_mean=228.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 3 0 1 5 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 2 5 1 0 3 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 1

AtMYB42_II_AtMYB42_II_AthaMYB_rc_shift10 (AtMYB42_II:AtMYB42_II:AthaMYB_rc) 0.781 0.625 0.200 0.881 0.887 172 129 393 255 193 228.400
; 1_m4_assembly_4 versus AtMYB42_II_AtMYB42_II_AthaMYB_rc (AtMYB42_II:AtMYB42_II:AthaMYB_rc); m=53/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 228.4; ----------yAMChACy ; cor=0.781; Ncor=0.625; logoDP=0.200; NsEucl=0.881; NSW=0.887; rcor=172; rNcor=129; rlogoDP=393; rNsEucl=255; rNSW=193; rank_mean=228.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 8 6 0 2 7 1.14 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 8 2 0 5.71 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.14 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 1 0 3

MYB83_B73_1_m1_EEAD0449_EEADannot_rc_shift4 (MYB83_B73_1_m1:EEAD0449:EEADannot_rc) 0.760 0.507 0.385 0.897 0.893 228 282 355 121 159 229.000
; 1_m4_assembly_4 versus MYB83_B73_1_m1_EEAD0449_EEADannot_rc (MYB83_B73_1_m1:EEAD0449:EEADannot_rc); m=54/108; ncol2=15; w=-4; offset=-4; strand=R; shift=4; score= 229; ----mmyycCCAMCyAMC ; cor=0.760; Ncor=0.507; logoDP=0.385; NsEucl=0.897; NSW=0.893; rcor=228; rNcor=282; rlogoDP=355; rNsEucl=121; rNSW=159; rank_mean=229.000; match_rank= a 0 0 0 0 41 37 13 23 16 10 0 100 68 0 5 94 28 3 c 0 0 0 0 27 37 43 39 55 70 81 0 32 100 39 0 71 76 g 0 0 0 0 10 8 12 10 14 4 0 0 0 0 1 3 0 0 t 0 0 0 0 22 18 32 28 15 16 19 0 0 0 55 3 1 21

MYB80_MA1778.2_JASPAR_shift8 (MYB80:MA1778.2:JASPAR) 0.712 0.593 7.101 0.888 0.875 395 173 120 190 273 230.200
; 1_m4_assembly_4 versus MYB80_MA1778.2_JASPAR (MYB80:MA1778.2:JASPAR); m=55/108; ncol2=12; w=0; offset=0; strand=D; shift=8; score= 230.2; --------tyyACCTAmy ; cor=0.712; Ncor=0.593; logoDP=7.101; NsEucl=0.888; NSW=0.875; rcor=395; rNcor=173; rlogoDP=120; rNsEucl=190; rNSW=273; rank_mean=230.200; match_rank= a 0 0 0 0 0 0 0 0 62 101 62 998 229 0 212 1000 627 81 c 0 0 0 0 0 0 0 0 242 297 471 0 771 1000 8 0 371 392 g 0 0 0 0 0 0 0 0 136 64 66 0 0 0 5 0 0 8 t 0 0 0 0 0 0 0 0 560 538 402 2 0 0 775 0 2 519

MYB39_MA1769.2_JASPAR_shift8 (MYB39:MA1769.2:JASPAR) 0.713 0.594 7.522 0.887 0.872 390 170 108 203 297 233.600
; 1_m4_assembly_4 versus MYB39_MA1769.2_JASPAR (MYB39:MA1769.2:JASPAR); m=56/108; ncol2=12; w=0; offset=0; strand=D; shift=8; score= 233.6; --------yyyACCTAmy ; cor=0.713; Ncor=0.594; logoDP=7.522; NsEucl=0.887; NSW=0.872; rcor=390; rNcor=170; rlogoDP=108; rNsEucl=203; rNSW=297; rank_mean=233.600; match_rank= a 0 0 0 0 0 0 0 0 50 67 34 993 138 0 169 1000 554 46 c 0 0 0 0 0 0 0 0 309 352 670 0 856 1000 0 0 439 470 g 0 0 0 0 0 0 0 0 94 74 17 7 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 547 508 279 0 5 0 831 0 7 484

AtMYB67_II_AtMYB67_II_AthaMYB_rc_shift10 (AtMYB67_II:AtMYB67_II:AthaMYB_rc) 0.779 0.623 0.223 0.880 0.884 179 131 386 263 212 234.200
; 1_m4_assembly_4 versus AtMYB67_II_AtMYB67_II_AthaMYB_rc (AtMYB67_II:AtMYB67_II:AthaMYB_rc); m=57/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 234.2; ----------YAACyAmy ; cor=0.779; Ncor=0.623; logoDP=0.223; NsEucl=0.880; NSW=0.884; rcor=179; rNcor=131; rlogoDP=386; rNsEucl=263; rNSW=212; rank_mean=234.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 7 7 0 1 6 3 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 7 2 0 3 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 5 0 0 0 4 1 0 3

AtMYB8_II_AtMYB8_II_AthaMYB_rc_shift10 (AtMYB8_II:AtMYB8_II:AthaMYB_rc) 0.774 0.619 0.272 0.879 0.884 191 134 371 264 214 234.800
; 1_m4_assembly_4 versus AtMYB8_II_AtMYB8_II_AthaMYB_rc (AtMYB8_II:AtMYB8_II:AthaMYB_rc); m=58/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 234.8; ----------yAACyAvy ; cor=0.774; Ncor=0.619; logoDP=0.272; NsEucl=0.879; NSW=0.884; rcor=191; rNcor=134; rlogoDP=371; rNsEucl=264; rNSW=214; rank_mean=234.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 4 1.25 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 5 2 0 2.50 2.50 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.25 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 2 1 0 2.50

MYB99_MA2008.2_JASPAR_shift10 (MYB99:MA2008.2:JASPAR) 0.752 0.602 9.145 0.867 0.858 253 157 40 360 364 234.800
; 1_m4_assembly_4 versus MYB99_MA2008.2_JASPAR (MYB99:MA2008.2:JASPAR); m=59/108; ncol2=8; w=0; offset=2; strand=D; shift=10; score= 234.8; ----------CACCTAmy ; cor=0.752; Ncor=0.602; logoDP=9.145; NsEucl=0.867; NSW=0.858; rcor=253; rNcor=157; rlogoDP=40; rNsEucl=360; rNSW=364; rank_mean=234.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 987 0 0 1 1020 535 140 c 0 0 0 0 0 0 0 0 0 0 1023 1 1004 1022 0 3 372 471 g 0 0 0 0 0 0 0 0 0 0 0 26 11 1 12 0 32 35 t 0 0 0 0 0 0 0 0 0 0 0 9 8 0 1010 0 84 377

AtMYB27_II_AtMYB27_II_AthaMYB_rc_shift10 (AtMYB27_II:AtMYB27_II:AthaMYB_rc) 0.773 0.618 0.244 0.878 0.882 195 136 380 270 225 241.200
; 1_m4_assembly_4 versus AtMYB27_II_AtMYB27_II_AthaMYB_rc (AtMYB27_II:AtMYB27_II:AthaMYB_rc); m=60/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 241.2; ----------yAACyAmy ; cor=0.773; Ncor=0.618; logoDP=0.244; NsEucl=0.878; NSW=0.882; rcor=195; rNcor=136; rlogoDP=380; rNsEucl=270; rNSW=225; rank_mean=241.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 6 0 1 5 2.40 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 6 2 0 2.40 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.20 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 3 1 0 2

AtMYB10_II_AtMYB10_II_AthaMYB_rc_shift10 (AtMYB10_II:AtMYB10_II:AthaMYB_rc) 0.766 0.613 0.217 0.878 0.880 209 140 389 275 233 249.200
; 1_m4_assembly_4 versus AtMYB10_II_AtMYB10_II_AthaMYB_rc (AtMYB10_II:AtMYB10_II:AthaMYB_rc); m=61/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 249.2; ----------yAMChACY ; cor=0.766; Ncor=0.613; logoDP=0.217; NsEucl=0.878; NSW=0.880; rcor=209; rNcor=140; rlogoDP=389; rNsEucl=275; rNSW=233; rank_mean=249.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 7 5 0 2 6 1 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 7 2 0 5 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 1 0 2

AtMYB0_I_AtMYB0_I_AthaMYB_rc_shift10 (AtMYB0_I:AtMYB0_I:AthaMYB_rc) 0.762 0.609 0.394 0.876 0.878 224 146 353 284 244 250.200
; 1_m4_assembly_4 versus AtMYB0_I_AtMYB0_I_AthaMYB_rc (AtMYB0_I:AtMYB0_I:AthaMYB_rc); m=62/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 250.2; ----------yAACTkwt ; cor=0.762; Ncor=0.609; logoDP=0.394; NsEucl=0.876; NSW=0.878; rcor=224; rNcor=146; rlogoDP=353; rNsEucl=284; rNSW=244; rank_mean=250.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 1 2 1 c 0 0 0 0 0 0 0 0 0 0 2 0 0 5 0 0 0 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 2 2 3

AtMYB95_II_AtMYB95_II_AthaMYB_rc_shift10 (AtMYB95_II:AtMYB95_II:AthaMYB_rc) 0.766 0.613 0.219 0.877 0.880 211 142 387 277 235 250.400
; 1_m4_assembly_4 versus AtMYB95_II_AtMYB95_II_AthaMYB_rc (AtMYB95_II:AtMYB95_II:AthaMYB_rc); m=63/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 250.4; ----------yAAChAmY ; cor=0.766; Ncor=0.613; logoDP=0.219; NsEucl=0.877; NSW=0.880; rcor=211; rNcor=142; rlogoDP=387; rNsEucl=277; rNSW=235; rank_mean=250.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 7 6 0 2 6 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 7 2 0 4 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 3 1 0 2

MYB39_MA1769.1_JASPAR_shift7 (MYB39:MA1769.1:JASPAR) 0.713 0.509 7.522 0.887 0.872 392 280 107 204 298 256.200
; 1_m4_assembly_4 versus MYB39_MA1769.1_JASPAR (MYB39:MA1769.1:JASPAR); m=64/108; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score= 256.2; -------tyyyACCTAmy ; cor=0.713; Ncor=0.509; logoDP=7.522; NsEucl=0.887; NSW=0.872; rcor=392; rNcor=280; rlogoDP=107; rNsEucl=204; rNSW=298; rank_mean=256.200; match_rank= a 0 0 0 0 0 0 0 157 49.573 66.667 34.188 993 138 0 169 1000 554 46.154 c 0 0 0 0 0 0 0 169 309 352 670 0 856.41 1000 0 0 439 470 g 0 0 0 0 0 0 0 197 94.017 73.504 17.094 6.838 0 0 0 0 0 0 t 0 0 0 0 0 0 0 477 547 508 279 0 5.128 0 831 0 6.838 484

MYB80_MA1778.1_JASPAR_shift7 (MYB80:MA1778.1:JASPAR) 0.712 0.474 7.102 0.888 0.875 397 321 119 191 274 260.400
; 1_m4_assembly_4 versus MYB80_MA1778.1_JASPAR (MYB80:MA1778.1:JASPAR); m=65/108; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score= 260.4; -------ktyyACCTAmy ; cor=0.712; Ncor=0.474; logoDP=7.102; NsEucl=0.888; NSW=0.875; rcor=397; rNcor=321; rlogoDP=119; rNsEucl=191; rNSW=274; rank_mean=260.400; match_rank= a 0 0 0 0 0 0 0 158 62.185 100.84 62.185 998 229 0 212 1000 627 80.672 c 0 0 0 0 0 0 0 153 242 297 471 0 771 1000 8.403 0 371 392 g 0 0 0 0 0 0 0 318 136 63.866 65.546 0 0 0 5.042 0 0 8.403 t 0 0 0 0 0 0 0 371 560 538 402 1.681 0 0 774.79 0 1.681 519

AtMYB50_II_AtMYB50_II_AthaMYB_rc_shift10 (AtMYB50_II:AtMYB50_II:AthaMYB_rc) 0.761 0.609 0.240 0.875 0.876 225 147 384 293 257 261.200
; 1_m4_assembly_4 versus AtMYB50_II_AtMYB50_II_AthaMYB_rc (AtMYB50_II:AtMYB50_II:AthaMYB_rc); m=66/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 261.2; ----------yAmCwAmC ; cor=0.761; Ncor=0.609; logoDP=0.240; NsEucl=0.875; NSW=0.876; rcor=225; rNcor=147; rlogoDP=384; rNsEucl=293; rNSW=257; rank_mean=261.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 4 0 2 5 2.40 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 6 1 0 2.40 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.20 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 1 0 0

AtMYB53_II_AtMYB53_II_AthaMYB_rc_shift10 (AtMYB53_II:AtMYB53_II:AthaMYB_rc) 0.777 0.622 0.023 0.876 0.877 187 133 452 288 250 262.000
; 1_m4_assembly_4 versus AtMYB53_II_AtMYB53_II_AthaMYB_rc (AtMYB53_II:AtMYB53_II:AthaMYB_rc); m=67/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 262; ----------YAmCWAmC ; cor=0.777; Ncor=0.622; logoDP=0.023; NsEucl=0.876; NSW=0.877; rcor=187; rNcor=133; rlogoDP=452; rNsEucl=288; rNSW=250; rank_mean=262.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 2 0 1 4 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 2 4 0 0 2 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 3 0 0 0

AtMYB101_II_AtMYB101_II_AthaMYB_rc_shift10 (AtMYB101_II:AtMYB101_II:AthaMYB_rc) 0.794 0.635 0.025 0.872 0.868 150 111 431 325 311 265.600
; 1_m4_assembly_4 versus AtMYB101_II_AtMYB101_II_AthaMYB_rc (AtMYB101_II:AtMYB101_II:AthaMYB_rc); m=68/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 265.6; ----------yAACTAAC ; cor=0.794; Ncor=0.635; logoDP=0.025; NsEucl=0.872; NSW=0.868; rcor=150; rNcor=111; rlogoDP=431; rNsEucl=325; rNSW=311; rank_mean=265.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 2 2 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0

AtMYB39_II_AtMYB39_II_AthaMYB_rc_shift10 (AtMYB39_II:AtMYB39_II:AthaMYB_rc) 0.772 0.618 0.023 0.875 0.876 197 137 446 295 260 267.000
; 1_m4_assembly_4 versus AtMYB39_II_AtMYB39_II_AthaMYB_rc (AtMYB39_II:AtMYB39_II:AthaMYB_rc); m=69/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 267; ----------yAmCwAsC ; cor=0.772; Ncor=0.618; logoDP=0.023; NsEucl=0.875; NSW=0.876; rcor=197; rNcor=137; rlogoDP=446; rNsEucl=295; rNSW=260; rank_mean=267.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 2 0 1 3 0 0 c 0 0 0 0 0 0 0 0 0 0 2 0 1 3 0 0 1.50 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.50 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0

hhwccACCAACCAchw_EEAD0570_EEADannot_shift2 (hhwccACCAACCAchw:EEAD0570:EEADannot) 0.724 0.426 6.452 0.888 0.875 343 403 129 189 271 267.000
; 1_m4_assembly_4 versus hhwccACCAACCAchw_EEAD0570_EEADannot (hhwccACCAACCAchw:EEAD0570:EEADannot); m=70/108; ncol2=17; w=-6; offset=-6; strand=D; shift=2; score= 267; ---hhwccACCAACCAch ; cor=0.724; Ncor=0.426; logoDP=6.452; NsEucl=0.888; NSW=0.875; rcor=343; rNcor=403; rlogoDP=129; rNsEucl=189; rNSW=271; rank_mean=267.000; match_rank= a 0 0 - 870 925 1046 501 430 2097 338 32 2472 2531 125 259 2339 529 890 c 0 0 - 724 783 604 1370 1575 200 2229 2566 113 105 2541 2201 108 1800 895 g 0 0 0 395 330 305 289 181 117 66 16 31 50 18 37 149 82 227 t 0 0 0 750 701 784 579 553 325 106 125 123 53 55 242 143 328 727

AtMYB77_II_AtMYB77_II_AthaMYB_rc_shift10 (AtMYB77_II:AtMYB77_II:AthaMYB_rc) 0.758 0.607 0.288 0.874 0.874 235 151 368 306 285 269.000
; 1_m4_assembly_4 versus AtMYB77_II_AtMYB77_II_AthaMYB_rc (AtMYB77_II:AtMYB77_II:AthaMYB_rc); m=71/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 269; ----------TAACTahy ; cor=0.758; Ncor=0.607; logoDP=0.288; NsEucl=0.874; NSW=0.874; rcor=235; rNcor=151; rlogoDP=368; rNsEucl=306; rNSW=285; rank_mean=269.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 3 1.67 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 5 1 0 1.67 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 1 1.67 2

AtMYB9_II_AtMYB9_II_AthaMYB_rc_shift10 (AtMYB9_II:AtMYB9_II:AthaMYB_rc) 0.754 0.603 0.241 0.875 0.875 251 156 383 301 278 273.800
; 1_m4_assembly_4 versus AtMYB9_II_AtMYB9_II_AthaMYB_rc (AtMYB9_II:AtMYB9_II:AthaMYB_rc); m=72/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 273.8; ----------yAmCwAsy ; cor=0.754; Ncor=0.603; logoDP=0.241; NsEucl=0.875; NSW=0.875; rcor=251; rNcor=156; rlogoDP=383; rNsEucl=301; rNSW=278; rank_mean=273.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 4 0 2 5 0 0 c 0 0 0 0 0 0 0 0 0 0 3 0 2 6 1 0 4 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 1 0 2

AtMYB46_II_AtMYB46_II_AthaMYB_rc_shift10 (AtMYB46_II:AtMYB46_II:AthaMYB_rc) 0.756 0.605 0.025 0.873 0.870 240 153 431 317 302 288.600
; 1_m4_assembly_4 versus AtMYB46_II_AtMYB46_II_AthaMYB_rc (AtMYB46_II:AtMYB46_II:AthaMYB_rc); m=73/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 288.6; ----------yAmCWAMY ; cor=0.756; Ncor=0.605; logoDP=0.025; NsEucl=0.873; NSW=0.870; rcor=240; rNcor=153; rlogoDP=431; rNsEucl=317; rNSW=302; rank_mean=288.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 2 0 1 4 1 0 c 0 0 0 0 0 0 0 0 0 0 2 0 2 4 0 0 3 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 1

JGL_UN0403.2_JASPAR_rc_shift11 (JGL:UN0403.2:JASPAR_rc) 0.775 0.417 1.743 0.871 0.884 190 417 304 331 213 291.000
; 1_m4_assembly_4 versus JGL_UN0403.2_JASPAR_rc (JGL:UN0403.2:JASPAR_rc); m=74/108; ncol2=10; w=0; offset=3; strand=R; shift=11; score= 291; -----------AACTGra ; cor=0.775; Ncor=0.417; logoDP=1.743; NsEucl=0.871; NSW=0.884; rcor=190; rNcor=417; rlogoDP=304; rNsEucl=331; rNSW=213; rank_mean=291.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 923 993 0 0 85 382 563 c 0 0 0 0 0 0 0 0 0 0 0 27 0 988 30 87 237 190 g 0 0 0 0 0 0 0 0 0 0 0 47 0 12 7 815 267 40 t 0 0 0 0 0 0 0 0 0 0 0 3 7 0 963 13 115 207

AtMYB15_II_AtMYB15_II_AthaMYB_rc_shift10 (AtMYB15_II:AtMYB15_II:AthaMYB_rc) 0.760 0.608 0.026 0.871 0.866 227 148 429 337 326 293.400
; 1_m4_assembly_4 versus AtMYB15_II_AtMYB15_II_AthaMYB_rc (AtMYB15_II:AtMYB15_II:AthaMYB_rc); m=75/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 293.4; ----------CAmCwAvC ; cor=0.760; Ncor=0.608; logoDP=0.026; NsEucl=0.871; NSW=0.866; rcor=227; rNcor=148; rlogoDP=429; rNsEucl=337; rNSW=326; rank_mean=293.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 2 0 2 4 1 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 4 0 0 2 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0

AtMYB107_II_AtMYB107_II_AthaMYB_rc_shift10 (AtMYB107_II:AtMYB107_II:AthaMYB_rc) 0.751 0.601 0.028 0.872 0.869 257 160 425 322 309 294.600
; 1_m4_assembly_4 versus AtMYB107_II_AtMYB107_II_AthaMYB_rc (AtMYB107_II:AtMYB107_II:AthaMYB_rc); m=76/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 294.6; ----------yAAChAvy ; cor=0.751; Ncor=0.601; logoDP=0.028; NsEucl=0.872; NSW=0.869; rcor=257; rNcor=160; rlogoDP=425; rNsEucl=322; rNSW=309; rank_mean=294.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 3 1 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 3 1 0 1 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 1

AtMYB20_II_AtMYB20_II_AthaMYB_rc_shift10 (AtMYB20_II:AtMYB20_II:AthaMYB_rc) 0.740 0.592 0.310 0.871 0.866 298 175 364 334 321 298.400
; 1_m4_assembly_4 versus AtMYB20_II_AtMYB20_II_AthaMYB_rc (AtMYB20_II:AtMYB20_II:AthaMYB_rc); m=77/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 298.4; ----------yAAChWvY ; cor=0.740; Ncor=0.592; logoDP=0.310; NsEucl=0.871; NSW=0.866; rcor=298; rNcor=175; rlogoDP=364; rNsEucl=334; rNSW=321; rank_mean=298.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 3 1.33 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 2 0 1.33 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.33 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 1 0 1

AtMYB68_II_AtMYB68_II_AthaMYB_rc_shift10 (AtMYB68_II:AtMYB68_II:AthaMYB_rc) 0.759 0.607 0.025 0.869 0.864 233 150 431 344 337 299.000
; 1_m4_assembly_4 versus AtMYB68_II_AtMYB68_II_AthaMYB_rc (AtMYB68_II:AtMYB68_II:AthaMYB_rc); m=78/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 299; ----------yAmCTACy ; cor=0.759; Ncor=0.607; logoDP=0.025; NsEucl=0.869; NSW=0.864; rcor=233; rNcor=150; rlogoDP=431; rNsEucl=344; rNSW=337; rank_mean=299.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 2 0 0 c 0 0 0 0 0 0 0 0 0 0 1 0 1 2 0 0 2 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 1

WRKY28_MA1311.3_JASPAR_shift7 (WRKY28:MA1311.3:JASPAR) 0.778 0.424 6.174 0.849 0.864 183 408 143 427 336 299.400
; 1_m4_assembly_4 versus WRKY28_MA1311.3_JASPAR (WRKY28:MA1311.3:JASPAR); m=79/108; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 299.4; -------rGTCAAC---- ; cor=0.778; Ncor=0.424; logoDP=6.174; NsEucl=0.849; NSW=0.864; rcor=183; rNcor=408; rlogoDP=143; rNsEucl=427; rNSW=336; rank_mean=299.400; match_rank= a 0 0 0 0 0 0 0 919 21 6 12 2059 2050 158 0 0 0 0 c 0 0 0 0 0 0 0 67 11 8 2062 17 7 1730 0 0 0 0 g 0 0 0 0 0 0 0 924 2047 1 8 6 18 55 0 0 0 0 t 0 0 0 0 0 0 0 182 13 2077 10 10 17 149 0 0 0 0

AtMYB113_II_AtMYB113_II_AthaMYB_rc_shift10 (AtMYB113_II:AtMYB113_II:AthaMYB_rc) 0.750 0.600 0.031 0.871 0.866 258 161 424 334 321 299.600
; 1_m4_assembly_4 versus AtMYB113_II_AtMYB113_II_AthaMYB_rc (AtMYB113_II:AtMYB113_II:AthaMYB_rc); m=80/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 299.6; ----------YAAChAvY ; cor=0.750; Ncor=0.600; logoDP=0.031; NsEucl=0.871; NSW=0.866; rcor=258; rNcor=161; rlogoDP=424; rNsEucl=334; rNSW=321; rank_mean=299.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 4 1.33 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 4 1 0 1.33 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.33 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 2 0 0 1

AtMYB22_II_AtMYB22_II_AthaMYB_rc_shift10 (AtMYB22_II:AtMYB22_II:AthaMYB_rc) 0.755 0.604 0.025 0.868 0.862 246 154 431 350 346 305.400
; 1_m4_assembly_4 versus AtMYB22_II_AtMYB22_II_AthaMYB_rc (AtMYB22_II:AtMYB22_II:AthaMYB_rc); m=81/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 305.4; ----------yAACwArC ; cor=0.755; Ncor=0.604; logoDP=0.025; NsEucl=0.868; NSW=0.862; rcor=246; rNcor=154; rlogoDP=431; rNsEucl=350; rNSW=346; rank_mean=305.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 2 0 1 2 1 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0

MS188.DAP_M0515_AthalianaCistrome_rc_shift7 (MS188.DAP:M0515:AthalianaCistrome_rc) 0.712 0.474 0.603 0.888 0.875 399 322 340 192 275 305.600
; 1_m4_assembly_4 versus MS188.DAP_M0515_AthalianaCistrome_rc (MS188.DAP:M0515:AthalianaCistrome_rc); m=82/108; ncol2=15; w=-1; offset=-1; strand=R; shift=7; score= 305.6; -------ktyyACCTAmy ; cor=0.712; Ncor=0.474; logoDP=0.603; NsEucl=0.888; NSW=0.875; rcor=399; rNcor=322; rlogoDP=340; rNsEucl=192; rNSW=275; rank_mean=305.600; match_rank= a 0 0 0 0 0 0 0 94 37 60 37 594 136 0 126 595 373 48 c 0 0 0 0 0 0 0 91 144 177 280 0 459 595 5 0 221 233 g 0 0 0 0 0 0 0 189 81 38 39 0 0 0 3 0 0 5 t 0 0 0 0 0 0 0 221 333 320 239 1 0 0 461 0 1 309

AtMYB84_II_AtMYB84_II_AthaMYB_rc_shift10 (AtMYB84_II:AtMYB84_II:AthaMYB_rc) 0.778 0.467 5.765 0.833 0.833 184 337 162 450 433 313.200
; 1_m4_assembly_4 versus AtMYB84_II_AtMYB84_II_AthaMYB_rc (AtMYB84_II:AtMYB84_II:AthaMYB_rc); m=83/108; ncol2=6; w=0; offset=2; strand=R; shift=10; score= 313.2; ----------TAACTA-- ; cor=0.778; Ncor=0.467; logoDP=5.765; NsEucl=0.833; NSW=0.833; rcor=184; rNcor=337; rlogoDP=162; rNsEucl=450; rNSW=433; rank_mean=313.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0

AtMYB23_II_AtMYB23_II_AthaMYB_rc_shift10 (AtMYB23_II:AtMYB23_II:AthaMYB_rc) 0.737 0.590 0.310 0.866 0.857 309 179 364 362 365 315.800
; 1_m4_assembly_4 versus AtMYB23_II_AtMYB23_II_AthaMYB_rc (AtMYB23_II:AtMYB23_II:AthaMYB_rc); m=84/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 315.8; ----------yAAChWRC ; cor=0.737; Ncor=0.590; logoDP=0.310; NsEucl=0.866; NSW=0.857; rcor=309; rNcor=179; rlogoDP=364; rNsEucl=362; rNSW=365; rank_mean=315.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 3 3 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 1 0 0 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0

MYB39.DAP_M0557_AthalianaCistrome_rc_shift7 (MYB39.DAP:M0557:AthalianaCistrome_rc) 0.713 0.509 0.058 0.887 0.872 389 279 419 202 296 317.000
; 1_m4_assembly_4 versus MYB39.DAP_M0557_AthalianaCistrome_rc (MYB39.DAP:M0557:AthalianaCistrome_rc); m=85/108; ncol2=14; w=-1; offset=-1; strand=R; shift=7; score= 317; -------tyyyACCTAmy ; cor=0.713; Ncor=0.509; logoDP=0.058; NsEucl=0.887; NSW=0.872; rcor=389; rNcor=279; rlogoDP=419; rNsEucl=202; rNSW=296; rank_mean=317.000; match_rank= a 0 0 0 0 0 0 0 92 29 39 20 581 81 0 99 585 324 27 c 0 0 0 0 0 0 0 99 181 206 392 0 501 585 0 0 257 275 g 0 0 0 0 0 0 0 115 55 43 10 4 0 0 0 0 0 0 t 0 0 0 0 0 0 0 279 320 297 163 0 3 0 486 0 4 283

AtMYB66_II_AtMYB66_II_AthaMYB_rc_shift10 (AtMYB66_II:AtMYB66_II:AthaMYB_rc) 0.735 0.588 0.279 0.867 0.859 318 183 369 357 359 317.200
; 1_m4_assembly_4 versus AtMYB66_II_AtMYB66_II_AthaMYB_rc (AtMYB66_II:AtMYB66_II:AthaMYB_rc); m=86/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 317.2; ----------TAACyAmy ; cor=0.735; Ncor=0.588; logoDP=0.279; NsEucl=0.867; NSW=0.859; rcor=318; rNcor=183; rlogoDP=369; rNsEucl=357; rNSW=359; rank_mean=317.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 4 2.50 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 5 2 0 2.50 2.50 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 3 1 0 2.50

AtMYB89_II_AtMYB89_II_AthaMYB_rc_shift10 (AtMYB89_II:AtMYB89_II:AthaMYB_rc) 0.728 0.582 0.269 0.869 0.862 337 194 373 348 345 319.400
; 1_m4_assembly_4 versus AtMYB89_II_AtMYB89_II_AthaMYB_rc (AtMYB89_II:AtMYB89_II:AthaMYB_rc); m=87/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 319.4; ----------yAACmAvC ; cor=0.728; Ncor=0.582; logoDP=0.269; NsEucl=0.869; NSW=0.862; rcor=337; rNcor=194; rlogoDP=373; rNsEucl=348; rNSW=345; rank_mean=319.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 4 0 2 4 1.25 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 5 2 0 2.50 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.25 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 1 0 1

AtMYB26_II_AtMYB26_II_AthaMYB_rc_shift10 (AtMYB26_II:AtMYB26_II:AthaMYB_rc) 0.746 0.597 0.028 0.865 0.855 273 166 425 366 368 319.600
; 1_m4_assembly_4 versus AtMYB26_II_AtMYB26_II_AthaMYB_rc (AtMYB26_II:AtMYB26_II:AthaMYB_rc); m=88/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 319.6; ----------yAACwArC ; cor=0.746; Ncor=0.597; logoDP=0.028; NsEucl=0.865; NSW=0.855; rcor=273; rNcor=166; rlogoDP=425; rNsEucl=366; rNSW=368; rank_mean=319.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 3 1.50 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.50 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 0

AtMYB5_II_AtMYB5_II_AthaMYB_rc_shift10 (AtMYB5_II:AtMYB5_II:AthaMYB_rc) 0.727 0.581 0.317 0.867 0.858 341 195 363 358 362 323.800
; 1_m4_assembly_4 versus AtMYB5_II_AtMYB5_II_AthaMYB_rc (AtMYB5_II:AtMYB5_II:AthaMYB_rc); m=89/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 323.8; ----------YAAChWvY ; cor=0.727; Ncor=0.581; logoDP=0.317; NsEucl=0.867; NSW=0.858; rcor=341; rNcor=195; rlogoDP=363; rNsEucl=358; rNSW=362; rank_mean=323.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 3 1.33 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 4 1 0 1.33 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.33 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 2 1 0 1

AtMYB78_II_AtMYB78_II_AthaMYB_rc_shift10 (AtMYB78_II:AtMYB78_II:AthaMYB_rc) 0.728 0.582 0.370 0.865 0.855 336 193 357 366 368 324.000
; 1_m4_assembly_4 versus AtMYB78_II_AtMYB78_II_AthaMYB_rc (AtMYB78_II:AtMYB78_II:AthaMYB_rc); m=90/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 324; ----------yAAChwrC ; cor=0.728; Ncor=0.582; logoDP=0.370; NsEucl=0.865; NSW=0.855; rcor=336; rNcor=193; rlogoDP=357; rNsEucl=366; rNSW=368; rank_mean=324.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 2 1.50 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 3 1 0 0 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.50 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0

AtMYB114_II_AtMYB114_II_AthaMYB_rc_shift10 (AtMYB114_II:AtMYB114_II:AthaMYB_rc) 0.737 0.590 0.028 0.868 0.860 311 181 425 355 354 325.200
; 1_m4_assembly_4 versus AtMYB114_II_AtMYB114_II_AthaMYB_rc (AtMYB114_II:AtMYB114_II:AthaMYB_rc); m=91/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 325.2; ----------yAAChAsy ; cor=0.737; Ncor=0.590; logoDP=0.028; NsEucl=0.868; NSW=0.860; rcor=311; rNcor=181; rlogoDP=425; rNsEucl=355; rNSW=354; rank_mean=325.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 3 0 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 3 1 0 1.50 1.50 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.50 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 1.50

MYB83_MA1779.2_JASPAR_shift7 (MYB83:MA1779.2:JASPAR) 0.727 0.463 4.947 0.858 0.859 339 342 190 403 360 326.800
; 1_m4_assembly_4 versus MYB83_MA1779.2_JASPAR (MYB83:MA1779.2:JASPAR); m=92/108; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 326.8; -------CACCAACm--- ; cor=0.727; Ncor=0.463; logoDP=4.947; NsEucl=0.858; NSW=0.859; rcor=339; rNcor=342; rlogoDP=190; rNsEucl=403; rNSW=360; rank_mean=326.800; match_rank= a 0 0 0 0 0 0 0 109 1000 232 0 849 823 184 291 0 0 0 c 0 0 0 0 0 0 0 811 0 759 993 14 125 801 489 0 0 0 g 0 0 0 0 0 0 0 5 0 9 0 7 52 14 17 0 0 0 t 0 0 0 0 0 0 0 76 0 0 7 130 0 0 203 0 0 0

LOC_Os08g37970.1_MYB_2_AT1G34670_EEAD0633_EEADannot_rc_shift10 (LOC_Os08g37970.1_MYB_2_AT1G34670:EEAD0633:EEADannot_rc) 0.733 0.586 0.018 0.868 0.861 322 189 454 353 349 333.400
; 1_m4_assembly_4 versus LOC_Os08g37970.1_MYB_2_AT1G34670_EEAD0633_EEADannot_rc (LOC_Os08g37970.1_MYB_2_AT1G34670:EEAD0633:EEADannot_rc); m=93/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 333.4; ----------yACCTAmy ; cor=0.733; Ncor=0.586; logoDP=0.018; NsEucl=0.868; NSW=0.861; rcor=322; rNcor=189; rlogoDP=454; rNsEucl=353; rNSW=349; rank_mean=333.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 6 100 21 0 22 100 49 1 c 0 0 0 0 0 0 0 0 0 0 58 0 79 100 7 0 51 44 g 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 33 0 0 0 71 0 0 55

AtMYB63_II_AtMYB63_II_AthaMYB_rc_shift10 (AtMYB63_II:AtMYB63_II:AthaMYB_rc) 0.736 0.589 0.023 0.867 0.858 313 182 452 359 363 333.800
; 1_m4_assembly_4 versus AtMYB63_II_AtMYB63_II_AthaMYB_rc (AtMYB63_II:AtMYB63_II:AthaMYB_rc); m=94/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 333.8; ----------YAmCwAvC ; cor=0.736; Ncor=0.589; logoDP=0.023; NsEucl=0.867; NSW=0.858; rcor=313; rNcor=182; rlogoDP=452; rNsEucl=359; rNSW=363; rank_mean=333.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 2 0 2 4 1 0 c 0 0 0 0 0 0 0 0 0 0 3 0 2 4 0 0 2 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0

AtMYB58_II_AtMYB58_II_AthaMYB_rc_shift10 (AtMYB58_II:AtMYB58_II:AthaMYB_rc) 0.738 0.590 0.026 0.863 0.849 307 178 429 375 390 335.800
; 1_m4_assembly_4 versus AtMYB58_II_AtMYB58_II_AthaMYB_rc (AtMYB58_II:AtMYB58_II:AthaMYB_rc); m=95/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 335.8; ----------CAmCwAmC ; cor=0.738; Ncor=0.590; logoDP=0.026; NsEucl=0.863; NSW=0.849; rcor=307; rNcor=178; rlogoDP=429; rNsEucl=375; rNSW=390; rank_mean=335.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 1 0 1 3 1 0 c 0 0 0 0 0 0 0 0 0 0 3 0 2 3 0 0 2 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0

AtMYB63_I_AtMYB63_I_AthaMYB_rc_shift10 (AtMYB63_I:AtMYB63_I:AthaMYB_rc) 0.715 0.572 0.392 0.862 0.847 376 204 354 383 395 342.400
; 1_m4_assembly_4 versus AtMYB63_I_AtMYB63_I_AthaMYB_rc (AtMYB63_I:AtMYB63_I:AthaMYB_rc); m=96/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 342.4; ----------YAACTddY ; cor=0.715; Ncor=0.572; logoDP=0.392; NsEucl=0.862; NSW=0.847; rcor=376; rNcor=204; rlogoDP=354; rNsEucl=383; rNSW=395; rank_mean=342.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 1 2 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 0 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 2 1 3

WRKY75_MA1093.2_JASPAR_shift7 (WRKY75:MA1093.2:JASPAR) 0.739 0.403 6.249 0.838 0.843 301 449 138 442 406 347.200
; 1_m4_assembly_4 versus WRKY75_MA1093.2_JASPAR (WRKY75:MA1093.2:JASPAR); m=97/108; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 347.2; -------rGTCAAm---- ; cor=0.739; Ncor=0.403; logoDP=6.249; NsEucl=0.838; NSW=0.843; rcor=301; rNcor=449; rlogoDP=138; rNsEucl=442; rNSW=406; rank_mean=347.200; match_rank= a 0 0 0 0 0 0 0 500 0 0 0 1000 1000 260 0 0 0 0 c 0 0 0 0 0 0 0 17 0 0 1000 0 0 620 0 0 0 0 g 0 0 0 0 0 0 0 483 1000 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 1000 0 0 0 120 0 0 0 0

ZFP5_M0369_1.02_CISBP_shift7 (ZFP5:M0369_1.02:CISBP) 0.732 0.466 1.634 0.857 0.856 326 338 308 412 366 350.000
; 1_m4_assembly_4 versus ZFP5_M0369_1.02_CISBP (ZFP5:M0369_1.02:CISBP); m=98/108; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 350; -------wkbdAwst--- ; cor=0.732; Ncor=0.466; logoDP=1.634; NsEucl=0.857; NSW=0.856; rcor=326; rNcor=338; rlogoDP=308; rNsEucl=412; rNSW=366; rank_mean=350.000; match_rank= a 0 0 0 0 0 0 0 25 21 23 26 76 65 5 19 0 0 0 c 0 0 0 0 0 0 0 24 24 25 18 4 0 53 22 0 0 0 g 0 0 0 0 0 0 0 24 27 25 31 9 6 40 7 0 0 0 t 0 0 0 0 0 0 0 27 28 27 25 11 29 2 52 0 0 0

NAC057_MA2034.2_JASPAR_shift10 (NAC057:MA2034.2:JASPAR) 0.705 0.494 6.163 0.839 0.818 423 294 144 440 450 350.200
; 1_m4_assembly_4 versus NAC057_MA2034.2_JASPAR (NAC057:MA2034.2:JASPAR); m=99/108; ncol2=7; w=0; offset=2; strand=D; shift=10; score= 350.2; ----------CAAGTAA- ; cor=0.705; Ncor=0.494; logoDP=6.163; NsEucl=0.839; NSW=0.818; rcor=423; rNcor=294; rlogoDP=144; rNsEucl=440; rNSW=450; rank_mean=350.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 36 2461 2158 30 33 2146 2337 0 c 0 0 0 0 0 0 0 0 0 0 2380 36 269 8 95 54 55 0 g 0 0 0 0 0 0 0 0 0 0 22 35 61 2524 42 10 35 0 t 0 0 0 0 0 0 0 0 0 0 144 50 94 20 2412 372 155 0

WRKY60_MA1090.2_JASPAR_shift7 (WRKY60:MA1090.2:JASPAR) 0.738 0.402 6.145 0.838 0.843 306 452 146 443 407 350.800
; 1_m4_assembly_4 versus WRKY60_MA1090.2_JASPAR (WRKY60:MA1090.2:JASPAR); m=100/108; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 350.8; -------GGTCAAm---- ; cor=0.738; Ncor=0.402; logoDP=6.145; NsEucl=0.838; NSW=0.843; rcor=306; rNcor=452; rlogoDP=146; rNsEucl=443; rNSW=407; rank_mean=350.800; match_rank= a 0 0 0 0 0 0 0 136 0 0 0 1000 1000 258 0 0 0 0 c 0 0 0 0 0 0 0 22 0 0 1000 0 0 608 0 0 0 0 g 0 0 0 0 0 0 0 820 1000 0 0 0 0 67 0 0 0 0 t 0 0 0 0 0 0 0 22 0 1000 0 0 0 67 0 0 0 0

AtMYB87_II_AtMYB87_II_AthaMYB_rc_shift10 (AtMYB87_II:AtMYB87_II:AthaMYB_rc) 0.731 0.585 0.052 0.858 0.839 330 191 420 400 419 352.000
; 1_m4_assembly_4 versus AtMYB87_II_AtMYB87_II_AthaMYB_rc (AtMYB87_II:AtMYB87_II:AthaMYB_rc); m=101/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 352; ----------TAACTAmy ; cor=0.731; Ncor=0.585; logoDP=0.052; NsEucl=0.858; NSW=0.839; rcor=330; rNcor=191; rlogoDP=420; rNsEucl=400; rNSW=419; rank_mean=352.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 2 1 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 1

AtMYB41_II_AtMYB41_II_AthaMYB_rc_shift10 (AtMYB41_II:AtMYB41_II:AthaMYB_rc) 0.707 0.566 0.279 0.862 0.849 417 212 369 377 391 353.200
; 1_m4_assembly_4 versus AtMYB41_II_AtMYB41_II_AthaMYB_rc (AtMYB41_II:AtMYB41_II:AthaMYB_rc); m=102/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 353.2; ----------TAACyAvy ; cor=0.707; Ncor=0.566; logoDP=0.279; NsEucl=0.862; NSW=0.849; rcor=417; rNcor=212; rlogoDP=369; rNsEucl=377; rNSW=391; rank_mean=353.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 4 1.25 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 5 2 0 2.50 2.50 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.25 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 2 1 0 2.50

NAC017_MA1674.3_JASPAR_shift10 (NAC017:MA1674.3:JASPAR) 0.701 0.491 6.463 0.837 0.814 448 299 128 448 453 355.200
; 1_m4_assembly_4 versus NAC017_MA1674.3_JASPAR (NAC017:MA1674.3:JASPAR); m=103/108; ncol2=7; w=0; offset=2; strand=D; shift=10; score= 355.2; ----------CAAGTAA- ; cor=0.701; Ncor=0.491; logoDP=6.463; NsEucl=0.837; NSW=0.814; rcor=448; rNcor=299; rlogoDP=128; rNsEucl=448; rNSW=453; rank_mean=355.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 12 990 879 9 127 917 928 0 c 0 0 0 0 0 0 0 0 0 0 957 1 92 4 72 24 4 0 g 0 0 0 0 0 0 0 0 0 0 9 0 7 978 60 6 6 0 t 0 0 0 0 0 0 0 0 0 0 19 6 19 6 738 50 59 0

WRKY53_MA1805.2_JASPAR_shift7 (WRKY53:MA1805.2:JASPAR) 0.735 0.401 4.478 0.843 0.853 319 453 203 435 377 357.400
; 1_m4_assembly_4 versus WRKY53_MA1805.2_JASPAR (WRKY53:MA1805.2:JASPAR); m=104/108; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 357.4; -------rGTCAAC---- ; cor=0.735; Ncor=0.401; logoDP=4.478; NsEucl=0.843; NSW=0.853; rcor=319; rNcor=453; rlogoDP=203; rNsEucl=435; rNSW=377; rank_mean=357.400; match_rank= a 0 0 0 0 0 0 0 426 8 0 46 896 896 85 0 0 0 0 c 0 0 0 0 0 0 0 115 0 0 950 56 8 706 0 0 0 0 g 0 0 0 0 0 0 0 402 980 1 1 10 76 56 0 0 0 0 t 0 0 0 0 0 0 0 57 12 998 2 39 21 153 0 0 0 0

ZFP8_M0371_1.02_CISBP_rc_shift6 (ZFP8:M0371_1.02:CISBP_rc) 0.758 0.442 0.048 0.855 0.854 238 377 422 416 374 365.400
; 1_m4_assembly_4 versus ZFP8_M0371_1.02_CISBP_rc (ZFP8:M0371_1.02:CISBP_rc); m=105/108; ncol2=9; w=-2; offset=-2; strand=R; shift=6; score= 365.4; ------rhkbdawsw--- ; cor=0.758; Ncor=0.442; logoDP=0.048; NsEucl=0.855; NSW=0.854; rcor=238; rNcor=377; rlogoDP=422; rNsEucl=416; rNSW=374; rank_mean=365.400; match_rank= a 0 0 0 0 0 0 29 26 23 23 26 66 65 8 26 0 0 0 c 0 0 0 0 0 0 22 26 24 25 19 10 0 56 14 0 0 0 g 0 0 0 0 0 0 25 23 26 25 29 10 8 32 14 0 0 0 t 0 0 0 0 0 0 24 25 27 27 26 14 27 4 46 0 0 0

NAC002_MA2015.2_JASPAR_shift7 (NAC002:MA2015.2:JASPAR) 0.702 0.447 4.639 0.850 0.842 445 369 198 425 409 369.200
; 1_m4_assembly_4 versus NAC002_MA2015.2_JASPAR (NAC002:MA2015.2:JASPAR); m=106/108; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 369.2; -------ACGcAACT--- ; cor=0.702; Ncor=0.447; logoDP=4.639; NsEucl=0.850; NSW=0.842; rcor=445; rNcor=369; rlogoDP=198; rNsEucl=425; rNSW=409; rank_mean=369.200; match_rank= a 0 0 0 0 0 0 0 1143 31 38 47 1066 1070 26 69 0 0 0 c 0 0 0 0 0 0 0 12 1096 13 753 58 16 1013 144 0 0 0 g 0 0 0 0 0 0 0 3 14 1089 103 13 16 64 63 0 0 0 t 0 0 0 0 0 0 0 11 28 29 266 32 67 66 893 0 0 0

AtMYB76_II_AtMYB76_II_AthaMYB_rc_shift10 (AtMYB76_II:AtMYB76_II:AthaMYB_rc) 0.702 0.562 0.023 0.857 0.836 442 215 446 407 426 387.200
; 1_m4_assembly_4 versus AtMYB76_II_AtMYB76_II_AthaMYB_rc (AtMYB76_II:AtMYB76_II:AthaMYB_rc); m=107/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 387.2; ----------yAmCwACy ; cor=0.702; Ncor=0.562; logoDP=0.023; NsEucl=0.857; NSW=0.836; rcor=442; rNcor=215; rlogoDP=446; rNsEucl=407; rNSW=426; rank_mean=387.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 1 0 1 3 0 0 c 0 0 0 0 0 0 0 0 0 0 2 0 2 3 0 0 3 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 1

AtMYB123_II_AtMYB123_II_AthaMYB_rc_shift10 (AtMYB123_II:AtMYB123_II:AthaMYB_rc) 0.705 0.564 0.025 0.851 0.823 426 213 431 423 447 388.000
; 1_m4_assembly_4 versus AtMYB123_II_AtMYB123_II_AthaMYB_rc (AtMYB123_II:AtMYB123_II:AthaMYB_rc); m=108/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 388; ----------yAACwAGC ; cor=0.705; Ncor=0.564; logoDP=0.025; NsEucl=0.851; NSW=0.823; rcor=426; rNcor=213; rlogoDP=431; rNsEucl=423; rNSW=447; rank_mean=388.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 2 0 1 2 0 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	match_rank	Aligned matrices
1_m4_assembly_4_shift8 (assembly_4)													; 1_m4_assembly_4 (assembly_4); m=0 (reference); ncol1=10; shift=8; ncol=18; --------wwCAACTAww ; Alignment reference a 0 0 0 0 0 0 0 0 96 68 0 220 220 0 0 220 67 84 c 0 0 0 0 0 0 0 0 22 53 220 0 0 220 0 0 43 37 g 0 0 0 0 0 0 0 0 29 23 0 0 0 0 0 0 43 31 t 0 0 0 0 0 0 0 0 73 76 0 0 0 0 220 0 67 68
MYB23_MA1767.1_JASPAR_shift9 (MYB23:MA1767.1:JASPAR)	0.897	0.673	9.852	0.925	0.950	21	73	24	18	18	30.800	16	; 1_m4_assembly_4 versus MYB23_MA1767.1_JASPAR (MYB23:MA1767.1:JASPAR); m=1/108; ncol2=11; w=0; offset=1; strand=D; shift=9; score= 30.8; ---------yCAACwAmm ; cor=0.897; Ncor=0.673; logoDP=9.852; NsEucl=0.925; NSW=0.950; rcor=21; rNcor=73; rlogoDP=24; rNsEucl=18; rNSW=18; rank_mean=30.800; match_rank=16 a 0 0 0 0 0 0 0 0 0 232 0 1000 1000 0 589 1000 420.29 251 c 0 0 0 0 0 0 0 0 0 348 986 0 0 1000 9.662 0 343 449 g 0 0 0 0 0 0 0 0 0 121 0 0 0 0 0 0 101 91.787 t 0 0 0 0 0 0 0 0 0 300 14.493 0 0 0 401 0 135 208
MYB23_MA1767.2_JASPAR_shift10 (MYB23:MA1767.2:JASPAR)	0.918	0.551	9.849	0.901	0.941	14	229	25	95	28	78.200	39	; 1_m4_assembly_4 versus MYB23_MA1767.2_JASPAR (MYB23:MA1767.2:JASPAR); m=2/108; ncol2=6; w=0; offset=2; strand=D; shift=10; score= 78.2; ----------CAACwA-- ; cor=0.918; Ncor=0.551; logoDP=9.849; NsEucl=0.901; NSW=0.941; rcor=14; rNcor=229; rlogoDP=25; rNsEucl=95; rNSW=28; rank_mean=78.200; match_rank=39 a 0 0 0 0 0 0 0 0 0 0 0 1000 1000 0 589 1000 0 0 c 0 0 0 0 0 0 0 0 0 0 986 0 0 1000 10 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 14 0 0 0 401 0 0 0
MYB60_MA1774.2_JASPAR_shift9 (MYB60:MA1774.2:JASPAR)	0.827	0.676	8.698	0.902	0.913	91	70	63	86	81	78.200	40	; 1_m4_assembly_4 versus MYB60_MA1774.2_JASPAR (MYB60:MA1774.2:JASPAR); m=3/108; ncol2=10; w=0; offset=1; strand=D; shift=9; score= 78.2; ---------yCAACyACy ; cor=0.827; Ncor=0.676; logoDP=8.698; NsEucl=0.902; NSW=0.913; rcor=91; rNcor=70; rlogoDP=63; rNsEucl=86; rNSW=81; rank_mean=78.200; match_rank=40 a 0 0 0 0 0 0 0 0 0 86 0 993 871 0 66 975 129 127 c 0 0 0 0 0 0 0 0 0 514 975 5 127 1000 529 0 835 514 g 0 0 0 0 0 0 0 0 0 52 0 2 0 0 0 25 0 0 t 0 0 0 0 0 0 0 0 0 348 25 0 2 0 405 0 36 360
MYB94_MA1781.2_JASPAR_shift9 (MYB94:MA1781.2:JASPAR)	0.821	0.672	8.326	0.901	0.911	99	76	73	96	91	87.000	48	; 1_m4_assembly_4 versus MYB94_MA1781.2_JASPAR (MYB94:MA1781.2:JASPAR); m=4/108; ncol2=10; w=0; offset=1; strand=D; shift=9; score= 87; ---------yCAACyACy ; cor=0.821; Ncor=0.672; logoDP=8.326; NsEucl=0.901; NSW=0.911; rcor=99; rNcor=76; rlogoDP=73; rNsEucl=96; rNSW=91; rank_mean=87.000; match_rank=48 a 0 0 0 0 0 0 0 0 0 108 0 998 788 0 42 975 125 51 c 0 0 0 0 0 0 0 0 0 571 931 2 212 1000 453 0 852 582 g 0 0 0 0 0 0 0 0 0 55 0 0 0 0 2 18 0 0 t 0 0 0 0 0 0 0 0 0 266 69 0 0 0 503 7 23 367
MYB23.DAP_M0571_AthalianaCistrome_rc_shift9 (MYB23.DAP:M0571:AthalianaCistrome_rc)	0.897	0.673	0.674	0.925	0.950	22	74	337	19	19	94.200		; 1_m4_assembly_4 versus MYB23.DAP_M0571_AthalianaCistrome_rc (MYB23.DAP:M0571:AthalianaCistrome_rc); m=5/108; ncol2=11; w=0; offset=1; strand=R; shift=9; score= 94.2; ---------yCAACwAmm ; cor=0.897; Ncor=0.673; logoDP=0.674; NsEucl=0.925; NSW=0.950; rcor=22; rNcor=74; rlogoDP=337; rNsEucl=19; rNSW=19; rank_mean=94.200; match_rank= a 0 0 0 0 0 0 0 0 0 48 0 207 207 0 122 207 87 52 c 0 0 0 0 0 0 0 0 0 72 204 0 0 207 2 0 71 93 g 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 21 19 t 0 0 0 0 0 0 0 0 0 62 3 0 0 0 83 0 28 43
AT1G18960_UN0826.1_JASPAR_shift7 (AT1G18960:UN0826.1:JASPAR)	0.909	0.496	6.773	0.906	0.947	15	292	126	65	21	103.800		; 1_m4_assembly_4 versus AT1G18960_UN0826.1_JASPAR (AT1G18960:UN0826.1:JASPAR); m=6/108; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 103.8; -------CAmCAAC---- ; cor=0.909; Ncor=0.496; logoDP=6.773; NsEucl=0.906; NSW=0.947; rcor=15; rNcor=292; rlogoDP=126; rNsEucl=65; rNSW=21; rank_mean=103.800; match_rank= a 0 0 0 0 0 0 0 0 959 584 0 959 929 0 0 0 0 0 c 0 0 0 0 0 0 0 1000 40 356 976 0 70 994 0 0 0 0 g 0 0 0 0 0 0 0 0 0 58 23 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 40 0 5 0 0 0 0
MYB96_MA2030.2_JASPAR_shift8 (MYB96:MA2030.2:JASPAR)	0.788	0.716	7.763	0.899	0.899	162	49	90	103	139	108.600		; 1_m4_assembly_4 versus MYB96_MA2030.2_JASPAR (MYB96:MA2030.2:JASPAR); m=7/108; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 108.6; --------mCCAACTACC ; cor=0.788; Ncor=0.716; logoDP=7.763; NsEucl=0.899; NSW=0.899; rcor=162; rNcor=49; rlogoDP=90; rNsEucl=103; rNSW=139; rank_mean=108.600; match_rank= a 0 0 0 0 0 0 0 0 38 8 1 131 113 0 11 116 14 8 c 0 0 0 0 0 0 0 0 74 107 123 1 15 132 23 2 116 102 g 0 0 0 0 0 0 0 0 10 1 0 0 3 0 1 6 0 0 t 0 0 0 0 0 0 0 0 11 17 9 1 2 1 98 9 3 23
MYB30.ampDAP_M0539_AthalianaCistrome_shift3 (MYB30.ampDAP:M0539:AthalianaCistrome)	0.822	0.548	7.250	0.912	0.923	97	232	118	42	60	109.800		; 1_m4_assembly_4 versus MYB30.ampDAP_M0539_AthalianaCistrome (MYB30.ampDAP:M0539:AthalianaCistrome); m=8/108; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 109.8; ---mamyymCCAACyAmy ; cor=0.822; Ncor=0.548; logoDP=7.250; NsEucl=0.912; NSW=0.923; rcor=97; rNcor=232; rlogoDP=118; rNsEucl=42; rNSW=60; rank_mean=109.800; match_rank= a 0 0 0 181 371 255 39 74 217 38 3 592 467 0 57 503 172 95 c 0 0 0 206 90 189 335 201 222 445 494 0 124 592 249 0 336 331 g 0 0 0 60 34 34 50 42 69 13 0 0 0 0 2 84 20 0 t 0 0 0 145 97 114 168 275 84 96 95 0 1 0 284 5 64 166
AtMYB85_II_AtMYB85_II_AthaMYB_rc_shift10 (AtMYB85_II:AtMYB85_II:AthaMYB_rc)	0.886	0.709	0.023	0.912	0.938	37	55	446	43	35	123.200		; 1_m4_assembly_4 versus AtMYB85_II_AtMYB85_II_AthaMYB_rc (AtMYB85_II:AtMYB85_II:AthaMYB_rc); m=9/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 123.2; ----------yAACwAvy ; cor=0.886; Ncor=0.709; logoDP=0.023; NsEucl=0.912; NSW=0.938; rcor=37; rNcor=55; rlogoDP=446; rNsEucl=43; rNSW=35; rank_mean=123.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 3 1 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 3 0 0 1 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 1
ATY13.ampDAP_M0537_AthalianaCistrome_shift3 (ATY13.ampDAP:M0537:AthalianaCistrome)	0.808	0.539	6.370	0.910	0.918	124	241	134	52	72	124.600		; 1_m4_assembly_4 versus ATY13.ampDAP_M0537_AthalianaCistrome (ATY13.ampDAP:M0537:AthalianaCistrome); m=10/108; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 124.6; ---cAmCymCCAACyAmy ; cor=0.808; Ncor=0.539; logoDP=6.370; NsEucl=0.910; NSW=0.918; rcor=124; rNcor=241; rlogoDP=134; rNsEucl=52; rNSW=72; rank_mean=124.600; match_rank= a 0 0 0 101 401 282 0 123 280 57 12 564 421 0 104 409 141 113 c 0 0 0 307 73 185 426 147 157 447 480 0 136 564 221 23 305 273 g 0 0 0 24 27 18 9 32 49 0 2 0 2 0 19 86 9 8 t 0 0 0 132 63 79 129 262 78 60 70 0 5 0 220 46 109 170
ATMYB31_MA1738.1_JASPAR_shift3 (ATMYB31:MA1738.1:JASPAR)	0.805	0.537	6.269	0.909	0.917	131	243	136	54	75	127.800		; 1_m4_assembly_4 versus ATMYB31_MA1738.1_JASPAR (ATMYB31:MA1738.1:JASPAR); m=11/108; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 127.8; ---yAmCtmCCAMCyAmh ; cor=0.805; Ncor=0.537; logoDP=6.269; NsEucl=0.909; NSW=0.917; rcor=131; rNcor=243; rlogoDP=136; rNsEucl=54; rNSW=75; rank_mean=127.800; match_rank= a 0 0 0 174 769 559 0 166 486 106 27.027 1000 736 0 199 760 289 264 c 0 0 0 505 113 285 753 245 302 807 765 0 258 1000 373 45.608 527 439 g 0 0 0 43.919 20.27 23.649 10.135 30.405 76.014 0 0 0 3.378 0 28.716 160 18.581 0 t 0 0 0 277 97.973 132 236 559 135 86.149 207.77 0 1.689 0 399 33.784 166 297
ATY13.DAP_M0496_AthalianaCistrome_shift3 (ATY13.DAP:M0496:AthalianaCistrome)	0.805	0.537	6.267	0.909	0.917	133	244	137	56	76	129.200		; 1_m4_assembly_4 versus ATY13.DAP_M0496_AthalianaCistrome (ATY13.DAP:M0496:AthalianaCistrome); m=12/108; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 129.2; ---yAmCtmCCAMCyAmh ; cor=0.805; Ncor=0.537; logoDP=6.267; NsEucl=0.909; NSW=0.917; rcor=133; rNcor=244; rlogoDP=137; rNsEucl=56; rNSW=76; rank_mean=129.200; match_rank= a 0 0 0 103 455 331 0 98 288 63 16 592 436 0 118 450 171 156 c 0 0 0 299 67 169 446 145 179 478 453 0 153 592 221 27 312 260 g 0 0 0 26 12 14 6 18 45 0 0 0 2 0 17 95 11 0 t 0 0 0 164 58 78 140 331 80 51 123 0 1 0 236 20 98 176
AtMYB73_II_AtMYB73_II_AthaMYB_rc_shift10 (AtMYB73_II:AtMYB73_II:AthaMYB_rc)	0.861	0.689	0.145	0.903	0.924	54	65	406	84	57	133.200		; 1_m4_assembly_4 versus AtMYB73_II_AtMYB73_II_AthaMYB_rc (AtMYB73_II:AtMYB73_II:AthaMYB_rc); m=13/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 133.2; ----------yAACTRhY ; cor=0.861; Ncor=0.689; logoDP=0.145; NsEucl=0.903; NSW=0.924; rcor=54; rNcor=65; rlogoDP=406; rNsEucl=84; rNSW=57; rank_mean=133.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 3 2 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 1 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 4 0 1 1
AtMYB45_II_AtMYB45_II_AthaMYB_rc_shift10 (AtMYB45_II:AtMYB45_II:AthaMYB_rc)	0.861	0.689	0.024	0.903	0.925	55	66	442	80	56	139.800		; 1_m4_assembly_4 versus AtMYB45_II_AtMYB45_II_AthaMYB_rc (AtMYB45_II:AtMYB45_II:AthaMYB_rc); m=14/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 139.8; ----------yAACTAmC ; cor=0.861; Ncor=0.689; logoDP=0.024; NsEucl=0.903; NSW=0.925; rcor=55; rNcor=66; rlogoDP=442; rNsEucl=80; rNSW=56; rank_mean=139.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 4 0 1 5 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 5 0 0 2 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 4 0 0 1
AtMYB124_II_AtMYB124_II_AthaMYB_rc_shift10 (AtMYB124_II:AtMYB124_II:AthaMYB_rc)	0.855	0.684	0.025	0.900	0.921	61	67	431	99	63	144.200		; 1_m4_assembly_4 versus AtMYB124_II_AtMYB124_II_AthaMYB_rc (AtMYB124_II:AtMYB124_II:AthaMYB_rc); m=15/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 144.2; ----------yAACWAvY ; cor=0.855; Ncor=0.684; logoDP=0.025; NsEucl=0.900; NSW=0.921; rcor=61; rNcor=67; rlogoDP=431; rNsEucl=99; rNSW=63; rank_mean=144.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 4 2 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 1 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 1
MYB30_MA1768.2_JASPAR_shift9 (MYB30:MA1768.2:JASPAR)	0.799	0.553	6.888	0.897	0.905	141	225	123	114	120	144.600		; 1_m4_assembly_4 versus MYB30_MA1768.2_JASPAR (MYB30:MA1768.2:JASPAR); m=16/108; ncol2=12; w=0; offset=1; strand=D; shift=9; score= 144.6; ---------cCAACyACC ; cor=0.799; Ncor=0.553; logoDP=6.888; NsEucl=0.897; NSW=0.905; rcor=141; rNcor=225; rlogoDP=123; rNsEucl=114; rNSW=120; rank_mean=144.600; match_rank= a 0 0 0 0 0 0 0 0 0 180 12 983 880 0 62 764 167 86 c 0 0 0 0 0 0 0 0 0 537 843 15 103 1000 525 12 744 682 g 0 0 0 0 0 0 0 0 0 67 0 0 3 0 22 173 0 0 t 0 0 0 0 0 0 0 0 0 215 145 2 13 0 391 51 89 232
AtMYB94_II_AtMYB94_II_AthaMYB_rc_shift10 (AtMYB94_II:AtMYB94_II:AthaMYB_rc)	0.851	0.680	0.039	0.899	0.919	65	68	423	102	67	145.000		; 1_m4_assembly_4 versus AtMYB94_II_AtMYB94_II_AthaMYB_rc (AtMYB94_II:AtMYB94_II:AthaMYB_rc); m=17/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 145; ----------CAACTAaC ; cor=0.851; Ncor=0.680; logoDP=0.039; NsEucl=0.899; NSW=0.919; rcor=65; rNcor=68; rlogoDP=423; rNsEucl=102; rNSW=67; rank_mean=145.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 4 0 1 4 2 0 c 0 0 0 0 0 0 0 0 0 0 4 0 1 5 0 0 1 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 1 0
MYB60.DAP_M0563_AthalianaCistrome_shift4 (MYB60.DAP:M0563:AthalianaCistrome)	0.809	0.426	8.708	0.907	0.913	120	404	61	64	87	147.200		; 1_m4_assembly_4 versus MYB60.DAP_M0563_AthalianaCistrome (MYB60.DAP:M0563:AthalianaCistrome); m=18/108; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score= 147.2; ----hwwyyyCAACyACy ; cor=0.809; Ncor=0.426; logoDP=8.708; NsEucl=0.907; NSW=0.913; rcor=120; rNcor=404; rlogoDP=61; rNsEucl=64; rNSW=87; rank_mean=147.200; match_rank= a 0 0 0 0 123 145 111 64 49 38 0 439 385 0 29 431 57 56 c 0 0 0 0 139 84 80 160 162 227 431 2 56 442 234 0 369 227 g 0 0 0 0 49 67 75 38 40 23 0 1 0 0 0 11 0 0 t 0 0 0 0 131 146 176 180 191 154 11 0 1 0 179 0 16 159
MYB60_MA1774.1_JASPAR_shift4 (MYB60:MA1774.1:JASPAR)	0.809	0.426	8.707	0.907	0.913	121	405	62	63	86	147.400		; 1_m4_assembly_4 versus MYB60_MA1774.1_JASPAR (MYB60:MA1774.1:JASPAR); m=19/108; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score= 147.4; ----hwwyyyCAACyACy ; cor=0.809; Ncor=0.426; logoDP=8.707; NsEucl=0.907; NSW=0.913; rcor=121; rNcor=405; rlogoDP=62; rNsEucl=63; rNSW=86; rank_mean=147.400; match_rank= a 0 0 0 0 278 328 251 145 110.86 85.973 0 993 871 0 65.611 975 129 127 c 0 0 0 0 314.48 190 181 362 367 514 975 4.525 127 1000 529 0 835 514 g 0 0 0 0 110.86 152 170 85.973 90.498 52.036 0 2.262 0 0 0 24.887 0 0 t 0 0 0 0 296.38 330 398.19 407.24 432 348 24.887 0 2.262 0 405 0 36.199 360
MYB30_MA1768.1_JASPAR_shift6 (MYB30:MA1768.1:JASPAR)	0.783	0.522	6.895	0.903	0.906	166	261	122	78	110	147.400		; 1_m4_assembly_4 versus MYB30_MA1768.1_JASPAR (MYB30:MA1768.1:JASPAR); m=20/108; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score= 147.4; ------yymcCAACyACC ; cor=0.783; Ncor=0.522; logoDP=6.895; NsEucl=0.903; NSW=0.906; rcor=166; rNcor=261; rlogoDP=122; rNsEucl=78; rNSW=110; rank_mean=147.400; match_rank= a 0 0 0 0 0 0 153 141 261 180 11.785 983 880 0 62.29 764.31 167 85.859 c 0 0 0 0 0 0 306 357 439 537 843 15.152 103 1000 525 11.785 744 682 g 0 0 0 0 0 0 195 84.175 67.34 67.34 0 0 3.367 0 21.886 173 0 0 t 0 0 0 0 0 0 345 418 232 215 145 1.684 13.468 0 391 50.505 89.226 232
AtMYB72_II_AtMYB72_II_AthaMYB_rc_shift10 (AtMYB72_II:AtMYB72_II:AthaMYB_rc)	0.850	0.680	0.024	0.900	0.921	66	69	442	98	62	147.400		; 1_m4_assembly_4 versus AtMYB72_II_AtMYB72_II_AthaMYB_rc (AtMYB72_II:AtMYB72_II:AthaMYB_rc); m=21/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 147.4; ----------yAACtAcy ; cor=0.850; Ncor=0.680; logoDP=0.024; NsEucl=0.900; NSW=0.921; rcor=66; rNcor=69; rlogoDP=442; rNsEucl=98; rNSW=62; rank_mean=147.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 4 0 1 5 1 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 5 1 0 3 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 2
MYB30.DAP_M0549_AthalianaCistrome_shift6 (MYB30.DAP:M0549:AthalianaCistrome)	0.783	0.522	6.896	0.903	0.906	168	262	121	79	111	148.200		; 1_m4_assembly_4 versus MYB30.DAP_M0549_AthalianaCistrome (MYB30.DAP:M0549:AthalianaCistrome); m=22/108; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score= 148.2; ------yymcCAACyACC ; cor=0.783; Ncor=0.522; logoDP=6.896; NsEucl=0.903; NSW=0.906; rcor=168; rNcor=262; rlogoDP=121; rNsEucl=79; rNSW=111; rank_mean=148.200; match_rank= a 0 0 0 0 0 0 91 84 155 107 7 584 523 0 37 454 99 51 c 0 0 0 0 0 0 182 212 261 319 501 9 61 594 312 7 442 405 g 0 0 0 0 0 0 116 50 40 40 0 0 2 0 13 103 0 0 t 0 0 0 0 0 0 205 248 138 128 86 1 8 0 232 30 53 138
AtMYB14_II_AtMYB14_II_AthaMYB_rc_shift10 (AtMYB14_II:AtMYB14_II:AthaMYB_rc)	0.844	0.675	0.025	0.898	0.917	71	71	431	111	74	151.600		; 1_m4_assembly_4 versus AtMYB14_II_AtMYB14_II_AthaMYB_rc (AtMYB14_II:AtMYB14_II:AthaMYB_rc); m=23/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 151.6; ----------yAACtAmy ; cor=0.844; Ncor=0.675; logoDP=0.025; NsEucl=0.898; NSW=0.917; rcor=71; rNcor=71; rlogoDP=431; rNsEucl=111; rNSW=74; rank_mean=151.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 5 0 1 6 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 6 1 0 3 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 0 0 2
AtMYB30_II_AtMYB30_II_AthaMYB_rc_shift10 (AtMYB30_II:AtMYB30_II:AthaMYB_rc)	0.840	0.672	0.143	0.895	0.912	73	75	407	130	89	154.800		; 1_m4_assembly_4 versus AtMYB30_II_AtMYB30_II_AthaMYB_rc (AtMYB30_II:AtMYB30_II:AthaMYB_rc); m=24/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 154.8; ----------YAMCTRhC ; cor=0.840; Ncor=0.672; logoDP=0.143; NsEucl=0.895; NSW=0.912; rcor=73; rNcor=75; rlogoDP=407; rNsEucl=130; rNSW=89; rank_mean=154.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 3 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 4 0 0 1 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 1 0
AtMYB10_I_AtMYB10_I_AthaMYB_rc_shift10 (AtMYB10_I:AtMYB10_I:AthaMYB_rc)	0.821	0.657	0.849	0.892	0.906	98	88	332	151	109	155.600		; 1_m4_assembly_4 versus AtMYB10_I_AtMYB10_I_AthaMYB_rc (AtMYB10_I:AtMYB10_I:AthaMYB_rc); m=25/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 155.6; ----------yAACwdww ; cor=0.821; Ncor=0.657; logoDP=0.849; NsEucl=0.892; NSW=0.906; rcor=98; rNcor=88; rlogoDP=332; rNsEucl=151; rNSW=109; rank_mean=155.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 1 1 1 c 0 0 0 0 0 0 0 0 0 0 2 0 0 3 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 1 2 2
MYB94_MA1781.1_JASPAR_shift4 (MYB94:MA1781.1:JASPAR)	0.802	0.422	8.338	0.905	0.910	136	411	72	70	94	156.600		; 1_m4_assembly_4 versus MYB94_MA1781.1_JASPAR (MYB94:MA1781.1:JASPAR); m=26/108; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score= 156.6; ----whyyyyCAACyACy ; cor=0.802; Ncor=0.422; logoDP=8.338; NsEucl=0.905; NSW=0.910; rcor=136; rNcor=411; rlogoDP=72; rNsEucl=70; rNSW=94; rank_mean=156.600; match_rank= a 0 0 0 0 400 295 192.24 125.22 187 108 0 998 788.36 0 42.328 975 125.22 51.146 c 0 0 0 0 211.64 261 302 302 455 571 931 1.764 211.64 1000 453 0 852 582 g 0 0 0 0 105.82 98.765 164 109 105.82 54.674 0 0 0 0 1.764 17.637 0 0 t 0 0 0 0 282 346 342 464 252 266 68.783 0 0 0 503 7.055 22.928 367
AT1G24250.DAP_M0719_AthalianaCistrome_shift0 (AT1G24250.DAP:M0719:AthalianaCistrome)	0.808	0.449	5.066	0.910	0.919	122	363	184	49	65	156.600		; 1_m4_assembly_4 versus AT1G24250.DAP_M0719_AthalianaCistrome (AT1G24250.DAP:M0719:AthalianaCistrome); m=27/108; ncol2=18; w=-8; offset=-8; strand=D; shift=0; score= 156.6; tyyyAACtaCCAMCyAmh ; cor=0.808; Ncor=0.449; logoDP=5.066; NsEucl=0.910; NSW=0.919; rcor=122; rNcor=363; rlogoDP=184; rNsEucl=49; rNSW=65; rank_mean=156.600; match_rank= a 96 98 82 30 461 350 0 78 295 65 32 438 339 9 103 338 163 133 c 97 173 189 308 2 82 451 100 70 343 325 3 118 451 173 26 212 176 g 65 35 46 10 0 10 0 9 44 27 0 3 0 6 17 82 14 5 t 209 161 150 119 4 25 16 280 58 32 110 23 10 1 174 21 78 153
AtMYB59_II_AtMYB59_II_AthaMYB_rc_shift10 (AtMYB59_II:AtMYB59_II:AthaMYB_rc)	0.838	0.670	0.025	0.896	0.914	76	77	431	123	79	157.200		; 1_m4_assembly_4 versus AtMYB59_II_AtMYB59_II_AthaMYB_rc (AtMYB59_II:AtMYB59_II:AthaMYB_rc); m=28/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 157.2; ----------yAAChAvy ; cor=0.838; Ncor=0.670; logoDP=0.025; NsEucl=0.896; NSW=0.914; rcor=76; rNcor=77; rlogoDP=431; rNsEucl=123; rNSW=79; rank_mean=157.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 4 1 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 1 0 2 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 2
MYB99_UN0368.1_JASPAR_shift8 (MYB99:UN0368.1:JASPAR)	0.740	0.740	9.154	0.889	0.877	293	36	39	172	249	157.800		; 1_m4_assembly_4 versus MYB99_UN0368.1_JASPAR (MYB99:UN0368.1:JASPAR); m=29/108; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 157.8; --------yyCACCTAmy ; cor=0.740; Ncor=0.740; logoDP=9.154; NsEucl=0.889; NSW=0.877; rcor=293; rNcor=36; rlogoDP=39; rNsEucl=172; rNSW=249; rank_mean=157.800; match_rank= a 0 0 0 0 0 0 0 0 154 168 0 987 0 0 1 1020 535 140 c 0 0 0 0 0 0 0 0 332 312 1023 1 1004 1022 0 3 372 471 g 0 0 0 0 0 0 0 0 106 90 0 26 11 1 12 0 32 35 t 0 0 0 0 0 0 0 0 431 453 0 9 8 0 1010 0 84 377
MYB96_MA2030.1_JASPAR_shift4 (MYB96:MA2030.1:JASPAR)	0.788	0.463	7.763	0.899	0.899	162	340	90	103	139	166.800		; 1_m4_assembly_4 versus MYB96_MA2030.1_JASPAR (MYB96:MA2030.1:JASPAR); m=30/108; ncol2=17; w=-4; offset=-4; strand=D; shift=4; score= 166.8; ----whcymCCAACTACC ; cor=0.788; Ncor=0.463; logoDP=7.763; NsEucl=0.899; NSW=0.899; rcor=162; rNcor=340; rlogoDP=90; rNsEucl=103; rNSW=139; rank_mean=166.800; match_rank= a 0 0 0 0 63 46 11 20 38 8 1 131 113 0 11 116 14 8 c 0 0 0 0 20 36 78 50 74 107 123 1 15 132 23 2 116 102 g 0 0 0 0 10 8 11 10 10 1 0 0 3 0 1 6 0 0 t 0 0 0 0 40 43 33 53 11 17 9 1 2 1 98 9 3 23
AtMYB6_II_AtMYB6_II_AthaMYB_rc_shift10 (AtMYB6_II:AtMYB6_II:AthaMYB_rc)	0.831	0.665	0.023	0.894	0.910	86	83	446	133	96	168.800		; 1_m4_assembly_4 versus AtMYB6_II_AtMYB6_II_AthaMYB_rc (AtMYB6_II:AtMYB6_II:AthaMYB_rc); m=31/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 168.8; ----------yAAChAvy ; cor=0.831; Ncor=0.665; logoDP=0.023; NsEucl=0.894; NSW=0.910; rcor=86; rNcor=83; rlogoDP=446; rNsEucl=133; rNSW=96; rank_mean=168.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 3 1 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 3 1 0 1 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1
AtMYB112_II_AtMYB112_II_AthaMYB_rc_shift10 (AtMYB112_II:AtMYB112_II:AthaMYB_rc)	0.817	0.653	0.272	0.891	0.904	105	90	371	162	121	169.800		; 1_m4_assembly_4 versus AtMYB112_II_AtMYB112_II_AthaMYB_rc (AtMYB112_II:AtMYB112_II:AthaMYB_rc); m=32/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 169.8; ----------yAACtAvy ; cor=0.817; Ncor=0.653; logoDP=0.272; NsEucl=0.891; NSW=0.904; rcor=105; rNcor=90; rlogoDP=371; rNsEucl=162; rNSW=121; rank_mean=169.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 4 1.67 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 5 1 0 1.67 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.67 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 1 0 2
AtMYB80_II_AtMYB80_II_AthaMYB_rc_shift10 (AtMYB80_II:AtMYB80_II:AthaMYB_rc)	0.826	0.660	0.023	0.892	0.907	93	87	446	146	107	175.800		; 1_m4_assembly_4 versus AtMYB80_II_AtMYB80_II_AthaMYB_rc (AtMYB80_II:AtMYB80_II:AthaMYB_rc); m=33/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 175.8; ----------yAmCwAmC ; cor=0.826; Ncor=0.660; logoDP=0.023; NsEucl=0.892; NSW=0.907; rcor=93; rNcor=87; rlogoDP=446; rNsEucl=146; rNSW=107; rank_mean=175.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 4 0 2 6 2 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 6 0 0 3 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 4 0 0 1
MYB52_MYB52_2_ArabidopsisPBM_rc_shift9 (MYB52:MYB52_2:ArabidopsisPBM_rc)	0.791	0.647	0.259	0.893	0.898	154	97	379	136	142	181.600		; 1_m4_assembly_4 versus MYB52_MYB52_2_ArabidopsisPBM_rc (MYB52:MYB52_2:ArabidopsisPBM_rc); m=34/108; ncol2=10; w=0; offset=1; strand=R; shift=9; score= 181.6; ---------gcAACTAAC ; cor=0.791; Ncor=0.647; logoDP=0.259; NsEucl=0.893; NSW=0.898; rcor=154; rNcor=97; rlogoDP=379; rNsEucl=136; rNSW=142; rank_mean=181.600; match_rank= a 0 0 0 0 0 0 0 0 0 23 9 89 92 3 8 95 92 2 c 0 0 0 0 0 0 0 0 0 17 62 6 3 92 4 1 5 93 g 0 0 0 0 0 0 0 0 0 45 5 3 4 3 15 3 1 2 t 0 0 0 0 0 0 0 0 0 15 24 2 1 2 73 1 2 3
AtMYB121_II_AtMYB121_II_AthaMYB_rc_shift10 (AtMYB121_II:AtMYB121_II:AthaMYB_rc)	0.819	0.655	0.024	0.891	0.905	102	89	441	160	117	181.800		; 1_m4_assembly_4 versus AtMYB121_II_AtMYB121_II_AthaMYB_rc (AtMYB121_II:AtMYB121_II:AthaMYB_rc); m=35/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 181.8; ----------yAMCwAmY ; cor=0.819; Ncor=0.655; logoDP=0.024; NsEucl=0.891; NSW=0.905; rcor=102; rNcor=89; rlogoDP=441; rNsEucl=160; rNSW=117; rank_mean=181.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 7 5 0 2 7 2 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 7 1 0 4 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 0 0 2
AtMYB0_II_AtMYB0_II_AthaMYB_rc_shift10 (AtMYB0_II:AtMYB0_II:AthaMYB_rc)	0.828	0.663	0.028	0.889	0.901	90	86	425	178	136	183.000		; 1_m4_assembly_4 versus AtMYB0_II_AtMYB0_II_AthaMYB_rc (AtMYB0_II:AtMYB0_II:AthaMYB_rc); m=36/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 183; ----------yAACTAmy ; cor=0.828; Ncor=0.663; logoDP=0.028; NsEucl=0.889; NSW=0.901; rcor=90; rNcor=86; rlogoDP=425; rNsEucl=178; rNSW=136; rank_mean=183.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 3 2 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 3 0 0 1 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 1
AtMYB13_II_AtMYB13_II_AthaMYB_rc_shift10 (AtMYB13_II:AtMYB13_II:AthaMYB_rc)	0.817	0.653	0.024	0.889	0.902	106	91	445	168	130	188.000		; 1_m4_assembly_4 versus AtMYB13_II_AtMYB13_II_AthaMYB_rc (AtMYB13_II:AtMYB13_II:AthaMYB_rc); m=37/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 188; ----------CAmCwAcC ; cor=0.817; Ncor=0.653; logoDP=0.024; NsEucl=0.889; NSW=0.902; rcor=106; rNcor=91; rlogoDP=445; rNsEucl=168; rNSW=130; rank_mean=188.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 3 0 2 5 1 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 5 0 0 3 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 3 0 0 1
AtMYB99_II_AtMYB99_II_AthaMYB_rc_shift10 (AtMYB99_II:AtMYB99_II:AthaMYB_rc)	0.811	0.649	0.023	0.889	0.901	115	95	446	175	135	193.200		; 1_m4_assembly_4 versus AtMYB99_II_AtMYB99_II_AthaMYB_rc (AtMYB99_II:AtMYB99_II:AthaMYB_rc); m=38/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 193.2; ----------yAmCwAcy ; cor=0.811; Ncor=0.649; logoDP=0.023; NsEucl=0.889; NSW=0.901; rcor=115; rNcor=95; rlogoDP=446; rNsEucl=175; rNSW=135; rank_mean=193.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 4 0 2 6 1 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 6 1 0 4 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 2
AtMYB15_I_AtMYB15_I_AthaMYB_rc_shift10 (AtMYB15_I:AtMYB15_I:AthaMYB_rc)	0.794	0.635	0.328	0.885	0.895	149	110	362	215	151	197.400		; 1_m4_assembly_4 versus AtMYB15_I_AtMYB15_I_AthaMYB_rc (AtMYB15_I:AtMYB15_I:AthaMYB_rc); m=39/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 197.4; ----------yAACtgww ; cor=0.794; Ncor=0.635; logoDP=0.328; NsEucl=0.885; NSW=0.895; rcor=149; rNcor=110; rlogoDP=362; rNsEucl=215; rNSW=151; rank_mean=197.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 1 2 2 c 0 0 0 0 0 0 0 0 0 0 3 0 0 5 1 0 1 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 1 2 2
AtMYB44_II_AtMYB44_II_AthaMYB_rc_shift10 (AtMYB44_II:AtMYB44_II:AthaMYB_rc)	0.798	0.639	0.267	0.885	0.894	142	107	376	217	154	199.200		; 1_m4_assembly_4 versus AtMYB44_II_AtMYB44_II_AthaMYB_rc (AtMYB44_II:AtMYB44_II:AthaMYB_rc); m=40/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 199.2; ----------yAACTahC ; cor=0.798; Ncor=0.639; logoDP=0.267; NsEucl=0.885; NSW=0.894; rcor=142; rNcor=107; rlogoDP=376; rNsEucl=217; rNSW=154; rank_mean=199.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 3 2.50 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 5 1 0 1.25 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 1 1.25 1
AtMYB37_I_AtMYB37_I_AthaMYB_rc_shift10 (AtMYB37_I:AtMYB37_I:AthaMYB_rc)	0.799	0.639	0.160	0.886	0.897	140	106	401	207	143	199.400		; 1_m4_assembly_4 versus AtMYB37_I_AtMYB37_I_AthaMYB_rc (AtMYB37_I:AtMYB37_I:AthaMYB_rc); m=41/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 199.4; ----------yAACtgaw ; cor=0.799; Ncor=0.639; logoDP=0.160; NsEucl=0.886; NSW=0.897; rcor=140; rNcor=106; rlogoDP=401; rNsEucl=207; rNSW=143; rank_mean=199.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 1 2 2 c 0 0 0 0 0 0 0 0 0 0 3 0 0 5 1 0 1 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 1 1 2
AtMYB103_II_AtMYB103_II_AthaMYB_rc_shift10 (AtMYB103_II:AtMYB103_II:AthaMYB_rc)	0.806	0.645	0.025	0.887	0.898	128	101	431	201	141	200.400		; 1_m4_assembly_4 versus AtMYB103_II_AtMYB103_II_AthaMYB_rc (AtMYB103_II:AtMYB103_II:AthaMYB_rc); m=42/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 200.4; ----------yAMCwAmY ; cor=0.806; Ncor=0.645; logoDP=0.025; NsEucl=0.887; NSW=0.898; rcor=128; rNcor=101; rlogoDP=431; rNsEucl=201; rNSW=141; rank_mean=200.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 8 6 0 2 8 2 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 8 1 0 5 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 5 0 0 2
AtMYB121_I_AtMYB121_I_AthaMYB_rc_shift10 (AtMYB121_I:AtMYB121_I:AthaMYB_rc)	0.790	0.632	0.625	0.884	0.892	159	122	339	233	166	203.800		; 1_m4_assembly_4 versus AtMYB121_I_AtMYB121_I_AthaMYB_rc (AtMYB121_I:AtMYB121_I:AthaMYB_rc); m=43/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 203.8; ----------yAACWdwh ; cor=0.790; Ncor=0.632; logoDP=0.625; NsEucl=0.884; NSW=0.892; rcor=159; rNcor=122; rlogoDP=339; rNsEucl=233; rNSW=166; rank_mean=203.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 1 2 1 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 0 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 1 2 2
AtMYB35_II_AtMYB35_II_AthaMYB_rc_shift10 (AtMYB35_II:AtMYB35_II:AthaMYB_rc)	0.805	0.644	0.025	0.885	0.895	132	103	431	214	150	206.000		; 1_m4_assembly_4 versus AtMYB35_II_AtMYB35_II_AthaMYB_rc (AtMYB35_II:AtMYB35_II:AthaMYB_rc); m=44/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 206; ----------yAACwAsy ; cor=0.805; Ncor=0.644; logoDP=0.025; NsEucl=0.885; NSW=0.895; rcor=132; rNcor=103; rlogoDP=431; rNsEucl=214; rNSW=150; rank_mean=206.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 2 0 1 2 0 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 1 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1
MYB94.DAP_M0556_AthalianaCistrome_rc_shift4 (MYB94.DAP:M0556:AthalianaCistrome_rc)	0.802	0.422	1.377	0.905	0.910	137	412	321	71	95	207.200		; 1_m4_assembly_4 versus MYB94.DAP_M0556_AthalianaCistrome_rc (MYB94.DAP:M0556:AthalianaCistrome_rc); m=45/108; ncol2=19; w=-4; offset=-4; strand=R; shift=4; score= 207.2; ----whyyyyCAACyACy ; cor=0.802; Ncor=0.422; logoDP=1.377; NsEucl=0.905; NSW=0.910; rcor=137; rNcor=412; rlogoDP=321; rNsEucl=71; rNSW=95; rank_mean=207.200; match_rank= a 0 0 0 0 227 167 109 71 106 61 0 566 447 0 24 553 71 29 c 0 0 0 0 120 148 171 171 258 324 528 1 120 567 257 0 483 330 g 0 0 0 0 60 56 93 62 60 31 0 0 0 0 1 10 0 0 t 0 0 0 0 160 196 194 263 143 151 39 0 0 0 285 4 13 208
AtMYB49_II_AtMYB49_II_AthaMYB_rc_shift10 (AtMYB49_II:AtMYB49_II:AthaMYB_rc)	0.793	0.634	0.219	0.884	0.892	152	113	387	227	162	208.200		; 1_m4_assembly_4 versus AtMYB49_II_AtMYB49_II_AthaMYB_rc (AtMYB49_II:AtMYB49_II:AthaMYB_rc); m=46/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 208.2; ----------yAACyAmY ; cor=0.793; Ncor=0.634; logoDP=0.219; NsEucl=0.884; NSW=0.892; rcor=152; rNcor=113; rlogoDP=387; rNsEucl=227; rNSW=162; rank_mean=208.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 7 6 0 1 6 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 7 2 0 4 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 1 0 2
AtMYB31_II_AtMYB31_II_AthaMYB_rc_shift10 (AtMYB31_II:AtMYB31_II:AthaMYB_rc)	0.797	0.637	0.159	0.883	0.891	147	108	402	240	178	215.000		; 1_m4_assembly_4 versus AtMYB31_II_AtMYB31_II_AthaMYB_rc (AtMYB31_II:AtMYB31_II:AthaMYB_rc); m=47/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 215; ----------CAmCwrbC ; cor=0.797; Ncor=0.637; logoDP=0.159; NsEucl=0.883; NSW=0.891; rcor=147; rNcor=108; rlogoDP=402; rNsEucl=240; rNSW=178; rank_mean=215.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 2 0 1 2 0 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 3 0 0 1 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0
MYB96.DAP_M0547_AthalianaCistrome_rc_shift3 (MYB96.DAP:M0547:AthalianaCistrome_rc)	0.787	0.437	0.209	0.906	0.911	164	390	391	67	92	220.800		; 1_m4_assembly_4 versus MYB96.DAP_M0547_AthalianaCistrome_rc (MYB96.DAP:M0547:AthalianaCistrome_rc); m=48/108; ncol2=18; w=-5; offset=-5; strand=R; shift=3; score= 220.8; ---yAaCyaCCAmCyAmh ; cor=0.787; Ncor=0.437; logoDP=0.209; NsEucl=0.906; NSW=0.911; rcor=164; rNcor=390; rlogoDP=391; rNsEucl=67; rNSW=92; rank_mean=220.800; match_rank= a 0 0 0 67 526 392 0 108 331 42 25 576 362 12 144 416 185 151 c 0 0 0 334 41 142 538 177 109 490 446 0 217 577 176 47 290 251 g 0 0 0 28 10 12 8 35 80 10 0 6 4 0 31 97 21 13 t 0 0 0 167 19 50 50 276 76 54 125 14 13 7 245 36 100 181
AtMYB40_II_AtMYB40_II_AthaMYB_rc_shift10 (AtMYB40_II:AtMYB40_II:AthaMYB_rc)	0.783	0.627	0.244	0.881	0.887	167	127	380	256	194	224.800		; 1_m4_assembly_4 versus AtMYB40_II_AtMYB40_II_AthaMYB_rc (AtMYB40_II:AtMYB40_II:AthaMYB_rc); m=49/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 224.8; ----------yAACyAvy ; cor=0.783; Ncor=0.627; logoDP=0.244; NsEucl=0.881; NSW=0.887; rcor=167; rNcor=127; rlogoDP=380; rNsEucl=256; rNSW=194; rank_mean=224.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 6 0 1 5 1.71 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 6 2 0 2.57 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.71 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 3 1 0 3
AtMYB102_I_AtMYB102_I_AthaMYB_rc_shift10 (AtMYB102_I:AtMYB102_I:AthaMYB_rc)	0.781	0.625	0.224	0.882	0.888	174	130	385	251	189	225.800		; 1_m4_assembly_4 versus AtMYB102_I_AtMYB102_I_AthaMYB_rc (AtMYB102_I:AtMYB102_I:AthaMYB_rc); m=50/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 225.8; ----------yAACtkww ; cor=0.781; Ncor=0.625; logoDP=0.224; NsEucl=0.882; NSW=0.888; rcor=174; rNcor=130; rlogoDP=385; rNsEucl=251; rNSW=189; rank_mean=225.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 6 0 1 1 2 2 c 0 0 0 0 0 0 0 0 0 0 3 0 0 6 1 0 1 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 2 2 3
AtMYB105_I_AtMYB105_I_AthaMYB_rc_shift10 (AtMYB105_I:AtMYB105_I:AthaMYB_rc)	0.778	0.622	0.505	0.880	0.885	182	132	351	261	206	226.400		; 1_m4_assembly_4 versus AtMYB105_I_AtMYB105_I_AthaMYB_rc (AtMYB105_I:AtMYB105_I:AthaMYB_rc); m=51/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 226.4; ----------yAACWddW ; cor=0.778; Ncor=0.622; logoDP=0.505; NsEucl=0.880; NSW=0.885; rcor=182; rNcor=132; rlogoDP=351; rNsEucl=261; rNSW=206; rank_mean=226.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 1 1 1 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 2 2 3
AtMYB19_II_AtMYB19_II_AthaMYB_rc_shift10 (AtMYB19_II:AtMYB19_II:AthaMYB_rc)	0.791	0.632	0.024	0.883	0.890	157	117	442	245	179	228.000		; 1_m4_assembly_4 versus AtMYB19_II_AtMYB19_II_AthaMYB_rc (AtMYB19_II:AtMYB19_II:AthaMYB_rc); m=52/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 228; ----------yAmCtAmC ; cor=0.791; Ncor=0.632; logoDP=0.024; NsEucl=0.883; NSW=0.890; rcor=157; rNcor=117; rlogoDP=442; rNsEucl=245; rNSW=179; rank_mean=228.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 3 0 1 5 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 2 5 1 0 3 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 1
AtMYB42_II_AtMYB42_II_AthaMYB_rc_shift10 (AtMYB42_II:AtMYB42_II:AthaMYB_rc)	0.781	0.625	0.200	0.881	0.887	172	129	393	255	193	228.400		; 1_m4_assembly_4 versus AtMYB42_II_AtMYB42_II_AthaMYB_rc (AtMYB42_II:AtMYB42_II:AthaMYB_rc); m=53/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 228.4; ----------yAMChACy ; cor=0.781; Ncor=0.625; logoDP=0.200; NsEucl=0.881; NSW=0.887; rcor=172; rNcor=129; rlogoDP=393; rNsEucl=255; rNSW=193; rank_mean=228.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 8 6 0 2 7 1.14 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 8 2 0 5.71 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.14 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 1 0 3
MYB83_B73_1_m1_EEAD0449_EEADannot_rc_shift4 (MYB83_B73_1_m1:EEAD0449:EEADannot_rc)	0.760	0.507	0.385	0.897	0.893	228	282	355	121	159	229.000		; 1_m4_assembly_4 versus MYB83_B73_1_m1_EEAD0449_EEADannot_rc (MYB83_B73_1_m1:EEAD0449:EEADannot_rc); m=54/108; ncol2=15; w=-4; offset=-4; strand=R; shift=4; score= 229; ----mmyycCCAMCyAMC ; cor=0.760; Ncor=0.507; logoDP=0.385; NsEucl=0.897; NSW=0.893; rcor=228; rNcor=282; rlogoDP=355; rNsEucl=121; rNSW=159; rank_mean=229.000; match_rank= a 0 0 0 0 41 37 13 23 16 10 0 100 68 0 5 94 28 3 c 0 0 0 0 27 37 43 39 55 70 81 0 32 100 39 0 71 76 g 0 0 0 0 10 8 12 10 14 4 0 0 0 0 1 3 0 0 t 0 0 0 0 22 18 32 28 15 16 19 0 0 0 55 3 1 21
MYB80_MA1778.2_JASPAR_shift8 (MYB80:MA1778.2:JASPAR)	0.712	0.593	7.101	0.888	0.875	395	173	120	190	273	230.200		; 1_m4_assembly_4 versus MYB80_MA1778.2_JASPAR (MYB80:MA1778.2:JASPAR); m=55/108; ncol2=12; w=0; offset=0; strand=D; shift=8; score= 230.2; --------tyyACCTAmy ; cor=0.712; Ncor=0.593; logoDP=7.101; NsEucl=0.888; NSW=0.875; rcor=395; rNcor=173; rlogoDP=120; rNsEucl=190; rNSW=273; rank_mean=230.200; match_rank= a 0 0 0 0 0 0 0 0 62 101 62 998 229 0 212 1000 627 81 c 0 0 0 0 0 0 0 0 242 297 471 0 771 1000 8 0 371 392 g 0 0 0 0 0 0 0 0 136 64 66 0 0 0 5 0 0 8 t 0 0 0 0 0 0 0 0 560 538 402 2 0 0 775 0 2 519
MYB39_MA1769.2_JASPAR_shift8 (MYB39:MA1769.2:JASPAR)	0.713	0.594	7.522	0.887	0.872	390	170	108	203	297	233.600		; 1_m4_assembly_4 versus MYB39_MA1769.2_JASPAR (MYB39:MA1769.2:JASPAR); m=56/108; ncol2=12; w=0; offset=0; strand=D; shift=8; score= 233.6; --------yyyACCTAmy ; cor=0.713; Ncor=0.594; logoDP=7.522; NsEucl=0.887; NSW=0.872; rcor=390; rNcor=170; rlogoDP=108; rNsEucl=203; rNSW=297; rank_mean=233.600; match_rank= a 0 0 0 0 0 0 0 0 50 67 34 993 138 0 169 1000 554 46 c 0 0 0 0 0 0 0 0 309 352 670 0 856 1000 0 0 439 470 g 0 0 0 0 0 0 0 0 94 74 17 7 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 547 508 279 0 5 0 831 0 7 484
AtMYB67_II_AtMYB67_II_AthaMYB_rc_shift10 (AtMYB67_II:AtMYB67_II:AthaMYB_rc)	0.779	0.623	0.223	0.880	0.884	179	131	386	263	212	234.200		; 1_m4_assembly_4 versus AtMYB67_II_AtMYB67_II_AthaMYB_rc (AtMYB67_II:AtMYB67_II:AthaMYB_rc); m=57/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 234.2; ----------YAACyAmy ; cor=0.779; Ncor=0.623; logoDP=0.223; NsEucl=0.880; NSW=0.884; rcor=179; rNcor=131; rlogoDP=386; rNsEucl=263; rNSW=212; rank_mean=234.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 7 7 0 1 6 3 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 7 2 0 3 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 5 0 0 0 4 1 0 3
AtMYB8_II_AtMYB8_II_AthaMYB_rc_shift10 (AtMYB8_II:AtMYB8_II:AthaMYB_rc)	0.774	0.619	0.272	0.879	0.884	191	134	371	264	214	234.800		; 1_m4_assembly_4 versus AtMYB8_II_AtMYB8_II_AthaMYB_rc (AtMYB8_II:AtMYB8_II:AthaMYB_rc); m=58/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 234.8; ----------yAACyAvy ; cor=0.774; Ncor=0.619; logoDP=0.272; NsEucl=0.879; NSW=0.884; rcor=191; rNcor=134; rlogoDP=371; rNsEucl=264; rNSW=214; rank_mean=234.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 4 1.25 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 5 2 0 2.50 2.50 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.25 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 2 1 0 2.50
MYB99_MA2008.2_JASPAR_shift10 (MYB99:MA2008.2:JASPAR)	0.752	0.602	9.145	0.867	0.858	253	157	40	360	364	234.800		; 1_m4_assembly_4 versus MYB99_MA2008.2_JASPAR (MYB99:MA2008.2:JASPAR); m=59/108; ncol2=8; w=0; offset=2; strand=D; shift=10; score= 234.8; ----------CACCTAmy ; cor=0.752; Ncor=0.602; logoDP=9.145; NsEucl=0.867; NSW=0.858; rcor=253; rNcor=157; rlogoDP=40; rNsEucl=360; rNSW=364; rank_mean=234.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 987 0 0 1 1020 535 140 c 0 0 0 0 0 0 0 0 0 0 1023 1 1004 1022 0 3 372 471 g 0 0 0 0 0 0 0 0 0 0 0 26 11 1 12 0 32 35 t 0 0 0 0 0 0 0 0 0 0 0 9 8 0 1010 0 84 377
AtMYB27_II_AtMYB27_II_AthaMYB_rc_shift10 (AtMYB27_II:AtMYB27_II:AthaMYB_rc)	0.773	0.618	0.244	0.878	0.882	195	136	380	270	225	241.200		; 1_m4_assembly_4 versus AtMYB27_II_AtMYB27_II_AthaMYB_rc (AtMYB27_II:AtMYB27_II:AthaMYB_rc); m=60/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 241.2; ----------yAACyAmy ; cor=0.773; Ncor=0.618; logoDP=0.244; NsEucl=0.878; NSW=0.882; rcor=195; rNcor=136; rlogoDP=380; rNsEucl=270; rNSW=225; rank_mean=241.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 6 0 1 5 2.40 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 6 2 0 2.40 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.20 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 3 1 0 2
AtMYB10_II_AtMYB10_II_AthaMYB_rc_shift10 (AtMYB10_II:AtMYB10_II:AthaMYB_rc)	0.766	0.613	0.217	0.878	0.880	209	140	389	275	233	249.200		; 1_m4_assembly_4 versus AtMYB10_II_AtMYB10_II_AthaMYB_rc (AtMYB10_II:AtMYB10_II:AthaMYB_rc); m=61/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 249.2; ----------yAMChACY ; cor=0.766; Ncor=0.613; logoDP=0.217; NsEucl=0.878; NSW=0.880; rcor=209; rNcor=140; rlogoDP=389; rNsEucl=275; rNSW=233; rank_mean=249.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 7 5 0 2 6 1 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 7 2 0 5 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 1 0 2
AtMYB0_I_AtMYB0_I_AthaMYB_rc_shift10 (AtMYB0_I:AtMYB0_I:AthaMYB_rc)	0.762	0.609	0.394	0.876	0.878	224	146	353	284	244	250.200		; 1_m4_assembly_4 versus AtMYB0_I_AtMYB0_I_AthaMYB_rc (AtMYB0_I:AtMYB0_I:AthaMYB_rc); m=62/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 250.2; ----------yAACTkwt ; cor=0.762; Ncor=0.609; logoDP=0.394; NsEucl=0.876; NSW=0.878; rcor=224; rNcor=146; rlogoDP=353; rNsEucl=284; rNSW=244; rank_mean=250.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 1 2 1 c 0 0 0 0 0 0 0 0 0 0 2 0 0 5 0 0 0 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 2 2 3
AtMYB95_II_AtMYB95_II_AthaMYB_rc_shift10 (AtMYB95_II:AtMYB95_II:AthaMYB_rc)	0.766	0.613	0.219	0.877	0.880	211	142	387	277	235	250.400		; 1_m4_assembly_4 versus AtMYB95_II_AtMYB95_II_AthaMYB_rc (AtMYB95_II:AtMYB95_II:AthaMYB_rc); m=63/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 250.4; ----------yAAChAmY ; cor=0.766; Ncor=0.613; logoDP=0.219; NsEucl=0.877; NSW=0.880; rcor=211; rNcor=142; rlogoDP=387; rNsEucl=277; rNSW=235; rank_mean=250.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 7 6 0 2 6 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 7 2 0 4 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 3 1 0 2
MYB39_MA1769.1_JASPAR_shift7 (MYB39:MA1769.1:JASPAR)	0.713	0.509	7.522	0.887	0.872	392	280	107	204	298	256.200		; 1_m4_assembly_4 versus MYB39_MA1769.1_JASPAR (MYB39:MA1769.1:JASPAR); m=64/108; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score= 256.2; -------tyyyACCTAmy ; cor=0.713; Ncor=0.509; logoDP=7.522; NsEucl=0.887; NSW=0.872; rcor=392; rNcor=280; rlogoDP=107; rNsEucl=204; rNSW=298; rank_mean=256.200; match_rank= a 0 0 0 0 0 0 0 157 49.573 66.667 34.188 993 138 0 169 1000 554 46.154 c 0 0 0 0 0 0 0 169 309 352 670 0 856.41 1000 0 0 439 470 g 0 0 0 0 0 0 0 197 94.017 73.504 17.094 6.838 0 0 0 0 0 0 t 0 0 0 0 0 0 0 477 547 508 279 0 5.128 0 831 0 6.838 484
MYB80_MA1778.1_JASPAR_shift7 (MYB80:MA1778.1:JASPAR)	0.712	0.474	7.102	0.888	0.875	397	321	119	191	274	260.400		; 1_m4_assembly_4 versus MYB80_MA1778.1_JASPAR (MYB80:MA1778.1:JASPAR); m=65/108; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score= 260.4; -------ktyyACCTAmy ; cor=0.712; Ncor=0.474; logoDP=7.102; NsEucl=0.888; NSW=0.875; rcor=397; rNcor=321; rlogoDP=119; rNsEucl=191; rNSW=274; rank_mean=260.400; match_rank= a 0 0 0 0 0 0 0 158 62.185 100.84 62.185 998 229 0 212 1000 627 80.672 c 0 0 0 0 0 0 0 153 242 297 471 0 771 1000 8.403 0 371 392 g 0 0 0 0 0 0 0 318 136 63.866 65.546 0 0 0 5.042 0 0 8.403 t 0 0 0 0 0 0 0 371 560 538 402 1.681 0 0 774.79 0 1.681 519
AtMYB50_II_AtMYB50_II_AthaMYB_rc_shift10 (AtMYB50_II:AtMYB50_II:AthaMYB_rc)	0.761	0.609	0.240	0.875	0.876	225	147	384	293	257	261.200		; 1_m4_assembly_4 versus AtMYB50_II_AtMYB50_II_AthaMYB_rc (AtMYB50_II:AtMYB50_II:AthaMYB_rc); m=66/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 261.2; ----------yAmCwAmC ; cor=0.761; Ncor=0.609; logoDP=0.240; NsEucl=0.875; NSW=0.876; rcor=225; rNcor=147; rlogoDP=384; rNsEucl=293; rNSW=257; rank_mean=261.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 4 0 2 5 2.40 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 6 1 0 2.40 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.20 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 1 0 0
AtMYB53_II_AtMYB53_II_AthaMYB_rc_shift10 (AtMYB53_II:AtMYB53_II:AthaMYB_rc)	0.777	0.622	0.023	0.876	0.877	187	133	452	288	250	262.000		; 1_m4_assembly_4 versus AtMYB53_II_AtMYB53_II_AthaMYB_rc (AtMYB53_II:AtMYB53_II:AthaMYB_rc); m=67/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 262; ----------YAmCWAmC ; cor=0.777; Ncor=0.622; logoDP=0.023; NsEucl=0.876; NSW=0.877; rcor=187; rNcor=133; rlogoDP=452; rNsEucl=288; rNSW=250; rank_mean=262.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 2 0 1 4 2 0 c 0 0 0 0 0 0 0 0 0 0 3 0 2 4 0 0 2 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 3 0 0 0
AtMYB101_II_AtMYB101_II_AthaMYB_rc_shift10 (AtMYB101_II:AtMYB101_II:AthaMYB_rc)	0.794	0.635	0.025	0.872	0.868	150	111	431	325	311	265.600		; 1_m4_assembly_4 versus AtMYB101_II_AtMYB101_II_AthaMYB_rc (AtMYB101_II:AtMYB101_II:AthaMYB_rc); m=68/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 265.6; ----------yAACTAAC ; cor=0.794; Ncor=0.635; logoDP=0.025; NsEucl=0.872; NSW=0.868; rcor=150; rNcor=111; rlogoDP=431; rNsEucl=325; rNSW=311; rank_mean=265.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 2 2 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0
AtMYB39_II_AtMYB39_II_AthaMYB_rc_shift10 (AtMYB39_II:AtMYB39_II:AthaMYB_rc)	0.772	0.618	0.023	0.875	0.876	197	137	446	295	260	267.000		; 1_m4_assembly_4 versus AtMYB39_II_AtMYB39_II_AthaMYB_rc (AtMYB39_II:AtMYB39_II:AthaMYB_rc); m=69/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 267; ----------yAmCwAsC ; cor=0.772; Ncor=0.618; logoDP=0.023; NsEucl=0.875; NSW=0.876; rcor=197; rNcor=137; rlogoDP=446; rNsEucl=295; rNSW=260; rank_mean=267.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 2 0 1 3 0 0 c 0 0 0 0 0 0 0 0 0 0 2 0 1 3 0 0 1.50 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.50 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0
hhwccACCAACCAchw_EEAD0570_EEADannot_shift2 (hhwccACCAACCAchw:EEAD0570:EEADannot)	0.724	0.426	6.452	0.888	0.875	343	403	129	189	271	267.000		; 1_m4_assembly_4 versus hhwccACCAACCAchw_EEAD0570_EEADannot (hhwccACCAACCAchw:EEAD0570:EEADannot); m=70/108; ncol2=17; w=-6; offset=-6; strand=D; shift=2; score= 267; ---hhwccACCAACCAch ; cor=0.724; Ncor=0.426; logoDP=6.452; NsEucl=0.888; NSW=0.875; rcor=343; rNcor=403; rlogoDP=129; rNsEucl=189; rNSW=271; rank_mean=267.000; match_rank= a 0 0 - 870 925 1046 501 430 2097 338 32 2472 2531 125 259 2339 529 890 c 0 0 - 724 783 604 1370 1575 200 2229 2566 113 105 2541 2201 108 1800 895 g 0 0 0 395 330 305 289 181 117 66 16 31 50 18 37 149 82 227 t 0 0 0 750 701 784 579 553 325 106 125 123 53 55 242 143 328 727
AtMYB77_II_AtMYB77_II_AthaMYB_rc_shift10 (AtMYB77_II:AtMYB77_II:AthaMYB_rc)	0.758	0.607	0.288	0.874	0.874	235	151	368	306	285	269.000		; 1_m4_assembly_4 versus AtMYB77_II_AtMYB77_II_AthaMYB_rc (AtMYB77_II:AtMYB77_II:AthaMYB_rc); m=71/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 269; ----------TAACTahy ; cor=0.758; Ncor=0.607; logoDP=0.288; NsEucl=0.874; NSW=0.874; rcor=235; rNcor=151; rlogoDP=368; rNsEucl=306; rNSW=285; rank_mean=269.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 3 1.67 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 5 1 0 1.67 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 1 1.67 2
AtMYB9_II_AtMYB9_II_AthaMYB_rc_shift10 (AtMYB9_II:AtMYB9_II:AthaMYB_rc)	0.754	0.603	0.241	0.875	0.875	251	156	383	301	278	273.800		; 1_m4_assembly_4 versus AtMYB9_II_AtMYB9_II_AthaMYB_rc (AtMYB9_II:AtMYB9_II:AthaMYB_rc); m=72/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 273.8; ----------yAmCwAsy ; cor=0.754; Ncor=0.603; logoDP=0.241; NsEucl=0.875; NSW=0.875; rcor=251; rNcor=156; rlogoDP=383; rNsEucl=301; rNSW=278; rank_mean=273.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 4 0 2 5 0 0 c 0 0 0 0 0 0 0 0 0 0 3 0 2 6 1 0 4 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 1 0 2
AtMYB46_II_AtMYB46_II_AthaMYB_rc_shift10 (AtMYB46_II:AtMYB46_II:AthaMYB_rc)	0.756	0.605	0.025	0.873	0.870	240	153	431	317	302	288.600		; 1_m4_assembly_4 versus AtMYB46_II_AtMYB46_II_AthaMYB_rc (AtMYB46_II:AtMYB46_II:AthaMYB_rc); m=73/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 288.6; ----------yAmCWAMY ; cor=0.756; Ncor=0.605; logoDP=0.025; NsEucl=0.873; NSW=0.870; rcor=240; rNcor=153; rlogoDP=431; rNsEucl=317; rNSW=302; rank_mean=288.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 2 0 1 4 1 0 c 0 0 0 0 0 0 0 0 0 0 2 0 2 4 0 0 3 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 1
JGL_UN0403.2_JASPAR_rc_shift11 (JGL:UN0403.2:JASPAR_rc)	0.775	0.417	1.743	0.871	0.884	190	417	304	331	213	291.000		; 1_m4_assembly_4 versus JGL_UN0403.2_JASPAR_rc (JGL:UN0403.2:JASPAR_rc); m=74/108; ncol2=10; w=0; offset=3; strand=R; shift=11; score= 291; -----------AACTGra ; cor=0.775; Ncor=0.417; logoDP=1.743; NsEucl=0.871; NSW=0.884; rcor=190; rNcor=417; rlogoDP=304; rNsEucl=331; rNSW=213; rank_mean=291.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 923 993 0 0 85 382 563 c 0 0 0 0 0 0 0 0 0 0 0 27 0 988 30 87 237 190 g 0 0 0 0 0 0 0 0 0 0 0 47 0 12 7 815 267 40 t 0 0 0 0 0 0 0 0 0 0 0 3 7 0 963 13 115 207
AtMYB15_II_AtMYB15_II_AthaMYB_rc_shift10 (AtMYB15_II:AtMYB15_II:AthaMYB_rc)	0.760	0.608	0.026	0.871	0.866	227	148	429	337	326	293.400		; 1_m4_assembly_4 versus AtMYB15_II_AtMYB15_II_AthaMYB_rc (AtMYB15_II:AtMYB15_II:AthaMYB_rc); m=75/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 293.4; ----------CAmCwAvC ; cor=0.760; Ncor=0.608; logoDP=0.026; NsEucl=0.871; NSW=0.866; rcor=227; rNcor=148; rlogoDP=429; rNsEucl=337; rNSW=326; rank_mean=293.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 2 0 2 4 1 0 c 0 0 0 0 0 0 0 0 0 0 4 0 2 4 0 0 2 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0
AtMYB107_II_AtMYB107_II_AthaMYB_rc_shift10 (AtMYB107_II:AtMYB107_II:AthaMYB_rc)	0.751	0.601	0.028	0.872	0.869	257	160	425	322	309	294.600		; 1_m4_assembly_4 versus AtMYB107_II_AtMYB107_II_AthaMYB_rc (AtMYB107_II:AtMYB107_II:AthaMYB_rc); m=76/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 294.6; ----------yAAChAvy ; cor=0.751; Ncor=0.601; logoDP=0.028; NsEucl=0.872; NSW=0.869; rcor=257; rNcor=160; rlogoDP=425; rNsEucl=322; rNSW=309; rank_mean=294.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 3 1 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 3 1 0 1 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 1
AtMYB20_II_AtMYB20_II_AthaMYB_rc_shift10 (AtMYB20_II:AtMYB20_II:AthaMYB_rc)	0.740	0.592	0.310	0.871	0.866	298	175	364	334	321	298.400		; 1_m4_assembly_4 versus AtMYB20_II_AtMYB20_II_AthaMYB_rc (AtMYB20_II:AtMYB20_II:AthaMYB_rc); m=77/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 298.4; ----------yAAChWvY ; cor=0.740; Ncor=0.592; logoDP=0.310; NsEucl=0.871; NSW=0.866; rcor=298; rNcor=175; rlogoDP=364; rNsEucl=334; rNSW=321; rank_mean=298.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 3 1.33 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 2 0 1.33 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.33 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 1 0 1
AtMYB68_II_AtMYB68_II_AthaMYB_rc_shift10 (AtMYB68_II:AtMYB68_II:AthaMYB_rc)	0.759	0.607	0.025	0.869	0.864	233	150	431	344	337	299.000		; 1_m4_assembly_4 versus AtMYB68_II_AtMYB68_II_AthaMYB_rc (AtMYB68_II:AtMYB68_II:AthaMYB_rc); m=78/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 299; ----------yAmCTACy ; cor=0.759; Ncor=0.607; logoDP=0.025; NsEucl=0.869; NSW=0.864; rcor=233; rNcor=150; rlogoDP=431; rNsEucl=344; rNSW=337; rank_mean=299.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 2 0 0 c 0 0 0 0 0 0 0 0 0 0 1 0 1 2 0 0 2 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 1
WRKY28_MA1311.3_JASPAR_shift7 (WRKY28:MA1311.3:JASPAR)	0.778	0.424	6.174	0.849	0.864	183	408	143	427	336	299.400		; 1_m4_assembly_4 versus WRKY28_MA1311.3_JASPAR (WRKY28:MA1311.3:JASPAR); m=79/108; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 299.4; -------rGTCAAC---- ; cor=0.778; Ncor=0.424; logoDP=6.174; NsEucl=0.849; NSW=0.864; rcor=183; rNcor=408; rlogoDP=143; rNsEucl=427; rNSW=336; rank_mean=299.400; match_rank= a 0 0 0 0 0 0 0 919 21 6 12 2059 2050 158 0 0 0 0 c 0 0 0 0 0 0 0 67 11 8 2062 17 7 1730 0 0 0 0 g 0 0 0 0 0 0 0 924 2047 1 8 6 18 55 0 0 0 0 t 0 0 0 0 0 0 0 182 13 2077 10 10 17 149 0 0 0 0
AtMYB113_II_AtMYB113_II_AthaMYB_rc_shift10 (AtMYB113_II:AtMYB113_II:AthaMYB_rc)	0.750	0.600	0.031	0.871	0.866	258	161	424	334	321	299.600		; 1_m4_assembly_4 versus AtMYB113_II_AtMYB113_II_AthaMYB_rc (AtMYB113_II:AtMYB113_II:AthaMYB_rc); m=80/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 299.6; ----------YAAChAvY ; cor=0.750; Ncor=0.600; logoDP=0.031; NsEucl=0.871; NSW=0.866; rcor=258; rNcor=161; rlogoDP=424; rNsEucl=334; rNSW=321; rank_mean=299.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 4 1.33 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 4 1 0 1.33 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.33 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 2 0 0 1
AtMYB22_II_AtMYB22_II_AthaMYB_rc_shift10 (AtMYB22_II:AtMYB22_II:AthaMYB_rc)	0.755	0.604	0.025	0.868	0.862	246	154	431	350	346	305.400		; 1_m4_assembly_4 versus AtMYB22_II_AtMYB22_II_AthaMYB_rc (AtMYB22_II:AtMYB22_II:AthaMYB_rc); m=81/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 305.4; ----------yAACwArC ; cor=0.755; Ncor=0.604; logoDP=0.025; NsEucl=0.868; NSW=0.862; rcor=246; rNcor=154; rlogoDP=431; rNsEucl=350; rNSW=346; rank_mean=305.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 2 0 1 2 1 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0
MS188.DAP_M0515_AthalianaCistrome_rc_shift7 (MS188.DAP:M0515:AthalianaCistrome_rc)	0.712	0.474	0.603	0.888	0.875	399	322	340	192	275	305.600		; 1_m4_assembly_4 versus MS188.DAP_M0515_AthalianaCistrome_rc (MS188.DAP:M0515:AthalianaCistrome_rc); m=82/108; ncol2=15; w=-1; offset=-1; strand=R; shift=7; score= 305.6; -------ktyyACCTAmy ; cor=0.712; Ncor=0.474; logoDP=0.603; NsEucl=0.888; NSW=0.875; rcor=399; rNcor=322; rlogoDP=340; rNsEucl=192; rNSW=275; rank_mean=305.600; match_rank= a 0 0 0 0 0 0 0 94 37 60 37 594 136 0 126 595 373 48 c 0 0 0 0 0 0 0 91 144 177 280 0 459 595 5 0 221 233 g 0 0 0 0 0 0 0 189 81 38 39 0 0 0 3 0 0 5 t 0 0 0 0 0 0 0 221 333 320 239 1 0 0 461 0 1 309
AtMYB84_II_AtMYB84_II_AthaMYB_rc_shift10 (AtMYB84_II:AtMYB84_II:AthaMYB_rc)	0.778	0.467	5.765	0.833	0.833	184	337	162	450	433	313.200		; 1_m4_assembly_4 versus AtMYB84_II_AtMYB84_II_AthaMYB_rc (AtMYB84_II:AtMYB84_II:AthaMYB_rc); m=83/108; ncol2=6; w=0; offset=2; strand=R; shift=10; score= 313.2; ----------TAACTA-- ; cor=0.778; Ncor=0.467; logoDP=5.765; NsEucl=0.833; NSW=0.833; rcor=184; rNcor=337; rlogoDP=162; rNsEucl=450; rNSW=433; rank_mean=313.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0
AtMYB23_II_AtMYB23_II_AthaMYB_rc_shift10 (AtMYB23_II:AtMYB23_II:AthaMYB_rc)	0.737	0.590	0.310	0.866	0.857	309	179	364	362	365	315.800		; 1_m4_assembly_4 versus AtMYB23_II_AtMYB23_II_AthaMYB_rc (AtMYB23_II:AtMYB23_II:AthaMYB_rc); m=84/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 315.8; ----------yAAChWRC ; cor=0.737; Ncor=0.590; logoDP=0.310; NsEucl=0.866; NSW=0.857; rcor=309; rNcor=179; rlogoDP=364; rNsEucl=362; rNSW=365; rank_mean=315.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 3 3 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 4 1 0 0 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0
MYB39.DAP_M0557_AthalianaCistrome_rc_shift7 (MYB39.DAP:M0557:AthalianaCistrome_rc)	0.713	0.509	0.058	0.887	0.872	389	279	419	202	296	317.000		; 1_m4_assembly_4 versus MYB39.DAP_M0557_AthalianaCistrome_rc (MYB39.DAP:M0557:AthalianaCistrome_rc); m=85/108; ncol2=14; w=-1; offset=-1; strand=R; shift=7; score= 317; -------tyyyACCTAmy ; cor=0.713; Ncor=0.509; logoDP=0.058; NsEucl=0.887; NSW=0.872; rcor=389; rNcor=279; rlogoDP=419; rNsEucl=202; rNSW=296; rank_mean=317.000; match_rank= a 0 0 0 0 0 0 0 92 29 39 20 581 81 0 99 585 324 27 c 0 0 0 0 0 0 0 99 181 206 392 0 501 585 0 0 257 275 g 0 0 0 0 0 0 0 115 55 43 10 4 0 0 0 0 0 0 t 0 0 0 0 0 0 0 279 320 297 163 0 3 0 486 0 4 283
AtMYB66_II_AtMYB66_II_AthaMYB_rc_shift10 (AtMYB66_II:AtMYB66_II:AthaMYB_rc)	0.735	0.588	0.279	0.867	0.859	318	183	369	357	359	317.200		; 1_m4_assembly_4 versus AtMYB66_II_AtMYB66_II_AthaMYB_rc (AtMYB66_II:AtMYB66_II:AthaMYB_rc); m=86/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 317.2; ----------TAACyAmy ; cor=0.735; Ncor=0.588; logoDP=0.279; NsEucl=0.867; NSW=0.859; rcor=318; rNcor=183; rlogoDP=369; rNsEucl=357; rNSW=359; rank_mean=317.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 4 2.50 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 5 2 0 2.50 2.50 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 3 1 0 2.50
AtMYB89_II_AtMYB89_II_AthaMYB_rc_shift10 (AtMYB89_II:AtMYB89_II:AthaMYB_rc)	0.728	0.582	0.269	0.869	0.862	337	194	373	348	345	319.400		; 1_m4_assembly_4 versus AtMYB89_II_AtMYB89_II_AthaMYB_rc (AtMYB89_II:AtMYB89_II:AthaMYB_rc); m=87/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 319.4; ----------yAACmAvC ; cor=0.728; Ncor=0.582; logoDP=0.269; NsEucl=0.869; NSW=0.862; rcor=337; rNcor=194; rlogoDP=373; rNsEucl=348; rNSW=345; rank_mean=319.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 4 0 2 4 1.25 0 c 0 0 0 0 0 0 0 0 0 0 3 0 1 5 2 0 2.50 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.25 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 1 0 1
AtMYB26_II_AtMYB26_II_AthaMYB_rc_shift10 (AtMYB26_II:AtMYB26_II:AthaMYB_rc)	0.746	0.597	0.028	0.865	0.855	273	166	425	366	368	319.600		; 1_m4_assembly_4 versus AtMYB26_II_AtMYB26_II_AthaMYB_rc (AtMYB26_II:AtMYB26_II:AthaMYB_rc); m=88/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 319.6; ----------yAACwArC ; cor=0.746; Ncor=0.597; logoDP=0.028; NsEucl=0.865; NSW=0.855; rcor=273; rNcor=166; rlogoDP=425; rNsEucl=366; rNSW=368; rank_mean=319.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 3 1.50 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.50 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 0
AtMYB5_II_AtMYB5_II_AthaMYB_rc_shift10 (AtMYB5_II:AtMYB5_II:AthaMYB_rc)	0.727	0.581	0.317	0.867	0.858	341	195	363	358	362	323.800		; 1_m4_assembly_4 versus AtMYB5_II_AtMYB5_II_AthaMYB_rc (AtMYB5_II:AtMYB5_II:AthaMYB_rc); m=89/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 323.8; ----------YAAChWvY ; cor=0.727; Ncor=0.581; logoDP=0.317; NsEucl=0.867; NSW=0.858; rcor=341; rNcor=195; rlogoDP=363; rNsEucl=358; rNSW=362; rank_mean=323.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 1 3 1.33 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 4 1 0 1.33 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.33 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 2 1 0 1
AtMYB78_II_AtMYB78_II_AthaMYB_rc_shift10 (AtMYB78_II:AtMYB78_II:AthaMYB_rc)	0.728	0.582	0.370	0.865	0.855	336	193	357	366	368	324.000		; 1_m4_assembly_4 versus AtMYB78_II_AtMYB78_II_AthaMYB_rc (AtMYB78_II:AtMYB78_II:AthaMYB_rc); m=90/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 324; ----------yAAChwrC ; cor=0.728; Ncor=0.582; logoDP=0.370; NsEucl=0.865; NSW=0.855; rcor=336; rNcor=193; rlogoDP=357; rNsEucl=366; rNSW=368; rank_mean=324.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 2 1.50 0 c 0 0 0 0 0 0 0 0 0 0 2 0 0 3 1 0 0 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.50 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0
AtMYB114_II_AtMYB114_II_AthaMYB_rc_shift10 (AtMYB114_II:AtMYB114_II:AthaMYB_rc)	0.737	0.590	0.028	0.868	0.860	311	181	425	355	354	325.200		; 1_m4_assembly_4 versus AtMYB114_II_AtMYB114_II_AthaMYB_rc (AtMYB114_II:AtMYB114_II:AthaMYB_rc); m=91/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 325.2; ----------yAAChAsy ; cor=0.737; Ncor=0.590; logoDP=0.028; NsEucl=0.868; NSW=0.860; rcor=311; rNcor=181; rlogoDP=425; rNsEucl=355; rNSW=354; rank_mean=325.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 0 1 3 0 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 3 1 0 1.50 1.50 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.50 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 1.50
MYB83_MA1779.2_JASPAR_shift7 (MYB83:MA1779.2:JASPAR)	0.727	0.463	4.947	0.858	0.859	339	342	190	403	360	326.800		; 1_m4_assembly_4 versus MYB83_MA1779.2_JASPAR (MYB83:MA1779.2:JASPAR); m=92/108; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 326.8; -------CACCAACm--- ; cor=0.727; Ncor=0.463; logoDP=4.947; NsEucl=0.858; NSW=0.859; rcor=339; rNcor=342; rlogoDP=190; rNsEucl=403; rNSW=360; rank_mean=326.800; match_rank= a 0 0 0 0 0 0 0 109 1000 232 0 849 823 184 291 0 0 0 c 0 0 0 0 0 0 0 811 0 759 993 14 125 801 489 0 0 0 g 0 0 0 0 0 0 0 5 0 9 0 7 52 14 17 0 0 0 t 0 0 0 0 0 0 0 76 0 0 7 130 0 0 203 0 0 0
LOC_Os08g37970.1_MYB_2_AT1G34670_EEAD0633_EEADannot_rc_shift10 (LOC_Os08g37970.1_MYB_2_AT1G34670:EEAD0633:EEADannot_rc)	0.733	0.586	0.018	0.868	0.861	322	189	454	353	349	333.400		; 1_m4_assembly_4 versus LOC_Os08g37970.1_MYB_2_AT1G34670_EEAD0633_EEADannot_rc (LOC_Os08g37970.1_MYB_2_AT1G34670:EEAD0633:EEADannot_rc); m=93/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 333.4; ----------yACCTAmy ; cor=0.733; Ncor=0.586; logoDP=0.018; NsEucl=0.868; NSW=0.861; rcor=322; rNcor=189; rlogoDP=454; rNsEucl=353; rNSW=349; rank_mean=333.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 6 100 21 0 22 100 49 1 c 0 0 0 0 0 0 0 0 0 0 58 0 79 100 7 0 51 44 g 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 33 0 0 0 71 0 0 55
AtMYB63_II_AtMYB63_II_AthaMYB_rc_shift10 (AtMYB63_II:AtMYB63_II:AthaMYB_rc)	0.736	0.589	0.023	0.867	0.858	313	182	452	359	363	333.800		; 1_m4_assembly_4 versus AtMYB63_II_AtMYB63_II_AthaMYB_rc (AtMYB63_II:AtMYB63_II:AthaMYB_rc); m=94/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 333.8; ----------YAmCwAvC ; cor=0.736; Ncor=0.589; logoDP=0.023; NsEucl=0.867; NSW=0.858; rcor=313; rNcor=182; rlogoDP=452; rNsEucl=359; rNSW=363; rank_mean=333.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 2 0 2 4 1 0 c 0 0 0 0 0 0 0 0 0 0 3 0 2 4 0 0 2 4 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0
AtMYB58_II_AtMYB58_II_AthaMYB_rc_shift10 (AtMYB58_II:AtMYB58_II:AthaMYB_rc)	0.738	0.590	0.026	0.863	0.849	307	178	429	375	390	335.800		; 1_m4_assembly_4 versus AtMYB58_II_AtMYB58_II_AthaMYB_rc (AtMYB58_II:AtMYB58_II:AthaMYB_rc); m=95/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 335.8; ----------CAmCwAmC ; cor=0.738; Ncor=0.590; logoDP=0.026; NsEucl=0.863; NSW=0.849; rcor=307; rNcor=178; rlogoDP=429; rNsEucl=375; rNSW=390; rank_mean=335.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 1 0 1 3 1 0 c 0 0 0 0 0 0 0 0 0 0 3 0 2 3 0 0 2 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0
AtMYB63_I_AtMYB63_I_AthaMYB_rc_shift10 (AtMYB63_I:AtMYB63_I:AthaMYB_rc)	0.715	0.572	0.392	0.862	0.847	376	204	354	383	395	342.400		; 1_m4_assembly_4 versus AtMYB63_I_AtMYB63_I_AthaMYB_rc (AtMYB63_I:AtMYB63_I:AthaMYB_rc); m=96/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 342.4; ----------YAACTddY ; cor=0.715; Ncor=0.572; logoDP=0.392; NsEucl=0.862; NSW=0.847; rcor=376; rNcor=204; rlogoDP=354; rNsEucl=383; rNSW=395; rank_mean=342.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 1 2 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 0 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 t 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 2 1 3
WRKY75_MA1093.2_JASPAR_shift7 (WRKY75:MA1093.2:JASPAR)	0.739	0.403	6.249	0.838	0.843	301	449	138	442	406	347.200		; 1_m4_assembly_4 versus WRKY75_MA1093.2_JASPAR (WRKY75:MA1093.2:JASPAR); m=97/108; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 347.2; -------rGTCAAm---- ; cor=0.739; Ncor=0.403; logoDP=6.249; NsEucl=0.838; NSW=0.843; rcor=301; rNcor=449; rlogoDP=138; rNsEucl=442; rNSW=406; rank_mean=347.200; match_rank= a 0 0 0 0 0 0 0 500 0 0 0 1000 1000 260 0 0 0 0 c 0 0 0 0 0 0 0 17 0 0 1000 0 0 620 0 0 0 0 g 0 0 0 0 0 0 0 483 1000 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 1000 0 0 0 120 0 0 0 0
ZFP5_M0369_1.02_CISBP_shift7 (ZFP5:M0369_1.02:CISBP)	0.732	0.466	1.634	0.857	0.856	326	338	308	412	366	350.000		; 1_m4_assembly_4 versus ZFP5_M0369_1.02_CISBP (ZFP5:M0369_1.02:CISBP); m=98/108; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 350; -------wkbdAwst--- ; cor=0.732; Ncor=0.466; logoDP=1.634; NsEucl=0.857; NSW=0.856; rcor=326; rNcor=338; rlogoDP=308; rNsEucl=412; rNSW=366; rank_mean=350.000; match_rank= a 0 0 0 0 0 0 0 25 21 23 26 76 65 5 19 0 0 0 c 0 0 0 0 0 0 0 24 24 25 18 4 0 53 22 0 0 0 g 0 0 0 0 0 0 0 24 27 25 31 9 6 40 7 0 0 0 t 0 0 0 0 0 0 0 27 28 27 25 11 29 2 52 0 0 0
NAC057_MA2034.2_JASPAR_shift10 (NAC057:MA2034.2:JASPAR)	0.705	0.494	6.163	0.839	0.818	423	294	144	440	450	350.200		; 1_m4_assembly_4 versus NAC057_MA2034.2_JASPAR (NAC057:MA2034.2:JASPAR); m=99/108; ncol2=7; w=0; offset=2; strand=D; shift=10; score= 350.2; ----------CAAGTAA- ; cor=0.705; Ncor=0.494; logoDP=6.163; NsEucl=0.839; NSW=0.818; rcor=423; rNcor=294; rlogoDP=144; rNsEucl=440; rNSW=450; rank_mean=350.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 36 2461 2158 30 33 2146 2337 0 c 0 0 0 0 0 0 0 0 0 0 2380 36 269 8 95 54 55 0 g 0 0 0 0 0 0 0 0 0 0 22 35 61 2524 42 10 35 0 t 0 0 0 0 0 0 0 0 0 0 144 50 94 20 2412 372 155 0
WRKY60_MA1090.2_JASPAR_shift7 (WRKY60:MA1090.2:JASPAR)	0.738	0.402	6.145	0.838	0.843	306	452	146	443	407	350.800		; 1_m4_assembly_4 versus WRKY60_MA1090.2_JASPAR (WRKY60:MA1090.2:JASPAR); m=100/108; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 350.8; -------GGTCAAm---- ; cor=0.738; Ncor=0.402; logoDP=6.145; NsEucl=0.838; NSW=0.843; rcor=306; rNcor=452; rlogoDP=146; rNsEucl=443; rNSW=407; rank_mean=350.800; match_rank= a 0 0 0 0 0 0 0 136 0 0 0 1000 1000 258 0 0 0 0 c 0 0 0 0 0 0 0 22 0 0 1000 0 0 608 0 0 0 0 g 0 0 0 0 0 0 0 820 1000 0 0 0 0 67 0 0 0 0 t 0 0 0 0 0 0 0 22 0 1000 0 0 0 67 0 0 0 0
AtMYB87_II_AtMYB87_II_AthaMYB_rc_shift10 (AtMYB87_II:AtMYB87_II:AthaMYB_rc)	0.731	0.585	0.052	0.858	0.839	330	191	420	400	419	352.000		; 1_m4_assembly_4 versus AtMYB87_II_AtMYB87_II_AthaMYB_rc (AtMYB87_II:AtMYB87_II:AthaMYB_rc); m=101/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 352; ----------TAACTAmy ; cor=0.731; Ncor=0.585; logoDP=0.052; NsEucl=0.858; NSW=0.839; rcor=330; rNcor=191; rlogoDP=420; rNsEucl=400; rNSW=419; rank_mean=352.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 2 1 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 1
AtMYB41_II_AtMYB41_II_AthaMYB_rc_shift10 (AtMYB41_II:AtMYB41_II:AthaMYB_rc)	0.707	0.566	0.279	0.862	0.849	417	212	369	377	391	353.200		; 1_m4_assembly_4 versus AtMYB41_II_AtMYB41_II_AthaMYB_rc (AtMYB41_II:AtMYB41_II:AthaMYB_rc); m=102/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 353.2; ----------TAACyAvy ; cor=0.707; Ncor=0.566; logoDP=0.279; NsEucl=0.862; NSW=0.849; rcor=417; rNcor=212; rlogoDP=369; rNsEucl=377; rNSW=391; rank_mean=353.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 4 1.25 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 5 2 0 2.50 2.50 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.25 0 t 0 0 0 0 0 0 0 0 0 0 4 0 0 0 2 1 0 2.50
NAC017_MA1674.3_JASPAR_shift10 (NAC017:MA1674.3:JASPAR)	0.701	0.491	6.463	0.837	0.814	448	299	128	448	453	355.200		; 1_m4_assembly_4 versus NAC017_MA1674.3_JASPAR (NAC017:MA1674.3:JASPAR); m=103/108; ncol2=7; w=0; offset=2; strand=D; shift=10; score= 355.2; ----------CAAGTAA- ; cor=0.701; Ncor=0.491; logoDP=6.463; NsEucl=0.837; NSW=0.814; rcor=448; rNcor=299; rlogoDP=128; rNsEucl=448; rNSW=453; rank_mean=355.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 12 990 879 9 127 917 928 0 c 0 0 0 0 0 0 0 0 0 0 957 1 92 4 72 24 4 0 g 0 0 0 0 0 0 0 0 0 0 9 0 7 978 60 6 6 0 t 0 0 0 0 0 0 0 0 0 0 19 6 19 6 738 50 59 0
WRKY53_MA1805.2_JASPAR_shift7 (WRKY53:MA1805.2:JASPAR)	0.735	0.401	4.478	0.843	0.853	319	453	203	435	377	357.400		; 1_m4_assembly_4 versus WRKY53_MA1805.2_JASPAR (WRKY53:MA1805.2:JASPAR); m=104/108; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 357.4; -------rGTCAAC---- ; cor=0.735; Ncor=0.401; logoDP=4.478; NsEucl=0.843; NSW=0.853; rcor=319; rNcor=453; rlogoDP=203; rNsEucl=435; rNSW=377; rank_mean=357.400; match_rank= a 0 0 0 0 0 0 0 426 8 0 46 896 896 85 0 0 0 0 c 0 0 0 0 0 0 0 115 0 0 950 56 8 706 0 0 0 0 g 0 0 0 0 0 0 0 402 980 1 1 10 76 56 0 0 0 0 t 0 0 0 0 0 0 0 57 12 998 2 39 21 153 0 0 0 0
ZFP8_M0371_1.02_CISBP_rc_shift6 (ZFP8:M0371_1.02:CISBP_rc)	0.758	0.442	0.048	0.855	0.854	238	377	422	416	374	365.400		; 1_m4_assembly_4 versus ZFP8_M0371_1.02_CISBP_rc (ZFP8:M0371_1.02:CISBP_rc); m=105/108; ncol2=9; w=-2; offset=-2; strand=R; shift=6; score= 365.4; ------rhkbdawsw--- ; cor=0.758; Ncor=0.442; logoDP=0.048; NsEucl=0.855; NSW=0.854; rcor=238; rNcor=377; rlogoDP=422; rNsEucl=416; rNSW=374; rank_mean=365.400; match_rank= a 0 0 0 0 0 0 29 26 23 23 26 66 65 8 26 0 0 0 c 0 0 0 0 0 0 22 26 24 25 19 10 0 56 14 0 0 0 g 0 0 0 0 0 0 25 23 26 25 29 10 8 32 14 0 0 0 t 0 0 0 0 0 0 24 25 27 27 26 14 27 4 46 0 0 0
NAC002_MA2015.2_JASPAR_shift7 (NAC002:MA2015.2:JASPAR)	0.702	0.447	4.639	0.850	0.842	445	369	198	425	409	369.200		; 1_m4_assembly_4 versus NAC002_MA2015.2_JASPAR (NAC002:MA2015.2:JASPAR); m=106/108; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 369.2; -------ACGcAACT--- ; cor=0.702; Ncor=0.447; logoDP=4.639; NsEucl=0.850; NSW=0.842; rcor=445; rNcor=369; rlogoDP=198; rNsEucl=425; rNSW=409; rank_mean=369.200; match_rank= a 0 0 0 0 0 0 0 1143 31 38 47 1066 1070 26 69 0 0 0 c 0 0 0 0 0 0 0 12 1096 13 753 58 16 1013 144 0 0 0 g 0 0 0 0 0 0 0 3 14 1089 103 13 16 64 63 0 0 0 t 0 0 0 0 0 0 0 11 28 29 266 32 67 66 893 0 0 0
AtMYB76_II_AtMYB76_II_AthaMYB_rc_shift10 (AtMYB76_II:AtMYB76_II:AthaMYB_rc)	0.702	0.562	0.023	0.857	0.836	442	215	446	407	426	387.200		; 1_m4_assembly_4 versus AtMYB76_II_AtMYB76_II_AthaMYB_rc (AtMYB76_II:AtMYB76_II:AthaMYB_rc); m=107/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 387.2; ----------yAmCwACy ; cor=0.702; Ncor=0.562; logoDP=0.023; NsEucl=0.857; NSW=0.836; rcor=442; rNcor=215; rlogoDP=446; rNsEucl=407; rNSW=426; rank_mean=387.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 1 0 1 3 0 0 c 0 0 0 0 0 0 0 0 0 0 2 0 2 3 0 0 3 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 1
AtMYB123_II_AtMYB123_II_AthaMYB_rc_shift10 (AtMYB123_II:AtMYB123_II:AthaMYB_rc)	0.705	0.564	0.025	0.851	0.823	426	213	431	423	447	388.000		; 1_m4_assembly_4 versus AtMYB123_II_AtMYB123_II_AthaMYB_rc (AtMYB123_II:AtMYB123_II:AthaMYB_rc); m=108/108; ncol2=8; w=0; offset=2; strand=R; shift=10; score= 388; ----------yAACwAGC ; cor=0.705; Ncor=0.564; logoDP=0.025; NsEucl=0.851; NSW=0.823; rcor=426; rNcor=213; rlogoDP=431; rNsEucl=423; rNSW=447; rank_mean=388.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 2 0 1 2 0 0 c 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 t 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0

One-to-n matrix alignment; reference matrix: 1_m7_assembly_7_shift3 ; 88 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
1_m7_assembly_7_shift3 (assembly_7)
; 1_m7_assembly_7 (assembly_7); m=0 (reference); ncol1=10; shift=3; ncol=13; ---wmAAAGACww ; Alignment reference a 0 0 0 97 101 248 248 248 0 248 0 96 96 c 0 0 0 42 63 0 0 0 0 0 248 45 33 g 0 0 0 34 35 0 0 0 248 0 0 28 44 t 0 0 0 75 49 0 0 0 0 0 0 79 75

SGR5_MA1159.2_JASPAR_shift2 (SGR5:MA1159.2:JASPAR) 0.825 0.635 7.687 0.907 0.913 94 112 97 59 83 89.000 50
; 1_m7_assembly_7 versus SGR5_MA1159.2_JASPAR (SGR5:MA1159.2:JASPAR); m=1/87; ncol2=13; w=-1; offset=-1; strand=D; shift=2; score= 89; --raAwAAGACAA ; cor=0.825; Ncor=0.635; logoDP=7.687; NsEucl=0.907; NSW=0.913; rcor=94; rNcor=112; rlogoDP=97; rNsEucl=59; rNSW=83; rank_mean=89.000; match_rank=50 a 0 0 343 340 433 310 486 532 33 591 0 592 598 c 0 0 57 48 0 16 22 4 0 6 599 1 1 g 0 0 160 116 44 27 92 22 566 0 1 7 0 t 0 0 40 96 123 247 0 42 1 3 0 0 1

SGR5_MA1159.1_JASPAR_shift1 (SGR5:MA1159.1:JASPAR) 0.825 0.550 7.687 0.907 0.913 94 230 97 59 83 112.600
; 1_m7_assembly_7 versus SGR5_MA1159.1_JASPAR (SGR5:MA1159.1:JASPAR); m=2/87; ncol2=15; w=-2; offset=-2; strand=D; shift=1; score= 112.6; -araAwAAGACAA ; cor=0.825; Ncor=0.550; logoDP=7.687; NsEucl=0.907; NSW=0.913; rcor=94; rNcor=230; rlogoDP=97; rNsEucl=59; rNSW=83; rank_mean=112.600; match_rank= a 0 293 343 340 433 310 486 532 33 591 0 592 598 c 0 126 57 48 0 16 22 4 0 6 599 1 1 g 0 40 160 116 44 27 92 22 566 0 1 7 0 t 0 141 40 96 123 247 0 42 1 3 0 0 1

DOF5.3_MA1071.1_JASPAR_shift2 (DOF5.3:MA1071.1:JASPAR) 0.950 0.518 3.023 0.920 0.962 3 266 275 24 9 115.400
; 1_m7_assembly_7 versus DOF5.3_MA1071.1_JASPAR (DOF5.3:MA1071.1:JASPAR); m=3/87; ncol2=7; w=-1; offset=-1; strand=D; shift=2; score= 115.4; --gawAAmG---- ; cor=0.950; Ncor=0.518; logoDP=3.023; NsEucl=0.920; NSW=0.962; rcor=3; rNcor=266; rlogoDP=275; rNsEucl=24; rNSW=9; rank_mean=115.400; match_rank= a 0 0 247 327 396 842 850 611 66 0 0 0 0 c 0 0 247 213 128 61 79 329 52 0 0 0 0 g 0 0 262 228 146 17 0 14 767 0 0 0 0 t 0 0 244 233 331 81 70 47 116 0 0 0 0

TMO6_M0654_1.02_CISBP_shift2 (TMO6:M0654_1.02:CISBP) 0.950 0.518 2.998 0.920 0.961 4 268 278 25 11 117.200
; 1_m7_assembly_7 versus TMO6_M0654_1.02_CISBP (TMO6:M0654_1.02:CISBP); m=4/87; ncol2=7; w=-1; offset=-1; strand=D; shift=2; score= 117.2; --vawAAmG---- ; cor=0.950; Ncor=0.518; logoDP=2.998; NsEucl=0.920; NSW=0.961; rcor=4; rNcor=268; rlogoDP=278; rNsEucl=25; rNSW=11; rank_mean=117.200; match_rank= a 0 0 25 33 40 84 85 61 7 0 0 0 0 c 0 0 25 21 13 6 8 33 5 0 0 0 0 g 0 0 26 23 14 2 0 1 76 0 0 0 0 t 0 0 24 23 33 8 7 5 12 0 0 0 0

DOF2.2_MA1272.3_JASPAR_shift3 (DOF2.2:MA1272.3:JASPAR) 0.887 0.532 7.752 0.884 0.919 35 252 92 230 68 135.400
; 1_m7_assembly_7 versus DOF2.2_MA1272.3_JASPAR (DOF2.2:MA1272.3:JASPAR); m=5/87; ncol2=6; w=0; offset=0; strand=D; shift=3; score= 135.4; ---AAAAAG---- ; cor=0.887; Ncor=0.532; logoDP=7.752; NsEucl=0.884; NSW=0.919; rcor=35; rNcor=252; rlogoDP=92; rNsEucl=230; rNSW=68; rank_mean=135.400; match_rank= a 0 0 0 1086 1077 1086 1084 1086 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 1086 0 0 0 0 t 0 0 0 0 9 0 2 0 0 0 0 0 0

SGR5.ampDAP_M0303_AthalianaCistrome_rc_shift0 (SGR5.ampDAP:M0303:AthalianaCistrome_rc) 0.818 0.546 0.365 0.907 0.913 103 234 358 61 85 168.200
; 1_m7_assembly_7 versus SGR5.ampDAP_M0303_AthalianaCistrome_rc (SGR5.ampDAP:M0303:AthalianaCistrome_rc); m=6/87; ncol2=15; w=-3; offset=-3; strand=R; shift=0; score= 168.2; aaraawrAGACAA ; cor=0.818; Ncor=0.546; logoDP=0.365; NsEucl=0.907; NSW=0.913; rcor=103; rNcor=234; rlogoDP=358; rNsEucl=61; rNSW=85; rank_mean=168.200; match_rank= a 201 274 297 317 405 309 406 516 30 597 0 595 582 c 137 119 81 69 5 44 34 0 0 1 598 0 2 g 112 88 161 126 45 59 158 39 568 0 0 3 14 t 148 117 59 86 143 186 0 43 0 0 0 0 0

ARF34_EEAD0036_EEADannot_shift7 (ARF34:EEAD0036:EEADannot) 0.886 0.443 6.221 0.880 0.928 36 374 140 260 52 172.400
; 1_m7_assembly_7 versus ARF34_EEAD0036_EEADannot (ARF34:EEAD0036:EEADannot); m=7/87; ncol2=5; w=0; offset=4; strand=D; shift=7; score= 172.4; -------aGACA- ; cor=0.886; Ncor=0.443; logoDP=6.221; NsEucl=0.880; NSW=0.928; rcor=36; rNcor=374; rlogoDP=140; rNsEucl=260; rNSW=52; rank_mean=172.400; match_rank= a 0 0 0 0 0 0 0 2916 0 4525 0 4525 0 c 0 0 0 0 0 0 0 1126 0 0 4525 0 0 g 0 0 0 0 0 0 0 328 4525 0 0 0 0 t 0 0 0 0 0 0 0 156 0 0 0 0 0

IDD4_MA1371.2_JASPAR_shift1 (IDD4:MA1371.2:JASPAR) 0.780 0.520 7.610 0.893 0.886 175 264 100 138 201 175.600
; 1_m7_assembly_7 versus IDD4_MA1371.2_JASPAR (IDD4:MA1371.2:JASPAR); m=8/87; ncol2=15; w=-2; offset=-2; strand=D; shift=1; score= 175.6; -AsAAAAmGACAA ; cor=0.780; Ncor=0.520; logoDP=7.610; NsEucl=0.893; NSW=0.886; rcor=175; rNcor=264; rlogoDP=100; rNsEucl=138; rNSW=201; rank_mean=175.600; match_rank= a 0 429 57 430 510 470 529 186 16 580 0 585 581 c 0 5 250 0 0 29 42 301 0 10 591 0 3 g 0 140 242 14 0 78 16 78 575 0 0 6 7 t 0 17 42 147 81 14 4 26 0 1 0 0 0

DOF5.7_DOF5.7_ArabidopsisPBM_shift3 (DOF5.7:DOF5.7:ArabidopsisPBM) 0.733 0.733 4.194 0.896 0.891 323 42 227 126 172 178.000
; 1_m7_assembly_7 versus DOF5.7_DOF5.7_ArabidopsisPBM (DOF5.7:DOF5.7:ArabidopsisPBM); m=9/87; ncol2=10; w=0; offset=0; strand=D; shift=3; score= 178; ---raAAArrkgr ; cor=0.733; Ncor=0.733; logoDP=4.194; NsEucl=0.896; NSW=0.891; rcor=323; rNcor=42; rlogoDP=227; rNsEucl=126; rNSW=172; rank_mean=178.000; match_rank= a 0 0 0 39 45 68 97 90 36 48 10 17 29 c 0 0 0 21 9 2 0 0 4 7 19 21 22 g 0 0 0 27 22 6 1 8 59 44 46 41 31 t 0 0 0 13 24 24 2 2 1 1 25 21 18

MGP_MA1158.2_JASPAR_shift3 (MGP:MA1158.2:JASPAR) 0.761 0.585 7.908 0.889 0.876 226 190 82 180 256 186.800
; 1_m7_assembly_7 versus MGP_MA1158.2_JASPAR (MGP:MA1158.2:JASPAR); m=10/87; ncol2=13; w=0; offset=0; strand=D; shift=3; score= 186.8; ---aAAAmGACAA ; cor=0.761; Ncor=0.585; logoDP=7.908; NsEucl=0.889; NSW=0.876; rcor=226; rNcor=190; rlogoDP=82; rNsEucl=180; rNSW=256; rank_mean=186.800; match_rank= a 0 0 0 402 512 421 552 153 0 593 0 578 587 c 0 0 0 15 0 26 21 379 0 0 594 0 3 g 0 0 0 50 2 73 20 52 594 1 0 16 4 t 0 0 0 127 80 74 1 10 0 0 0 0 0

ATDOF2.4_M0648_1.02_CISBP_shift3 (ATDOF2.4:M0648_1.02:CISBP) 0.826 0.578 2.771 0.883 0.904 92 196 285 246 125 188.800
; 1_m7_assembly_7 versus ATDOF2.4_M0648_1.02_CISBP (ATDOF2.4:M0648_1.02:CISBP); m=11/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 188.8; ---awAAmGt--- ; cor=0.826; Ncor=0.578; logoDP=2.771; NsEucl=0.883; NSW=0.904; rcor=92; rNcor=196; rlogoDP=285; rNsEucl=246; rNSW=125; rank_mean=188.800; match_rank= a 0 0 0 38 42 81 81 66 9 18 0 0 0 c 0 0 0 17 9 7 7 25 7 24 0 0 0 g 0 0 0 23 13 2 0 1 76 21 0 0 0 t 0 0 0 22 36 10 12 8 8 37 0 0 0

DOF5.6_MA0983.1_JASPAR_shift2 (DOF5.6:MA0983.1:JASPAR) 0.810 0.515 4.450 0.884 0.905 118 272 206 235 118 189.800
; 1_m7_assembly_7 versus DOF5.6_MA0983.1_JASPAR (DOF5.6:MA0983.1:JASPAR); m=12/87; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score= 189.8; --vawAAmGt--- ; cor=0.810; Ncor=0.515; logoDP=4.450; NsEucl=0.884; NSW=0.905; rcor=118; rNcor=272; rlogoDP=206; rNsEucl=235; rNSW=118; rank_mean=189.800; match_rank= a 0 0 254 364 432 955 928 613 50 152 0 0 0 c 0 0 257 170 84 35 40 308 28 247 0 0 0 g 0 0 262 227 108 1 1 56 884 213 0 0 0 t 0 0 228 239 376 10 32 24 38 388 0 0 0

DOF2.4_MA0982.1_JASPAR_shift3 (DOF2.4:MA0982.1:JASPAR) 0.824 0.577 2.768 0.882 0.903 96 198 286 247 126 190.600
; 1_m7_assembly_7 versus DOF2.4_MA0982.1_JASPAR (DOF2.4:MA0982.1:JASPAR); m=13/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 190.6; ---awAAmGt--- ; cor=0.824; Ncor=0.577; logoDP=2.768; NsEucl=0.882; NSW=0.903; rcor=96; rNcor=198; rlogoDP=286; rNsEucl=247; rNSW=126; rank_mean=190.600; match_rank= a 0 0 0 381 426 807 815 658 81 177 0 0 0 c 0 0 0 171 90 71 66 252 73 242 0 0 0 g 0 0 0 233 127 18 1 16 762 210 0 0 0 t 0 0 0 215 356 104 118 75 84 371 0 0 0

RIN_EEAD0575_EEADannot_shift0 (RIN:EEAD0575:EEADannot) 0.832 0.448 8.256 0.877 0.894 84 366 74 280 153 191.400
; 1_m7_assembly_7 versus RIN_EEAD0575_EEADannot (RIN:EEAD0575:EEADannot); m=14/87; ncol2=10; w=-3; offset=-3; strand=D; shift=0; score= 191.4; mmyAAAAAGr--- ; cor=0.832; Ncor=0.448; logoDP=8.256; NsEucl=0.877; NSW=0.894; rcor=84; rNcor=366; rlogoDP=74; rNsEucl=280; rNSW=153; rank_mean=191.400; match_rank= a 1 1 0 2 2 2 2 2 0 1 0 0 0 c 1 1 1 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 2 1 0 0 0 t 0 0 1 0 0 0 0 0 0 0 0 0 0

IDD4_MA1371.1_JASPAR_shift0 (IDD4:MA1371.1:JASPAR) 0.780 0.459 7.610 0.893 0.886 175 346 100 138 201 192.000
; 1_m7_assembly_7 versus IDD4_MA1371.1_JASPAR (IDD4:MA1371.1:JASPAR); m=15/87; ncol2=17; w=-3; offset=-3; strand=D; shift=0; score= 192; mAsAAAAmGACAA ; cor=0.780; Ncor=0.459; logoDP=7.610; NsEucl=0.893; NSW=0.886; rcor=175; rNcor=346; rlogoDP=100; rNsEucl=138; rNSW=201; rank_mean=192.000; match_rank= a 213 429 57 430 510 470 529 186 16 580 0 585 581 c 233 5 250 0 0 29 42 301 0 10 591 0 3 g 42 140 242 14 0 78 16 78 575 0 0 6 7 t 103 17 42 147 81 14 4 26 0 1 0 0 0

DOF5.6_M0657_1.02_CISBP_shift2 (DOF5.6:M0657_1.02:CISBP) 0.808 0.514 4.435 0.883 0.904 125 274 207 242 122 194.000
; 1_m7_assembly_7 versus DOF5.6_M0657_1.02_CISBP (DOF5.6:M0657_1.02:CISBP); m=16/87; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score= 194; --vawAAmGy--- ; cor=0.808; Ncor=0.514; logoDP=4.435; NsEucl=0.883; NSW=0.904; rcor=125; rNcor=274; rlogoDP=207; rNsEucl=242; rNSW=122; rank_mean=194.000; match_rank= a 0 0 25 36 43 95 93 61 5 15 0 0 0 c 0 0 26 17 8 4 4 31 3 25 0 0 0 g 0 0 26 23 11 0 0 6 88 21 0 0 0 t 0 0 23 24 38 1 3 2 4 39 0 0 0

CDF2_MA0973.2_JASPAR_shift3 (CDF2:MA0973.2:JASPAR) 0.788 0.552 6.181 0.876 0.892 160 227 142 290 163 196.400
; 1_m7_assembly_7 versus CDF2_MA0973.2_JASPAR (CDF2:MA0973.2:JASPAR); m=17/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 196.4; ---aWAAAGy--- ; cor=0.788; Ncor=0.552; logoDP=6.181; NsEucl=0.876; NSW=0.892; rcor=160; rNcor=227; rlogoDP=142; rNsEucl=290; rNSW=163; rank_mean=196.400; match_rank= a 0 0 0 608 693 980 979 868 17 53 0 0 0 c 0 0 0 92 16 10 10 29 7 295 0 0 0 g 0 0 0 150 41 4 2 81 969 154 0 0 0 t 0 0 0 150 250 5 9 22 6 498 0 0 0

DOF4.2_MA1273.2_JASPAR_shift3 (DOF4.2:MA1273.2:JASPAR) 0.731 0.665 8.092 0.886 0.871 329 84 79 208 299 199.800
; 1_m7_assembly_7 versus DOF4.2_MA1273.2_JASPAR (DOF4.2:MA1273.2:JASPAR); m=18/87; ncol2=11; w=0; offset=0; strand=D; shift=3; score= 199.8; ---AAAAAGGyaa ; cor=0.731; Ncor=0.665; logoDP=8.092; NsEucl=0.886; NSW=0.871; rcor=329; rNcor=84; rlogoDP=79; rNsEucl=208; rNSW=299; rank_mean=199.800; match_rank= a 0 0 0 477 580 598 598 598 0 112 89 346 390 c 0 0 0 38 0 0 0 0 0 0 253 60 38 g 0 0 0 48 0 0 0 0 598 463 28 70 72 t 0 0 0 35 18 0 0 0 0 23 228 122 98

ARF16_MA1688.1_JASPAR_shift3 (ARF16:MA1688.1:JASPAR) 0.746 0.533 5.006 0.895 0.891 277 250 186 128 176 203.400
; 1_m7_assembly_7 versus ARF16_MA1688.1_JASPAR (ARF16:MA1688.1:JASPAR); m=19/87; ncol2=14; w=0; offset=0; strand=D; shift=3; score= 203.4; ---racAAGACAA ; cor=0.746; Ncor=0.533; logoDP=5.006; NsEucl=0.895; NSW=0.891; rcor=277; rNcor=250; rlogoDP=186; rNsEucl=128; rNSW=176; rank_mean=203.400; match_rank= a 0 0 0 2470 3249 980 5651 6555 302 7230 357 7198 6756 c 0 0 0 1473 1643 5307 950 574 374 142 6981 220 261 g 0 0 0 2135 1614 965 578 511 6749 359 283 214 338 t 0 0 0 1754 1326 580 653 192 407 101 211 200 477

IDD7_MA1374.2_JASPAR_shift1 (IDD7:MA1374.2:JASPAR) 0.756 0.540 7.604 0.888 0.875 242 239 102 193 279 211.000
; 1_m7_assembly_7 versus IDD7_MA1374.2_JASPAR (IDD7:MA1374.2:JASPAR); m=20/87; ncol2=14; w=-2; offset=-2; strand=D; shift=1; score= 211; -rsAAAAcGACAA ; cor=0.756; Ncor=0.540; logoDP=7.604; NsEucl=0.888; NSW=0.875; rcor=242; rNcor=239; rlogoDP=102; rNsEucl=193; rNSW=279; rank_mean=211.000; match_rank= a 0 394 95 400 489 424 528 136 2 575 0 574 576 c 0 20 224 3 1 49 31 375 0 9 585 0 2 g 0 153 197 36 0 88 23 57 583 0 0 11 6 t 0 18 69 146 95 24 3 17 0 1 0 0 1

PHYPADRAFT_140773_MA0987.1_JASPAR_shift2 (PHYPADRAFT_140773:MA0987.1:JASPAR) 0.749 0.613 3.823 0.887 0.884 263 141 251 205 208 213.600
; 1_m7_assembly_7 versus PHYPADRAFT_140773_MA0987.1_JASPAR (PHYPADRAFT_140773:MA0987.1:JASPAR); m=21/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 213.6; --srwAAAGydr- ; cor=0.749; Ncor=0.613; logoDP=3.823; NsEucl=0.887; NSW=0.884; rcor=263; rNcor=141; rlogoDP=251; rNsEucl=205; rNSW=208; rank_mean=213.600; match_rank= a 0 0 243 302 396 888 892 715 72 182 271 280 0 c 0 0 266 215 111 43 46 205 22 258 193 218 0 g 0 0 253 260 173 10 1 28 839 229 271 272 0 t 0 0 238 222 321 60 61 52 67 331 265 229 0

IDD11_MA2104.1_JASPAR_shift3 (IDD11:MA2104.1:JASPAR) 0.740 0.617 7.458 0.885 0.867 294 138 110 218 315 215.000
; 1_m7_assembly_7 versus IDD11_MA2104.1_JASPAR (IDD11:MA2104.1:JASPAR); m=22/87; ncol2=12; w=0; offset=0; strand=D; shift=3; score= 215; ---AAaACGACAA ; cor=0.740; Ncor=0.617; logoDP=7.458; NsEucl=0.885; NSW=0.867; rcor=294; rNcor=138; rlogoDP=110; rNsEucl=218; rNSW=315; rank_mean=215.000; match_rank= a 0 0 0 680 846 641 915 209 7 991 0 1000 959 c 0 0 0 12 2 70 39 682 0 9 1000 0 12 g 0 0 0 72 2 142 41 75 990 0 0 0 24 t 0 0 0 236 150 147 5 34 3 0 0 0 5

e_gw1.170.52.1_M0659_1.02_CISBP_shift2 (e_gw1.170.52.1:M0659_1.02:CISBP) 0.748 0.612 3.850 0.887 0.884 267 144 250 206 211 215.600
; 1_m7_assembly_7 versus e_gw1.170.52.1_M0659_1.02_CISBP (e_gw1.170.52.1:M0659_1.02:CISBP); m=23/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 215.6; --srwAAAGydr- ; cor=0.748; Ncor=0.612; logoDP=3.850; NsEucl=0.887; NSW=0.884; rcor=267; rNcor=144; rlogoDP=250; rNsEucl=206; rNSW=211; rank_mean=215.600; match_rank= a 0 0 24 30 40 89 89 72 7 18 27 28 0 c 0 0 27 22 11 4 5 20 2 26 19 22 0 g 0 0 25 26 17 1 0 3 84 23 27 27 0 t 0 0 24 22 32 6 6 5 7 33 27 23 0

At1g14580.ampDAP_M0322_AthalianaCistrome_shift0 (At1g14580.ampDAP:M0322:AthalianaCistrome) 0.763 0.449 6.875 0.892 0.883 219 364 124 153 220 216.000
; 1_m7_assembly_7 versus At1g14580.ampDAP_M0322_AthalianaCistrome (At1g14580.ampDAP:M0322:AthalianaCistrome); m=24/87; ncol2=17; w=-3; offset=-3; strand=D; shift=0; score= 216; mrsWAAAmGACAA ; cor=0.763; Ncor=0.449; logoDP=6.875; NsEucl=0.892; NSW=0.883; rcor=219; rNcor=364; rlogoDP=124; rNsEucl=153; rNSW=220; rank_mean=216.000; match_rank= a 178 383 59 421 466 414 505 173 8 544 0 581 566 c 255 10 248 0 0 41 55 315 0 40 584 0 13 g 41 180 238 11 0 119 20 61 563 0 0 3 4 t 110 11 39 152 118 10 4 35 13 0 0 0 1

IDD2_MA1373.1_JASPAR_shift0 (IDD2:MA1373.1:JASPAR) 0.757 0.504 7.786 0.888 0.874 239 284 87 199 282 218.200
; 1_m7_assembly_7 versus IDD2_MA1373.1_JASPAR (IDD2:MA1373.1:JASPAR); m=25/87; ncol2=15; w=-3; offset=-3; strand=D; shift=0; score= 218.2; hRswAAAMGACAA ; cor=0.757; Ncor=0.504; logoDP=7.786; NsEucl=0.888; NSW=0.874; rcor=239; rNcor=284; rlogoDP=87; rNsEucl=199; rNSW=282; rank_mean=218.200; match_rank= a 28 64 8 57 87 68 91 24 2 94 5 93 83 c 37 4 34 1 0 6 2 67 0 0 89 0 11 g 2 25 33 2 0 17 1 3 92 0 0 1 0 t 27 1 19 34 7 3 0 0 0 0 0 0 0

At5g66730.DAP_M0321_AthalianaCistrome_shift0 (At5g66730.DAP:M0321:AthalianaCistrome) 0.763 0.449 7.749 0.889 0.878 221 365 93 170 247 219.200
; 1_m7_assembly_7 versus At5g66730.DAP_M0321_AthalianaCistrome (At5g66730.DAP:M0321:AthalianaCistrome); m=26/87; ncol2=17; w=-3; offset=-3; strand=D; shift=0; score= 219.2; hasAAAAmGACAA ; cor=0.763; Ncor=0.449; logoDP=7.749; NsEucl=0.889; NSW=0.878; rcor=221; rNcor=365; rlogoDP=93; rNsEucl=170; rNSW=247; rank_mean=219.200; match_rank= a 188 351 133 405 502 403 541 163 4 586 0 578 581 c 186 57 165 10 0 25 23 348 0 0 586 0 0 g 62 121 209 43 0 75 17 59 582 0 0 8 5 t 150 57 79 128 84 83 5 16 0 0 0 0 0

MNB1A_MA0053.1_JASPAR_shift5 (MNB1A:MA0053.1:JASPAR) 0.853 0.426 7.808 0.856 0.896 63 402 85 414 146 222.000
; 1_m7_assembly_7 versus MNB1A_MA0053.1_JASPAR (MNB1A:MA0053.1:JASPAR); m=27/87; ncol2=5; w=0; offset=2; strand=D; shift=5; score= 222; -----AAAGc--- ; cor=0.853; Ncor=0.426; logoDP=7.808; NsEucl=0.856; NSW=0.896; rcor=63; rNcor=402; rlogoDP=85; rNsEucl=414; rNSW=146; rank_mean=222.000; match_rank= a 0 0 0 0 0 15 15 15 0 3 0 0 0 c 0 0 0 0 0 0 0 0 0 9 0 0 0 g 0 0 0 0 0 0 0 0 15 0 0 0 0 t 0 0 0 0 0 0 0 0 0 3 0 0 0

JKD_MA1156.2_JASPAR_rc_shift3 (JKD:MA1156.2:JASPAR_rc) 0.759 0.632 0.181 0.890 0.879 232 118 396 163 237 229.200
; 1_m7_assembly_7 versus JKD_MA1156.2_JASPAR_rc (JKD:MA1156.2:JASPAR_rc); m=28/87; ncol2=12; w=0; offset=0; strand=R; shift=3; score= 229.2; ---AAAAmGACAA ; cor=0.759; Ncor=0.632; logoDP=0.181; NsEucl=0.890; NSW=0.879; rcor=232; rNcor=118; rlogoDP=396; rNsEucl=163; rNSW=237; rank_mean=229.200; match_rank= a 0 0 0 427 509 406 525 172 21 583 0 586 587 c 0 0 0 8 0 34 42 331 0 13 596 0 4 g 0 0 0 27 0 99 20 62 564 0 0 10 5 t 0 0 0 134 87 57 9 31 11 0 0 0 0

DOF5.7_MA0984.2_JASPAR_shift5 (DOF5.7:MA0984.2:JASPAR) 0.878 0.439 4.166 0.862 0.905 43 383 228 378 116 229.600
; 1_m7_assembly_7 versus DOF5.7_MA0984.2_JASPAR (DOF5.7:MA0984.2:JASPAR); m=29/87; ncol2=5; w=0; offset=2; strand=D; shift=5; score= 229.6; -----AAArr--- ; cor=0.878; Ncor=0.439; logoDP=4.166; NsEucl=0.862; NSW=0.905; rcor=43; rNcor=383; rlogoDP=228; rNsEucl=378; rNSW=116; rank_mean=229.600; match_rank= a 0 0 0 0 0 684 970 899 363 485 0 0 0 c 0 0 0 0 0 12 4 3 42 61 0 0 0 g 0 0 0 0 0 61 10 79 589 443 0 0 0 t 0 0 0 0 0 243 16 19 6 11 0 0 0

ADOF2_M0649_1.02_CISBP_shift2 (ADOF2:M0649_1.02:CISBP) 0.801 0.510 2.532 0.876 0.892 138 278 289 291 165 232.200
; 1_m7_assembly_7 versus ADOF2_M0649_1.02_CISBP (ADOF2:M0649_1.02:CISBP); m=30/87; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score= 232.2; --srwAAmGy--- ; cor=0.801; Ncor=0.510; logoDP=2.532; NsEucl=0.876; NSW=0.892; rcor=138; rNcor=278; rlogoDP=289; rNsEucl=291; rNSW=165; rank_mean=232.200; match_rank= a 0 0 24 31 35 81 80 50 11 20 0 0 0 c 0 0 26 20 14 7 9 40 3 25 0 0 0 g 0 0 27 25 17 4 2 2 78 21 0 0 0 t 0 0 23 24 34 8 9 8 8 34 0 0 0

ONAC127_UN0430.2_JASPAR_shift1 (ONAC127:UN0430.2:JASPAR) 0.810 0.405 4.535 0.872 0.901 117 446 202 323 134 244.400
; 1_m7_assembly_7 versus ONAC127_UN0430.2_JASPAR (ONAC127:UN0430.2:JASPAR); m=31/87; ncol2=8; w=-2; offset=-2; strand=D; shift=1; score= 244.4; -AAGAAAAG---- ; cor=0.810; Ncor=0.405; logoDP=4.535; NsEucl=0.872; NSW=0.901; rcor=117; rNcor=446; rlogoDP=202; rNsEucl=323; rNSW=134; rank_mean=244.400; match_rank= a 0 65 67 4 57 61 63 58 3 0 0 0 0 c 0 0 0 0 2 5 0 1 7 0 0 0 0 g 0 0 0 62 7 1 5 3 56 0 0 0 0 t 0 3 1 2 2 1 0 6 2 0 0 0 0

Zm00001d027846_MA1823.1_JASPAR_shift3 (Zm00001d027846:MA1823.1:JASPAR) 0.714 0.595 5.931 0.886 0.870 383 167 157 211 305 244.600
; 1_m7_assembly_7 versus Zm00001d027846_MA1823.1_JASPAR (Zm00001d027846:MA1823.1:JASPAR); m=32/87; ncol2=12; w=0; offset=0; strand=D; shift=3; score= 244.6; ---arAAAGAAAA ; cor=0.714; Ncor=0.595; logoDP=5.931; NsEucl=0.886; NSW=0.870; rcor=383; rNcor=167; rlogoDP=157; rNsEucl=211; rNSW=305; rank_mean=244.600; match_rank= a 0 0 0 430 399 818 893 929 23 896 915 914 752 c 0 0 0 159 157 46 17 6 24 29 11 27 53 g 0 0 0 223 264 86 44 30 866 38 28 33 123 t 0 0 0 175 167 37 33 22 74 24 33 13 59

IDD7_MA1374.1_JASPAR_shift0 (IDD7:MA1374.1:JASPAR) 0.756 0.420 7.604 0.888 0.875 242 414 102 193 279 246.000
; 1_m7_assembly_7 versus IDD7_MA1374.1_JASPAR (IDD7:MA1374.1:JASPAR); m=33/87; ncol2=18; w=-3; offset=-3; strand=D; shift=0; score= 246; mrsAAAAcGACAA ; cor=0.756; Ncor=0.420; logoDP=7.604; NsEucl=0.888; NSW=0.875; rcor=242; rNcor=414; rlogoDP=102; rNsEucl=193; rNSW=279; rank_mean=246.000; match_rank= a 190 394 95 400 489 424 528 136 2 575 0 574 576 c 232 20 224 3 1 49 31 375 0 9 585 0 2 g 44 153 197 36 0 88 23 57 583 0 0 11 6 t 119 18 69 146 95 24 3 17 0 1 0 0 1

ENY_UN0398.2_JASPAR_rc_shift3 (ENY:UN0398.2:JASPAR_rc) 0.755 0.629 0.139 0.888 0.875 250 124 409 185 263 246.200
; 1_m7_assembly_7 versus ENY_UN0398.2_JASPAR_rc (ENY:UN0398.2:JASPAR_rc); m=34/87; ncol2=12; w=0; offset=0; strand=R; shift=3; score= 246.2; ---aAaAmGACAA ; cor=0.755; Ncor=0.629; logoDP=0.139; NsEucl=0.888; NSW=0.875; rcor=250; rNcor=124; rlogoDP=409; rNsEucl=185; rNSW=263; rank_mean=246.200; match_rank= a 0 0 0 637 820 661 911 250 0 993 0 997 988 c 0 0 0 32 3 62 45 627 0 5 1000 0 7 g 0 0 0 92 2 133 40 96 1000 2 0 3 5 t 0 0 0 239 175 145 3 27 0 0 0 0 0

IDD1_MA2396.1_JASPAR_rc_shift3 (IDD1:MA2396.1:JASPAR_rc) 0.755 0.629 0.139 0.888 0.875 248 123 408 187 266 246.400
; 1_m7_assembly_7 versus IDD1_MA2396.1_JASPAR_rc (IDD1:MA2396.1:JASPAR_rc); m=35/87; ncol2=12; w=0; offset=0; strand=R; shift=3; score= 246.4; ---aAaAmGACAA ; cor=0.755; Ncor=0.629; logoDP=0.139; NsEucl=0.888; NSW=0.875; rcor=248; rNcor=123; rlogoDP=408; rNsEucl=187; rNSW=266; rank_mean=246.400; match_rank= a 0 0 0 636 820 660 910 250 0 993 0 996 988 c 0 0 0 31 3 62 45 626 0 5 1000 0 6 g 0 0 0 92 1 132 40 95 1000 1 0 3 5 t 0 0 0 238 174 144 3 26 0 0 0 0 0

e_gw1.149.93.1_M0658_1.02_CISBP_shift2 (e_gw1.149.93.1:M0658_1.02:CISBP) 0.810 0.515 1.719 0.871 0.884 119 273 306 329 210 247.400
; 1_m7_assembly_7 versus e_gw1.149.93.1_M0658_1.02_CISBP (e_gw1.149.93.1:M0658_1.02:CISBP); m=36/87; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score= 247.4; --vrwaAmGy--- ; cor=0.810; Ncor=0.515; logoDP=1.719; NsEucl=0.871; NSW=0.884; rcor=119; rNcor=273; rlogoDP=306; rNsEucl=329; rNSW=210; rank_mean=247.400; match_rank= a 0 0 26 33 40 65 70 57 8 17 0 0 0 c 0 0 26 20 14 13 11 25 8 26 0 0 0 g 0 0 26 25 16 8 5 0 76 23 0 0 0 t 0 0 22 22 30 14 14 18 8 34 0 0 0

IDD5_MA1370.2_JASPAR_rc_shift1 (IDD5:MA1370.2:JASPAR_rc) 0.758 0.541 0.737 0.888 0.876 236 238 334 181 258 249.400
; 1_m7_assembly_7 versus IDD5_MA1370.2_JASPAR_rc (IDD5:MA1370.2:JASPAR_rc); m=37/87; ncol2=14; w=-2; offset=-2; strand=R; shift=1; score= 249.4; -rswAAACGACAA ; cor=0.758; Ncor=0.541; logoDP=0.737; NsEucl=0.888; NSW=0.876; rcor=236; rNcor=238; rlogoDP=334; rNsEucl=181; rNSW=258; rank_mean=249.400; match_rank= a 0 107 15 101 131 122 146 32 0 159 1 157 151 c 0 3 75 0 8 10 8 111 0 0 159 0 7 g 0 44 57 6 4 25 5 14 160 1 0 3 2 t 0 6 13 53 17 3 1 3 0 0 0 0 0

AT1G64620_M0647_1.02_CISBP_shift2 (AT1G64620:M0647_1.02:CISBP) 0.733 0.599 3.125 0.883 0.877 324 162 273 241 252 250.400
; 1_m7_assembly_7 versus AT1G64620_M0647_1.02_CISBP (AT1G64620:M0647_1.02:CISBP); m=38/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 250.4; --vrwAAaGtdr- ; cor=0.733; Ncor=0.599; logoDP=3.125; NsEucl=0.883; NSW=0.877; rcor=324; rNcor=162; rlogoDP=273; rNsEucl=241; rNSW=252; rank_mean=250.400; match_rank= a 0 0 25 32 41 81 83 66 7 17 27 29 0 c 0 0 26 20 10 7 7 23 2 24 19 21 0 g 0 0 26 25 14 4 0 3 85 23 27 27 0 t 0 0 23 23 35 8 10 8 6 36 27 23 0

DOF1.8_MA0981.1_JASPAR_shift2 (DOF1.8:MA0981.1:JASPAR) 0.732 0.599 3.109 0.883 0.877 328 163 274 243 253 252.200
; 1_m7_assembly_7 versus DOF1.8_MA0981.1_JASPAR (DOF1.8:MA0981.1:JASPAR); m=39/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 252.2; --vawAAaGtdr- ; cor=0.732; Ncor=0.599; logoDP=3.109; NsEucl=0.883; NSW=0.877; rcor=328; rNcor=163; rlogoDP=274; rNsEucl=243; rNSW=253; rank_mean=252.200; match_rank= a 0 0 251 321 415 812 831 658 65 170 268 288 0 c 0 0 259 197 100 72 64 233 23 241 189 209 0 g 0 0 256 250 135 38 3 27 846 231 270 269 0 t 0 0 234 233 350 77 102 83 65 359 273 234 0

Dof2_MA0020.2_JASPAR_shift5 (Dof2:MA0020.2:JASPAR) 0.831 0.415 7.765 0.845 0.880 87 422 89 431 232 252.200
; 1_m7_assembly_7 versus Dof2_MA0020.2_JASPAR (Dof2:MA0020.2:JASPAR); m=40/87; ncol2=5; w=0; offset=2; strand=D; shift=5; score= 252.2; -----AAAGc--- ; cor=0.831; Ncor=0.415; logoDP=7.765; NsEucl=0.845; NSW=0.880; rcor=87; rNcor=422; rlogoDP=89; rNsEucl=431; rNSW=232; rank_mean=252.200; match_rank= a 0 0 0 0 0 21 21 21 0 3 0 0 0 c 0 0 0 0 0 0 0 0 0 14 0 0 0 g 0 0 0 0 0 0 0 0 21 2 0 0 0 t 0 0 0 0 0 0 0 0 0 2 0 0 0

IDD5.ampDAP_M0309_AthalianaCistrome_rc_shift0 (IDD5.ampDAP:M0309:AthalianaCistrome_rc) 0.767 0.451 0.182 0.894 0.888 206 358 395 134 191 256.800
; 1_m7_assembly_7 versus IDD5.ampDAP_M0309_AthalianaCistrome_rc (IDD5.ampDAP:M0309:AthalianaCistrome_rc); m=41/87; ncol2=17; w=-3; offset=-3; strand=R; shift=0; score= 256.8; mrsAAAAmGACAA ; cor=0.767; Ncor=0.451; logoDP=0.182; NsEucl=0.894; NSW=0.888; rcor=206; rNcor=358; rlogoDP=395; rNsEucl=134; rNSW=191; rank_mean=256.800; match_rank= a 174 406 64 448 483 438 492 222 53 533 0 597 588 c 255 14 258 4 4 39 60 274 0 66 599 0 5 g 60 164 238 17 0 108 43 55 527 0 0 2 6 t 110 15 39 130 112 14 4 48 19 0 0 0 0

DOF5.7_MA0984.1_JASPAR_shift4 (DOF5.7:MA0984.1:JASPAR) 0.743 0.595 4.206 0.873 0.871 285 169 226 315 300 259.000
; 1_m7_assembly_7 versus DOF5.7_MA0984.1_JASPAR (DOF5.7:MA0984.1:JASPAR); m=42/87; ncol2=8; w=0; offset=1; strand=D; shift=4; score= 259; ----aAAArrgg- ; cor=0.743; Ncor=0.595; logoDP=4.206; NsEucl=0.873; NSW=0.871; rcor=285; rNcor=169; rlogoDP=226; rNsEucl=315; rNSW=300; rank_mean=259.000; match_rank= a 0 0 0 0 448 684 970 899 363 485 102 174 0 c 0 0 0 0 86 12 4 3 42 61 191 215 0 g 0 0 0 0 224 61 10 79 589 443 460 408 0 t 0 0 0 0 241 243 16 19 6 11 247 204 0

DOF5.4_MA1280.2_JASPAR_shift3 (DOF5.4:MA1280.2:JASPAR) 0.760 0.532 7.737 0.860 0.864 229 253 94 392 334 260.400
; 1_m7_assembly_7 versus DOF5.4_MA1280.2_JASPAR (DOF5.4:MA1280.2:JASPAR); m=43/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 260.4; ---AAAAAGk--- ; cor=0.760; Ncor=0.532; logoDP=7.737; NsEucl=0.860; NSW=0.864; rcor=229; rNcor=253; rlogoDP=94; rNsEucl=392; rNSW=334; rank_mean=260.400; match_rank= a 0 0 0 529 456 599 600 600 0 22 0 0 0 c 0 0 0 17 0 0 0 0 0 37 0 0 0 g 0 0 0 34 3 0 0 0 600 209 0 0 0 t 0 0 0 20 141 1 0 0 0 332 0 0 0

WRKY17.ampDAP_M0837_AthalianaCistrome_shift3 (WRKY17.ampDAP:M0837:AthalianaCistrome) 0.719 0.553 8.824 0.877 0.848 359 223 56 281 392 262.200
; 1_m7_assembly_7 versus WRKY17.ampDAP_M0837_AthalianaCistrome (WRKY17.ampDAP:M0837:AthalianaCistrome); m=44/87; ncol2=13; w=0; offset=0; strand=D; shift=3; score= 262.2; ---aaAAAGTCAA ; cor=0.719; Ncor=0.553; logoDP=8.824; NsEucl=0.877; NSW=0.848; rcor=359; rNcor=223; rlogoDP=56; rNsEucl=281; rNSW=392; rank_mean=262.200; match_rank= a 0 0 0 172 246 353 383 386 0 0 0 389 388 c 0 0 0 69 66 3 0 0 0 20 389 0 0 g 0 0 0 62 44 22 1 3 389 0 0 0 0 t 0 0 0 86 33 11 5 0 0 369 0 0 1

IDD5_MA1370.1_JASPAR_rc_shift0 (IDD5:MA1370.1:JASPAR_rc) 0.758 0.474 0.737 0.888 0.876 236 323 334 181 258 266.400
; 1_m7_assembly_7 versus IDD5_MA1370.1_JASPAR_rc (IDD5:MA1370.1:JASPAR_rc); m=45/87; ncol2=16; w=-3; offset=-3; strand=R; shift=0; score= 266.4; crswAAACGACAA ; cor=0.758; Ncor=0.474; logoDP=0.737; NsEucl=0.888; NSW=0.876; rcor=236; rNcor=323; rlogoDP=334; rNsEucl=181; rNSW=258; rank_mean=266.400; match_rank= a 37 107 15 101 131 122 146 32 0 159 1 157 151 c 78 3 75 0 8 10 8 111 0 0 159 0 7 g 14 44 57 6 4 25 5 14 160 1 0 3 2 t 31 6 13 53 17 3 1 3 0 0 0 0 0

TRANSCRIPTION_1qna_B_3D-footprint_rc_shift1 (TRANSCRIPTION:1qna_B:3D-footprint_rc) 0.805 0.403 3.317 0.869 0.897 129 450 268 346 144 267.400
; 1_m7_assembly_7 versus TRANSCRIPTION_1qna_B_3D-footprint_rc (TRANSCRIPTION:1qna_B:3D-footprint_rc); m=46/87; ncol2=8; w=-2; offset=-2; strand=R; shift=1; score= 267.4; -TTTAAaAg---- ; cor=0.805; Ncor=0.403; logoDP=3.317; NsEucl=0.869; NSW=0.897; rcor=129; rNcor=450; rlogoDP=268; rNsEucl=346; rNSW=144; rank_mean=267.400; match_rank= a 0 1 0 10 96 96 64 96 12 0 0 0 0 c 0 10 0 1 0 0 10 0 10 0 0 0 0 g 0 0 0 0 0 0 12 0 64 0 0 0 0 t 0 85 96 85 0 0 10 0 10 0 0 0 0

DOF3.5_MA1276.2_JASPAR_shift3 (DOF3.5:MA1276.2:JASPAR) 0.752 0.526 7.728 0.860 0.863 254 257 95 393 341 268.000
; 1_m7_assembly_7 versus DOF3.5_MA1276.2_JASPAR (DOF3.5:MA1276.2:JASPAR); m=47/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 268; ---AwAAAGk--- ; cor=0.752; Ncor=0.526; logoDP=7.728; NsEucl=0.860; NSW=0.863; rcor=254; rNcor=257; rlogoDP=95; rNsEucl=393; rNSW=341; rank_mean=268.000; match_rank= a 0 0 0 467 348 599 599 599 0 2 0 0 0 c 0 0 0 4 0 0 0 0 0 6 0 0 0 g 0 0 0 103 0 0 0 0 599 219 0 0 0 t 0 0 0 25 251 0 0 0 0 372 0 0 0

NUC_MA1157.2_JASPAR_rc_shift3 (NUC:MA1157.2:JASPAR_rc) 0.743 0.619 0.138 0.885 0.869 286 135 410 213 308 270.400
; 1_m7_assembly_7 versus NUC_MA1157.2_JASPAR_rc (NUC:MA1157.2:JASPAR_rc); m=48/87; ncol2=12; w=0; offset=0; strand=R; shift=3; score= 270.4; ---wAaAcGACAA ; cor=0.743; Ncor=0.619; logoDP=0.138; NsEucl=0.885; NSW=0.869; rcor=286; rNcor=135; rlogoDP=410; rNsEucl=213; rNSW=308; rank_mean=270.400; match_rank= a 0 0 0 366 493 372 515 120 0 565 0 562 557 c 0 0 0 15 3 46 33 381 0 5 570 0 8 g 0 0 0 41 0 89 19 51 570 0 0 8 5 t 0 0 0 148 74 63 3 18 0 0 0 0 0

WRKY28.ampDAP_M0844_AthalianaCistrome_shift4 (WRKY28.ampDAP:M0844:AthalianaCistrome) 0.732 0.549 9.172 0.868 0.844 327 231 38 352 405 270.600
; 1_m7_assembly_7 versus WRKY28.ampDAP_M0844_AthalianaCistrome (WRKY28.ampDAP:M0844:AthalianaCistrome); m=49/87; ncol2=11; w=0; offset=1; strand=D; shift=4; score= 270.6; ----aAAAGTCAA ; cor=0.732; Ncor=0.549; logoDP=9.172; NsEucl=0.868; NSW=0.844; rcor=327; rNcor=231; rlogoDP=38; rNsEucl=352; rNSW=405; rank_mean=270.600; match_rank= a 0 0 0 0 71 120 128 127 0 0 0 123 128 c 0 0 0 0 25 0 0 0 0 14 128 0 0 g 0 0 0 0 16 7 0 1 128 0 0 0 0 t 0 0 0 0 16 1 0 0 0 114 0 5 0

PHYPADRAFT_38837_MA1022.1_JASPAR_shift2 (PHYPADRAFT_38837:MA1022.1:JASPAR) 0.718 0.588 3.269 0.881 0.873 361 184 270 257 290 272.400
; 1_m7_assembly_7 versus PHYPADRAFT_38837_MA1022.1_JASPAR (PHYPADRAFT_38837:MA1022.1:JASPAR); m=50/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 272.4; --vrwAAaGydm- ; cor=0.718; Ncor=0.588; logoDP=3.269; NsEucl=0.881; NSW=0.873; rcor=361; rNcor=184; rlogoDP=270; rNsEucl=257; rNSW=290; rank_mean=272.400; match_rank= a 0 0 251 343 463 828 855 644 61 150 259 283 0 c 0 0 264 186 85 68 62 216 27 269 174 262 0 g 0 0 257 254 129 24 1 54 860 207 307 227 0 t 0 0 228 217 323 81 82 86 52 374 259 227 0

IDD6_MA1160.2_JASPAR_rc_shift0 (IDD6:MA1160.2:JASPAR_rc) 0.755 0.472 0.595 0.888 0.875 245 328 342 186 264 273.000
; 1_m7_assembly_7 versus IDD6_MA1160.2_JASPAR_rc (IDD6:MA1160.2:JASPAR_rc); m=51/87; ncol2=16; w=-3; offset=-3; strand=R; shift=0; score= 273; mRsWAAAcGACAA ; cor=0.755; Ncor=0.472; logoDP=0.595; NsEucl=0.888; NSW=0.875; rcor=245; rNcor=328; rlogoDP=342; rNsEucl=186; rNSW=264; rank_mean=273.000; match_rank= a 72 168 24 171 201 190 217 54 3 225 1 235 240 c 117 4 108 1 6 13 14 154 0 15 240 1 0 g 15 66 89 5 0 32 9 21 237 2 1 6 2 t 38 4 21 65 35 7 2 13 2 0 0 0 0

IDD6_MA2348.1_JASPAR_rc_shift0 (IDD6:MA2348.1:JASPAR_rc) 0.756 0.472 0.598 0.888 0.875 244 327 341 188 270 274.000
; 1_m7_assembly_7 versus IDD6_MA2348.1_JASPAR_rc (IDD6:MA2348.1:JASPAR_rc); m=52/87; ncol2=16; w=-3; offset=-3; strand=R; shift=0; score= 274; mRsWAAAcGACAA ; cor=0.756; Ncor=0.472; logoDP=0.598; NsEucl=0.888; NSW=0.875; rcor=244; rNcor=327; rlogoDP=341; rNsEucl=188; rNSW=270; rank_mean=274.000; match_rank= a 297 694 99 706 830 785 896 223 12 929 4 971 991 c 483 16 446 4 24 53 57 636 0 61 991 4 0 g 61 272 367 20 0 132 37 86 979 8 4 24 8 t 157 16 86 268 144 28 8 53 8 0 0 0 0

IDD11_UN0402.1_JASPAR_shift0 (IDD11:UN0402.1:JASPAR) 0.740 0.411 7.456 0.885 0.867 295 432 111 220 317 275.000
; 1_m7_assembly_7 versus IDD11_UN0402.1_JASPAR (IDD11:UN0402.1:JASPAR); m=53/87; ncol2=18; w=-3; offset=-3; strand=D; shift=0; score= 275; masAAaACGACAA ; cor=0.740; Ncor=0.411; logoDP=7.456; NsEucl=0.885; NSW=0.867; rcor=295; rNcor=432; rlogoDP=111; rNsEucl=220; rNSW=317; rank_mean=275.000; match_rank= a 285.47 621 210 680 846 641 914.53 209 6.838 991 0 1000 959 c 370.94 87.179 332 11.966 1.709 70.085 39.316 682 0 8.547 1000 0 11.966 g 113 209 323 71.795 1.709 141.88 41.026 75.214 990 0 0 0 23.932 t 231 83.761 135 236 150 147 5.128 34.188 3.419 0 0 0 5.128

gw1.385.26.1_M0663_1.02_CISBP_shift2 (gw1.385.26.1:M0663_1.02:CISBP) 0.717 0.587 3.306 0.881 0.873 369 188 269 258 291 275.000
; 1_m7_assembly_7 versus gw1.385.26.1_M0663_1.02_CISBP (gw1.385.26.1:M0663_1.02:CISBP); m=54/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 275; --vrwAAaGydm- ; cor=0.717; Ncor=0.587; logoDP=3.306; NsEucl=0.881; NSW=0.873; rcor=369; rNcor=188; rlogoDP=269; rNsEucl=258; rNSW=291; rank_mean=275.000; match_rank= a 0 0 25 34 46 83 86 64 6 15 26 28 0 c 0 0 26 19 9 7 6 22 3 27 17 26 0 g 0 0 26 25 13 2 0 5 86 21 31 23 0 t 0 0 23 22 32 8 8 9 5 37 26 23 0

PBF_MA0064.1_JASPAR_shift5 (PBF:MA0064.1:JASPAR) 0.815 0.408 7.718 0.839 0.870 108 438 96 441 303 277.200
; 1_m7_assembly_7 versus PBF_MA0064.1_JASPAR (PBF:MA0064.1:JASPAR); m=55/87; ncol2=5; w=0; offset=2; strand=D; shift=5; score= 277.2; -----AAAGy--- ; cor=0.815; Ncor=0.408; logoDP=7.718; NsEucl=0.839; NSW=0.870; rcor=108; rNcor=438; rlogoDP=96; rNsEucl=441; rNSW=303; rank_mean=277.200; match_rank= a 0 0 0 0 0 16 16 16 0 1 0 0 0 c 0 0 0 0 0 0 0 0 0 9 0 0 0 g 0 0 0 0 0 0 0 0 16 1 0 0 0 t 0 0 0 0 0 0 0 0 0 5 0 0 0

fgenesh1_pg.C_Chr_08.0001000114_M0664_1.02_CISBP_shift2 (fgenesh1_pg.C_Chr_08.0001000114:M0664_1.02:CISBP) 0.793 0.505 1.374 0.866 0.874 151 283 322 364 286 281.200
; 1_m7_assembly_7 versus fgenesh1_pg.C_Chr_08.0001000114_M0664_1.02_CISBP (fgenesh1_pg.C_Chr_08.0001000114:M0664_1.02:CISBP); m=56/87; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score= 281.2; --sawaamGt--- ; cor=0.793; Ncor=0.505; logoDP=1.374; NsEucl=0.866; NSW=0.874; rcor=151; rNcor=283; rlogoDP=322; rNsEucl=364; rNSW=286; rank_mean=281.200; match_rank= a 0 0 24 36 41 62 65 55 13 17 0 0 0 c 0 0 26 19 15 13 11 29 10 24 0 0 0 g 0 0 27 23 15 9 7 0 70 21 0 0 0 t 0 0 23 22 29 16 17 16 7 38 0 0 0

AT1G47655.ampDAP_M0271_AthalianaCistrome_rc_shift1 (AT1G47655.ampDAP:M0271:AthalianaCistrome_rc) 0.727 0.485 0.202 0.891 0.882 340 304 392 156 222 282.800
; 1_m7_assembly_7 versus AT1G47655.ampDAP_M0271_AthalianaCistrome_rc (AT1G47655.ampDAP:M0271:AthalianaCistrome_rc); m=57/87; ncol2=15; w=-2; offset=-2; strand=R; shift=1; score= 282.8; -araaAAAGaaAA ; cor=0.727; Ncor=0.485; logoDP=0.202; NsEucl=0.891; NSW=0.882; rcor=340; rNcor=304; rlogoDP=392; rNsEucl=156; rNSW=222; rank_mean=282.800; match_rank= a 0 264 197 352 353 516 559 529 15 210 348 424 443 c 0 72 138 82 61 0 0 0 5 134 79 12 30 g 0 119 183 108 63 51 12 42 551 97 66 120 47 t 0 116 53 29 94 4 0 0 0 130 78 15 51

ARF16_MA1688.2_JASPAR_shift5 (ARF16:MA1688.2:JASPAR) 0.746 0.497 5.004 0.870 0.866 274 291 187 338 327 283.400
; 1_m7_assembly_7 versus ARF16_MA1688.2_JASPAR (ARF16:MA1688.2:JASPAR); m=58/87; ncol2=10; w=0; offset=2; strand=D; shift=5; score= 283.4; -----cAAGACAA ; cor=0.746; Ncor=0.497; logoDP=5.004; NsEucl=0.870; NSW=0.866; rcor=274; rNcor=291; rlogoDP=187; rNsEucl=338; rNSW=327; rank_mean=283.400; match_rank= a 0 0 0 0 0 980 5651 6555 302 7230 357 7198 6756 c 0 0 0 0 0 5307 950 574 374 142 6981 220 261 g 0 0 0 0 0 965 578 511 6749 359 283 214 338 t 0 0 0 0 0 580 653 192 407 101 211 200 477

XP_013599228.1_C2H2_2_AT2G02080_EEAD0669_EEADannot_shift0 (XP_013599228.1_C2H2_2_AT2G02080:EEAD0669:EEADannot) 0.724 0.482 8.918 0.874 0.842 344 307 55 310 414 286.000
; 1_m7_assembly_7 versus XP_013599228.1_C2H2_2_AT2G02080_EEAD0669_EEADannot (XP_013599228.1_C2H2_2_AT2G02080:EEAD0669:EEADannot); m=59/87; ncol2=15; w=-3; offset=-3; strand=D; shift=0; score= 286; mAsAAAACGACAA ; cor=0.724; Ncor=0.482; logoDP=8.918; NsEucl=0.874; NSW=0.842; rcor=344; rNcor=307; rlogoDP=55; rNsEucl=310; rNSW=414; rank_mean=286.000; match_rank= a 30 79 6 79 90 84 100 9 0 100 0 100 100 c 55 2 50 0 0 7 0 84 0 0 100 0 0 g 2 19 39 0 0 9 0 6 100 0 0 0 0 t 13 0 5 21 10 0 0 1 0 0 0 0 0

DOF4.7_M0652_1.02_CISBP_shift1 (DOF4.7:M0652_1.02:CISBP) 0.774 0.452 1.983 0.868 0.879 192 356 298 349 239 286.800
; 1_m7_assembly_7 versus DOF4.7_M0652_1.02_CISBP (DOF4.7:M0652_1.02:CISBP); m=60/87; ncol2=9; w=-2; offset=-2; strand=D; shift=1; score= 286.8; -hrawAAmGt--- ; cor=0.774; Ncor=0.452; logoDP=1.983; NsEucl=0.868; NSW=0.879; rcor=192; rNcor=356; rlogoDP=298; rNsEucl=349; rNSW=239; rank_mean=286.800; match_rank= a 0 26 25 37 37 79 74 46 14 19 0 0 0 c 0 25 23 17 12 6 10 39 4 23 0 0 0 g 0 24 29 22 13 3 4 6 71 18 0 0 0 t 0 25 23 24 38 12 12 9 11 40 0 0 0

ARF4_EEAD0023_EEADannot_rc_shift7 (ARF4:EEAD0023:EEADannot_rc) 0.814 0.407 3.539 0.849 0.886 110 441 259 428 200 287.600
; 1_m7_assembly_7 versus ARF4_EEAD0023_EEADannot_rc (ARF4:EEAD0023:EEADannot_rc); m=61/87; ncol2=5; w=0; offset=4; strand=R; shift=7; score= 287.6; -------mGACA- ; cor=0.814; Ncor=0.407; logoDP=3.539; NsEucl=0.849; NSW=0.886; rcor=110; rNcor=441; rlogoDP=259; rNsEucl=428; rNSW=200; rank_mean=287.600; match_rank= a 0 0 0 0 0 0 0 1840 47 4611 18 4649 0 c 0 0 0 0 0 0 0 2298 19 11 4599 0 0 g 0 0 0 0 0 0 0 360 4556 9 15 0 0 t 0 0 0 0 0 0 0 153 27 19 18 0 0

At5g66730.ampDAP_M0310_AthalianaCistrome_rc_shift0 (At5g66730.ampDAP:M0310:AthalianaCistrome_rc) 0.755 0.444 0.155 0.888 0.876 247 371 403 183 261 293.000
; 1_m7_assembly_7 versus At5g66730.ampDAP_M0310_AthalianaCistrome_rc (At5g66730.ampDAP:M0310:AthalianaCistrome_rc); m=62/87; ncol2=17; w=-3; offset=-3; strand=R; shift=0; score= 293; mavaAaAmGACAA ; cor=0.755; Ncor=0.444; logoDP=0.155; NsEucl=0.888; NSW=0.876; rcor=247; rNcor=371; rlogoDP=403; rNsEucl=183; rNSW=261; rank_mean=293.000; match_rank= a 172 320 157 379 488 393 542 149 0 591 0 593 588 c 210 77 181 19 2 37 27 373 0 3 595 0 4 g 65 142 193 55 1 79 24 57 595 1 0 2 3 t 148 56 64 142 104 86 2 16 0 0 0 0 0

ENY_UN0398.1_JASPAR_rc_shift0 (ENY:UN0398.1:JASPAR_rc) 0.755 0.444 0.155 0.888 0.876 249 372 404 184 262 294.200
; 1_m7_assembly_7 versus ENY_UN0398.1_JASPAR_rc (ENY:UN0398.1:JASPAR_rc); m=63/87; ncol2=17; w=-3; offset=-3; strand=R; shift=0; score= 294.2; mavaAaAmGACAA ; cor=0.755; Ncor=0.444; logoDP=0.155; NsEucl=0.888; NSW=0.876; rcor=249; rNcor=372; rlogoDP=404; rNsEucl=184; rNSW=262; rank_mean=294.200; match_rank= a 289 538 264 637 820 661 911 250.42 0 993 0 997 988 c 353 129 304 31.933 3.361 62.185 45.378 627 0 5.042 1000 0 6.723 g 109 239 324.37 92.437 1.681 133 40.336 95.798 1000 1.681 0 3.361 5.042 t 249 94.118 108 239 174.79 145 3.361 26.891 0 0 0 0 0

Dof2_MA0020.1_JASPAR_shift5 (Dof2:MA0020.1:JASPAR) 0.765 0.459 7.781 0.838 0.842 213 344 88 445 412 300.400
; 1_m7_assembly_7 versus Dof2_MA0020.1_JASPAR (Dof2:MA0020.1:JASPAR); m=64/87; ncol2=6; w=0; offset=2; strand=D; shift=5; score= 300.4; -----AAAGcm-- ; cor=0.765; Ncor=0.459; logoDP=7.781; NsEucl=0.838; NSW=0.842; rcor=213; rNcor=344; rlogoDP=88; rNsEucl=445; rNSW=412; rank_mean=300.400; match_rank= a 0 0 0 0 0 21 21 21 0 3 7 0 0 c 0 0 0 0 0 0 0 0 0 14 6 0 0 g 0 0 0 0 0 0 0 0 21 2 3 0 0 t 0 0 0 0 0 0 0 0 0 2 5 0 0

IDD2.ampDAP_M0320_AthalianaCistrome_rc_shift0 (IDD2.ampDAP:M0320:AthalianaCistrome_rc) 0.750 0.417 0.133 0.889 0.876 261 418 413 179 255 305.200
; 1_m7_assembly_7 versus IDD2.ampDAP_M0320_AthalianaCistrome_rc (IDD2.ampDAP:M0320:AthalianaCistrome_rc); m=65/87; ncol2=18; w=-3; offset=-3; strand=R; shift=0; score= 305.2; masaAaAmGACAA ; cor=0.750; Ncor=0.417; logoDP=0.133; NsEucl=0.889; NSW=0.876; rcor=261; rNcor=418; rlogoDP=413; rNsEucl=179; rNSW=255; rank_mean=305.200; match_rank= a 188 288 142 386 452 339 507 165 11 572 0 578 569 c 183 84 157 12 5 49 30 345 0 6 578 0 8 g 71 144 205 61 0 97 36 53 567 0 0 0 0 t 136 62 74 119 121 93 5 15 0 0 0 0 1

WRKY8.DAP_M0792_AthalianaCistrome_shift2 (WRKY8.DAP:M0792:AthalianaCistrome) 0.704 0.469 8.147 0.875 0.843 430 334 76 303 408 310.200
; 1_m7_assembly_7 versus WRKY8.DAP_M0792_AthalianaCistrome (WRKY8.DAP:M0792:AthalianaCistrome); m=66/87; ncol2=15; w=-1; offset=-1; strand=D; shift=2; score= 310.2; --raaAAAGTCAA ; cor=0.704; Ncor=0.469; logoDP=8.147; NsEucl=0.875; NSW=0.843; rcor=430; rNcor=334; rlogoDP=76; rNsEucl=303; rNSW=408; rank_mean=310.200; match_rank= a 0 0 186 275 363 528 566 575 0 0 0 600 600 c 0 0 104 98 79 8 0 0 0 0 600 0 0 g 0 0 173 108 90 37 7 24 600 0 0 0 0 t 0 0 137 119 68 27 27 1 0 600 0 0 0

WRKY45.ampDAP_M0821_AthalianaCistrome_shift4 (WRKY45.ampDAP:M0821:AthalianaCistrome) 0.709 0.532 8.387 0.862 0.829 409 254 71 381 438 310.600
; 1_m7_assembly_7 versus WRKY45.ampDAP_M0821_AthalianaCistrome (WRKY45.ampDAP:M0821:AthalianaCistrome); m=67/87; ncol2=11; w=0; offset=1; strand=D; shift=4; score= 310.6; ----aAAAGTCAA ; cor=0.709; Ncor=0.532; logoDP=8.387; NsEucl=0.862; NSW=0.829; rcor=409; rNcor=254; rlogoDP=71; rNsEucl=381; rNSW=438; rank_mean=310.600; match_rank= a 0 0 0 0 355 526 545 576 1 0 0 581 581 c 0 0 0 0 97 7 0 0 0 5 583 2 0 g 0 0 0 0 65 29 7 6 582 1 0 0 2 t 0 0 0 0 66 21 31 1 0 577 0 0 0

Zm00001d027846_MA1823.2_JASPAR_shift5 (Zm00001d027846:MA1823.2:JASPAR) 0.714 0.571 5.927 0.859 0.840 379 205 158 397 417 311.200
; 1_m7_assembly_7 versus Zm00001d027846_MA1823.2_JASPAR (Zm00001d027846:MA1823.2:JASPAR); m=68/87; ncol2=8; w=0; offset=2; strand=D; shift=5; score= 311.2; -----AAAGAAAA ; cor=0.714; Ncor=0.571; logoDP=5.927; NsEucl=0.859; NSW=0.840; rcor=379; rNcor=205; rlogoDP=158; rNsEucl=397; rNSW=417; rank_mean=311.200; match_rank= a 0 0 0 0 0 818 893 929 23 896 915 914 752 c 0 0 0 0 0 46 17 6 24 29 11 27 53 g 0 0 0 0 0 86 44 30 866 38 28 33 123 t 0 0 0 0 0 37 33 22 74 24 33 13 59

PHYPADRAFT_153324_MA0989.1_JASPAR_shift2 (PHYPADRAFT_153324:MA0989.1:JASPAR) 0.717 0.522 4.020 0.868 0.860 367 263 236 354 350 314.000
; 1_m7_assembly_7 versus PHYPADRAFT_153324_MA0989.1_JASPAR (PHYPADRAFT_153324:MA0989.1:JASPAR); m=69/87; ncol2=9; w=-1; offset=-1; strand=D; shift=2; score= 314; --vrwAAaGyd-- ; cor=0.717; Ncor=0.522; logoDP=4.020; NsEucl=0.868; NSW=0.860; rcor=367; rNcor=263; rlogoDP=236; rNsEucl=354; rNSW=350; rank_mean=314.000; match_rank= a 0 0 253 334 482 861 926 672 71 139 285 0 0 c 0 0 264 193 71 62 36 147 27 288 158 0 0 g 0 0 261 255 118 13 0 52 898 195 297 0 0 t 0 0 222 218 330 65 38 129 5 378 260 0 0

WRKY45_MA1087.2_JASPAR_shift2 (WRKY45:MA1087.2:JASPAR) 0.702 0.468 7.381 0.876 0.846 440 335 112 289 400 315.200
; 1_m7_assembly_7 versus WRKY45_MA1087.2_JASPAR (WRKY45:MA1087.2:JASPAR); m=70/87; ncol2=15; w=-1; offset=-1; strand=D; shift=2; score= 315.2; --waaAAAGTCAA ; cor=0.702; Ncor=0.468; logoDP=7.381; NsEucl=0.876; NSW=0.846; rcor=440; rNcor=335; rlogoDP=112; rNsEucl=289; rNSW=400; rank_mean=315.200; match_rank= a 0 0 739 878 1345 1914 1960 2087 16 4 12 2160 2155 c 0 0 377 445 339 75 34 16 3 5 2166 16 8 g 0 0 475 339 218 85 51 59 2159 7 6 2 15 t 0 0 603 532 292 120 149 32 16 2178 10 16 16

WRKY45_MA1087.3_JASPAR_shift4 (WRKY45:MA1087.3:JASPAR) 0.700 0.573 7.379 0.862 0.830 452 203 113 376 436 316.000
; 1_m7_assembly_7 versus WRKY45_MA1087.3_JASPAR (WRKY45:MA1087.3:JASPAR); m=71/87; ncol2=10; w=0; offset=1; strand=D; shift=4; score= 316; ----aAAAGTCAA ; cor=0.700; Ncor=0.573; logoDP=7.379; NsEucl=0.862; NSW=0.830; rcor=452; rNcor=203; rlogoDP=113; rNsEucl=376; rNSW=436; rank_mean=316.000; match_rank= a 0 0 0 0 1345 1914 1960 2087 16 4 12 2160 2155 c 0 0 0 0 339 75 34 16 3 5 2166 16 8 g 0 0 0 0 218 85 51 59 2159 7 6 2 15 t 0 0 0 0 292 120 149 32 16 2178 10 16 16

e_gw1.392.16.1_M0660_1.02_CISBP_shift2 (e_gw1.392.16.1:M0660_1.02:CISBP) 0.714 0.519 4.005 0.867 0.859 381 265 238 356 358 319.600
; 1_m7_assembly_7 versus e_gw1.392.16.1_M0660_1.02_CISBP (e_gw1.392.16.1:M0660_1.02:CISBP); m=72/87; ncol2=9; w=-1; offset=-1; strand=D; shift=2; score= 319.6; --vrwAAaGyd-- ; cor=0.714; Ncor=0.519; logoDP=4.005; NsEucl=0.867; NSW=0.859; rcor=381; rNcor=265; rlogoDP=238; rNsEucl=356; rNSW=358; rank_mean=319.600; match_rank= a 0 0 25 33 48 86 92 67 7 13 28 0 0 c 0 0 26 19 7 6 4 15 3 29 16 0 0 g 0 0 27 26 12 2 0 5 90 20 30 0 0 t 0 0 22 22 33 6 4 13 0 38 26 0 0

WRKY7_MA1313.2_JASPAR_rc_shift4 (WRKY7:MA1313.2:JASPAR_rc) 0.710 0.532 5.701 0.861 0.827 404 251 168 386 440 329.800
; 1_m7_assembly_7 versus WRKY7_MA1313.2_JASPAR_rc (WRKY7:MA1313.2:JASPAR_rc); m=73/87; ncol2=11; w=0; offset=1; strand=R; shift=4; score= 329.8; ----aAAAGTCAA ; cor=0.710; Ncor=0.532; logoDP=5.701; NsEucl=0.861; NSW=0.827; rcor=404; rNcor=251; rlogoDP=168; rNsEucl=386; rNSW=440; rank_mean=329.800; match_rank= a 0 0 0 0 382 539 579 578 1 0 1 594 594 c 0 0 0 0 81 4 0 0 0 7 593 0 0 g 0 0 0 0 70 25 3 13 593 0 0 0 0 t 0 0 0 0 61 26 12 3 0 587 0 0 0

AtIDD11.ampDAP_M0316_AthalianaCistrome_rc_shift0 (AtIDD11.ampDAP:M0316:AthalianaCistrome_rc) 0.740 0.411 0.145 0.885 0.867 296 433 405 221 318 334.600
; 1_m7_assembly_7 versus AtIDD11.ampDAP_M0316_AthalianaCistrome_rc (AtIDD11.ampDAP:M0316:AthalianaCistrome_rc); m=74/87; ncol2=18; w=-3; offset=-3; strand=R; shift=0; score= 334.6; masAAaACGACAA ; cor=0.740; Ncor=0.411; logoDP=0.145; NsEucl=0.885; NSW=0.867; rcor=296; rNcor=433; rlogoDP=405; rNsEucl=221; rNSW=318; rank_mean=334.600; match_rank= a 167 363 123 398 495 375 535 122 4 580 0 585 561 c 217 51 194 7 1 41 23 399 0 5 585 0 7 g 66 122 189 42 1 83 24 44 579 0 0 0 14 t 135 49 79 138 88 86 3 20 2 0 0 0 3

MGP.ampDAP_M0314_AthalianaCistrome_rc_shift0 (MGP.ampDAP:M0314:AthalianaCistrome_rc) 0.740 0.411 0.130 0.884 0.865 292 430 414 229 329 338.800
; 1_m7_assembly_7 versus MGP.ampDAP_M0314_AthalianaCistrome_rc (MGP.ampDAP:M0314:AthalianaCistrome_rc); m=75/87; ncol2=18; w=-3; offset=-3; strand=R; shift=0; score= 338.8; maswAaACGACAA ; cor=0.740; Ncor=0.411; logoDP=0.130; NsEucl=0.884; NSW=0.865; rcor=292; rNcor=430; rlogoDP=414; rNsEucl=229; rNSW=329; rank_mean=338.800; match_rank= a 176 360 130 379 512 389 549 124 2 592 0 592 587 c 234 63 195 12 0 35 22 410 0 0 592 0 3 g 49 136 198 52 0 77 19 46 590 0 0 0 2 t 133 33 69 149 80 91 2 12 0 0 0 0 0

Dof3_MA0021.1_JASPAR_shift5 (Dof3:MA0021.1:JASPAR) 0.730 0.438 7.809 0.826 0.819 334 388 84 452 449 341.400
; 1_m7_assembly_7 versus Dof3_MA0021.1_JASPAR (Dof3:MA0021.1:JASPAR); m=76/87; ncol2=6; w=0; offset=2; strand=D; shift=5; score= 341.4; -----AAAGyv-- ; cor=0.730; Ncor=0.438; logoDP=7.809; NsEucl=0.826; NSW=0.819; rcor=334; rNcor=388; rlogoDP=84; rNsEucl=452; rNSW=449; rank_mean=341.400; match_rank= a 0 0 0 0 0 21 21 21 0 0 6 0 0 c 0 0 0 0 0 0 0 0 0 10 6 0 0 g 0 0 0 0 0 0 0 0 21 3 9 0 0 t 0 0 0 0 0 0 0 0 0 8 0 0 0

WRKY27_MA1318.2_JASPAR_rc_shift4 (WRKY27:MA1318.2:JASPAR_rc) 0.700 0.525 5.752 0.861 0.826 453 258 165 389 444 341.800
; 1_m7_assembly_7 versus WRKY27_MA1318.2_JASPAR_rc (WRKY27:MA1318.2:JASPAR_rc); m=77/87; ncol2=11; w=0; offset=1; strand=R; shift=4; score= 341.8; ----aAAAGTCAA ; cor=0.700; Ncor=0.525; logoDP=5.752; NsEucl=0.861; NSW=0.826; rcor=453; rNcor=258; rlogoDP=165; rNsEucl=389; rNSW=444; rank_mean=341.800; match_rank= a 0 0 0 0 377 521 542 574 0 2 0 600 600 c 0 0 0 0 89 2 2 0 0 3 600 0 0 g 0 0 0 0 64 34 10 20 600 0 0 0 0 t 0 0 0 0 70 43 46 6 0 595 0 0 0

WRKY50_MA1317.1_JASPAR_rc_shift2 (WRKY50:MA1317.1:JASPAR_rc) 0.700 0.539 2.003 0.874 0.840 451 240 297 314 418 344.000
; 1_m7_assembly_7 versus WRKY50_MA1317.1_JASPAR_rc (WRKY50:MA1317.1:JASPAR_rc); m=78/87; ncol2=13; w=-1; offset=-1; strand=R; shift=2; score= 344; --waAAAAGTCAA ; cor=0.700; Ncor=0.539; logoDP=2.003; NsEucl=0.874; NSW=0.840; rcor=451; rNcor=240; rlogoDP=297; rNsEucl=314; rNSW=418; rank_mean=344.000; match_rank= a 0 0 215 274 406 502 511 543 0 0 0 565 559 c 0 0 87 90 48 14 4 1 0 1 568 0 2 g 0 0 124 88 63 23 10 22 568 0 0 0 1 t 0 0 142 116 51 29 43 2 0 567 0 3 6

WRKY45.DAP_M0805_AthalianaCistrome_rc_shift3 (WRKY45.DAP:M0805:AthalianaCistrome_rc) 0.705 0.587 0.119 0.874 0.842 428 186 417 308 413 350.400
; 1_m7_assembly_7 versus WRKY45.DAP_M0805_AthalianaCistrome_rc (WRKY45.DAP:M0805:AthalianaCistrome_rc); m=79/87; ncol2=12; w=0; offset=0; strand=R; shift=3; score= 350.4; ---aaAAAGTCAA ; cor=0.705; Ncor=0.587; logoDP=0.119; NsEucl=0.874; NSW=0.842; rcor=428; rNcor=186; rlogoDP=417; rNsEucl=308; rNSW=413; rank_mean=350.400; match_rank= a 0 0 0 272 391 533 558 583 0 0 0 600 597 c 0 0 0 130 82 15 8 0 0 1 599 0 0 g 0 0 0 92 69 25 8 16 600 0 1 0 2 t 0 0 0 106 58 27 26 1 0 599 0 0 1

WRKY7_MA1313.1_JASPAR_rc_shift3 (WRKY7:MA1313.1:JASPAR_rc) 0.712 0.508 0.178 0.875 0.844 398 281 397 298 403 355.400
; 1_m7_assembly_7 versus WRKY7_MA1313.1_JASPAR_rc (WRKY7:MA1313.1:JASPAR_rc); m=80/87; ncol2=14; w=0; offset=0; strand=R; shift=3; score= 355.4; ---aaAAAGTCAA ; cor=0.712; Ncor=0.508; logoDP=0.178; NsEucl=0.875; NSW=0.844; rcor=398; rNcor=281; rlogoDP=397; rNsEucl=298; rNSW=403; rank_mean=355.400; match_rank= a 0 0 0 269 382 539 579 578 1 0 1 594 594 c 0 0 0 118 81 4 0 0 0 7 593 0 0 g 0 0 0 78 70 25 3 13 593 0 0 0 0 t 0 0 0 129 61 26 12 3 0 587 0 0 0

NUC.ampDAP_M0330_AthalianaCistrome_rc_shift0 (NUC.ampDAP:M0330:AthalianaCistrome_rc) 0.723 0.425 0.136 0.879 0.854 345 406 412 265 373 360.200
; 1_m7_assembly_7 versus NUC.ampDAP_M0330_AthalianaCistrome_rc (NUC.ampDAP:M0330:AthalianaCistrome_rc); m=81/87; ncol2=17; w=-3; offset=-3; strand=R; shift=0; score= 360.2; mrswAAACGACAA ; cor=0.723; Ncor=0.425; logoDP=0.136; NsEucl=0.879; NSW=0.854; rcor=345; rNcor=406; rlogoDP=412; rNsEucl=265; rNSW=373; rank_mean=360.200; match_rank= a 100 228 61 217 307 235 319 49 1 345 0 345 334 c 149 19 124 5 0 23 19 272 0 0 345 0 11 g 21 87 116 21 0 72 7 16 344 0 0 0 0 t 75 11 44 102 38 15 0 8 0 0 0 0 0

NLP7_MA1794.2_JASPAR_rc_shift4 (NLP7:MA1794.2:JASPAR_rc) 0.702 0.561 0.343 0.861 0.846 443 216 360 387 401 361.400
; 1_m7_assembly_7 versus NLP7_MA1794.2_JASPAR_rc (NLP7:MA1794.2:JASPAR_rc); m=82/87; ncol2=8; w=0; offset=1; strand=R; shift=4; score= 361.4; ----AArrGyCA- ; cor=0.702; Ncor=0.561; logoDP=0.343; NsEucl=0.861; NSW=0.846; rcor=443; rNcor=216; rlogoDP=360; rNsEucl=387; rNSW=401; rank_mean=361.400; match_rank= a 0 0 0 0 946 909 570 516 0 156 0 807 0 c 0 0 0 0 0 0 22 40 0 339 934 2 0 g 0 0 0 0 15 81 390 444 1000 175 0 182 0 t 0 0 0 0 39 10 18 0 0 329 66 10 0

WRKY8.ampDAP_M0820_AthalianaCistrome_rc_shift3 (WRKY8.ampDAP:M0820:AthalianaCistrome_rc) 0.714 0.476 0.130 0.873 0.838 385 318 415 316 423 371.400
; 1_m7_assembly_7 versus WRKY8.ampDAP_M0820_AthalianaCistrome_rc (WRKY8.ampDAP:M0820:AthalianaCistrome_rc); m=83/87; ncol2=15; w=0; offset=0; strand=R; shift=3; score= 371.4; ---aAAAAGTCAA ; cor=0.714; Ncor=0.476; logoDP=0.130; NsEucl=0.873; NSW=0.838; rcor=385; rNcor=318; rlogoDP=415; rNsEucl=316; rNSW=423; rank_mean=371.400; match_rank= a 0 0 0 316 451 579 589 595 0 0 0 599 599 c 0 0 0 81 46 1 0 0 0 1 599 0 0 g 0 0 0 90 55 6 1 4 599 0 0 0 0 t 0 0 0 112 47 13 9 0 0 598 0 0 0

TAGL1_UN0426.2_JASPAR_shift1 (TAGL1:UN0426.2:JASPAR) 0.705 0.411 5.834 0.843 0.828 425 431 160 436 439 378.200
; 1_m7_assembly_7 versus TAGL1_UN0426.2_JASPAR (TAGL1:UN0426.2:JASPAR); m=84/87; ncol2=9; w=-2; offset=-2; strand=D; shift=1; score= 378.2; -agAAAAAGG--- ; cor=0.705; Ncor=0.411; logoDP=5.834; NsEucl=0.843; NSW=0.828; rcor=425; rNcor=431; rlogoDP=160; rNsEucl=436; rNSW=439; rank_mean=378.200; match_rank= a 0 2930 1091 4576 4641 4647 4590 4562 320 461 0 0 0 c 0 676 351 61 47 23 14 37 46 83 0 0 0 g 0 401 2722 106 85 83 109 85 4328 4129 0 0 0 t 0 844 687 108 78 98 138 167 157 178 0 0 0

gw1.12.257.1_M0662_1.02_CISBP_shift3 (gw1.12.257.1:M0662_1.02:CISBP) 0.717 0.502 0.478 0.841 0.824 371 287 352 438 446 378.800
; 1_m7_assembly_7 versus gw1.12.257.1_M0662_1.02_CISBP (gw1.12.257.1:M0662_1.02:CISBP); m=85/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 378.8; ---vwaamgy--- ; cor=0.717; Ncor=0.502; logoDP=0.478; NsEucl=0.841; NSW=0.824; rcor=371; rNcor=287; rlogoDP=352; rNsEucl=438; rNSW=446; rank_mean=378.800; match_rank= a 0 0 0 25 26 51 52 35 20 21 0 0 0 c 0 0 0 26 21 18 19 39 13 25 0 0 0 g 0 0 0 26 21 15 11 5 54 23 0 0 0 t 0 0 0 23 32 16 18 21 13 31 0 0 0

LOC_Os08g44050.1_C2H2_2_AT2G02080_EEAD0634_EEADannot_rc_shift0 (LOC_Os08g44050.1_C2H2_2_AT2G02080:EEAD0634:EEADannot_rc) 0.709 0.472 0.138 0.871 0.835 412 326 411 330 431 382.000
; 1_m7_assembly_7 versus LOC_Os08g44050.1_C2H2_2_AT2G02080_EEAD0634_EEADannot_rc (LOC_Os08g44050.1_C2H2_2_AT2G02080:EEAD0634:EEADannot_rc); m=86/87; ncol2=15; w=-3; offset=-3; strand=R; shift=0; score= 382; mAsWAAACGACAA ; cor=0.709; Ncor=0.472; logoDP=0.138; NsEucl=0.871; NSW=0.835; rcor=412; rNcor=326; rlogoDP=411; rNsEucl=330; rNSW=431; rank_mean=382.000; match_rank= a 29 71 5 72 94 78 99 6 0 100 0 100 100 c 50 5 52 0 0 9 1 88 0 0 100 0 0 g 4 24 37 1 0 10 0 5 100 0 0 0 0 t 17 0 6 27 6 3 0 1 0 0 0 0 0

WRKY27_MA1318.1_JASPAR_rc_shift4 (WRKY27:MA1318.1:JASPAR_rc) 0.700 0.450 0.213 0.861 0.826 453 361 390 389 444 407.400
; 1_m7_assembly_7 versus WRKY27_MA1318.1_JASPAR_rc (WRKY27:MA1318.1:JASPAR_rc); m=87/87; ncol2=13; w=0; offset=1; strand=R; shift=4; score= 407.4; ----aAAAGTCAA ; cor=0.700; Ncor=0.450; logoDP=0.213; NsEucl=0.861; NSW=0.826; rcor=453; rNcor=361; rlogoDP=390; rNsEucl=389; rNSW=444; rank_mean=407.400; match_rank= a 0 0 0 0 377 521 542 574 0 2 0 600 600 c 0 0 0 0 89 2 2 0 0 3 600 0 0 g 0 0 0 0 64 34 10 20 600 0 0 0 0 t 0 0 0 0 70 43 46 6 0 595 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	match_rank	Aligned matrices
1_m7_assembly_7_shift3 (assembly_7)													; 1_m7_assembly_7 (assembly_7); m=0 (reference); ncol1=10; shift=3; ncol=13; ---wmAAAGACww ; Alignment reference a 0 0 0 97 101 248 248 248 0 248 0 96 96 c 0 0 0 42 63 0 0 0 0 0 248 45 33 g 0 0 0 34 35 0 0 0 248 0 0 28 44 t 0 0 0 75 49 0 0 0 0 0 0 79 75
SGR5_MA1159.2_JASPAR_shift2 (SGR5:MA1159.2:JASPAR)	0.825	0.635	7.687	0.907	0.913	94	112	97	59	83	89.000	50	; 1_m7_assembly_7 versus SGR5_MA1159.2_JASPAR (SGR5:MA1159.2:JASPAR); m=1/87; ncol2=13; w=-1; offset=-1; strand=D; shift=2; score= 89; --raAwAAGACAA ; cor=0.825; Ncor=0.635; logoDP=7.687; NsEucl=0.907; NSW=0.913; rcor=94; rNcor=112; rlogoDP=97; rNsEucl=59; rNSW=83; rank_mean=89.000; match_rank=50 a 0 0 343 340 433 310 486 532 33 591 0 592 598 c 0 0 57 48 0 16 22 4 0 6 599 1 1 g 0 0 160 116 44 27 92 22 566 0 1 7 0 t 0 0 40 96 123 247 0 42 1 3 0 0 1
SGR5_MA1159.1_JASPAR_shift1 (SGR5:MA1159.1:JASPAR)	0.825	0.550	7.687	0.907	0.913	94	230	97	59	83	112.600		; 1_m7_assembly_7 versus SGR5_MA1159.1_JASPAR (SGR5:MA1159.1:JASPAR); m=2/87; ncol2=15; w=-2; offset=-2; strand=D; shift=1; score= 112.6; -araAwAAGACAA ; cor=0.825; Ncor=0.550; logoDP=7.687; NsEucl=0.907; NSW=0.913; rcor=94; rNcor=230; rlogoDP=97; rNsEucl=59; rNSW=83; rank_mean=112.600; match_rank= a 0 293 343 340 433 310 486 532 33 591 0 592 598 c 0 126 57 48 0 16 22 4 0 6 599 1 1 g 0 40 160 116 44 27 92 22 566 0 1 7 0 t 0 141 40 96 123 247 0 42 1 3 0 0 1
DOF5.3_MA1071.1_JASPAR_shift2 (DOF5.3:MA1071.1:JASPAR)	0.950	0.518	3.023	0.920	0.962	3	266	275	24	9	115.400		; 1_m7_assembly_7 versus DOF5.3_MA1071.1_JASPAR (DOF5.3:MA1071.1:JASPAR); m=3/87; ncol2=7; w=-1; offset=-1; strand=D; shift=2; score= 115.4; --gawAAmG---- ; cor=0.950; Ncor=0.518; logoDP=3.023; NsEucl=0.920; NSW=0.962; rcor=3; rNcor=266; rlogoDP=275; rNsEucl=24; rNSW=9; rank_mean=115.400; match_rank= a 0 0 247 327 396 842 850 611 66 0 0 0 0 c 0 0 247 213 128 61 79 329 52 0 0 0 0 g 0 0 262 228 146 17 0 14 767 0 0 0 0 t 0 0 244 233 331 81 70 47 116 0 0 0 0
TMO6_M0654_1.02_CISBP_shift2 (TMO6:M0654_1.02:CISBP)	0.950	0.518	2.998	0.920	0.961	4	268	278	25	11	117.200		; 1_m7_assembly_7 versus TMO6_M0654_1.02_CISBP (TMO6:M0654_1.02:CISBP); m=4/87; ncol2=7; w=-1; offset=-1; strand=D; shift=2; score= 117.2; --vawAAmG---- ; cor=0.950; Ncor=0.518; logoDP=2.998; NsEucl=0.920; NSW=0.961; rcor=4; rNcor=268; rlogoDP=278; rNsEucl=25; rNSW=11; rank_mean=117.200; match_rank= a 0 0 25 33 40 84 85 61 7 0 0 0 0 c 0 0 25 21 13 6 8 33 5 0 0 0 0 g 0 0 26 23 14 2 0 1 76 0 0 0 0 t 0 0 24 23 33 8 7 5 12 0 0 0 0
DOF2.2_MA1272.3_JASPAR_shift3 (DOF2.2:MA1272.3:JASPAR)	0.887	0.532	7.752	0.884	0.919	35	252	92	230	68	135.400		; 1_m7_assembly_7 versus DOF2.2_MA1272.3_JASPAR (DOF2.2:MA1272.3:JASPAR); m=5/87; ncol2=6; w=0; offset=0; strand=D; shift=3; score= 135.4; ---AAAAAG---- ; cor=0.887; Ncor=0.532; logoDP=7.752; NsEucl=0.884; NSW=0.919; rcor=35; rNcor=252; rlogoDP=92; rNsEucl=230; rNSW=68; rank_mean=135.400; match_rank= a 0 0 0 1086 1077 1086 1084 1086 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 1086 0 0 0 0 t 0 0 0 0 9 0 2 0 0 0 0 0 0
SGR5.ampDAP_M0303_AthalianaCistrome_rc_shift0 (SGR5.ampDAP:M0303:AthalianaCistrome_rc)	0.818	0.546	0.365	0.907	0.913	103	234	358	61	85	168.200		; 1_m7_assembly_7 versus SGR5.ampDAP_M0303_AthalianaCistrome_rc (SGR5.ampDAP:M0303:AthalianaCistrome_rc); m=6/87; ncol2=15; w=-3; offset=-3; strand=R; shift=0; score= 168.2; aaraawrAGACAA ; cor=0.818; Ncor=0.546; logoDP=0.365; NsEucl=0.907; NSW=0.913; rcor=103; rNcor=234; rlogoDP=358; rNsEucl=61; rNSW=85; rank_mean=168.200; match_rank= a 201 274 297 317 405 309 406 516 30 597 0 595 582 c 137 119 81 69 5 44 34 0 0 1 598 0 2 g 112 88 161 126 45 59 158 39 568 0 0 3 14 t 148 117 59 86 143 186 0 43 0 0 0 0 0
ARF34_EEAD0036_EEADannot_shift7 (ARF34:EEAD0036:EEADannot)	0.886	0.443	6.221	0.880	0.928	36	374	140	260	52	172.400		; 1_m7_assembly_7 versus ARF34_EEAD0036_EEADannot (ARF34:EEAD0036:EEADannot); m=7/87; ncol2=5; w=0; offset=4; strand=D; shift=7; score= 172.4; -------aGACA- ; cor=0.886; Ncor=0.443; logoDP=6.221; NsEucl=0.880; NSW=0.928; rcor=36; rNcor=374; rlogoDP=140; rNsEucl=260; rNSW=52; rank_mean=172.400; match_rank= a 0 0 0 0 0 0 0 2916 0 4525 0 4525 0 c 0 0 0 0 0 0 0 1126 0 0 4525 0 0 g 0 0 0 0 0 0 0 328 4525 0 0 0 0 t 0 0 0 0 0 0 0 156 0 0 0 0 0
IDD4_MA1371.2_JASPAR_shift1 (IDD4:MA1371.2:JASPAR)	0.780	0.520	7.610	0.893	0.886	175	264	100	138	201	175.600		; 1_m7_assembly_7 versus IDD4_MA1371.2_JASPAR (IDD4:MA1371.2:JASPAR); m=8/87; ncol2=15; w=-2; offset=-2; strand=D; shift=1; score= 175.6; -AsAAAAmGACAA ; cor=0.780; Ncor=0.520; logoDP=7.610; NsEucl=0.893; NSW=0.886; rcor=175; rNcor=264; rlogoDP=100; rNsEucl=138; rNSW=201; rank_mean=175.600; match_rank= a 0 429 57 430 510 470 529 186 16 580 0 585 581 c 0 5 250 0 0 29 42 301 0 10 591 0 3 g 0 140 242 14 0 78 16 78 575 0 0 6 7 t 0 17 42 147 81 14 4 26 0 1 0 0 0
DOF5.7_DOF5.7_ArabidopsisPBM_shift3 (DOF5.7:DOF5.7:ArabidopsisPBM)	0.733	0.733	4.194	0.896	0.891	323	42	227	126	172	178.000		; 1_m7_assembly_7 versus DOF5.7_DOF5.7_ArabidopsisPBM (DOF5.7:DOF5.7:ArabidopsisPBM); m=9/87; ncol2=10; w=0; offset=0; strand=D; shift=3; score= 178; ---raAAArrkgr ; cor=0.733; Ncor=0.733; logoDP=4.194; NsEucl=0.896; NSW=0.891; rcor=323; rNcor=42; rlogoDP=227; rNsEucl=126; rNSW=172; rank_mean=178.000; match_rank= a 0 0 0 39 45 68 97 90 36 48 10 17 29 c 0 0 0 21 9 2 0 0 4 7 19 21 22 g 0 0 0 27 22 6 1 8 59 44 46 41 31 t 0 0 0 13 24 24 2 2 1 1 25 21 18
MGP_MA1158.2_JASPAR_shift3 (MGP:MA1158.2:JASPAR)	0.761	0.585	7.908	0.889	0.876	226	190	82	180	256	186.800		; 1_m7_assembly_7 versus MGP_MA1158.2_JASPAR (MGP:MA1158.2:JASPAR); m=10/87; ncol2=13; w=0; offset=0; strand=D; shift=3; score= 186.8; ---aAAAmGACAA ; cor=0.761; Ncor=0.585; logoDP=7.908; NsEucl=0.889; NSW=0.876; rcor=226; rNcor=190; rlogoDP=82; rNsEucl=180; rNSW=256; rank_mean=186.800; match_rank= a 0 0 0 402 512 421 552 153 0 593 0 578 587 c 0 0 0 15 0 26 21 379 0 0 594 0 3 g 0 0 0 50 2 73 20 52 594 1 0 16 4 t 0 0 0 127 80 74 1 10 0 0 0 0 0
ATDOF2.4_M0648_1.02_CISBP_shift3 (ATDOF2.4:M0648_1.02:CISBP)	0.826	0.578	2.771	0.883	0.904	92	196	285	246	125	188.800		; 1_m7_assembly_7 versus ATDOF2.4_M0648_1.02_CISBP (ATDOF2.4:M0648_1.02:CISBP); m=11/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 188.8; ---awAAmGt--- ; cor=0.826; Ncor=0.578; logoDP=2.771; NsEucl=0.883; NSW=0.904; rcor=92; rNcor=196; rlogoDP=285; rNsEucl=246; rNSW=125; rank_mean=188.800; match_rank= a 0 0 0 38 42 81 81 66 9 18 0 0 0 c 0 0 0 17 9 7 7 25 7 24 0 0 0 g 0 0 0 23 13 2 0 1 76 21 0 0 0 t 0 0 0 22 36 10 12 8 8 37 0 0 0
DOF5.6_MA0983.1_JASPAR_shift2 (DOF5.6:MA0983.1:JASPAR)	0.810	0.515	4.450	0.884	0.905	118	272	206	235	118	189.800		; 1_m7_assembly_7 versus DOF5.6_MA0983.1_JASPAR (DOF5.6:MA0983.1:JASPAR); m=12/87; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score= 189.8; --vawAAmGt--- ; cor=0.810; Ncor=0.515; logoDP=4.450; NsEucl=0.884; NSW=0.905; rcor=118; rNcor=272; rlogoDP=206; rNsEucl=235; rNSW=118; rank_mean=189.800; match_rank= a 0 0 254 364 432 955 928 613 50 152 0 0 0 c 0 0 257 170 84 35 40 308 28 247 0 0 0 g 0 0 262 227 108 1 1 56 884 213 0 0 0 t 0 0 228 239 376 10 32 24 38 388 0 0 0
DOF2.4_MA0982.1_JASPAR_shift3 (DOF2.4:MA0982.1:JASPAR)	0.824	0.577	2.768	0.882	0.903	96	198	286	247	126	190.600		; 1_m7_assembly_7 versus DOF2.4_MA0982.1_JASPAR (DOF2.4:MA0982.1:JASPAR); m=13/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 190.6; ---awAAmGt--- ; cor=0.824; Ncor=0.577; logoDP=2.768; NsEucl=0.882; NSW=0.903; rcor=96; rNcor=198; rlogoDP=286; rNsEucl=247; rNSW=126; rank_mean=190.600; match_rank= a 0 0 0 381 426 807 815 658 81 177 0 0 0 c 0 0 0 171 90 71 66 252 73 242 0 0 0 g 0 0 0 233 127 18 1 16 762 210 0 0 0 t 0 0 0 215 356 104 118 75 84 371 0 0 0
RIN_EEAD0575_EEADannot_shift0 (RIN:EEAD0575:EEADannot)	0.832	0.448	8.256	0.877	0.894	84	366	74	280	153	191.400		; 1_m7_assembly_7 versus RIN_EEAD0575_EEADannot (RIN:EEAD0575:EEADannot); m=14/87; ncol2=10; w=-3; offset=-3; strand=D; shift=0; score= 191.4; mmyAAAAAGr--- ; cor=0.832; Ncor=0.448; logoDP=8.256; NsEucl=0.877; NSW=0.894; rcor=84; rNcor=366; rlogoDP=74; rNsEucl=280; rNSW=153; rank_mean=191.400; match_rank= a 1 1 0 2 2 2 2 2 0 1 0 0 0 c 1 1 1 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 2 1 0 0 0 t 0 0 1 0 0 0 0 0 0 0 0 0 0
IDD4_MA1371.1_JASPAR_shift0 (IDD4:MA1371.1:JASPAR)	0.780	0.459	7.610	0.893	0.886	175	346	100	138	201	192.000		; 1_m7_assembly_7 versus IDD4_MA1371.1_JASPAR (IDD4:MA1371.1:JASPAR); m=15/87; ncol2=17; w=-3; offset=-3; strand=D; shift=0; score= 192; mAsAAAAmGACAA ; cor=0.780; Ncor=0.459; logoDP=7.610; NsEucl=0.893; NSW=0.886; rcor=175; rNcor=346; rlogoDP=100; rNsEucl=138; rNSW=201; rank_mean=192.000; match_rank= a 213 429 57 430 510 470 529 186 16 580 0 585 581 c 233 5 250 0 0 29 42 301 0 10 591 0 3 g 42 140 242 14 0 78 16 78 575 0 0 6 7 t 103 17 42 147 81 14 4 26 0 1 0 0 0
DOF5.6_M0657_1.02_CISBP_shift2 (DOF5.6:M0657_1.02:CISBP)	0.808	0.514	4.435	0.883	0.904	125	274	207	242	122	194.000		; 1_m7_assembly_7 versus DOF5.6_M0657_1.02_CISBP (DOF5.6:M0657_1.02:CISBP); m=16/87; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score= 194; --vawAAmGy--- ; cor=0.808; Ncor=0.514; logoDP=4.435; NsEucl=0.883; NSW=0.904; rcor=125; rNcor=274; rlogoDP=207; rNsEucl=242; rNSW=122; rank_mean=194.000; match_rank= a 0 0 25 36 43 95 93 61 5 15 0 0 0 c 0 0 26 17 8 4 4 31 3 25 0 0 0 g 0 0 26 23 11 0 0 6 88 21 0 0 0 t 0 0 23 24 38 1 3 2 4 39 0 0 0
CDF2_MA0973.2_JASPAR_shift3 (CDF2:MA0973.2:JASPAR)	0.788	0.552	6.181	0.876	0.892	160	227	142	290	163	196.400		; 1_m7_assembly_7 versus CDF2_MA0973.2_JASPAR (CDF2:MA0973.2:JASPAR); m=17/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 196.4; ---aWAAAGy--- ; cor=0.788; Ncor=0.552; logoDP=6.181; NsEucl=0.876; NSW=0.892; rcor=160; rNcor=227; rlogoDP=142; rNsEucl=290; rNSW=163; rank_mean=196.400; match_rank= a 0 0 0 608 693 980 979 868 17 53 0 0 0 c 0 0 0 92 16 10 10 29 7 295 0 0 0 g 0 0 0 150 41 4 2 81 969 154 0 0 0 t 0 0 0 150 250 5 9 22 6 498 0 0 0
DOF4.2_MA1273.2_JASPAR_shift3 (DOF4.2:MA1273.2:JASPAR)	0.731	0.665	8.092	0.886	0.871	329	84	79	208	299	199.800		; 1_m7_assembly_7 versus DOF4.2_MA1273.2_JASPAR (DOF4.2:MA1273.2:JASPAR); m=18/87; ncol2=11; w=0; offset=0; strand=D; shift=3; score= 199.8; ---AAAAAGGyaa ; cor=0.731; Ncor=0.665; logoDP=8.092; NsEucl=0.886; NSW=0.871; rcor=329; rNcor=84; rlogoDP=79; rNsEucl=208; rNSW=299; rank_mean=199.800; match_rank= a 0 0 0 477 580 598 598 598 0 112 89 346 390 c 0 0 0 38 0 0 0 0 0 0 253 60 38 g 0 0 0 48 0 0 0 0 598 463 28 70 72 t 0 0 0 35 18 0 0 0 0 23 228 122 98
ARF16_MA1688.1_JASPAR_shift3 (ARF16:MA1688.1:JASPAR)	0.746	0.533	5.006	0.895	0.891	277	250	186	128	176	203.400		; 1_m7_assembly_7 versus ARF16_MA1688.1_JASPAR (ARF16:MA1688.1:JASPAR); m=19/87; ncol2=14; w=0; offset=0; strand=D; shift=3; score= 203.4; ---racAAGACAA ; cor=0.746; Ncor=0.533; logoDP=5.006; NsEucl=0.895; NSW=0.891; rcor=277; rNcor=250; rlogoDP=186; rNsEucl=128; rNSW=176; rank_mean=203.400; match_rank= a 0 0 0 2470 3249 980 5651 6555 302 7230 357 7198 6756 c 0 0 0 1473 1643 5307 950 574 374 142 6981 220 261 g 0 0 0 2135 1614 965 578 511 6749 359 283 214 338 t 0 0 0 1754 1326 580 653 192 407 101 211 200 477
IDD7_MA1374.2_JASPAR_shift1 (IDD7:MA1374.2:JASPAR)	0.756	0.540	7.604	0.888	0.875	242	239	102	193	279	211.000		; 1_m7_assembly_7 versus IDD7_MA1374.2_JASPAR (IDD7:MA1374.2:JASPAR); m=20/87; ncol2=14; w=-2; offset=-2; strand=D; shift=1; score= 211; -rsAAAAcGACAA ; cor=0.756; Ncor=0.540; logoDP=7.604; NsEucl=0.888; NSW=0.875; rcor=242; rNcor=239; rlogoDP=102; rNsEucl=193; rNSW=279; rank_mean=211.000; match_rank= a 0 394 95 400 489 424 528 136 2 575 0 574 576 c 0 20 224 3 1 49 31 375 0 9 585 0 2 g 0 153 197 36 0 88 23 57 583 0 0 11 6 t 0 18 69 146 95 24 3 17 0 1 0 0 1
PHYPADRAFT_140773_MA0987.1_JASPAR_shift2 (PHYPADRAFT_140773:MA0987.1:JASPAR)	0.749	0.613	3.823	0.887	0.884	263	141	251	205	208	213.600		; 1_m7_assembly_7 versus PHYPADRAFT_140773_MA0987.1_JASPAR (PHYPADRAFT_140773:MA0987.1:JASPAR); m=21/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 213.6; --srwAAAGydr- ; cor=0.749; Ncor=0.613; logoDP=3.823; NsEucl=0.887; NSW=0.884; rcor=263; rNcor=141; rlogoDP=251; rNsEucl=205; rNSW=208; rank_mean=213.600; match_rank= a 0 0 243 302 396 888 892 715 72 182 271 280 0 c 0 0 266 215 111 43 46 205 22 258 193 218 0 g 0 0 253 260 173 10 1 28 839 229 271 272 0 t 0 0 238 222 321 60 61 52 67 331 265 229 0
IDD11_MA2104.1_JASPAR_shift3 (IDD11:MA2104.1:JASPAR)	0.740	0.617	7.458	0.885	0.867	294	138	110	218	315	215.000		; 1_m7_assembly_7 versus IDD11_MA2104.1_JASPAR (IDD11:MA2104.1:JASPAR); m=22/87; ncol2=12; w=0; offset=0; strand=D; shift=3; score= 215; ---AAaACGACAA ; cor=0.740; Ncor=0.617; logoDP=7.458; NsEucl=0.885; NSW=0.867; rcor=294; rNcor=138; rlogoDP=110; rNsEucl=218; rNSW=315; rank_mean=215.000; match_rank= a 0 0 0 680 846 641 915 209 7 991 0 1000 959 c 0 0 0 12 2 70 39 682 0 9 1000 0 12 g 0 0 0 72 2 142 41 75 990 0 0 0 24 t 0 0 0 236 150 147 5 34 3 0 0 0 5
e_gw1.170.52.1_M0659_1.02_CISBP_shift2 (e_gw1.170.52.1:M0659_1.02:CISBP)	0.748	0.612	3.850	0.887	0.884	267	144	250	206	211	215.600		; 1_m7_assembly_7 versus e_gw1.170.52.1_M0659_1.02_CISBP (e_gw1.170.52.1:M0659_1.02:CISBP); m=23/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 215.6; --srwAAAGydr- ; cor=0.748; Ncor=0.612; logoDP=3.850; NsEucl=0.887; NSW=0.884; rcor=267; rNcor=144; rlogoDP=250; rNsEucl=206; rNSW=211; rank_mean=215.600; match_rank= a 0 0 24 30 40 89 89 72 7 18 27 28 0 c 0 0 27 22 11 4 5 20 2 26 19 22 0 g 0 0 25 26 17 1 0 3 84 23 27 27 0 t 0 0 24 22 32 6 6 5 7 33 27 23 0
At1g14580.ampDAP_M0322_AthalianaCistrome_shift0 (At1g14580.ampDAP:M0322:AthalianaCistrome)	0.763	0.449	6.875	0.892	0.883	219	364	124	153	220	216.000		; 1_m7_assembly_7 versus At1g14580.ampDAP_M0322_AthalianaCistrome (At1g14580.ampDAP:M0322:AthalianaCistrome); m=24/87; ncol2=17; w=-3; offset=-3; strand=D; shift=0; score= 216; mrsWAAAmGACAA ; cor=0.763; Ncor=0.449; logoDP=6.875; NsEucl=0.892; NSW=0.883; rcor=219; rNcor=364; rlogoDP=124; rNsEucl=153; rNSW=220; rank_mean=216.000; match_rank= a 178 383 59 421 466 414 505 173 8 544 0 581 566 c 255 10 248 0 0 41 55 315 0 40 584 0 13 g 41 180 238 11 0 119 20 61 563 0 0 3 4 t 110 11 39 152 118 10 4 35 13 0 0 0 1
IDD2_MA1373.1_JASPAR_shift0 (IDD2:MA1373.1:JASPAR)	0.757	0.504	7.786	0.888	0.874	239	284	87	199	282	218.200		; 1_m7_assembly_7 versus IDD2_MA1373.1_JASPAR (IDD2:MA1373.1:JASPAR); m=25/87; ncol2=15; w=-3; offset=-3; strand=D; shift=0; score= 218.2; hRswAAAMGACAA ; cor=0.757; Ncor=0.504; logoDP=7.786; NsEucl=0.888; NSW=0.874; rcor=239; rNcor=284; rlogoDP=87; rNsEucl=199; rNSW=282; rank_mean=218.200; match_rank= a 28 64 8 57 87 68 91 24 2 94 5 93 83 c 37 4 34 1 0 6 2 67 0 0 89 0 11 g 2 25 33 2 0 17 1 3 92 0 0 1 0 t 27 1 19 34 7 3 0 0 0 0 0 0 0
At5g66730.DAP_M0321_AthalianaCistrome_shift0 (At5g66730.DAP:M0321:AthalianaCistrome)	0.763	0.449	7.749	0.889	0.878	221	365	93	170	247	219.200		; 1_m7_assembly_7 versus At5g66730.DAP_M0321_AthalianaCistrome (At5g66730.DAP:M0321:AthalianaCistrome); m=26/87; ncol2=17; w=-3; offset=-3; strand=D; shift=0; score= 219.2; hasAAAAmGACAA ; cor=0.763; Ncor=0.449; logoDP=7.749; NsEucl=0.889; NSW=0.878; rcor=221; rNcor=365; rlogoDP=93; rNsEucl=170; rNSW=247; rank_mean=219.200; match_rank= a 188 351 133 405 502 403 541 163 4 586 0 578 581 c 186 57 165 10 0 25 23 348 0 0 586 0 0 g 62 121 209 43 0 75 17 59 582 0 0 8 5 t 150 57 79 128 84 83 5 16 0 0 0 0 0
MNB1A_MA0053.1_JASPAR_shift5 (MNB1A:MA0053.1:JASPAR)	0.853	0.426	7.808	0.856	0.896	63	402	85	414	146	222.000		; 1_m7_assembly_7 versus MNB1A_MA0053.1_JASPAR (MNB1A:MA0053.1:JASPAR); m=27/87; ncol2=5; w=0; offset=2; strand=D; shift=5; score= 222; -----AAAGc--- ; cor=0.853; Ncor=0.426; logoDP=7.808; NsEucl=0.856; NSW=0.896; rcor=63; rNcor=402; rlogoDP=85; rNsEucl=414; rNSW=146; rank_mean=222.000; match_rank= a 0 0 0 0 0 15 15 15 0 3 0 0 0 c 0 0 0 0 0 0 0 0 0 9 0 0 0 g 0 0 0 0 0 0 0 0 15 0 0 0 0 t 0 0 0 0 0 0 0 0 0 3 0 0 0
JKD_MA1156.2_JASPAR_rc_shift3 (JKD:MA1156.2:JASPAR_rc)	0.759	0.632	0.181	0.890	0.879	232	118	396	163	237	229.200		; 1_m7_assembly_7 versus JKD_MA1156.2_JASPAR_rc (JKD:MA1156.2:JASPAR_rc); m=28/87; ncol2=12; w=0; offset=0; strand=R; shift=3; score= 229.2; ---AAAAmGACAA ; cor=0.759; Ncor=0.632; logoDP=0.181; NsEucl=0.890; NSW=0.879; rcor=232; rNcor=118; rlogoDP=396; rNsEucl=163; rNSW=237; rank_mean=229.200; match_rank= a 0 0 0 427 509 406 525 172 21 583 0 586 587 c 0 0 0 8 0 34 42 331 0 13 596 0 4 g 0 0 0 27 0 99 20 62 564 0 0 10 5 t 0 0 0 134 87 57 9 31 11 0 0 0 0
DOF5.7_MA0984.2_JASPAR_shift5 (DOF5.7:MA0984.2:JASPAR)	0.878	0.439	4.166	0.862	0.905	43	383	228	378	116	229.600		; 1_m7_assembly_7 versus DOF5.7_MA0984.2_JASPAR (DOF5.7:MA0984.2:JASPAR); m=29/87; ncol2=5; w=0; offset=2; strand=D; shift=5; score= 229.6; -----AAArr--- ; cor=0.878; Ncor=0.439; logoDP=4.166; NsEucl=0.862; NSW=0.905; rcor=43; rNcor=383; rlogoDP=228; rNsEucl=378; rNSW=116; rank_mean=229.600; match_rank= a 0 0 0 0 0 684 970 899 363 485 0 0 0 c 0 0 0 0 0 12 4 3 42 61 0 0 0 g 0 0 0 0 0 61 10 79 589 443 0 0 0 t 0 0 0 0 0 243 16 19 6 11 0 0 0
ADOF2_M0649_1.02_CISBP_shift2 (ADOF2:M0649_1.02:CISBP)	0.801	0.510	2.532	0.876	0.892	138	278	289	291	165	232.200		; 1_m7_assembly_7 versus ADOF2_M0649_1.02_CISBP (ADOF2:M0649_1.02:CISBP); m=30/87; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score= 232.2; --srwAAmGy--- ; cor=0.801; Ncor=0.510; logoDP=2.532; NsEucl=0.876; NSW=0.892; rcor=138; rNcor=278; rlogoDP=289; rNsEucl=291; rNSW=165; rank_mean=232.200; match_rank= a 0 0 24 31 35 81 80 50 11 20 0 0 0 c 0 0 26 20 14 7 9 40 3 25 0 0 0 g 0 0 27 25 17 4 2 2 78 21 0 0 0 t 0 0 23 24 34 8 9 8 8 34 0 0 0
ONAC127_UN0430.2_JASPAR_shift1 (ONAC127:UN0430.2:JASPAR)	0.810	0.405	4.535	0.872	0.901	117	446	202	323	134	244.400		; 1_m7_assembly_7 versus ONAC127_UN0430.2_JASPAR (ONAC127:UN0430.2:JASPAR); m=31/87; ncol2=8; w=-2; offset=-2; strand=D; shift=1; score= 244.4; -AAGAAAAG---- ; cor=0.810; Ncor=0.405; logoDP=4.535; NsEucl=0.872; NSW=0.901; rcor=117; rNcor=446; rlogoDP=202; rNsEucl=323; rNSW=134; rank_mean=244.400; match_rank= a 0 65 67 4 57 61 63 58 3 0 0 0 0 c 0 0 0 0 2 5 0 1 7 0 0 0 0 g 0 0 0 62 7 1 5 3 56 0 0 0 0 t 0 3 1 2 2 1 0 6 2 0 0 0 0
Zm00001d027846_MA1823.1_JASPAR_shift3 (Zm00001d027846:MA1823.1:JASPAR)	0.714	0.595	5.931	0.886	0.870	383	167	157	211	305	244.600		; 1_m7_assembly_7 versus Zm00001d027846_MA1823.1_JASPAR (Zm00001d027846:MA1823.1:JASPAR); m=32/87; ncol2=12; w=0; offset=0; strand=D; shift=3; score= 244.6; ---arAAAGAAAA ; cor=0.714; Ncor=0.595; logoDP=5.931; NsEucl=0.886; NSW=0.870; rcor=383; rNcor=167; rlogoDP=157; rNsEucl=211; rNSW=305; rank_mean=244.600; match_rank= a 0 0 0 430 399 818 893 929 23 896 915 914 752 c 0 0 0 159 157 46 17 6 24 29 11 27 53 g 0 0 0 223 264 86 44 30 866 38 28 33 123 t 0 0 0 175 167 37 33 22 74 24 33 13 59
IDD7_MA1374.1_JASPAR_shift0 (IDD7:MA1374.1:JASPAR)	0.756	0.420	7.604	0.888	0.875	242	414	102	193	279	246.000		; 1_m7_assembly_7 versus IDD7_MA1374.1_JASPAR (IDD7:MA1374.1:JASPAR); m=33/87; ncol2=18; w=-3; offset=-3; strand=D; shift=0; score= 246; mrsAAAAcGACAA ; cor=0.756; Ncor=0.420; logoDP=7.604; NsEucl=0.888; NSW=0.875; rcor=242; rNcor=414; rlogoDP=102; rNsEucl=193; rNSW=279; rank_mean=246.000; match_rank= a 190 394 95 400 489 424 528 136 2 575 0 574 576 c 232 20 224 3 1 49 31 375 0 9 585 0 2 g 44 153 197 36 0 88 23 57 583 0 0 11 6 t 119 18 69 146 95 24 3 17 0 1 0 0 1
ENY_UN0398.2_JASPAR_rc_shift3 (ENY:UN0398.2:JASPAR_rc)	0.755	0.629	0.139	0.888	0.875	250	124	409	185	263	246.200		; 1_m7_assembly_7 versus ENY_UN0398.2_JASPAR_rc (ENY:UN0398.2:JASPAR_rc); m=34/87; ncol2=12; w=0; offset=0; strand=R; shift=3; score= 246.2; ---aAaAmGACAA ; cor=0.755; Ncor=0.629; logoDP=0.139; NsEucl=0.888; NSW=0.875; rcor=250; rNcor=124; rlogoDP=409; rNsEucl=185; rNSW=263; rank_mean=246.200; match_rank= a 0 0 0 637 820 661 911 250 0 993 0 997 988 c 0 0 0 32 3 62 45 627 0 5 1000 0 7 g 0 0 0 92 2 133 40 96 1000 2 0 3 5 t 0 0 0 239 175 145 3 27 0 0 0 0 0
IDD1_MA2396.1_JASPAR_rc_shift3 (IDD1:MA2396.1:JASPAR_rc)	0.755	0.629	0.139	0.888	0.875	248	123	408	187	266	246.400		; 1_m7_assembly_7 versus IDD1_MA2396.1_JASPAR_rc (IDD1:MA2396.1:JASPAR_rc); m=35/87; ncol2=12; w=0; offset=0; strand=R; shift=3; score= 246.4; ---aAaAmGACAA ; cor=0.755; Ncor=0.629; logoDP=0.139; NsEucl=0.888; NSW=0.875; rcor=248; rNcor=123; rlogoDP=408; rNsEucl=187; rNSW=266; rank_mean=246.400; match_rank= a 0 0 0 636 820 660 910 250 0 993 0 996 988 c 0 0 0 31 3 62 45 626 0 5 1000 0 6 g 0 0 0 92 1 132 40 95 1000 1 0 3 5 t 0 0 0 238 174 144 3 26 0 0 0 0 0
e_gw1.149.93.1_M0658_1.02_CISBP_shift2 (e_gw1.149.93.1:M0658_1.02:CISBP)	0.810	0.515	1.719	0.871	0.884	119	273	306	329	210	247.400		; 1_m7_assembly_7 versus e_gw1.149.93.1_M0658_1.02_CISBP (e_gw1.149.93.1:M0658_1.02:CISBP); m=36/87; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score= 247.4; --vrwaAmGy--- ; cor=0.810; Ncor=0.515; logoDP=1.719; NsEucl=0.871; NSW=0.884; rcor=119; rNcor=273; rlogoDP=306; rNsEucl=329; rNSW=210; rank_mean=247.400; match_rank= a 0 0 26 33 40 65 70 57 8 17 0 0 0 c 0 0 26 20 14 13 11 25 8 26 0 0 0 g 0 0 26 25 16 8 5 0 76 23 0 0 0 t 0 0 22 22 30 14 14 18 8 34 0 0 0
IDD5_MA1370.2_JASPAR_rc_shift1 (IDD5:MA1370.2:JASPAR_rc)	0.758	0.541	0.737	0.888	0.876	236	238	334	181	258	249.400		; 1_m7_assembly_7 versus IDD5_MA1370.2_JASPAR_rc (IDD5:MA1370.2:JASPAR_rc); m=37/87; ncol2=14; w=-2; offset=-2; strand=R; shift=1; score= 249.4; -rswAAACGACAA ; cor=0.758; Ncor=0.541; logoDP=0.737; NsEucl=0.888; NSW=0.876; rcor=236; rNcor=238; rlogoDP=334; rNsEucl=181; rNSW=258; rank_mean=249.400; match_rank= a 0 107 15 101 131 122 146 32 0 159 1 157 151 c 0 3 75 0 8 10 8 111 0 0 159 0 7 g 0 44 57 6 4 25 5 14 160 1 0 3 2 t 0 6 13 53 17 3 1 3 0 0 0 0 0
AT1G64620_M0647_1.02_CISBP_shift2 (AT1G64620:M0647_1.02:CISBP)	0.733	0.599	3.125	0.883	0.877	324	162	273	241	252	250.400		; 1_m7_assembly_7 versus AT1G64620_M0647_1.02_CISBP (AT1G64620:M0647_1.02:CISBP); m=38/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 250.4; --vrwAAaGtdr- ; cor=0.733; Ncor=0.599; logoDP=3.125; NsEucl=0.883; NSW=0.877; rcor=324; rNcor=162; rlogoDP=273; rNsEucl=241; rNSW=252; rank_mean=250.400; match_rank= a 0 0 25 32 41 81 83 66 7 17 27 29 0 c 0 0 26 20 10 7 7 23 2 24 19 21 0 g 0 0 26 25 14 4 0 3 85 23 27 27 0 t 0 0 23 23 35 8 10 8 6 36 27 23 0
DOF1.8_MA0981.1_JASPAR_shift2 (DOF1.8:MA0981.1:JASPAR)	0.732	0.599	3.109	0.883	0.877	328	163	274	243	253	252.200		; 1_m7_assembly_7 versus DOF1.8_MA0981.1_JASPAR (DOF1.8:MA0981.1:JASPAR); m=39/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 252.2; --vawAAaGtdr- ; cor=0.732; Ncor=0.599; logoDP=3.109; NsEucl=0.883; NSW=0.877; rcor=328; rNcor=163; rlogoDP=274; rNsEucl=243; rNSW=253; rank_mean=252.200; match_rank= a 0 0 251 321 415 812 831 658 65 170 268 288 0 c 0 0 259 197 100 72 64 233 23 241 189 209 0 g 0 0 256 250 135 38 3 27 846 231 270 269 0 t 0 0 234 233 350 77 102 83 65 359 273 234 0
Dof2_MA0020.2_JASPAR_shift5 (Dof2:MA0020.2:JASPAR)	0.831	0.415	7.765	0.845	0.880	87	422	89	431	232	252.200		; 1_m7_assembly_7 versus Dof2_MA0020.2_JASPAR (Dof2:MA0020.2:JASPAR); m=40/87; ncol2=5; w=0; offset=2; strand=D; shift=5; score= 252.2; -----AAAGc--- ; cor=0.831; Ncor=0.415; logoDP=7.765; NsEucl=0.845; NSW=0.880; rcor=87; rNcor=422; rlogoDP=89; rNsEucl=431; rNSW=232; rank_mean=252.200; match_rank= a 0 0 0 0 0 21 21 21 0 3 0 0 0 c 0 0 0 0 0 0 0 0 0 14 0 0 0 g 0 0 0 0 0 0 0 0 21 2 0 0 0 t 0 0 0 0 0 0 0 0 0 2 0 0 0
IDD5.ampDAP_M0309_AthalianaCistrome_rc_shift0 (IDD5.ampDAP:M0309:AthalianaCistrome_rc)	0.767	0.451	0.182	0.894	0.888	206	358	395	134	191	256.800		; 1_m7_assembly_7 versus IDD5.ampDAP_M0309_AthalianaCistrome_rc (IDD5.ampDAP:M0309:AthalianaCistrome_rc); m=41/87; ncol2=17; w=-3; offset=-3; strand=R; shift=0; score= 256.8; mrsAAAAmGACAA ; cor=0.767; Ncor=0.451; logoDP=0.182; NsEucl=0.894; NSW=0.888; rcor=206; rNcor=358; rlogoDP=395; rNsEucl=134; rNSW=191; rank_mean=256.800; match_rank= a 174 406 64 448 483 438 492 222 53 533 0 597 588 c 255 14 258 4 4 39 60 274 0 66 599 0 5 g 60 164 238 17 0 108 43 55 527 0 0 2 6 t 110 15 39 130 112 14 4 48 19 0 0 0 0
DOF5.7_MA0984.1_JASPAR_shift4 (DOF5.7:MA0984.1:JASPAR)	0.743	0.595	4.206	0.873	0.871	285	169	226	315	300	259.000		; 1_m7_assembly_7 versus DOF5.7_MA0984.1_JASPAR (DOF5.7:MA0984.1:JASPAR); m=42/87; ncol2=8; w=0; offset=1; strand=D; shift=4; score= 259; ----aAAArrgg- ; cor=0.743; Ncor=0.595; logoDP=4.206; NsEucl=0.873; NSW=0.871; rcor=285; rNcor=169; rlogoDP=226; rNsEucl=315; rNSW=300; rank_mean=259.000; match_rank= a 0 0 0 0 448 684 970 899 363 485 102 174 0 c 0 0 0 0 86 12 4 3 42 61 191 215 0 g 0 0 0 0 224 61 10 79 589 443 460 408 0 t 0 0 0 0 241 243 16 19 6 11 247 204 0
DOF5.4_MA1280.2_JASPAR_shift3 (DOF5.4:MA1280.2:JASPAR)	0.760	0.532	7.737	0.860	0.864	229	253	94	392	334	260.400		; 1_m7_assembly_7 versus DOF5.4_MA1280.2_JASPAR (DOF5.4:MA1280.2:JASPAR); m=43/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 260.4; ---AAAAAGk--- ; cor=0.760; Ncor=0.532; logoDP=7.737; NsEucl=0.860; NSW=0.864; rcor=229; rNcor=253; rlogoDP=94; rNsEucl=392; rNSW=334; rank_mean=260.400; match_rank= a 0 0 0 529 456 599 600 600 0 22 0 0 0 c 0 0 0 17 0 0 0 0 0 37 0 0 0 g 0 0 0 34 3 0 0 0 600 209 0 0 0 t 0 0 0 20 141 1 0 0 0 332 0 0 0
WRKY17.ampDAP_M0837_AthalianaCistrome_shift3 (WRKY17.ampDAP:M0837:AthalianaCistrome)	0.719	0.553	8.824	0.877	0.848	359	223	56	281	392	262.200		; 1_m7_assembly_7 versus WRKY17.ampDAP_M0837_AthalianaCistrome (WRKY17.ampDAP:M0837:AthalianaCistrome); m=44/87; ncol2=13; w=0; offset=0; strand=D; shift=3; score= 262.2; ---aaAAAGTCAA ; cor=0.719; Ncor=0.553; logoDP=8.824; NsEucl=0.877; NSW=0.848; rcor=359; rNcor=223; rlogoDP=56; rNsEucl=281; rNSW=392; rank_mean=262.200; match_rank= a 0 0 0 172 246 353 383 386 0 0 0 389 388 c 0 0 0 69 66 3 0 0 0 20 389 0 0 g 0 0 0 62 44 22 1 3 389 0 0 0 0 t 0 0 0 86 33 11 5 0 0 369 0 0 1
IDD5_MA1370.1_JASPAR_rc_shift0 (IDD5:MA1370.1:JASPAR_rc)	0.758	0.474	0.737	0.888	0.876	236	323	334	181	258	266.400		; 1_m7_assembly_7 versus IDD5_MA1370.1_JASPAR_rc (IDD5:MA1370.1:JASPAR_rc); m=45/87; ncol2=16; w=-3; offset=-3; strand=R; shift=0; score= 266.4; crswAAACGACAA ; cor=0.758; Ncor=0.474; logoDP=0.737; NsEucl=0.888; NSW=0.876; rcor=236; rNcor=323; rlogoDP=334; rNsEucl=181; rNSW=258; rank_mean=266.400; match_rank= a 37 107 15 101 131 122 146 32 0 159 1 157 151 c 78 3 75 0 8 10 8 111 0 0 159 0 7 g 14 44 57 6 4 25 5 14 160 1 0 3 2 t 31 6 13 53 17 3 1 3 0 0 0 0 0
TRANSCRIPTION_1qna_B_3D-footprint_rc_shift1 (TRANSCRIPTION:1qna_B:3D-footprint_rc)	0.805	0.403	3.317	0.869	0.897	129	450	268	346	144	267.400		; 1_m7_assembly_7 versus TRANSCRIPTION_1qna_B_3D-footprint_rc (TRANSCRIPTION:1qna_B:3D-footprint_rc); m=46/87; ncol2=8; w=-2; offset=-2; strand=R; shift=1; score= 267.4; -TTTAAaAg---- ; cor=0.805; Ncor=0.403; logoDP=3.317; NsEucl=0.869; NSW=0.897; rcor=129; rNcor=450; rlogoDP=268; rNsEucl=346; rNSW=144; rank_mean=267.400; match_rank= a 0 1 0 10 96 96 64 96 12 0 0 0 0 c 0 10 0 1 0 0 10 0 10 0 0 0 0 g 0 0 0 0 0 0 12 0 64 0 0 0 0 t 0 85 96 85 0 0 10 0 10 0 0 0 0
DOF3.5_MA1276.2_JASPAR_shift3 (DOF3.5:MA1276.2:JASPAR)	0.752	0.526	7.728	0.860	0.863	254	257	95	393	341	268.000		; 1_m7_assembly_7 versus DOF3.5_MA1276.2_JASPAR (DOF3.5:MA1276.2:JASPAR); m=47/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 268; ---AwAAAGk--- ; cor=0.752; Ncor=0.526; logoDP=7.728; NsEucl=0.860; NSW=0.863; rcor=254; rNcor=257; rlogoDP=95; rNsEucl=393; rNSW=341; rank_mean=268.000; match_rank= a 0 0 0 467 348 599 599 599 0 2 0 0 0 c 0 0 0 4 0 0 0 0 0 6 0 0 0 g 0 0 0 103 0 0 0 0 599 219 0 0 0 t 0 0 0 25 251 0 0 0 0 372 0 0 0
NUC_MA1157.2_JASPAR_rc_shift3 (NUC:MA1157.2:JASPAR_rc)	0.743	0.619	0.138	0.885	0.869	286	135	410	213	308	270.400		; 1_m7_assembly_7 versus NUC_MA1157.2_JASPAR_rc (NUC:MA1157.2:JASPAR_rc); m=48/87; ncol2=12; w=0; offset=0; strand=R; shift=3; score= 270.4; ---wAaAcGACAA ; cor=0.743; Ncor=0.619; logoDP=0.138; NsEucl=0.885; NSW=0.869; rcor=286; rNcor=135; rlogoDP=410; rNsEucl=213; rNSW=308; rank_mean=270.400; match_rank= a 0 0 0 366 493 372 515 120 0 565 0 562 557 c 0 0 0 15 3 46 33 381 0 5 570 0 8 g 0 0 0 41 0 89 19 51 570 0 0 8 5 t 0 0 0 148 74 63 3 18 0 0 0 0 0
WRKY28.ampDAP_M0844_AthalianaCistrome_shift4 (WRKY28.ampDAP:M0844:AthalianaCistrome)	0.732	0.549	9.172	0.868	0.844	327	231	38	352	405	270.600		; 1_m7_assembly_7 versus WRKY28.ampDAP_M0844_AthalianaCistrome (WRKY28.ampDAP:M0844:AthalianaCistrome); m=49/87; ncol2=11; w=0; offset=1; strand=D; shift=4; score= 270.6; ----aAAAGTCAA ; cor=0.732; Ncor=0.549; logoDP=9.172; NsEucl=0.868; NSW=0.844; rcor=327; rNcor=231; rlogoDP=38; rNsEucl=352; rNSW=405; rank_mean=270.600; match_rank= a 0 0 0 0 71 120 128 127 0 0 0 123 128 c 0 0 0 0 25 0 0 0 0 14 128 0 0 g 0 0 0 0 16 7 0 1 128 0 0 0 0 t 0 0 0 0 16 1 0 0 0 114 0 5 0
PHYPADRAFT_38837_MA1022.1_JASPAR_shift2 (PHYPADRAFT_38837:MA1022.1:JASPAR)	0.718	0.588	3.269	0.881	0.873	361	184	270	257	290	272.400		; 1_m7_assembly_7 versus PHYPADRAFT_38837_MA1022.1_JASPAR (PHYPADRAFT_38837:MA1022.1:JASPAR); m=50/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 272.4; --vrwAAaGydm- ; cor=0.718; Ncor=0.588; logoDP=3.269; NsEucl=0.881; NSW=0.873; rcor=361; rNcor=184; rlogoDP=270; rNsEucl=257; rNSW=290; rank_mean=272.400; match_rank= a 0 0 251 343 463 828 855 644 61 150 259 283 0 c 0 0 264 186 85 68 62 216 27 269 174 262 0 g 0 0 257 254 129 24 1 54 860 207 307 227 0 t 0 0 228 217 323 81 82 86 52 374 259 227 0
IDD6_MA1160.2_JASPAR_rc_shift0 (IDD6:MA1160.2:JASPAR_rc)	0.755	0.472	0.595	0.888	0.875	245	328	342	186	264	273.000		; 1_m7_assembly_7 versus IDD6_MA1160.2_JASPAR_rc (IDD6:MA1160.2:JASPAR_rc); m=51/87; ncol2=16; w=-3; offset=-3; strand=R; shift=0; score= 273; mRsWAAAcGACAA ; cor=0.755; Ncor=0.472; logoDP=0.595; NsEucl=0.888; NSW=0.875; rcor=245; rNcor=328; rlogoDP=342; rNsEucl=186; rNSW=264; rank_mean=273.000; match_rank= a 72 168 24 171 201 190 217 54 3 225 1 235 240 c 117 4 108 1 6 13 14 154 0 15 240 1 0 g 15 66 89 5 0 32 9 21 237 2 1 6 2 t 38 4 21 65 35 7 2 13 2 0 0 0 0
IDD6_MA2348.1_JASPAR_rc_shift0 (IDD6:MA2348.1:JASPAR_rc)	0.756	0.472	0.598	0.888	0.875	244	327	341	188	270	274.000		; 1_m7_assembly_7 versus IDD6_MA2348.1_JASPAR_rc (IDD6:MA2348.1:JASPAR_rc); m=52/87; ncol2=16; w=-3; offset=-3; strand=R; shift=0; score= 274; mRsWAAAcGACAA ; cor=0.756; Ncor=0.472; logoDP=0.598; NsEucl=0.888; NSW=0.875; rcor=244; rNcor=327; rlogoDP=341; rNsEucl=188; rNSW=270; rank_mean=274.000; match_rank= a 297 694 99 706 830 785 896 223 12 929 4 971 991 c 483 16 446 4 24 53 57 636 0 61 991 4 0 g 61 272 367 20 0 132 37 86 979 8 4 24 8 t 157 16 86 268 144 28 8 53 8 0 0 0 0
IDD11_UN0402.1_JASPAR_shift0 (IDD11:UN0402.1:JASPAR)	0.740	0.411	7.456	0.885	0.867	295	432	111	220	317	275.000		; 1_m7_assembly_7 versus IDD11_UN0402.1_JASPAR (IDD11:UN0402.1:JASPAR); m=53/87; ncol2=18; w=-3; offset=-3; strand=D; shift=0; score= 275; masAAaACGACAA ; cor=0.740; Ncor=0.411; logoDP=7.456; NsEucl=0.885; NSW=0.867; rcor=295; rNcor=432; rlogoDP=111; rNsEucl=220; rNSW=317; rank_mean=275.000; match_rank= a 285.47 621 210 680 846 641 914.53 209 6.838 991 0 1000 959 c 370.94 87.179 332 11.966 1.709 70.085 39.316 682 0 8.547 1000 0 11.966 g 113 209 323 71.795 1.709 141.88 41.026 75.214 990 0 0 0 23.932 t 231 83.761 135 236 150 147 5.128 34.188 3.419 0 0 0 5.128
gw1.385.26.1_M0663_1.02_CISBP_shift2 (gw1.385.26.1:M0663_1.02:CISBP)	0.717	0.587	3.306	0.881	0.873	369	188	269	258	291	275.000		; 1_m7_assembly_7 versus gw1.385.26.1_M0663_1.02_CISBP (gw1.385.26.1:M0663_1.02:CISBP); m=54/87; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 275; --vrwAAaGydm- ; cor=0.717; Ncor=0.587; logoDP=3.306; NsEucl=0.881; NSW=0.873; rcor=369; rNcor=188; rlogoDP=269; rNsEucl=258; rNSW=291; rank_mean=275.000; match_rank= a 0 0 25 34 46 83 86 64 6 15 26 28 0 c 0 0 26 19 9 7 6 22 3 27 17 26 0 g 0 0 26 25 13 2 0 5 86 21 31 23 0 t 0 0 23 22 32 8 8 9 5 37 26 23 0
PBF_MA0064.1_JASPAR_shift5 (PBF:MA0064.1:JASPAR)	0.815	0.408	7.718	0.839	0.870	108	438	96	441	303	277.200		; 1_m7_assembly_7 versus PBF_MA0064.1_JASPAR (PBF:MA0064.1:JASPAR); m=55/87; ncol2=5; w=0; offset=2; strand=D; shift=5; score= 277.2; -----AAAGy--- ; cor=0.815; Ncor=0.408; logoDP=7.718; NsEucl=0.839; NSW=0.870; rcor=108; rNcor=438; rlogoDP=96; rNsEucl=441; rNSW=303; rank_mean=277.200; match_rank= a 0 0 0 0 0 16 16 16 0 1 0 0 0 c 0 0 0 0 0 0 0 0 0 9 0 0 0 g 0 0 0 0 0 0 0 0 16 1 0 0 0 t 0 0 0 0 0 0 0 0 0 5 0 0 0
fgenesh1_pg.C_Chr_08.0001000114_M0664_1.02_CISBP_shift2 (fgenesh1_pg.C_Chr_08.0001000114:M0664_1.02:CISBP)	0.793	0.505	1.374	0.866	0.874	151	283	322	364	286	281.200		; 1_m7_assembly_7 versus fgenesh1_pg.C_Chr_08.0001000114_M0664_1.02_CISBP (fgenesh1_pg.C_Chr_08.0001000114:M0664_1.02:CISBP); m=56/87; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score= 281.2; --sawaamGt--- ; cor=0.793; Ncor=0.505; logoDP=1.374; NsEucl=0.866; NSW=0.874; rcor=151; rNcor=283; rlogoDP=322; rNsEucl=364; rNSW=286; rank_mean=281.200; match_rank= a 0 0 24 36 41 62 65 55 13 17 0 0 0 c 0 0 26 19 15 13 11 29 10 24 0 0 0 g 0 0 27 23 15 9 7 0 70 21 0 0 0 t 0 0 23 22 29 16 17 16 7 38 0 0 0
AT1G47655.ampDAP_M0271_AthalianaCistrome_rc_shift1 (AT1G47655.ampDAP:M0271:AthalianaCistrome_rc)	0.727	0.485	0.202	0.891	0.882	340	304	392	156	222	282.800		; 1_m7_assembly_7 versus AT1G47655.ampDAP_M0271_AthalianaCistrome_rc (AT1G47655.ampDAP:M0271:AthalianaCistrome_rc); m=57/87; ncol2=15; w=-2; offset=-2; strand=R; shift=1; score= 282.8; -araaAAAGaaAA ; cor=0.727; Ncor=0.485; logoDP=0.202; NsEucl=0.891; NSW=0.882; rcor=340; rNcor=304; rlogoDP=392; rNsEucl=156; rNSW=222; rank_mean=282.800; match_rank= a 0 264 197 352 353 516 559 529 15 210 348 424 443 c 0 72 138 82 61 0 0 0 5 134 79 12 30 g 0 119 183 108 63 51 12 42 551 97 66 120 47 t 0 116 53 29 94 4 0 0 0 130 78 15 51
ARF16_MA1688.2_JASPAR_shift5 (ARF16:MA1688.2:JASPAR)	0.746	0.497	5.004	0.870	0.866	274	291	187	338	327	283.400		; 1_m7_assembly_7 versus ARF16_MA1688.2_JASPAR (ARF16:MA1688.2:JASPAR); m=58/87; ncol2=10; w=0; offset=2; strand=D; shift=5; score= 283.4; -----cAAGACAA ; cor=0.746; Ncor=0.497; logoDP=5.004; NsEucl=0.870; NSW=0.866; rcor=274; rNcor=291; rlogoDP=187; rNsEucl=338; rNSW=327; rank_mean=283.400; match_rank= a 0 0 0 0 0 980 5651 6555 302 7230 357 7198 6756 c 0 0 0 0 0 5307 950 574 374 142 6981 220 261 g 0 0 0 0 0 965 578 511 6749 359 283 214 338 t 0 0 0 0 0 580 653 192 407 101 211 200 477
XP_013599228.1_C2H2_2_AT2G02080_EEAD0669_EEADannot_shift0 (XP_013599228.1_C2H2_2_AT2G02080:EEAD0669:EEADannot)	0.724	0.482	8.918	0.874	0.842	344	307	55	310	414	286.000		; 1_m7_assembly_7 versus XP_013599228.1_C2H2_2_AT2G02080_EEAD0669_EEADannot (XP_013599228.1_C2H2_2_AT2G02080:EEAD0669:EEADannot); m=59/87; ncol2=15; w=-3; offset=-3; strand=D; shift=0; score= 286; mAsAAAACGACAA ; cor=0.724; Ncor=0.482; logoDP=8.918; NsEucl=0.874; NSW=0.842; rcor=344; rNcor=307; rlogoDP=55; rNsEucl=310; rNSW=414; rank_mean=286.000; match_rank= a 30 79 6 79 90 84 100 9 0 100 0 100 100 c 55 2 50 0 0 7 0 84 0 0 100 0 0 g 2 19 39 0 0 9 0 6 100 0 0 0 0 t 13 0 5 21 10 0 0 1 0 0 0 0 0
DOF4.7_M0652_1.02_CISBP_shift1 (DOF4.7:M0652_1.02:CISBP)	0.774	0.452	1.983	0.868	0.879	192	356	298	349	239	286.800		; 1_m7_assembly_7 versus DOF4.7_M0652_1.02_CISBP (DOF4.7:M0652_1.02:CISBP); m=60/87; ncol2=9; w=-2; offset=-2; strand=D; shift=1; score= 286.8; -hrawAAmGt--- ; cor=0.774; Ncor=0.452; logoDP=1.983; NsEucl=0.868; NSW=0.879; rcor=192; rNcor=356; rlogoDP=298; rNsEucl=349; rNSW=239; rank_mean=286.800; match_rank= a 0 26 25 37 37 79 74 46 14 19 0 0 0 c 0 25 23 17 12 6 10 39 4 23 0 0 0 g 0 24 29 22 13 3 4 6 71 18 0 0 0 t 0 25 23 24 38 12 12 9 11 40 0 0 0
ARF4_EEAD0023_EEADannot_rc_shift7 (ARF4:EEAD0023:EEADannot_rc)	0.814	0.407	3.539	0.849	0.886	110	441	259	428	200	287.600		; 1_m7_assembly_7 versus ARF4_EEAD0023_EEADannot_rc (ARF4:EEAD0023:EEADannot_rc); m=61/87; ncol2=5; w=0; offset=4; strand=R; shift=7; score= 287.6; -------mGACA- ; cor=0.814; Ncor=0.407; logoDP=3.539; NsEucl=0.849; NSW=0.886; rcor=110; rNcor=441; rlogoDP=259; rNsEucl=428; rNSW=200; rank_mean=287.600; match_rank= a 0 0 0 0 0 0 0 1840 47 4611 18 4649 0 c 0 0 0 0 0 0 0 2298 19 11 4599 0 0 g 0 0 0 0 0 0 0 360 4556 9 15 0 0 t 0 0 0 0 0 0 0 153 27 19 18 0 0
At5g66730.ampDAP_M0310_AthalianaCistrome_rc_shift0 (At5g66730.ampDAP:M0310:AthalianaCistrome_rc)	0.755	0.444	0.155	0.888	0.876	247	371	403	183	261	293.000		; 1_m7_assembly_7 versus At5g66730.ampDAP_M0310_AthalianaCistrome_rc (At5g66730.ampDAP:M0310:AthalianaCistrome_rc); m=62/87; ncol2=17; w=-3; offset=-3; strand=R; shift=0; score= 293; mavaAaAmGACAA ; cor=0.755; Ncor=0.444; logoDP=0.155; NsEucl=0.888; NSW=0.876; rcor=247; rNcor=371; rlogoDP=403; rNsEucl=183; rNSW=261; rank_mean=293.000; match_rank= a 172 320 157 379 488 393 542 149 0 591 0 593 588 c 210 77 181 19 2 37 27 373 0 3 595 0 4 g 65 142 193 55 1 79 24 57 595 1 0 2 3 t 148 56 64 142 104 86 2 16 0 0 0 0 0
ENY_UN0398.1_JASPAR_rc_shift0 (ENY:UN0398.1:JASPAR_rc)	0.755	0.444	0.155	0.888	0.876	249	372	404	184	262	294.200		; 1_m7_assembly_7 versus ENY_UN0398.1_JASPAR_rc (ENY:UN0398.1:JASPAR_rc); m=63/87; ncol2=17; w=-3; offset=-3; strand=R; shift=0; score= 294.2; mavaAaAmGACAA ; cor=0.755; Ncor=0.444; logoDP=0.155; NsEucl=0.888; NSW=0.876; rcor=249; rNcor=372; rlogoDP=404; rNsEucl=184; rNSW=262; rank_mean=294.200; match_rank= a 289 538 264 637 820 661 911 250.42 0 993 0 997 988 c 353 129 304 31.933 3.361 62.185 45.378 627 0 5.042 1000 0 6.723 g 109 239 324.37 92.437 1.681 133 40.336 95.798 1000 1.681 0 3.361 5.042 t 249 94.118 108 239 174.79 145 3.361 26.891 0 0 0 0 0
Dof2_MA0020.1_JASPAR_shift5 (Dof2:MA0020.1:JASPAR)	0.765	0.459	7.781	0.838	0.842	213	344	88	445	412	300.400		; 1_m7_assembly_7 versus Dof2_MA0020.1_JASPAR (Dof2:MA0020.1:JASPAR); m=64/87; ncol2=6; w=0; offset=2; strand=D; shift=5; score= 300.4; -----AAAGcm-- ; cor=0.765; Ncor=0.459; logoDP=7.781; NsEucl=0.838; NSW=0.842; rcor=213; rNcor=344; rlogoDP=88; rNsEucl=445; rNSW=412; rank_mean=300.400; match_rank= a 0 0 0 0 0 21 21 21 0 3 7 0 0 c 0 0 0 0 0 0 0 0 0 14 6 0 0 g 0 0 0 0 0 0 0 0 21 2 3 0 0 t 0 0 0 0 0 0 0 0 0 2 5 0 0
IDD2.ampDAP_M0320_AthalianaCistrome_rc_shift0 (IDD2.ampDAP:M0320:AthalianaCistrome_rc)	0.750	0.417	0.133	0.889	0.876	261	418	413	179	255	305.200		; 1_m7_assembly_7 versus IDD2.ampDAP_M0320_AthalianaCistrome_rc (IDD2.ampDAP:M0320:AthalianaCistrome_rc); m=65/87; ncol2=18; w=-3; offset=-3; strand=R; shift=0; score= 305.2; masaAaAmGACAA ; cor=0.750; Ncor=0.417; logoDP=0.133; NsEucl=0.889; NSW=0.876; rcor=261; rNcor=418; rlogoDP=413; rNsEucl=179; rNSW=255; rank_mean=305.200; match_rank= a 188 288 142 386 452 339 507 165 11 572 0 578 569 c 183 84 157 12 5 49 30 345 0 6 578 0 8 g 71 144 205 61 0 97 36 53 567 0 0 0 0 t 136 62 74 119 121 93 5 15 0 0 0 0 1
WRKY8.DAP_M0792_AthalianaCistrome_shift2 (WRKY8.DAP:M0792:AthalianaCistrome)	0.704	0.469	8.147	0.875	0.843	430	334	76	303	408	310.200		; 1_m7_assembly_7 versus WRKY8.DAP_M0792_AthalianaCistrome (WRKY8.DAP:M0792:AthalianaCistrome); m=66/87; ncol2=15; w=-1; offset=-1; strand=D; shift=2; score= 310.2; --raaAAAGTCAA ; cor=0.704; Ncor=0.469; logoDP=8.147; NsEucl=0.875; NSW=0.843; rcor=430; rNcor=334; rlogoDP=76; rNsEucl=303; rNSW=408; rank_mean=310.200; match_rank= a 0 0 186 275 363 528 566 575 0 0 0 600 600 c 0 0 104 98 79 8 0 0 0 0 600 0 0 g 0 0 173 108 90 37 7 24 600 0 0 0 0 t 0 0 137 119 68 27 27 1 0 600 0 0 0
WRKY45.ampDAP_M0821_AthalianaCistrome_shift4 (WRKY45.ampDAP:M0821:AthalianaCistrome)	0.709	0.532	8.387	0.862	0.829	409	254	71	381	438	310.600		; 1_m7_assembly_7 versus WRKY45.ampDAP_M0821_AthalianaCistrome (WRKY45.ampDAP:M0821:AthalianaCistrome); m=67/87; ncol2=11; w=0; offset=1; strand=D; shift=4; score= 310.6; ----aAAAGTCAA ; cor=0.709; Ncor=0.532; logoDP=8.387; NsEucl=0.862; NSW=0.829; rcor=409; rNcor=254; rlogoDP=71; rNsEucl=381; rNSW=438; rank_mean=310.600; match_rank= a 0 0 0 0 355 526 545 576 1 0 0 581 581 c 0 0 0 0 97 7 0 0 0 5 583 2 0 g 0 0 0 0 65 29 7 6 582 1 0 0 2 t 0 0 0 0 66 21 31 1 0 577 0 0 0
Zm00001d027846_MA1823.2_JASPAR_shift5 (Zm00001d027846:MA1823.2:JASPAR)	0.714	0.571	5.927	0.859	0.840	379	205	158	397	417	311.200		; 1_m7_assembly_7 versus Zm00001d027846_MA1823.2_JASPAR (Zm00001d027846:MA1823.2:JASPAR); m=68/87; ncol2=8; w=0; offset=2; strand=D; shift=5; score= 311.2; -----AAAGAAAA ; cor=0.714; Ncor=0.571; logoDP=5.927; NsEucl=0.859; NSW=0.840; rcor=379; rNcor=205; rlogoDP=158; rNsEucl=397; rNSW=417; rank_mean=311.200; match_rank= a 0 0 0 0 0 818 893 929 23 896 915 914 752 c 0 0 0 0 0 46 17 6 24 29 11 27 53 g 0 0 0 0 0 86 44 30 866 38 28 33 123 t 0 0 0 0 0 37 33 22 74 24 33 13 59
PHYPADRAFT_153324_MA0989.1_JASPAR_shift2 (PHYPADRAFT_153324:MA0989.1:JASPAR)	0.717	0.522	4.020	0.868	0.860	367	263	236	354	350	314.000		; 1_m7_assembly_7 versus PHYPADRAFT_153324_MA0989.1_JASPAR (PHYPADRAFT_153324:MA0989.1:JASPAR); m=69/87; ncol2=9; w=-1; offset=-1; strand=D; shift=2; score= 314; --vrwAAaGyd-- ; cor=0.717; Ncor=0.522; logoDP=4.020; NsEucl=0.868; NSW=0.860; rcor=367; rNcor=263; rlogoDP=236; rNsEucl=354; rNSW=350; rank_mean=314.000; match_rank= a 0 0 253 334 482 861 926 672 71 139 285 0 0 c 0 0 264 193 71 62 36 147 27 288 158 0 0 g 0 0 261 255 118 13 0 52 898 195 297 0 0 t 0 0 222 218 330 65 38 129 5 378 260 0 0
WRKY45_MA1087.2_JASPAR_shift2 (WRKY45:MA1087.2:JASPAR)	0.702	0.468	7.381	0.876	0.846	440	335	112	289	400	315.200		; 1_m7_assembly_7 versus WRKY45_MA1087.2_JASPAR (WRKY45:MA1087.2:JASPAR); m=70/87; ncol2=15; w=-1; offset=-1; strand=D; shift=2; score= 315.2; --waaAAAGTCAA ; cor=0.702; Ncor=0.468; logoDP=7.381; NsEucl=0.876; NSW=0.846; rcor=440; rNcor=335; rlogoDP=112; rNsEucl=289; rNSW=400; rank_mean=315.200; match_rank= a 0 0 739 878 1345 1914 1960 2087 16 4 12 2160 2155 c 0 0 377 445 339 75 34 16 3 5 2166 16 8 g 0 0 475 339 218 85 51 59 2159 7 6 2 15 t 0 0 603 532 292 120 149 32 16 2178 10 16 16
WRKY45_MA1087.3_JASPAR_shift4 (WRKY45:MA1087.3:JASPAR)	0.700	0.573	7.379	0.862	0.830	452	203	113	376	436	316.000		; 1_m7_assembly_7 versus WRKY45_MA1087.3_JASPAR (WRKY45:MA1087.3:JASPAR); m=71/87; ncol2=10; w=0; offset=1; strand=D; shift=4; score= 316; ----aAAAGTCAA ; cor=0.700; Ncor=0.573; logoDP=7.379; NsEucl=0.862; NSW=0.830; rcor=452; rNcor=203; rlogoDP=113; rNsEucl=376; rNSW=436; rank_mean=316.000; match_rank= a 0 0 0 0 1345 1914 1960 2087 16 4 12 2160 2155 c 0 0 0 0 339 75 34 16 3 5 2166 16 8 g 0 0 0 0 218 85 51 59 2159 7 6 2 15 t 0 0 0 0 292 120 149 32 16 2178 10 16 16
e_gw1.392.16.1_M0660_1.02_CISBP_shift2 (e_gw1.392.16.1:M0660_1.02:CISBP)	0.714	0.519	4.005	0.867	0.859	381	265	238	356	358	319.600		; 1_m7_assembly_7 versus e_gw1.392.16.1_M0660_1.02_CISBP (e_gw1.392.16.1:M0660_1.02:CISBP); m=72/87; ncol2=9; w=-1; offset=-1; strand=D; shift=2; score= 319.6; --vrwAAaGyd-- ; cor=0.714; Ncor=0.519; logoDP=4.005; NsEucl=0.867; NSW=0.859; rcor=381; rNcor=265; rlogoDP=238; rNsEucl=356; rNSW=358; rank_mean=319.600; match_rank= a 0 0 25 33 48 86 92 67 7 13 28 0 0 c 0 0 26 19 7 6 4 15 3 29 16 0 0 g 0 0 27 26 12 2 0 5 90 20 30 0 0 t 0 0 22 22 33 6 4 13 0 38 26 0 0
WRKY7_MA1313.2_JASPAR_rc_shift4 (WRKY7:MA1313.2:JASPAR_rc)	0.710	0.532	5.701	0.861	0.827	404	251	168	386	440	329.800		; 1_m7_assembly_7 versus WRKY7_MA1313.2_JASPAR_rc (WRKY7:MA1313.2:JASPAR_rc); m=73/87; ncol2=11; w=0; offset=1; strand=R; shift=4; score= 329.8; ----aAAAGTCAA ; cor=0.710; Ncor=0.532; logoDP=5.701; NsEucl=0.861; NSW=0.827; rcor=404; rNcor=251; rlogoDP=168; rNsEucl=386; rNSW=440; rank_mean=329.800; match_rank= a 0 0 0 0 382 539 579 578 1 0 1 594 594 c 0 0 0 0 81 4 0 0 0 7 593 0 0 g 0 0 0 0 70 25 3 13 593 0 0 0 0 t 0 0 0 0 61 26 12 3 0 587 0 0 0
AtIDD11.ampDAP_M0316_AthalianaCistrome_rc_shift0 (AtIDD11.ampDAP:M0316:AthalianaCistrome_rc)	0.740	0.411	0.145	0.885	0.867	296	433	405	221	318	334.600		; 1_m7_assembly_7 versus AtIDD11.ampDAP_M0316_AthalianaCistrome_rc (AtIDD11.ampDAP:M0316:AthalianaCistrome_rc); m=74/87; ncol2=18; w=-3; offset=-3; strand=R; shift=0; score= 334.6; masAAaACGACAA ; cor=0.740; Ncor=0.411; logoDP=0.145; NsEucl=0.885; NSW=0.867; rcor=296; rNcor=433; rlogoDP=405; rNsEucl=221; rNSW=318; rank_mean=334.600; match_rank= a 167 363 123 398 495 375 535 122 4 580 0 585 561 c 217 51 194 7 1 41 23 399 0 5 585 0 7 g 66 122 189 42 1 83 24 44 579 0 0 0 14 t 135 49 79 138 88 86 3 20 2 0 0 0 3
MGP.ampDAP_M0314_AthalianaCistrome_rc_shift0 (MGP.ampDAP:M0314:AthalianaCistrome_rc)	0.740	0.411	0.130	0.884	0.865	292	430	414	229	329	338.800		; 1_m7_assembly_7 versus MGP.ampDAP_M0314_AthalianaCistrome_rc (MGP.ampDAP:M0314:AthalianaCistrome_rc); m=75/87; ncol2=18; w=-3; offset=-3; strand=R; shift=0; score= 338.8; maswAaACGACAA ; cor=0.740; Ncor=0.411; logoDP=0.130; NsEucl=0.884; NSW=0.865; rcor=292; rNcor=430; rlogoDP=414; rNsEucl=229; rNSW=329; rank_mean=338.800; match_rank= a 176 360 130 379 512 389 549 124 2 592 0 592 587 c 234 63 195 12 0 35 22 410 0 0 592 0 3 g 49 136 198 52 0 77 19 46 590 0 0 0 2 t 133 33 69 149 80 91 2 12 0 0 0 0 0
Dof3_MA0021.1_JASPAR_shift5 (Dof3:MA0021.1:JASPAR)	0.730	0.438	7.809	0.826	0.819	334	388	84	452	449	341.400		; 1_m7_assembly_7 versus Dof3_MA0021.1_JASPAR (Dof3:MA0021.1:JASPAR); m=76/87; ncol2=6; w=0; offset=2; strand=D; shift=5; score= 341.4; -----AAAGyv-- ; cor=0.730; Ncor=0.438; logoDP=7.809; NsEucl=0.826; NSW=0.819; rcor=334; rNcor=388; rlogoDP=84; rNsEucl=452; rNSW=449; rank_mean=341.400; match_rank= a 0 0 0 0 0 21 21 21 0 0 6 0 0 c 0 0 0 0 0 0 0 0 0 10 6 0 0 g 0 0 0 0 0 0 0 0 21 3 9 0 0 t 0 0 0 0 0 0 0 0 0 8 0 0 0
WRKY27_MA1318.2_JASPAR_rc_shift4 (WRKY27:MA1318.2:JASPAR_rc)	0.700	0.525	5.752	0.861	0.826	453	258	165	389	444	341.800		; 1_m7_assembly_7 versus WRKY27_MA1318.2_JASPAR_rc (WRKY27:MA1318.2:JASPAR_rc); m=77/87; ncol2=11; w=0; offset=1; strand=R; shift=4; score= 341.8; ----aAAAGTCAA ; cor=0.700; Ncor=0.525; logoDP=5.752; NsEucl=0.861; NSW=0.826; rcor=453; rNcor=258; rlogoDP=165; rNsEucl=389; rNSW=444; rank_mean=341.800; match_rank= a 0 0 0 0 377 521 542 574 0 2 0 600 600 c 0 0 0 0 89 2 2 0 0 3 600 0 0 g 0 0 0 0 64 34 10 20 600 0 0 0 0 t 0 0 0 0 70 43 46 6 0 595 0 0 0
WRKY50_MA1317.1_JASPAR_rc_shift2 (WRKY50:MA1317.1:JASPAR_rc)	0.700	0.539	2.003	0.874	0.840	451	240	297	314	418	344.000		; 1_m7_assembly_7 versus WRKY50_MA1317.1_JASPAR_rc (WRKY50:MA1317.1:JASPAR_rc); m=78/87; ncol2=13; w=-1; offset=-1; strand=R; shift=2; score= 344; --waAAAAGTCAA ; cor=0.700; Ncor=0.539; logoDP=2.003; NsEucl=0.874; NSW=0.840; rcor=451; rNcor=240; rlogoDP=297; rNsEucl=314; rNSW=418; rank_mean=344.000; match_rank= a 0 0 215 274 406 502 511 543 0 0 0 565 559 c 0 0 87 90 48 14 4 1 0 1 568 0 2 g 0 0 124 88 63 23 10 22 568 0 0 0 1 t 0 0 142 116 51 29 43 2 0 567 0 3 6
WRKY45.DAP_M0805_AthalianaCistrome_rc_shift3 (WRKY45.DAP:M0805:AthalianaCistrome_rc)	0.705	0.587	0.119	0.874	0.842	428	186	417	308	413	350.400		; 1_m7_assembly_7 versus WRKY45.DAP_M0805_AthalianaCistrome_rc (WRKY45.DAP:M0805:AthalianaCistrome_rc); m=79/87; ncol2=12; w=0; offset=0; strand=R; shift=3; score= 350.4; ---aaAAAGTCAA ; cor=0.705; Ncor=0.587; logoDP=0.119; NsEucl=0.874; NSW=0.842; rcor=428; rNcor=186; rlogoDP=417; rNsEucl=308; rNSW=413; rank_mean=350.400; match_rank= a 0 0 0 272 391 533 558 583 0 0 0 600 597 c 0 0 0 130 82 15 8 0 0 1 599 0 0 g 0 0 0 92 69 25 8 16 600 0 1 0 2 t 0 0 0 106 58 27 26 1 0 599 0 0 1
WRKY7_MA1313.1_JASPAR_rc_shift3 (WRKY7:MA1313.1:JASPAR_rc)	0.712	0.508	0.178	0.875	0.844	398	281	397	298	403	355.400		; 1_m7_assembly_7 versus WRKY7_MA1313.1_JASPAR_rc (WRKY7:MA1313.1:JASPAR_rc); m=80/87; ncol2=14; w=0; offset=0; strand=R; shift=3; score= 355.4; ---aaAAAGTCAA ; cor=0.712; Ncor=0.508; logoDP=0.178; NsEucl=0.875; NSW=0.844; rcor=398; rNcor=281; rlogoDP=397; rNsEucl=298; rNSW=403; rank_mean=355.400; match_rank= a 0 0 0 269 382 539 579 578 1 0 1 594 594 c 0 0 0 118 81 4 0 0 0 7 593 0 0 g 0 0 0 78 70 25 3 13 593 0 0 0 0 t 0 0 0 129 61 26 12 3 0 587 0 0 0
NUC.ampDAP_M0330_AthalianaCistrome_rc_shift0 (NUC.ampDAP:M0330:AthalianaCistrome_rc)	0.723	0.425	0.136	0.879	0.854	345	406	412	265	373	360.200		; 1_m7_assembly_7 versus NUC.ampDAP_M0330_AthalianaCistrome_rc (NUC.ampDAP:M0330:AthalianaCistrome_rc); m=81/87; ncol2=17; w=-3; offset=-3; strand=R; shift=0; score= 360.2; mrswAAACGACAA ; cor=0.723; Ncor=0.425; logoDP=0.136; NsEucl=0.879; NSW=0.854; rcor=345; rNcor=406; rlogoDP=412; rNsEucl=265; rNSW=373; rank_mean=360.200; match_rank= a 100 228 61 217 307 235 319 49 1 345 0 345 334 c 149 19 124 5 0 23 19 272 0 0 345 0 11 g 21 87 116 21 0 72 7 16 344 0 0 0 0 t 75 11 44 102 38 15 0 8 0 0 0 0 0
NLP7_MA1794.2_JASPAR_rc_shift4 (NLP7:MA1794.2:JASPAR_rc)	0.702	0.561	0.343	0.861	0.846	443	216	360	387	401	361.400		; 1_m7_assembly_7 versus NLP7_MA1794.2_JASPAR_rc (NLP7:MA1794.2:JASPAR_rc); m=82/87; ncol2=8; w=0; offset=1; strand=R; shift=4; score= 361.4; ----AArrGyCA- ; cor=0.702; Ncor=0.561; logoDP=0.343; NsEucl=0.861; NSW=0.846; rcor=443; rNcor=216; rlogoDP=360; rNsEucl=387; rNSW=401; rank_mean=361.400; match_rank= a 0 0 0 0 946 909 570 516 0 156 0 807 0 c 0 0 0 0 0 0 22 40 0 339 934 2 0 g 0 0 0 0 15 81 390 444 1000 175 0 182 0 t 0 0 0 0 39 10 18 0 0 329 66 10 0
WRKY8.ampDAP_M0820_AthalianaCistrome_rc_shift3 (WRKY8.ampDAP:M0820:AthalianaCistrome_rc)	0.714	0.476	0.130	0.873	0.838	385	318	415	316	423	371.400		; 1_m7_assembly_7 versus WRKY8.ampDAP_M0820_AthalianaCistrome_rc (WRKY8.ampDAP:M0820:AthalianaCistrome_rc); m=83/87; ncol2=15; w=0; offset=0; strand=R; shift=3; score= 371.4; ---aAAAAGTCAA ; cor=0.714; Ncor=0.476; logoDP=0.130; NsEucl=0.873; NSW=0.838; rcor=385; rNcor=318; rlogoDP=415; rNsEucl=316; rNSW=423; rank_mean=371.400; match_rank= a 0 0 0 316 451 579 589 595 0 0 0 599 599 c 0 0 0 81 46 1 0 0 0 1 599 0 0 g 0 0 0 90 55 6 1 4 599 0 0 0 0 t 0 0 0 112 47 13 9 0 0 598 0 0 0
TAGL1_UN0426.2_JASPAR_shift1 (TAGL1:UN0426.2:JASPAR)	0.705	0.411	5.834	0.843	0.828	425	431	160	436	439	378.200		; 1_m7_assembly_7 versus TAGL1_UN0426.2_JASPAR (TAGL1:UN0426.2:JASPAR); m=84/87; ncol2=9; w=-2; offset=-2; strand=D; shift=1; score= 378.2; -agAAAAAGG--- ; cor=0.705; Ncor=0.411; logoDP=5.834; NsEucl=0.843; NSW=0.828; rcor=425; rNcor=431; rlogoDP=160; rNsEucl=436; rNSW=439; rank_mean=378.200; match_rank= a 0 2930 1091 4576 4641 4647 4590 4562 320 461 0 0 0 c 0 676 351 61 47 23 14 37 46 83 0 0 0 g 0 401 2722 106 85 83 109 85 4328 4129 0 0 0 t 0 844 687 108 78 98 138 167 157 178 0 0 0
gw1.12.257.1_M0662_1.02_CISBP_shift3 (gw1.12.257.1:M0662_1.02:CISBP)	0.717	0.502	0.478	0.841	0.824	371	287	352	438	446	378.800		; 1_m7_assembly_7 versus gw1.12.257.1_M0662_1.02_CISBP (gw1.12.257.1:M0662_1.02:CISBP); m=85/87; ncol2=7; w=0; offset=0; strand=D; shift=3; score= 378.8; ---vwaamgy--- ; cor=0.717; Ncor=0.502; logoDP=0.478; NsEucl=0.841; NSW=0.824; rcor=371; rNcor=287; rlogoDP=352; rNsEucl=438; rNSW=446; rank_mean=378.800; match_rank= a 0 0 0 25 26 51 52 35 20 21 0 0 0 c 0 0 0 26 21 18 19 39 13 25 0 0 0 g 0 0 0 26 21 15 11 5 54 23 0 0 0 t 0 0 0 23 32 16 18 21 13 31 0 0 0
LOC_Os08g44050.1_C2H2_2_AT2G02080_EEAD0634_EEADannot_rc_shift0 (LOC_Os08g44050.1_C2H2_2_AT2G02080:EEAD0634:EEADannot_rc)	0.709	0.472	0.138	0.871	0.835	412	326	411	330	431	382.000		; 1_m7_assembly_7 versus LOC_Os08g44050.1_C2H2_2_AT2G02080_EEAD0634_EEADannot_rc (LOC_Os08g44050.1_C2H2_2_AT2G02080:EEAD0634:EEADannot_rc); m=86/87; ncol2=15; w=-3; offset=-3; strand=R; shift=0; score= 382; mAsWAAACGACAA ; cor=0.709; Ncor=0.472; logoDP=0.138; NsEucl=0.871; NSW=0.835; rcor=412; rNcor=326; rlogoDP=411; rNsEucl=330; rNSW=431; rank_mean=382.000; match_rank= a 29 71 5 72 94 78 99 6 0 100 0 100 100 c 50 5 52 0 0 9 1 88 0 0 100 0 0 g 4 24 37 1 0 10 0 5 100 0 0 0 0 t 17 0 6 27 6 3 0 1 0 0 0 0 0
WRKY27_MA1318.1_JASPAR_rc_shift4 (WRKY27:MA1318.1:JASPAR_rc)	0.700	0.450	0.213	0.861	0.826	453	361	390	389	444	407.400		; 1_m7_assembly_7 versus WRKY27_MA1318.1_JASPAR_rc (WRKY27:MA1318.1:JASPAR_rc); m=87/87; ncol2=13; w=0; offset=1; strand=R; shift=4; score= 407.4; ----aAAAGTCAA ; cor=0.700; Ncor=0.450; logoDP=0.213; NsEucl=0.861; NSW=0.826; rcor=453; rNcor=361; rlogoDP=390; rNsEucl=389; rNSW=444; rank_mean=407.400; match_rank= a 0 0 0 0 377 521 542 574 0 2 0 600 600 c 0 0 0 0 89 2 2 0 0 3 600 0 0 g 0 0 0 0 64 34 10 20 600 0 0 0 0 t 0 0 0 0 70 43 46 6 0 595 0 0 0

One-to-n matrix alignment; reference matrix: 1_m11_assembly_11_shift4 ; 39 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
1_m11_assembly_11_shift4 (assembly_11)
; 1_m11_assembly_11 (assembly_11); m=0 (reference); ncol1=10; shift=4; ncol=14; ----waACATGGww ; Alignment reference a 0 0 0 0 43 48 132 0 132 0 0 0 48 33 c 0 0 0 0 20 31 0 132 0 0 0 0 19 26 g 0 0 0 0 28 23 0 0 0 0 132 132 25 19 t 0 0 0 0 41 30 0 0 0 132 0 0 40 54

BHLH17_B73_1_m1_EEAD0222_EEADannot_shift4 (BHLH17_B73_1_m1:EEAD0222:EEADannot) 0.835 0.668 8.736 0.893 0.908 80 81 58 142 103 92.800 51
; 1_m11_assembly_11 versus BHLH17_B73_1_m1_EEAD0222_EEADannot (BHLH17_B73_1_m1:EEAD0222:EEADannot); m=1/39; ncol2=8; w=0; offset=0; strand=D; shift=4; score= 92.8; ----gCACATGs-- ; cor=0.835; Ncor=0.668; logoDP=8.736; NsEucl=0.893; NSW=0.908; rcor=80; rNcor=81; rlogoDP=58; rNsEucl=142; rNSW=103; rank_mean=92.800; match_rank=51 a 0 0 0 0 4 2 100 0 76 0 0 5 0 0 c 0 0 0 0 11 98 0 100 0 0 0 25 0 0 g 0 0 0 0 61 0 0 0 24 0 100 50 0 0 t 0 0 0 0 24 0 0 0 0 100 0 20 0 0

BHLH17_Mo17_1_EEAD0223_EEADannot_shift4 (BHLH17_Mo17_1:EEAD0223:EEADannot) 0.834 0.667 8.804 0.892 0.906 82 82 57 154 112 97.400
; 1_m11_assembly_11 versus BHLH17_Mo17_1_EEAD0223_EEADannot (BHLH17_Mo17_1:EEAD0223:EEADannot); m=2/39; ncol2=8; w=0; offset=0; strand=D; shift=4; score= 97.4; ----kCACATGs-- ; cor=0.834; Ncor=0.667; logoDP=8.804; NsEucl=0.892; NSW=0.906; rcor=82; rNcor=82; rlogoDP=57; rNsEucl=154; rNSW=112; rank_mean=97.400; match_rank= a 0 0 0 0 3 0 100 0 76 0 0 3 0 0 c 0 0 0 0 5 100 0 100 0 0 0 25 0 0 g 0 0 0 0 64 0 0 0 24 0 100 54 0 0 t 0 0 0 0 28 0 0 0 0 100 0 18 0 0

ARF4_DYAD0_EEAD0024_EEADannot_shift4 (ARF4_DYAD0:EEAD0024:EEADannot) 0.766 0.766 9.613 0.896 0.892 210 26 30 125 169 112.000
; 1_m11_assembly_11 versus ARF4_DYAD0_EEAD0024_EEADannot (ARF4_DYAD0:EEAD0024:EEADannot); m=3/39; ncol2=10; w=0; offset=0; strand=D; shift=4; score= 112; ----arACATGTyt ; cor=0.766; Ncor=0.766; logoDP=9.613; NsEucl=0.896; NSW=0.892; rcor=210; rNcor=26; rlogoDP=30; rNsEucl=125; rNSW=169; rank_mean=112.000; match_rank= a 0 0 0 0 950 982 2458 0 2458 0 0 0 382 350 c 0 0 0 0 569 359 0 2458 0 0 0 0 735 589 g 0 0 0 0 589 735 0 0 0 0 2458 0 359 569 t 0 0 0 0 350 382 0 0 0 2458 0 2458 982 950

FUS3_MA0565.2_JASPAR_shift4 (FUS3:MA0565.2:JASPAR) 0.750 0.750 9.485 0.889 0.876 260 30 35 176 254 151.000
; 1_m11_assembly_11 versus FUS3_MA0565.2_JASPAR (FUS3:MA0565.2:JASPAR); m=4/39; ncol2=10; w=0; offset=0; strand=D; shift=4; score= 151; ----whACATGCAw ; cor=0.750; Ncor=0.750; logoDP=9.485; NsEucl=0.889; NSW=0.876; rcor=260; rNcor=30; rlogoDP=35; rNsEucl=176; rNSW=254; rank_mean=151.000; match_rank= a 0 0 0 0 469 355 1146 0 1141 3 0 0 1055 446 c 0 0 0 0 152 309 0 1146 2 5 1 1146 18 125 g 0 0 0 0 218 143 0 0 2 1 1145 0 28 98 t 0 0 0 0 307 339 0 0 1 1137 0 0 45 477

PIF3_MA0560.1_JASPAR_rc_shift4 (PIF3:MA0560.1:JASPAR_rc) 0.749 0.749 6.086 0.892 0.883 262 31 149 149 216 161.400
; 1_m11_assembly_11 versus PIF3_MA0560.1_JASPAR_rc (PIF3:MA0560.1:JASPAR_rc); m=5/39; ncol2=10; w=0; offset=0; strand=R; shift=4; score= 161.4; ----yCACGTGGch ; cor=0.749; Ncor=0.749; logoDP=6.086; NsEucl=0.892; NSW=0.883; rcor=262; rNcor=31; rlogoDP=149; rNsEucl=149; rNSW=216; rank_mean=161.400; match_rank= a 0 0 0 0 98 0 527 0 118 0 0 15 116 143 c 0 0 0 0 137 527 0 527 0 0 0 94 222 148 g 0 0 0 0 33 0 0 0 409 0 527 399 131 26 t 0 0 0 0 259 0 0 0 0 527 0 19 58 210

ARF18_DYAD7_EEAD0031_EEADannot_shift4 (ARF18_DYAD7:EEAD0031:EEADannot) 0.763 0.424 5.935 0.902 0.904 218 409 156 87 124 198.800
; 1_m11_assembly_11 versus ARF18_DYAD7_EEAD0031_EEADannot (ARF18_DYAD7:EEAD0031:EEADannot); m=6/39; ncol2=18; w=0; offset=0; strand=D; shift=4; score= 198.8; ----arACAwrrwa ; cor=0.763; Ncor=0.424; logoDP=5.935; NsEucl=0.902; NSW=0.904; rcor=218; rNcor=409; rlogoDP=156; rNsEucl=87; rNSW=124; rank_mean=198.800; match_rank= a 0 0 0 0 367 183 655 0 655 192 169 195 189 303 c 0 0 0 0 152 58 0 655 0 86 117 106 101 108 g 0 0 0 0 100 369 0 0 0 98 292 225 94 137 t 0 0 0 0 36 45 0 0 0 279 77 129 271 107

ABF4_MA1659.1_JASPAR_rc_shift2 (ABF4:MA1659.1:JASPAR_rc) 0.731 0.609 4.929 0.892 0.883 331 145 191 148 215 206.000
; 1_m11_assembly_11 versus ABF4_MA1659.1_JASPAR_rc (ABF4:MA1659.1:JASPAR_rc); m=7/39; ncol2=12; w=-2; offset=-2; strand=R; shift=2; score= 206; --drwsACGTGGma ; cor=0.731; Ncor=0.609; logoDP=4.929; NsEucl=0.892; NSW=0.883; rcor=331; rNcor=145; rlogoDP=191; rNsEucl=148; rNSW=215; rank_mean=206.000; match_rank= a 0 0 1666 1793 1781 253 5815 200 161 73 62 155 1762 2164 c 0 0 849 928 1360 1825 52 5470 44 47 86 62 2625 1105 g 0 0 1901 1865 583 3358 58 166 5666 20 5763 5169 689 1325 t 0 0 1630 1460 2322 610 121 210 175 5906 135 660 970 1452

GBF1_M0268_1.02_CISBP_shift4 (GBF1:M0268_1.02:CISBP) 0.706 0.706 5.318 0.891 0.882 422 56 175 159 226 207.600
; 1_m11_assembly_11 versus GBF1_M0268_1.02_CISBP (GBF1:M0268_1.02:CISBP); m=8/39; ncol2=10; w=0; offset=0; strand=D; shift=4; score= 207.6; ----ysACGTGkmm ; cor=0.706; Ncor=0.706; logoDP=5.318; NsEucl=0.891; NSW=0.882; rcor=422; rNcor=56; rlogoDP=175; rNsEucl=159; rNSW=226; rank_mean=207.600; match_rank= a 0 0 0 0 20 6 86 2 6 2 5 0 28 36 c 0 0 0 0 33 32 4 78 14 3 0 5 54 29 g 0 0 0 0 7 40 5 11 76 0 95 61 10 15 t 0 0 0 0 40 22 5 9 4 95 0 34 8 20

BHLH149_MYC2A_B73_1_m1_EEAD0215_EEADannot_rc_shift5 (BHLH149_MYC2A_B73_1_m1:EEAD0215:EEADannot_rc) 0.770 0.577 0.529 0.889 0.890 201 197 345 171 181 219.000
; 1_m11_assembly_11 versus BHLH149_MYC2A_B73_1_m1_EEAD0215_EEADannot_rc (BHLH149_MYC2A_B73_1_m1:EEAD0215:EEADannot_rc); m=9/39; ncol2=11; w=0; offset=1; strand=R; shift=5; score= 219; -----CACRTGtww ; cor=0.770; Ncor=0.577; logoDP=0.529; NsEucl=0.889; NSW=0.890; rcor=201; rNcor=197; rlogoDP=345; rNsEucl=171; rNSW=181; rank_mean=219.000; match_rank= a 0 0 0 0 0 17 99 0 70 0 0 8 27 44 c 0 0 0 0 0 83 0 96 0 0 0 18 4 4 g 0 0 0 0 0 0 0 0 30 0 86 15 10 6 t 0 0 0 0 0 0 1 4 0 100 14 59 59 46

GBF3_M0264_1.02_CISBP_shift4 (GBF3:M0264_1.02:CISBP) 0.702 0.702 3.706 0.892 0.883 444 60 255 150 217 225.200
; 1_m11_assembly_11 versus GBF3_M0264_1.02_CISBP (GBF3:M0264_1.02:CISBP); m=10/39; ncol2=10; w=0; offset=0; strand=D; shift=4; score= 225.2; ----ybAcgTGkmm ; cor=0.702; Ncor=0.702; logoDP=3.706; NsEucl=0.892; NSW=0.883; rcor=444; rNcor=60; rlogoDP=255; rNsEucl=150; rNSW=217; rank_mean=225.200; match_rank= a 0 0 0 0 20 10 73 4 7 5 7 0 33 33 c 0 0 0 0 32 27 9 65 18 4 0 6 41 28 g 0 0 0 0 11 33 10 17 66 1 89 54 14 18 t 0 0 0 0 37 30 8 14 9 90 4 40 12 21

OsEIL3_MA2351.1_JASPAR_shift2 (OsEIL3:MA2351.1:JASPAR) 0.820 0.410 5.760 0.873 0.903 101 434 163 319 128 229.000
; 1_m11_assembly_11 versus OsEIL3_MA2351.1_JASPAR (OsEIL3:MA2351.1:JASPAR); m=11/39; ncol2=8; w=-2; offset=-2; strand=D; shift=2; score= 229; --aGrTACAT---- ; cor=0.820; Ncor=0.410; logoDP=5.760; NsEucl=0.873; NSW=0.903; rcor=101; rNcor=434; rlogoDP=163; rNsEucl=319; rNSW=128; rank_mean=229.000; match_rank= a 0 0 617 20 519 0 779 0 999 48 0 0 0 0 c 0 0 186 20 0 0 0 999 0 48 0 0 0 0 g 0 0 97 937 480 0 0 0 0 48 0 0 0 0 t 0 0 97 20 0 999 220 0 0 855 0 0 0 0

bZIP68_M0255_1.02_CISBP_shift4 (bZIP68:M0255_1.02:CISBP) 0.722 0.650 3.855 0.884 0.878 349 92 249 232 241 232.600
; 1_m11_assembly_11 versus bZIP68_M0255_1.02_CISBP (bZIP68:M0255_1.02:CISBP); m=12/39; ncol2=9; w=0; offset=0; strand=D; shift=4; score= 232.6; ----hsacgTGkm- ; cor=0.722; Ncor=0.650; logoDP=3.855; NsEucl=0.884; NSW=0.878; rcor=349; rNcor=92; rlogoDP=249; rNsEucl=232; rNSW=241; rank_mean=232.600; match_rank= a 0 0 0 0 25 19 62 7 12 3 3 0 29 0 c 0 0 0 0 34 33 13 65 16 6 0 7 48 0 g 0 0 0 0 12 26 14 15 63 0 95 55 13 0 t 0 0 0 0 29 22 11 13 9 91 2 38 10 0

bZIP68_MA0968.1_JASPAR_shift4 (bZIP68:MA0968.1:JASPAR) 0.720 0.648 3.866 0.883 0.877 357 96 247 238 248 237.200
; 1_m11_assembly_11 versus bZIP68_MA0968.1_JASPAR (bZIP68:MA0968.1:JASPAR); m=13/39; ncol2=9; w=0; offset=0; strand=D; shift=4; score= 237.2; ----hsacgTGkm- ; cor=0.720; Ncor=0.648; logoDP=3.866; NsEucl=0.883; NSW=0.877; rcor=357; rNcor=96; rlogoDP=247; rNsEucl=238; rNSW=248; rank_mean=237.200; match_rank= a 0 0 0 0 252 184 621 70 116 28 32 2 289 0 c 0 0 0 0 336 332 131 651 163 58 0 73 476 0 g 0 0 0 0 123 264 137 148 634 0 951 542 134 0 t 0 0 0 0 289 220 111 131 88 914 17 382 101 0

At3g59060_MA0562.1_JASPAR_shift4 (At3g59060:MA0562.1:JASPAR) 0.740 0.592 8.403 0.864 0.851 299 176 70 373 384 260.400
; 1_m11_assembly_11 versus At3g59060_MA0562.1_JASPAR (At3g59060:MA0562.1:JASPAR); m=14/39; ncol2=8; w=0; offset=0; strand=D; shift=4; score= 260.4; ----YCACRTGs-- ; cor=0.740; Ncor=0.592; logoDP=8.403; NsEucl=0.864; NSW=0.851; rcor=299; rNcor=176; rlogoDP=70; rNsEucl=373; rNSW=384; rank_mean=260.400; match_rank= a 0 0 0 0 0 0 286 0 91 0 0 0 0 0 c 0 0 0 0 78 286 0 286 0 0 0 95 0 0 g 0 0 0 0 0 0 0 0 195 0 286 161 0 0 t 0 0 0 0 208 0 0 0 0 286 0 30 0 0

ARF34_EEAD0036_EEADannot_shift4 (ARF34:EEAD0036:EEADannot) 0.808 0.404 5.780 0.850 0.887 126 448 161 426 196 271.400
; 1_m11_assembly_11 versus ARF34_EEAD0036_EEADannot (ARF34:EEAD0036:EEADannot); m=15/39; ncol2=5; w=0; offset=0; strand=D; shift=4; score= 271.4; ----aGACA----- ; cor=0.808; Ncor=0.404; logoDP=5.780; NsEucl=0.850; NSW=0.887; rcor=126; rNcor=448; rlogoDP=161; rNsEucl=426; rNSW=196; rank_mean=271.400; match_rank= a 0 0 0 0 2916 0 4525 0 4525 0 0 0 0 0 c 0 0 0 0 1126 0 0 4525 0 0 0 0 0 0 g 0 0 0 0 328 4525 0 0 0 0 0 0 0 0 t 0 0 0 0 156 0 0 0 0 0 0 0 0 0

EmBP-1_MA0128.1_JASPAR_shift4 (EmBP-1:MA0128.1:JASPAR) 0.730 0.584 8.138 0.862 0.847 333 192 77 385 398 277.000
; 1_m11_assembly_11 versus EmBP-1_MA0128.1_JASPAR (EmBP-1:MA0128.1:JASPAR); m=16/39; ncol2=8; w=0; offset=0; strand=D; shift=4; score= 277; ----WsACGTGG-- ; cor=0.730; Ncor=0.584; logoDP=8.138; NsEucl=0.862; NSW=0.847; rcor=333; rNcor=192; rlogoDP=77; rNsEucl=385; rNSW=398; rank_mean=277.000; match_rank= a 0 0 0 0 9 1 13 0 0 0 0 0 0 0 c 0 0 0 0 0 7 0 12 0 0 1 1 0 0 g 0 0 0 0 0 4 0 0 13 0 12 12 0 0 t 0 0 0 0 4 1 0 1 0 13 0 0 0 0

FUS3_MA0565.3_JASPAR_shift6 (FUS3:MA0565.3:JASPAR) 0.749 0.524 9.479 0.843 0.827 264 259 36 437 441 287.400
; 1_m11_assembly_11 versus FUS3_MA0565.3_JASPAR (FUS3:MA0565.3:JASPAR); m=17/39; ncol2=7; w=0; offset=2; strand=D; shift=6; score= 287.4; ------ACATGCA- ; cor=0.749; Ncor=0.524; logoDP=9.479; NsEucl=0.843; NSW=0.827; rcor=264; rNcor=259; rlogoDP=36; rNsEucl=437; rNSW=441; rank_mean=287.400; match_rank= a 0 0 0 0 0 0 1146 0 1141 3 0 0 1055 0 c 0 0 0 0 0 0 0 1146 2 5 1 1146 18 0 g 0 0 0 0 0 0 0 0 2 1 1145 0 28 0 t 0 0 0 0 0 0 0 0 1 1137 0 0 45 0

LEC1-A_UN0424.2_JASPAR_rc_shift3 (LEC1-A:UN0424.2:JASPAR_rc) 0.791 0.431 0.171 0.866 0.893 155 395 399 361 161 294.200
; 1_m11_assembly_11 versus LEC1-A_UN0424.2_JASPAR_rc (LEC1-A:UN0424.2:JASPAR_rc); m=18/39; ncol2=7; w=-1; offset=-1; strand=R; shift=3; score= 294.2; ---GACACaT---- ; cor=0.791; Ncor=0.431; logoDP=0.171; NsEucl=0.866; NSW=0.893; rcor=155; rNcor=395; rlogoDP=399; rNsEucl=361; rNSW=161; rank_mean=294.200; match_rank= a 0 0 0 209 16937 420 17522 741 12654 699 0 0 0 0 c 0 0 0 141 766 17337 455 16842 821 713 0 0 0 0 g 0 0 0 17815 422 540 357 508 4176 590 0 0 0 0 t 0 0 0 784 824 652 615 858 1298 16947 0 0 0 0

ARF4_EEAD0023_EEADannot_rc_shift4 (ARF4:EEAD0023:EEADannot_rc) 0.805 0.402 1.773 0.852 0.891 130 451 302 420 177 296.000
; 1_m11_assembly_11 versus ARF4_EEAD0023_EEADannot_rc (ARF4:EEAD0023:EEADannot_rc); m=19/39; ncol2=5; w=0; offset=0; strand=R; shift=4; score= 296; ----mGACA----- ; cor=0.805; Ncor=0.402; logoDP=1.773; NsEucl=0.852; NSW=0.891; rcor=130; rNcor=451; rlogoDP=302; rNsEucl=420; rNSW=177; rank_mean=296.000; match_rank= a 0 0 0 0 1840 47 4611 18 4649 0 0 0 0 0 c 0 0 0 0 2298 19 11 4599 0 0 0 0 0 0 g 0 0 0 0 360 4556 9 15 0 0 0 0 0 0 t 0 0 0 0 153 27 19 18 0 0 0 0 0 0

SPT_MA1061.1_JASPAR_rc_shift4 (SPT:MA1061.1:JASPAR_rc) 0.703 0.632 0.519 0.876 0.862 436 120 348 286 343 306.600
; 1_m11_assembly_11 versus SPT_MA1061.1_JASPAR_rc (SPT:MA1061.1:JASPAR_rc); m=20/39; ncol2=9; w=0; offset=0; strand=R; shift=4; score= 306.6; ----gCACGTGsg- ; cor=0.703; Ncor=0.632; logoDP=0.519; NsEucl=0.876; NSW=0.862; rcor=436; rNcor=120; rlogoDP=348; rNsEucl=286; rNSW=343; rank_mean=306.600; match_rank= a 0 0 0 0 242 76 988 0 80 16 39 129 163 0 c 0 0 0 0 237 724 0 912 0 99 0 255 208 0 g 0 0 0 0 301 115 12 0 910 0 961 568 427 0 t 0 0 0 0 221 84 0 88 9 885 0 47 202 0

SPT_M0162_1.02_CISBP_rc_shift4 (SPT:M0162_1.02:CISBP_rc) 0.702 0.632 0.508 0.876 0.863 437 121 350 285 342 307.000
; 1_m11_assembly_11 versus SPT_M0162_1.02_CISBP_rc (SPT:M0162_1.02:CISBP_rc); m=21/39; ncol2=9; w=0; offset=0; strand=R; shift=4; score= 307; ----gCACGTGsg- ; cor=0.702; Ncor=0.632; logoDP=0.508; NsEucl=0.876; NSW=0.863; rcor=437; rNcor=121; rlogoDP=350; rNsEucl=285; rNSW=342; rank_mean=307.000; match_rank= a 0 0 0 0 24 8 99 0 8 2 4 12 16 0 c 0 0 0 0 24 72 0 91 0 10 0 26 21 0 g 0 0 0 0 30 12 1 0 91 0 96 57 43 0 t 0 0 0 0 22 8 0 9 1 88 0 5 20 0

GBF1_MA2389.1_JASPAR_shift6 (GBF1:MA2389.1:JASPAR) 0.740 0.518 5.339 0.855 0.852 300 269 174 418 382 308.600
; 1_m11_assembly_11 versus GBF1_MA2389.1_JASPAR (GBF1:MA2389.1:JASPAR); m=22/39; ncol2=7; w=0; offset=2; strand=D; shift=6; score= 308.6; ------ACGTGkm- ; cor=0.740; Ncor=0.518; logoDP=5.339; NsEucl=0.855; NSW=0.852; rcor=300; rNcor=269; rlogoDP=174; rNsEucl=418; rNSW=382; rank_mean=308.600; match_rank= a 0 0 0 0 0 0 863 16 57 20 45 0 279 0 c 0 0 0 0 0 0 35 783 135 26 2 51 535 0 g 0 0 0 0 0 0 54 111 756 4 954 610 102 0 t 0 0 0 0 0 0 47 89 49 948 0 338 81 0

PIF3_MA0560.2_JASPAR_rc_shift5 (PIF3:MA0560.2:JASPAR_rc) 0.768 0.537 1.927 0.854 0.850 204 242 301 419 387 310.600
; 1_m11_assembly_11 versus PIF3_MA0560.2_JASPAR_rc (PIF3:MA0560.2:JASPAR_rc); m=23/39; ncol2=7; w=0; offset=1; strand=R; shift=5; score= 310.6; -----CACGTGG-- ; cor=0.768; Ncor=0.537; logoDP=1.927; NsEucl=0.854; NSW=0.850; rcor=204; rNcor=242; rlogoDP=301; rNsEucl=419; rNSW=387; rank_mean=310.600; match_rank= a 0 0 0 0 0 0 527 0 118 0 0 15 0 0 c 0 0 0 0 0 527 0 527 0 0 0 94 0 0 g 0 0 0 0 0 0 0 0 409 0 527 399 0 0 t 0 0 0 0 0 0 0 0 0 527 0 19 0 0

BZIP13_B73_1_m1_EEAD0254_EEADannot_shift2 (BZIP13_B73_1_m1:EEAD0254:EEADannot) 0.719 0.479 7.287 0.858 0.838 358 311 116 405 424 322.800
; 1_m11_assembly_11 versus BZIP13_B73_1_m1_EEAD0254_EEADannot (BZIP13_B73_1_m1:EEAD0254:EEADannot); m=24/39; ncol2=10; w=-2; offset=-2; strand=D; shift=2; score= 322.8; --GmTGACGTGG-- ; cor=0.719; Ncor=0.479; logoDP=7.287; NsEucl=0.858; NSW=0.838; rcor=358; rNcor=311; rlogoDP=116; rNsEucl=405; rNSW=424; rank_mean=322.800; match_rank= a 0 0 3 50 1 0 97 0 19 4 3 2 0 0 c 0 0 2 40 4 2 0 90 1 3 2 0 0 0 g 0 0 88 8 2 93 3 2 76 1 95 91 0 0 t 0 0 7 2 93 5 0 8 4 92 0 7 0 0

bZIP2_2_EEAD0097_EEADannot_rc_shift5 (bZIP2_2:EEAD0097:EEADannot_rc) 0.704 0.563 6.153 0.857 0.836 432 214 145 410 429 326.000
; 1_m11_assembly_11 versus bZIP2_2_EEAD0097_EEADannot_rc (bZIP2_2:EEAD0097:EEADannot_rc); m=25/39; ncol2=8; w=0; offset=1; strand=R; shift=5; score= 326; -----sACGTGkm- ; cor=0.704; Ncor=0.563; logoDP=6.153; NsEucl=0.857; NSW=0.836; rcor=432; rNcor=214; rlogoDP=145; rNsEucl=410; rNSW=429; rank_mean=326.000; match_rank= a 0 0 0 0 0 0 338 0 0 0 0 0 174 0 c 0 0 0 0 0 176 0 338 0 0 0 0 110 0 g 0 0 0 0 0 95 0 0 338 0 338 210 0 0 t 0 0 0 0 0 67 0 0 0 338 0 128 54 0

B3_5z00_K_3D-footprint_rc_shift7 (B3:5z00_K:3D-footprint_rc) 0.814 0.407 0.269 0.841 0.873 111 442 374 439 289 331.000
; 1_m11_assembly_11 versus B3_5z00_K_3D-footprint_rc (B3:5z00_K:3D-footprint_rc); m=26/39; ncol2=5; w=0; offset=3; strand=R; shift=7; score= 331; -------cATGc-- ; cor=0.814; Ncor=0.407; logoDP=0.269; NsEucl=0.841; NSW=0.873; rcor=111; rNcor=442; rlogoDP=374; rNsEucl=439; rNSW=289; rank_mean=331.000; match_rank= a 0 0 0 0 0 0 0 13 96 0 0 13 0 0 c 0 0 0 0 0 0 0 57 0 0 0 54 0 0 g 0 0 0 0 0 0 0 13 0 0 96 16 0 0 t 0 0 0 0 0 0 0 13 0 96 0 13 0 0

B3_5yzz_C_3D-footprint_shift7 (B3:5yzz_C:3D-footprint) 0.739 0.443 4.310 0.845 0.855 303 373 220 432 367 339.000
; 1_m11_assembly_11 versus B3_5yzz_C_3D-footprint (B3:5yzz_C:3D-footprint); m=27/39; ncol2=6; w=0; offset=3; strand=D; shift=7; score= 339; -------CATGCa- ; cor=0.739; Ncor=0.443; logoDP=4.310; NsEucl=0.845; NSW=0.855; rcor=303; rNcor=373; rlogoDP=220; rNsEucl=432; rNSW=367; rank_mean=339.000; match_rank= a 0 0 0 0 0 0 0 9 87 7 0 7 52 0 c 0 0 0 0 0 0 0 67 3 7 0 75 14 0 g 0 0 0 0 0 0 0 9 3 7 96 7 16 0 t 0 0 0 0 0 0 0 11 3 75 0 7 14 0

ABF4_MA1659.2_JASPAR_rc_shift5 (ABF4:MA1659.2:JASPAR_rc) 0.747 0.523 0.291 0.852 0.847 270 260 367 422 399 343.600
; 1_m11_assembly_11 versus ABF4_MA1659.2_JASPAR_rc (ABF4:MA1659.2:JASPAR_rc); m=28/39; ncol2=7; w=0; offset=1; strand=R; shift=5; score= 343.6; -----sACGTGG-- ; cor=0.747; Ncor=0.523; logoDP=0.291; NsEucl=0.852; NSW=0.847; rcor=270; rNcor=260; rlogoDP=367; rNsEucl=422; rNSW=399; rank_mean=343.600; match_rank= a 0 0 0 0 0 253 5815 200 161 73 62 155 0 0 c 0 0 0 0 0 1825 52 5470 44 47 86 62 0 0 g 0 0 0 0 0 3358 58 166 5666 20 5763 5169 0 0 t 0 0 0 0 0 610 121 210 175 5906 135 660 0 0

OsbZIP43_UN0825.1_JASPAR_shift5 (OsbZIP43:UN0825.1:JASPAR) 0.702 0.491 7.577 0.837 0.815 441 297 104 446 452 348.000
; 1_m11_assembly_11 versus OsbZIP43_UN0825.1_JASPAR (OsbZIP43:UN0825.1:JASPAR); m=29/39; ncol2=7; w=0; offset=1; strand=D; shift=5; score= 348; -----CACGTGg-- ; cor=0.702; Ncor=0.491; logoDP=7.577; NsEucl=0.837; NSW=0.815; rcor=441; rNcor=297; rlogoDP=104; rNsEucl=446; rNSW=452; rank_mean=348.000; match_rank= a 0 0 0 0 0 25 999 0 0 0 0 114 0 0 c 0 0 0 0 0 726 0 999 0 0 72 42 0 0 g 0 0 0 0 0 222 0 0 999 0 927 642 0 0 t 0 0 0 0 0 25 0 0 0 999 0 200 0 0

LEC2_MA0581.2_JASPAR_shift7 (LEC2:MA0581.2:JASPAR) 0.718 0.431 7.479 0.826 0.818 365 397 109 453 451 355.000
; 1_m11_assembly_11 versus LEC2_MA0581.2_JASPAR (LEC2:MA0581.2:JASPAR); m=30/39; ncol2=6; w=0; offset=3; strand=D; shift=7; score= 355; -------CATGCr- ; cor=0.718; Ncor=0.431; logoDP=7.479; NsEucl=0.826; NSW=0.818; rcor=365; rNcor=397; rlogoDP=109; rNsEucl=453; rNSW=451; rank_mean=355.000; match_rank= a 0 0 0 0 0 0 0 2 487 0 0 0 301 0 c 0 0 0 0 0 0 0 475 0 0 0 487 30 0 g 0 0 0 0 0 0 0 0 0 0 487 0 156 0 t 0 0 0 0 0 0 0 10 0 487 0 0 0 0

BZIP128_OHP1_B73_1_m1_EEAD0250_EEADannot_rc_shift4 (BZIP128_OHP1_B73_1_m1:EEAD0250:EEADannot_rc) 0.704 0.634 0.051 0.861 0.826 429 114 421 388 443 359.000
; 1_m11_assembly_11 versus BZIP128_OHP1_B73_1_m1_EEAD0250_EEADannot_rc (BZIP128_OHP1_B73_1_m1:EEAD0250:EEADannot_rc); m=32/39; ncol2=6; w=0; offset=0; strand=R; shift=4; score= 359; ----TGACrT---- ; cor=0.704; Ncor=0.634; logoDP=0.051; NsEucl=0.861; NSW=0.826; rcor=429; rNcor=114; rlogoDP=421; rNsEucl=388; rNSW=443; rank_mean=359.000; match_rank= a 0 0 0 0 0 0 100 0 42 0 0 0 0 0 c 0 0 0 0 1 0 0 85 1 0 0 0 0 0 g 0 0 0 0 1 98 0 1 57 0 0 0 0 0 t 0 0 0 0 98 2 0 14 0 100 0 0 0 0

MYC3_MA0568.2_JASPAR_shift5 (MYC3:MA0568.2:JASPAR) 0.714 0.428 5.956 0.830 0.827 380 399 153 451 442 365.000
; 1_m11_assembly_11 versus MYC3_MA0568.2_JASPAR (MYC3:MA0568.2:JASPAR); m=33/39; ncol2=13; w=0; offset=1; strand=D; shift=5; score= 365; -----CACGTG--- ; cor=0.714; Ncor=0.428; logoDP=5.956; NsEucl=0.830; NSW=0.827; rcor=380; rNcor=399; rlogoDP=153; rNsEucl=451; rNSW=442; rank_mean=365.000; match_rank= a 0 0 0 0 0 10 97 0 16 1 0 0 0 0 c 0 0 0 0 0 89 0 84 0 2 0 0 0 0 g 0 0 0 0 0 0 2 0 84 0 89 0 0 0 t 0 0 0 0 0 0 1 16 0 97 10 0 0 0

BZIP41_Mo17_1_EEAD0277_EEADannot_rc_shift0 (BZIP41_Mo17_1:EEAD0277:EEADannot_rc) 0.701 0.451 4.817 0.860 0.823 450 360 193 394 448 369.000
; 1_m11_assembly_11 versus BZIP41_Mo17_1_EEAD0277_EEADannot_rc (BZIP41_Mo17_1:EEAD0277:EEADannot_rc); m=34/39; ncol2=6; w=-4; offset=-4; strand=R; shift=0; score= 369; GTGATG-------- ; cor=0.701; Ncor=0.451; logoDP=4.817; NsEucl=0.860; NSW=0.823; rcor=450; rNcor=360; rlogoDP=193; rNsEucl=394; rNSW=448; rank_mean=369.000; match_rank= a 7 8 2 86 0 0 0 0 0 0 0 0 0 0 c 6 7 0 10 1 1 0 0 0 0 0 0 0 0 g 83 2 95 4 0 99 0 0 0 0 0 0 0 0 t 4 83 3 0 99 0 0 0 0 0 0 0 0 0

B3_6j9a_A_3D-footprint_shift7 (B3:6j9a_A:3D-footprint) 0.712 0.427 4.625 0.836 0.838 396 401 199 449 422 373.400
; 1_m11_assembly_11 versus B3_6j9a_A_3D-footprint (B3:6j9a_A:3D-footprint); m=35/39; ncol2=7; w=0; offset=3; strand=D; shift=7; score= 373.4; -------CATGCa- ; cor=0.712; Ncor=0.427; logoDP=4.625; NsEucl=0.836; NSW=0.838; rcor=396; rNcor=401; rlogoDP=199; rNsEucl=449; rNSW=422; rank_mean=373.400; match_rank= a 0 0 0 0 0 0 0 7 85 8 0 2 42 0 c 0 0 0 0 0 0 0 81 3 7 0 88 18 0 g 0 0 0 0 0 0 0 4 3 7 96 2 18 0 t 0 0 0 0 0 0 0 4 5 74 0 4 18 0

SPT_MA1061.2_JASPAR_rc_shift5 (SPT:MA1061.2:JASPAR_rc) 0.717 0.502 0.518 0.846 0.833 372 288 349 430 435 374.800
; 1_m11_assembly_11 versus SPT_MA1061.2_JASPAR_rc (SPT:MA1061.2:JASPAR_rc); m=36/39; ncol2=6; w=0; offset=1; strand=R; shift=5; score= 374.8; -----CACGTG--- ; cor=0.717; Ncor=0.502; logoDP=0.518; NsEucl=0.846; NSW=0.833; rcor=372; rNcor=288; rlogoDP=349; rNsEucl=430; rNSW=435; rank_mean=374.800; match_rank= a 0 0 0 0 0 76 988 0 80 16 39 0 0 0 c 0 0 0 0 0 724 0 912 0 99 0 0 0 0 g 0 0 0 0 0 115 12 0 910 0 961 0 0 0 t 0 0 0 0 0 84 0 88 9 885 0 0 0 0

BEE2_MA0956.2_JASPAR_shift5 (BEE2:MA0956.2:JASPAR) 0.713 0.428 4.098 0.837 0.841 393 400 231 447 415 377.200
; 1_m11_assembly_11 versus BEE2_MA0956.2_JASPAR (BEE2:MA0956.2:JASPAR); m=37/39; ncol2=10; w=0; offset=1; strand=D; shift=5; score= 377.2; -----CACGTG--- ; cor=0.713; Ncor=0.428; logoDP=4.098; NsEucl=0.837; NSW=0.841; rcor=393; rNcor=400; rlogoDP=231; rNsEucl=447; rNSW=415; rank_mean=377.200; match_rank= a 0 0 0 0 0 136 893 23 157 74 104 0 0 0 c 0 0 0 0 0 722 0 820 0 33 38 0 0 0 g 0 0 0 0 0 38 33 0 820 0 722 0 0 0 t 0 0 0 0 0 104 74 157 23 893 136 0 0 0

O2MEME_EEAD0019_EEADannot_rc_shift2 (O2MEME:EEAD0019:EEADannot_rc) 0.713 0.475 0.526 0.857 0.837 391 320 346 406 425 377.600
; 1_m11_assembly_11 versus O2MEME_EEAD0019_EEADannot_rc (O2MEME:EEAD0019:EEADannot_rc); m=38/39; ncol2=7; w=-2; offset=-2; strand=R; shift=2; score= 377.6; --GrTGAyr----- ; cor=0.713; Ncor=0.475; logoDP=0.526; NsEucl=0.857; NSW=0.837; rcor=391; rNcor=320; rlogoDP=346; rNsEucl=406; rNSW=425; rank_mean=377.600; match_rank= a 0 0 0 65 0 0 100 0 49 0 0 0 0 0 c 0 0 18 0 0 0 0 55 0 0 0 0 0 0 g 0 0 82 35 0 100 0 6 51 0 0 0 0 0 t 0 0 0 0 100 0 0 39 0 0 0 0 0 0

Lysine-specific_6jnm_A_3D-footprint_rc_shift5 (Lysine-specific:6jnm_A:3D-footprint_rc) 0.706 0.494 0.123 0.844 0.829 421 293 416 434 437 400.200
; 1_m11_assembly_11 versus Lysine-specific_6jnm_A_3D-footprint_rc (Lysine-specific:6jnm_A:3D-footprint_rc); m=39/39; ncol2=; w=0; offset=1; strand=R; shift=5; score= 400.2; -------------- ; cor=0.706; Ncor=0.494; logoDP=0.123; NsEucl=0.844; NSW=0.829; rcor=421; rNcor=293; rlogoDP=416; rNsEucl=434; rNSW=437; rank_mean=400.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	match_rank	Aligned matrices
1_m11_assembly_11_shift4 (assembly_11)													; 1_m11_assembly_11 (assembly_11); m=0 (reference); ncol1=10; shift=4; ncol=14; ----waACATGGww ; Alignment reference a 0 0 0 0 43 48 132 0 132 0 0 0 48 33 c 0 0 0 0 20 31 0 132 0 0 0 0 19 26 g 0 0 0 0 28 23 0 0 0 0 132 132 25 19 t 0 0 0 0 41 30 0 0 0 132 0 0 40 54
BHLH17_B73_1_m1_EEAD0222_EEADannot_shift4 (BHLH17_B73_1_m1:EEAD0222:EEADannot)	0.835	0.668	8.736	0.893	0.908	80	81	58	142	103	92.800	51	; 1_m11_assembly_11 versus BHLH17_B73_1_m1_EEAD0222_EEADannot (BHLH17_B73_1_m1:EEAD0222:EEADannot); m=1/39; ncol2=8; w=0; offset=0; strand=D; shift=4; score= 92.8; ----gCACATGs-- ; cor=0.835; Ncor=0.668; logoDP=8.736; NsEucl=0.893; NSW=0.908; rcor=80; rNcor=81; rlogoDP=58; rNsEucl=142; rNSW=103; rank_mean=92.800; match_rank=51 a 0 0 0 0 4 2 100 0 76 0 0 5 0 0 c 0 0 0 0 11 98 0 100 0 0 0 25 0 0 g 0 0 0 0 61 0 0 0 24 0 100 50 0 0 t 0 0 0 0 24 0 0 0 0 100 0 20 0 0
BHLH17_Mo17_1_EEAD0223_EEADannot_shift4 (BHLH17_Mo17_1:EEAD0223:EEADannot)	0.834	0.667	8.804	0.892	0.906	82	82	57	154	112	97.400		; 1_m11_assembly_11 versus BHLH17_Mo17_1_EEAD0223_EEADannot (BHLH17_Mo17_1:EEAD0223:EEADannot); m=2/39; ncol2=8; w=0; offset=0; strand=D; shift=4; score= 97.4; ----kCACATGs-- ; cor=0.834; Ncor=0.667; logoDP=8.804; NsEucl=0.892; NSW=0.906; rcor=82; rNcor=82; rlogoDP=57; rNsEucl=154; rNSW=112; rank_mean=97.400; match_rank= a 0 0 0 0 3 0 100 0 76 0 0 3 0 0 c 0 0 0 0 5 100 0 100 0 0 0 25 0 0 g 0 0 0 0 64 0 0 0 24 0 100 54 0 0 t 0 0 0 0 28 0 0 0 0 100 0 18 0 0
ARF4_DYAD0_EEAD0024_EEADannot_shift4 (ARF4_DYAD0:EEAD0024:EEADannot)	0.766	0.766	9.613	0.896	0.892	210	26	30	125	169	112.000		; 1_m11_assembly_11 versus ARF4_DYAD0_EEAD0024_EEADannot (ARF4_DYAD0:EEAD0024:EEADannot); m=3/39; ncol2=10; w=0; offset=0; strand=D; shift=4; score= 112; ----arACATGTyt ; cor=0.766; Ncor=0.766; logoDP=9.613; NsEucl=0.896; NSW=0.892; rcor=210; rNcor=26; rlogoDP=30; rNsEucl=125; rNSW=169; rank_mean=112.000; match_rank= a 0 0 0 0 950 982 2458 0 2458 0 0 0 382 350 c 0 0 0 0 569 359 0 2458 0 0 0 0 735 589 g 0 0 0 0 589 735 0 0 0 0 2458 0 359 569 t 0 0 0 0 350 382 0 0 0 2458 0 2458 982 950
FUS3_MA0565.2_JASPAR_shift4 (FUS3:MA0565.2:JASPAR)	0.750	0.750	9.485	0.889	0.876	260	30	35	176	254	151.000		; 1_m11_assembly_11 versus FUS3_MA0565.2_JASPAR (FUS3:MA0565.2:JASPAR); m=4/39; ncol2=10; w=0; offset=0; strand=D; shift=4; score= 151; ----whACATGCAw ; cor=0.750; Ncor=0.750; logoDP=9.485; NsEucl=0.889; NSW=0.876; rcor=260; rNcor=30; rlogoDP=35; rNsEucl=176; rNSW=254; rank_mean=151.000; match_rank= a 0 0 0 0 469 355 1146 0 1141 3 0 0 1055 446 c 0 0 0 0 152 309 0 1146 2 5 1 1146 18 125 g 0 0 0 0 218 143 0 0 2 1 1145 0 28 98 t 0 0 0 0 307 339 0 0 1 1137 0 0 45 477
PIF3_MA0560.1_JASPAR_rc_shift4 (PIF3:MA0560.1:JASPAR_rc)	0.749	0.749	6.086	0.892	0.883	262	31	149	149	216	161.400		; 1_m11_assembly_11 versus PIF3_MA0560.1_JASPAR_rc (PIF3:MA0560.1:JASPAR_rc); m=5/39; ncol2=10; w=0; offset=0; strand=R; shift=4; score= 161.4; ----yCACGTGGch ; cor=0.749; Ncor=0.749; logoDP=6.086; NsEucl=0.892; NSW=0.883; rcor=262; rNcor=31; rlogoDP=149; rNsEucl=149; rNSW=216; rank_mean=161.400; match_rank= a 0 0 0 0 98 0 527 0 118 0 0 15 116 143 c 0 0 0 0 137 527 0 527 0 0 0 94 222 148 g 0 0 0 0 33 0 0 0 409 0 527 399 131 26 t 0 0 0 0 259 0 0 0 0 527 0 19 58 210
ARF18_DYAD7_EEAD0031_EEADannot_shift4 (ARF18_DYAD7:EEAD0031:EEADannot)	0.763	0.424	5.935	0.902	0.904	218	409	156	87	124	198.800		; 1_m11_assembly_11 versus ARF18_DYAD7_EEAD0031_EEADannot (ARF18_DYAD7:EEAD0031:EEADannot); m=6/39; ncol2=18; w=0; offset=0; strand=D; shift=4; score= 198.8; ----arACAwrrwa ; cor=0.763; Ncor=0.424; logoDP=5.935; NsEucl=0.902; NSW=0.904; rcor=218; rNcor=409; rlogoDP=156; rNsEucl=87; rNSW=124; rank_mean=198.800; match_rank= a 0 0 0 0 367 183 655 0 655 192 169 195 189 303 c 0 0 0 0 152 58 0 655 0 86 117 106 101 108 g 0 0 0 0 100 369 0 0 0 98 292 225 94 137 t 0 0 0 0 36 45 0 0 0 279 77 129 271 107
ABF4_MA1659.1_JASPAR_rc_shift2 (ABF4:MA1659.1:JASPAR_rc)	0.731	0.609	4.929	0.892	0.883	331	145	191	148	215	206.000		; 1_m11_assembly_11 versus ABF4_MA1659.1_JASPAR_rc (ABF4:MA1659.1:JASPAR_rc); m=7/39; ncol2=12; w=-2; offset=-2; strand=R; shift=2; score= 206; --drwsACGTGGma ; cor=0.731; Ncor=0.609; logoDP=4.929; NsEucl=0.892; NSW=0.883; rcor=331; rNcor=145; rlogoDP=191; rNsEucl=148; rNSW=215; rank_mean=206.000; match_rank= a 0 0 1666 1793 1781 253 5815 200 161 73 62 155 1762 2164 c 0 0 849 928 1360 1825 52 5470 44 47 86 62 2625 1105 g 0 0 1901 1865 583 3358 58 166 5666 20 5763 5169 689 1325 t 0 0 1630 1460 2322 610 121 210 175 5906 135 660 970 1452
GBF1_M0268_1.02_CISBP_shift4 (GBF1:M0268_1.02:CISBP)	0.706	0.706	5.318	0.891	0.882	422	56	175	159	226	207.600		; 1_m11_assembly_11 versus GBF1_M0268_1.02_CISBP (GBF1:M0268_1.02:CISBP); m=8/39; ncol2=10; w=0; offset=0; strand=D; shift=4; score= 207.6; ----ysACGTGkmm ; cor=0.706; Ncor=0.706; logoDP=5.318; NsEucl=0.891; NSW=0.882; rcor=422; rNcor=56; rlogoDP=175; rNsEucl=159; rNSW=226; rank_mean=207.600; match_rank= a 0 0 0 0 20 6 86 2 6 2 5 0 28 36 c 0 0 0 0 33 32 4 78 14 3 0 5 54 29 g 0 0 0 0 7 40 5 11 76 0 95 61 10 15 t 0 0 0 0 40 22 5 9 4 95 0 34 8 20
BHLH149_MYC2A_B73_1_m1_EEAD0215_EEADannot_rc_shift5 (BHLH149_MYC2A_B73_1_m1:EEAD0215:EEADannot_rc)	0.770	0.577	0.529	0.889	0.890	201	197	345	171	181	219.000		; 1_m11_assembly_11 versus BHLH149_MYC2A_B73_1_m1_EEAD0215_EEADannot_rc (BHLH149_MYC2A_B73_1_m1:EEAD0215:EEADannot_rc); m=9/39; ncol2=11; w=0; offset=1; strand=R; shift=5; score= 219; -----CACRTGtww ; cor=0.770; Ncor=0.577; logoDP=0.529; NsEucl=0.889; NSW=0.890; rcor=201; rNcor=197; rlogoDP=345; rNsEucl=171; rNSW=181; rank_mean=219.000; match_rank= a 0 0 0 0 0 17 99 0 70 0 0 8 27 44 c 0 0 0 0 0 83 0 96 0 0 0 18 4 4 g 0 0 0 0 0 0 0 0 30 0 86 15 10 6 t 0 0 0 0 0 0 1 4 0 100 14 59 59 46
GBF3_M0264_1.02_CISBP_shift4 (GBF3:M0264_1.02:CISBP)	0.702	0.702	3.706	0.892	0.883	444	60	255	150	217	225.200		; 1_m11_assembly_11 versus GBF3_M0264_1.02_CISBP (GBF3:M0264_1.02:CISBP); m=10/39; ncol2=10; w=0; offset=0; strand=D; shift=4; score= 225.2; ----ybAcgTGkmm ; cor=0.702; Ncor=0.702; logoDP=3.706; NsEucl=0.892; NSW=0.883; rcor=444; rNcor=60; rlogoDP=255; rNsEucl=150; rNSW=217; rank_mean=225.200; match_rank= a 0 0 0 0 20 10 73 4 7 5 7 0 33 33 c 0 0 0 0 32 27 9 65 18 4 0 6 41 28 g 0 0 0 0 11 33 10 17 66 1 89 54 14 18 t 0 0 0 0 37 30 8 14 9 90 4 40 12 21
OsEIL3_MA2351.1_JASPAR_shift2 (OsEIL3:MA2351.1:JASPAR)	0.820	0.410	5.760	0.873	0.903	101	434	163	319	128	229.000		; 1_m11_assembly_11 versus OsEIL3_MA2351.1_JASPAR (OsEIL3:MA2351.1:JASPAR); m=11/39; ncol2=8; w=-2; offset=-2; strand=D; shift=2; score= 229; --aGrTACAT---- ; cor=0.820; Ncor=0.410; logoDP=5.760; NsEucl=0.873; NSW=0.903; rcor=101; rNcor=434; rlogoDP=163; rNsEucl=319; rNSW=128; rank_mean=229.000; match_rank= a 0 0 617 20 519 0 779 0 999 48 0 0 0 0 c 0 0 186 20 0 0 0 999 0 48 0 0 0 0 g 0 0 97 937 480 0 0 0 0 48 0 0 0 0 t 0 0 97 20 0 999 220 0 0 855 0 0 0 0
bZIP68_M0255_1.02_CISBP_shift4 (bZIP68:M0255_1.02:CISBP)	0.722	0.650	3.855	0.884	0.878	349	92	249	232	241	232.600		; 1_m11_assembly_11 versus bZIP68_M0255_1.02_CISBP (bZIP68:M0255_1.02:CISBP); m=12/39; ncol2=9; w=0; offset=0; strand=D; shift=4; score= 232.6; ----hsacgTGkm- ; cor=0.722; Ncor=0.650; logoDP=3.855; NsEucl=0.884; NSW=0.878; rcor=349; rNcor=92; rlogoDP=249; rNsEucl=232; rNSW=241; rank_mean=232.600; match_rank= a 0 0 0 0 25 19 62 7 12 3 3 0 29 0 c 0 0 0 0 34 33 13 65 16 6 0 7 48 0 g 0 0 0 0 12 26 14 15 63 0 95 55 13 0 t 0 0 0 0 29 22 11 13 9 91 2 38 10 0
bZIP68_MA0968.1_JASPAR_shift4 (bZIP68:MA0968.1:JASPAR)	0.720	0.648	3.866	0.883	0.877	357	96	247	238	248	237.200		; 1_m11_assembly_11 versus bZIP68_MA0968.1_JASPAR (bZIP68:MA0968.1:JASPAR); m=13/39; ncol2=9; w=0; offset=0; strand=D; shift=4; score= 237.2; ----hsacgTGkm- ; cor=0.720; Ncor=0.648; logoDP=3.866; NsEucl=0.883; NSW=0.877; rcor=357; rNcor=96; rlogoDP=247; rNsEucl=238; rNSW=248; rank_mean=237.200; match_rank= a 0 0 0 0 252 184 621 70 116 28 32 2 289 0 c 0 0 0 0 336 332 131 651 163 58 0 73 476 0 g 0 0 0 0 123 264 137 148 634 0 951 542 134 0 t 0 0 0 0 289 220 111 131 88 914 17 382 101 0
At3g59060_MA0562.1_JASPAR_shift4 (At3g59060:MA0562.1:JASPAR)	0.740	0.592	8.403	0.864	0.851	299	176	70	373	384	260.400		; 1_m11_assembly_11 versus At3g59060_MA0562.1_JASPAR (At3g59060:MA0562.1:JASPAR); m=14/39; ncol2=8; w=0; offset=0; strand=D; shift=4; score= 260.4; ----YCACRTGs-- ; cor=0.740; Ncor=0.592; logoDP=8.403; NsEucl=0.864; NSW=0.851; rcor=299; rNcor=176; rlogoDP=70; rNsEucl=373; rNSW=384; rank_mean=260.400; match_rank= a 0 0 0 0 0 0 286 0 91 0 0 0 0 0 c 0 0 0 0 78 286 0 286 0 0 0 95 0 0 g 0 0 0 0 0 0 0 0 195 0 286 161 0 0 t 0 0 0 0 208 0 0 0 0 286 0 30 0 0
ARF34_EEAD0036_EEADannot_shift4 (ARF34:EEAD0036:EEADannot)	0.808	0.404	5.780	0.850	0.887	126	448	161	426	196	271.400		; 1_m11_assembly_11 versus ARF34_EEAD0036_EEADannot (ARF34:EEAD0036:EEADannot); m=15/39; ncol2=5; w=0; offset=0; strand=D; shift=4; score= 271.4; ----aGACA----- ; cor=0.808; Ncor=0.404; logoDP=5.780; NsEucl=0.850; NSW=0.887; rcor=126; rNcor=448; rlogoDP=161; rNsEucl=426; rNSW=196; rank_mean=271.400; match_rank= a 0 0 0 0 2916 0 4525 0 4525 0 0 0 0 0 c 0 0 0 0 1126 0 0 4525 0 0 0 0 0 0 g 0 0 0 0 328 4525 0 0 0 0 0 0 0 0 t 0 0 0 0 156 0 0 0 0 0 0 0 0 0
EmBP-1_MA0128.1_JASPAR_shift4 (EmBP-1:MA0128.1:JASPAR)	0.730	0.584	8.138	0.862	0.847	333	192	77	385	398	277.000		; 1_m11_assembly_11 versus EmBP-1_MA0128.1_JASPAR (EmBP-1:MA0128.1:JASPAR); m=16/39; ncol2=8; w=0; offset=0; strand=D; shift=4; score= 277; ----WsACGTGG-- ; cor=0.730; Ncor=0.584; logoDP=8.138; NsEucl=0.862; NSW=0.847; rcor=333; rNcor=192; rlogoDP=77; rNsEucl=385; rNSW=398; rank_mean=277.000; match_rank= a 0 0 0 0 9 1 13 0 0 0 0 0 0 0 c 0 0 0 0 0 7 0 12 0 0 1 1 0 0 g 0 0 0 0 0 4 0 0 13 0 12 12 0 0 t 0 0 0 0 4 1 0 1 0 13 0 0 0 0
FUS3_MA0565.3_JASPAR_shift6 (FUS3:MA0565.3:JASPAR)	0.749	0.524	9.479	0.843	0.827	264	259	36	437	441	287.400		; 1_m11_assembly_11 versus FUS3_MA0565.3_JASPAR (FUS3:MA0565.3:JASPAR); m=17/39; ncol2=7; w=0; offset=2; strand=D; shift=6; score= 287.4; ------ACATGCA- ; cor=0.749; Ncor=0.524; logoDP=9.479; NsEucl=0.843; NSW=0.827; rcor=264; rNcor=259; rlogoDP=36; rNsEucl=437; rNSW=441; rank_mean=287.400; match_rank= a 0 0 0 0 0 0 1146 0 1141 3 0 0 1055 0 c 0 0 0 0 0 0 0 1146 2 5 1 1146 18 0 g 0 0 0 0 0 0 0 0 2 1 1145 0 28 0 t 0 0 0 0 0 0 0 0 1 1137 0 0 45 0
LEC1-A_UN0424.2_JASPAR_rc_shift3 (LEC1-A:UN0424.2:JASPAR_rc)	0.791	0.431	0.171	0.866	0.893	155	395	399	361	161	294.200		; 1_m11_assembly_11 versus LEC1-A_UN0424.2_JASPAR_rc (LEC1-A:UN0424.2:JASPAR_rc); m=18/39; ncol2=7; w=-1; offset=-1; strand=R; shift=3; score= 294.2; ---GACACaT---- ; cor=0.791; Ncor=0.431; logoDP=0.171; NsEucl=0.866; NSW=0.893; rcor=155; rNcor=395; rlogoDP=399; rNsEucl=361; rNSW=161; rank_mean=294.200; match_rank= a 0 0 0 209 16937 420 17522 741 12654 699 0 0 0 0 c 0 0 0 141 766 17337 455 16842 821 713 0 0 0 0 g 0 0 0 17815 422 540 357 508 4176 590 0 0 0 0 t 0 0 0 784 824 652 615 858 1298 16947 0 0 0 0
ARF4_EEAD0023_EEADannot_rc_shift4 (ARF4:EEAD0023:EEADannot_rc)	0.805	0.402	1.773	0.852	0.891	130	451	302	420	177	296.000		; 1_m11_assembly_11 versus ARF4_EEAD0023_EEADannot_rc (ARF4:EEAD0023:EEADannot_rc); m=19/39; ncol2=5; w=0; offset=0; strand=R; shift=4; score= 296; ----mGACA----- ; cor=0.805; Ncor=0.402; logoDP=1.773; NsEucl=0.852; NSW=0.891; rcor=130; rNcor=451; rlogoDP=302; rNsEucl=420; rNSW=177; rank_mean=296.000; match_rank= a 0 0 0 0 1840 47 4611 18 4649 0 0 0 0 0 c 0 0 0 0 2298 19 11 4599 0 0 0 0 0 0 g 0 0 0 0 360 4556 9 15 0 0 0 0 0 0 t 0 0 0 0 153 27 19 18 0 0 0 0 0 0
SPT_MA1061.1_JASPAR_rc_shift4 (SPT:MA1061.1:JASPAR_rc)	0.703	0.632	0.519	0.876	0.862	436	120	348	286	343	306.600		; 1_m11_assembly_11 versus SPT_MA1061.1_JASPAR_rc (SPT:MA1061.1:JASPAR_rc); m=20/39; ncol2=9; w=0; offset=0; strand=R; shift=4; score= 306.6; ----gCACGTGsg- ; cor=0.703; Ncor=0.632; logoDP=0.519; NsEucl=0.876; NSW=0.862; rcor=436; rNcor=120; rlogoDP=348; rNsEucl=286; rNSW=343; rank_mean=306.600; match_rank= a 0 0 0 0 242 76 988 0 80 16 39 129 163 0 c 0 0 0 0 237 724 0 912 0 99 0 255 208 0 g 0 0 0 0 301 115 12 0 910 0 961 568 427 0 t 0 0 0 0 221 84 0 88 9 885 0 47 202 0
SPT_M0162_1.02_CISBP_rc_shift4 (SPT:M0162_1.02:CISBP_rc)	0.702	0.632	0.508	0.876	0.863	437	121	350	285	342	307.000		; 1_m11_assembly_11 versus SPT_M0162_1.02_CISBP_rc (SPT:M0162_1.02:CISBP_rc); m=21/39; ncol2=9; w=0; offset=0; strand=R; shift=4; score= 307; ----gCACGTGsg- ; cor=0.702; Ncor=0.632; logoDP=0.508; NsEucl=0.876; NSW=0.863; rcor=437; rNcor=121; rlogoDP=350; rNsEucl=285; rNSW=342; rank_mean=307.000; match_rank= a 0 0 0 0 24 8 99 0 8 2 4 12 16 0 c 0 0 0 0 24 72 0 91 0 10 0 26 21 0 g 0 0 0 0 30 12 1 0 91 0 96 57 43 0 t 0 0 0 0 22 8 0 9 1 88 0 5 20 0
GBF1_MA2389.1_JASPAR_shift6 (GBF1:MA2389.1:JASPAR)	0.740	0.518	5.339	0.855	0.852	300	269	174	418	382	308.600		; 1_m11_assembly_11 versus GBF1_MA2389.1_JASPAR (GBF1:MA2389.1:JASPAR); m=22/39; ncol2=7; w=0; offset=2; strand=D; shift=6; score= 308.6; ------ACGTGkm- ; cor=0.740; Ncor=0.518; logoDP=5.339; NsEucl=0.855; NSW=0.852; rcor=300; rNcor=269; rlogoDP=174; rNsEucl=418; rNSW=382; rank_mean=308.600; match_rank= a 0 0 0 0 0 0 863 16 57 20 45 0 279 0 c 0 0 0 0 0 0 35 783 135 26 2 51 535 0 g 0 0 0 0 0 0 54 111 756 4 954 610 102 0 t 0 0 0 0 0 0 47 89 49 948 0 338 81 0
PIF3_MA0560.2_JASPAR_rc_shift5 (PIF3:MA0560.2:JASPAR_rc)	0.768	0.537	1.927	0.854	0.850	204	242	301	419	387	310.600		; 1_m11_assembly_11 versus PIF3_MA0560.2_JASPAR_rc (PIF3:MA0560.2:JASPAR_rc); m=23/39; ncol2=7; w=0; offset=1; strand=R; shift=5; score= 310.6; -----CACGTGG-- ; cor=0.768; Ncor=0.537; logoDP=1.927; NsEucl=0.854; NSW=0.850; rcor=204; rNcor=242; rlogoDP=301; rNsEucl=419; rNSW=387; rank_mean=310.600; match_rank= a 0 0 0 0 0 0 527 0 118 0 0 15 0 0 c 0 0 0 0 0 527 0 527 0 0 0 94 0 0 g 0 0 0 0 0 0 0 0 409 0 527 399 0 0 t 0 0 0 0 0 0 0 0 0 527 0 19 0 0
BZIP13_B73_1_m1_EEAD0254_EEADannot_shift2 (BZIP13_B73_1_m1:EEAD0254:EEADannot)	0.719	0.479	7.287	0.858	0.838	358	311	116	405	424	322.800		; 1_m11_assembly_11 versus BZIP13_B73_1_m1_EEAD0254_EEADannot (BZIP13_B73_1_m1:EEAD0254:EEADannot); m=24/39; ncol2=10; w=-2; offset=-2; strand=D; shift=2; score= 322.8; --GmTGACGTGG-- ; cor=0.719; Ncor=0.479; logoDP=7.287; NsEucl=0.858; NSW=0.838; rcor=358; rNcor=311; rlogoDP=116; rNsEucl=405; rNSW=424; rank_mean=322.800; match_rank= a 0 0 3 50 1 0 97 0 19 4 3 2 0 0 c 0 0 2 40 4 2 0 90 1 3 2 0 0 0 g 0 0 88 8 2 93 3 2 76 1 95 91 0 0 t 0 0 7 2 93 5 0 8 4 92 0 7 0 0
bZIP2_2_EEAD0097_EEADannot_rc_shift5 (bZIP2_2:EEAD0097:EEADannot_rc)	0.704	0.563	6.153	0.857	0.836	432	214	145	410	429	326.000		; 1_m11_assembly_11 versus bZIP2_2_EEAD0097_EEADannot_rc (bZIP2_2:EEAD0097:EEADannot_rc); m=25/39; ncol2=8; w=0; offset=1; strand=R; shift=5; score= 326; -----sACGTGkm- ; cor=0.704; Ncor=0.563; logoDP=6.153; NsEucl=0.857; NSW=0.836; rcor=432; rNcor=214; rlogoDP=145; rNsEucl=410; rNSW=429; rank_mean=326.000; match_rank= a 0 0 0 0 0 0 338 0 0 0 0 0 174 0 c 0 0 0 0 0 176 0 338 0 0 0 0 110 0 g 0 0 0 0 0 95 0 0 338 0 338 210 0 0 t 0 0 0 0 0 67 0 0 0 338 0 128 54 0
B3_5z00_K_3D-footprint_rc_shift7 (B3:5z00_K:3D-footprint_rc)	0.814	0.407	0.269	0.841	0.873	111	442	374	439	289	331.000		; 1_m11_assembly_11 versus B3_5z00_K_3D-footprint_rc (B3:5z00_K:3D-footprint_rc); m=26/39; ncol2=5; w=0; offset=3; strand=R; shift=7; score= 331; -------cATGc-- ; cor=0.814; Ncor=0.407; logoDP=0.269; NsEucl=0.841; NSW=0.873; rcor=111; rNcor=442; rlogoDP=374; rNsEucl=439; rNSW=289; rank_mean=331.000; match_rank= a 0 0 0 0 0 0 0 13 96 0 0 13 0 0 c 0 0 0 0 0 0 0 57 0 0 0 54 0 0 g 0 0 0 0 0 0 0 13 0 0 96 16 0 0 t 0 0 0 0 0 0 0 13 0 96 0 13 0 0
B3_5yzz_C_3D-footprint_shift7 (B3:5yzz_C:3D-footprint)	0.739	0.443	4.310	0.845	0.855	303	373	220	432	367	339.000		; 1_m11_assembly_11 versus B3_5yzz_C_3D-footprint (B3:5yzz_C:3D-footprint); m=27/39; ncol2=6; w=0; offset=3; strand=D; shift=7; score= 339; -------CATGCa- ; cor=0.739; Ncor=0.443; logoDP=4.310; NsEucl=0.845; NSW=0.855; rcor=303; rNcor=373; rlogoDP=220; rNsEucl=432; rNSW=367; rank_mean=339.000; match_rank= a 0 0 0 0 0 0 0 9 87 7 0 7 52 0 c 0 0 0 0 0 0 0 67 3 7 0 75 14 0 g 0 0 0 0 0 0 0 9 3 7 96 7 16 0 t 0 0 0 0 0 0 0 11 3 75 0 7 14 0
ABF4_MA1659.2_JASPAR_rc_shift5 (ABF4:MA1659.2:JASPAR_rc)	0.747	0.523	0.291	0.852	0.847	270	260	367	422	399	343.600		; 1_m11_assembly_11 versus ABF4_MA1659.2_JASPAR_rc (ABF4:MA1659.2:JASPAR_rc); m=28/39; ncol2=7; w=0; offset=1; strand=R; shift=5; score= 343.6; -----sACGTGG-- ; cor=0.747; Ncor=0.523; logoDP=0.291; NsEucl=0.852; NSW=0.847; rcor=270; rNcor=260; rlogoDP=367; rNsEucl=422; rNSW=399; rank_mean=343.600; match_rank= a 0 0 0 0 0 253 5815 200 161 73 62 155 0 0 c 0 0 0 0 0 1825 52 5470 44 47 86 62 0 0 g 0 0 0 0 0 3358 58 166 5666 20 5763 5169 0 0 t 0 0 0 0 0 610 121 210 175 5906 135 660 0 0
OsbZIP43_UN0825.1_JASPAR_shift5 (OsbZIP43:UN0825.1:JASPAR)	0.702	0.491	7.577	0.837	0.815	441	297	104	446	452	348.000		; 1_m11_assembly_11 versus OsbZIP43_UN0825.1_JASPAR (OsbZIP43:UN0825.1:JASPAR); m=29/39; ncol2=7; w=0; offset=1; strand=D; shift=5; score= 348; -----CACGTGg-- ; cor=0.702; Ncor=0.491; logoDP=7.577; NsEucl=0.837; NSW=0.815; rcor=441; rNcor=297; rlogoDP=104; rNsEucl=446; rNSW=452; rank_mean=348.000; match_rank= a 0 0 0 0 0 25 999 0 0 0 0 114 0 0 c 0 0 0 0 0 726 0 999 0 0 72 42 0 0 g 0 0 0 0 0 222 0 0 999 0 927 642 0 0 t 0 0 0 0 0 25 0 0 0 999 0 200 0 0
LEC2_MA0581.2_JASPAR_shift7 (LEC2:MA0581.2:JASPAR)	0.718	0.431	7.479	0.826	0.818	365	397	109	453	451	355.000		; 1_m11_assembly_11 versus LEC2_MA0581.2_JASPAR (LEC2:MA0581.2:JASPAR); m=30/39; ncol2=6; w=0; offset=3; strand=D; shift=7; score= 355; -------CATGCr- ; cor=0.718; Ncor=0.431; logoDP=7.479; NsEucl=0.826; NSW=0.818; rcor=365; rNcor=397; rlogoDP=109; rNsEucl=453; rNSW=451; rank_mean=355.000; match_rank= a 0 0 0 0 0 0 0 2 487 0 0 0 301 0 c 0 0 0 0 0 0 0 475 0 0 0 487 30 0 g 0 0 0 0 0 0 0 0 0 0 487 0 156 0 t 0 0 0 0 0 0 0 10 0 487 0 0 0 0
BZIP128_OHP1_B73_1_m1_EEAD0250_EEADannot_rc_shift4 (BZIP128_OHP1_B73_1_m1:EEAD0250:EEADannot_rc)	0.704	0.634	0.051	0.861	0.826	429	114	421	388	443	359.000		; 1_m11_assembly_11 versus BZIP128_OHP1_B73_1_m1_EEAD0250_EEADannot_rc (BZIP128_OHP1_B73_1_m1:EEAD0250:EEADannot_rc); m=32/39; ncol2=6; w=0; offset=0; strand=R; shift=4; score= 359; ----TGACrT---- ; cor=0.704; Ncor=0.634; logoDP=0.051; NsEucl=0.861; NSW=0.826; rcor=429; rNcor=114; rlogoDP=421; rNsEucl=388; rNSW=443; rank_mean=359.000; match_rank= a 0 0 0 0 0 0 100 0 42 0 0 0 0 0 c 0 0 0 0 1 0 0 85 1 0 0 0 0 0 g 0 0 0 0 1 98 0 1 57 0 0 0 0 0 t 0 0 0 0 98 2 0 14 0 100 0 0 0 0
MYC3_MA0568.2_JASPAR_shift5 (MYC3:MA0568.2:JASPAR)	0.714	0.428	5.956	0.830	0.827	380	399	153	451	442	365.000		; 1_m11_assembly_11 versus MYC3_MA0568.2_JASPAR (MYC3:MA0568.2:JASPAR); m=33/39; ncol2=13; w=0; offset=1; strand=D; shift=5; score= 365; -----CACGTG--- ; cor=0.714; Ncor=0.428; logoDP=5.956; NsEucl=0.830; NSW=0.827; rcor=380; rNcor=399; rlogoDP=153; rNsEucl=451; rNSW=442; rank_mean=365.000; match_rank= a 0 0 0 0 0 10 97 0 16 1 0 0 0 0 c 0 0 0 0 0 89 0 84 0 2 0 0 0 0 g 0 0 0 0 0 0 2 0 84 0 89 0 0 0 t 0 0 0 0 0 0 1 16 0 97 10 0 0 0
BZIP41_Mo17_1_EEAD0277_EEADannot_rc_shift0 (BZIP41_Mo17_1:EEAD0277:EEADannot_rc)	0.701	0.451	4.817	0.860	0.823	450	360	193	394	448	369.000		; 1_m11_assembly_11 versus BZIP41_Mo17_1_EEAD0277_EEADannot_rc (BZIP41_Mo17_1:EEAD0277:EEADannot_rc); m=34/39; ncol2=6; w=-4; offset=-4; strand=R; shift=0; score= 369; GTGATG-------- ; cor=0.701; Ncor=0.451; logoDP=4.817; NsEucl=0.860; NSW=0.823; rcor=450; rNcor=360; rlogoDP=193; rNsEucl=394; rNSW=448; rank_mean=369.000; match_rank= a 7 8 2 86 0 0 0 0 0 0 0 0 0 0 c 6 7 0 10 1 1 0 0 0 0 0 0 0 0 g 83 2 95 4 0 99 0 0 0 0 0 0 0 0 t 4 83 3 0 99 0 0 0 0 0 0 0 0 0
B3_6j9a_A_3D-footprint_shift7 (B3:6j9a_A:3D-footprint)	0.712	0.427	4.625	0.836	0.838	396	401	199	449	422	373.400		; 1_m11_assembly_11 versus B3_6j9a_A_3D-footprint (B3:6j9a_A:3D-footprint); m=35/39; ncol2=7; w=0; offset=3; strand=D; shift=7; score= 373.4; -------CATGCa- ; cor=0.712; Ncor=0.427; logoDP=4.625; NsEucl=0.836; NSW=0.838; rcor=396; rNcor=401; rlogoDP=199; rNsEucl=449; rNSW=422; rank_mean=373.400; match_rank= a 0 0 0 0 0 0 0 7 85 8 0 2 42 0 c 0 0 0 0 0 0 0 81 3 7 0 88 18 0 g 0 0 0 0 0 0 0 4 3 7 96 2 18 0 t 0 0 0 0 0 0 0 4 5 74 0 4 18 0
SPT_MA1061.2_JASPAR_rc_shift5 (SPT:MA1061.2:JASPAR_rc)	0.717	0.502	0.518	0.846	0.833	372	288	349	430	435	374.800		; 1_m11_assembly_11 versus SPT_MA1061.2_JASPAR_rc (SPT:MA1061.2:JASPAR_rc); m=36/39; ncol2=6; w=0; offset=1; strand=R; shift=5; score= 374.8; -----CACGTG--- ; cor=0.717; Ncor=0.502; logoDP=0.518; NsEucl=0.846; NSW=0.833; rcor=372; rNcor=288; rlogoDP=349; rNsEucl=430; rNSW=435; rank_mean=374.800; match_rank= a 0 0 0 0 0 76 988 0 80 16 39 0 0 0 c 0 0 0 0 0 724 0 912 0 99 0 0 0 0 g 0 0 0 0 0 115 12 0 910 0 961 0 0 0 t 0 0 0 0 0 84 0 88 9 885 0 0 0 0
BEE2_MA0956.2_JASPAR_shift5 (BEE2:MA0956.2:JASPAR)	0.713	0.428	4.098	0.837	0.841	393	400	231	447	415	377.200		; 1_m11_assembly_11 versus BEE2_MA0956.2_JASPAR (BEE2:MA0956.2:JASPAR); m=37/39; ncol2=10; w=0; offset=1; strand=D; shift=5; score= 377.2; -----CACGTG--- ; cor=0.713; Ncor=0.428; logoDP=4.098; NsEucl=0.837; NSW=0.841; rcor=393; rNcor=400; rlogoDP=231; rNsEucl=447; rNSW=415; rank_mean=377.200; match_rank= a 0 0 0 0 0 136 893 23 157 74 104 0 0 0 c 0 0 0 0 0 722 0 820 0 33 38 0 0 0 g 0 0 0 0 0 38 33 0 820 0 722 0 0 0 t 0 0 0 0 0 104 74 157 23 893 136 0 0 0
O2MEME_EEAD0019_EEADannot_rc_shift2 (O2MEME:EEAD0019:EEADannot_rc)	0.713	0.475	0.526	0.857	0.837	391	320	346	406	425	377.600		; 1_m11_assembly_11 versus O2MEME_EEAD0019_EEADannot_rc (O2MEME:EEAD0019:EEADannot_rc); m=38/39; ncol2=7; w=-2; offset=-2; strand=R; shift=2; score= 377.6; --GrTGAyr----- ; cor=0.713; Ncor=0.475; logoDP=0.526; NsEucl=0.857; NSW=0.837; rcor=391; rNcor=320; rlogoDP=346; rNsEucl=406; rNSW=425; rank_mean=377.600; match_rank= a 0 0 0 65 0 0 100 0 49 0 0 0 0 0 c 0 0 18 0 0 0 0 55 0 0 0 0 0 0 g 0 0 82 35 0 100 0 6 51 0 0 0 0 0 t 0 0 0 0 100 0 0 39 0 0 0 0 0 0
Lysine-specific_6jnm_A_3D-footprint_rc_shift5 (Lysine-specific:6jnm_A:3D-footprint_rc)	0.706	0.494	0.123	0.844	0.829	421	293	416	434	437	400.200		; 1_m11_assembly_11 versus Lysine-specific_6jnm_A_3D-footprint_rc (Lysine-specific:6jnm_A:3D-footprint_rc); m=39/39; ncol2=; w=0; offset=1; strand=R; shift=5; score= 400.2; -------------- ; cor=0.706; Ncor=0.494; logoDP=0.123; NsEucl=0.844; NSW=0.829; rcor=421; rNcor=293; rlogoDP=416; rNsEucl=434; rNSW=437; rank_mean=400.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0

One-to-n matrix alignment; reference matrix: 1_m1_assembly_1_shift0 ; 22 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
1_m1_assembly_1_shift0 (assembly_1)
; 1_m1_assembly_1 (assembly_1); m=0 (reference); ncol1=14; shift=0; ncol=14; wwTTTATATAAAww ; Alignment reference a 831 1071 253 578 200 2260 236 2355 300 2379 1928 2329 1000 1222 c 381 346 101 122 109 97 95 86 115 84 144 89 355 338 g 338 355 89 144 84 115 86 95 97 109 122 101 346 381 t 1222 1000 2329 1928 2379 300 2355 236 2260 200 578 253 1071 831

ZFHD10-3_EEAD0065_EEADannot_shift0 (ZFHD10-3:EEAD0065:EEADannot) 0.857 0.612 4.763 0.912 0.923 59 143 194 41 59 99.200
; 1_m1_assembly_1 versus ZFHD10-3_EEAD0065_EEADannot (ZFHD10-3:EEAD0065:EEADannot); m=1/21; ncol2=10; w=0; offset=0; strand=D; shift=0; score= 99.2; TATATATATA---- ; cor=0.857; Ncor=0.612; logoDP=4.763; NsEucl=0.912; NSW=0.923; rcor=59; rNcor=143; rlogoDP=194; rNsEucl=41; rNSW=59; rank_mean=99.200; match_rank= a 10 90 10 90 10 90 10 90 10 90 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 90 10 90 10 90 10 90 10 90 10 0 0 0 0

TRANSCRIPTION_1qn4_B_3D-footprint_shift0 (TRANSCRIPTION:1qn4_B:3D-footprint) 0.880 0.503 4.391 0.906 0.929 40 285 211 68 50 130.800
; 1_m1_assembly_1 versus TRANSCRIPTION_1qn4_B_3D-footprint (TRANSCRIPTION:1qn4_B:3D-footprint); m=2/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 130.8; aTtTTATA------ ; cor=0.880; Ncor=0.503; logoDP=4.391; NsEucl=0.906; NSW=0.929; rcor=40; rNcor=285; rlogoDP=211; rNsEucl=68; rNSW=50; rank_mean=130.800; match_rank= a 54 0 16 0 0 96 0 96 0 0 0 0 0 0 c 16 0 13 0 0 0 0 0 0 0 0 0 0 0 g 13 0 13 0 0 0 0 0 0 0 0 0 0 0 t 13 96 54 96 96 0 96 0 0 0 0 0 0 0

AT4G17950_M0119_1.02_CISBP_shift4 (AT4G17950:M0119_1.02:CISBP) 0.806 0.576 2.977 0.918 0.933 127 200 279 30 44 136.000
; 1_m1_assembly_1 versus AT4G17950_M0119_1.02_CISBP (AT4G17950:M0119_1.02:CISBP); m=3/21; ncol2=10; w=0; offset=4; strand=D; shift=4; score= 136; ----dAWWTAWWta ; cor=0.806; Ncor=0.576; logoDP=2.977; NsEucl=0.918; NSW=0.933; rcor=127; rNcor=200; rlogoDP=279; rNsEucl=30; rNSW=44; rank_mean=136.000; match_rank= a 0 0 0 0 25 83 29 70 0 80 69 30 21 32 c 0 0 0 0 15 2 0 0 0 0 0 0 10 23 g 0 0 0 0 25 2 0 0 0 0 0 0 10 22 t 0 0 0 0 35 13 71 30 100 20 31 70 59 23

TATA-box-binding_6ueo_G_3D-footprint_rc_shift0 (TATA-box-binding:6ueo_G:3D-footprint_rc) 0.894 0.511 1.594 0.913 0.939 27 276 309 38 32 136.400
; 1_m1_assembly_1 versus TATA-box-binding_6ueo_G_3D-footprint_rc (TATA-box-binding:6ueo_G:3D-footprint_rc); m=4/21; ncol2=8; w=0; offset=0; strand=R; shift=0; score= 136.4; CTTTTATA------ ; cor=0.894; Ncor=0.511; logoDP=1.594; NsEucl=0.913; NSW=0.939; rcor=27; rNcor=276; rlogoDP=309; rNsEucl=38; rNSW=32; rank_mean=136.400; match_rank= a 9 9 9 0 0 96 0 96 0 0 0 0 0 0 c 67 11 9 0 0 0 0 0 0 0 0 0 0 0 g 9 9 11 0 0 0 0 0 0 0 0 0 0 0 t 11 67 67 96 96 0 96 0 0 0 0 0 0 0

TATA-box-binding_6njq_A_3D-footprint_shift1 (TATA-box-binding:6njq_A:3D-footprint) 0.892 0.446 3.818 0.910 0.944 29 370 252 48 25 144.800
; 1_m1_assembly_1 versus TATA-box-binding_6njq_A_3D-footprint (TATA-box-binding:6njq_A:3D-footprint); m=5/21; ncol2=7; w=0; offset=1; strand=D; shift=1; score= 144.8; -GTTTATA------ ; cor=0.892; Ncor=0.446; logoDP=3.818; NsEucl=0.910; NSW=0.944; rcor=29; rNcor=370; rlogoDP=252; rNsEucl=48; rNSW=25; rank_mean=144.800; match_rank= a 0 9 11 0 0 67 0 96 0 0 0 0 0 0 c 0 9 9 0 0 9 0 0 0 0 0 0 0 0 g 0 69 9 0 0 11 0 0 0 0 0 0 0 0 t 0 9 67 96 96 9 96 0 0 0 0 0 0 0

AHL13_MA2374.1_JASPAR_rc_shift1 (AHL13:MA2374.1:JASPAR_rc) 0.847 0.484 2.503 0.914 0.940 68 306 291 37 31 146.600
; 1_m1_assembly_1 versus AHL13_MA2374.1_JASPAR_rc (AHL13:MA2374.1:JASPAR_rc); m=6/21; ncol2=8; w=0; offset=1; strand=R; shift=1; score= 146.6; -aWWTAWWT----- ; cor=0.847; Ncor=0.484; logoDP=2.503; NsEucl=0.914; NSW=0.940; rcor=68; rNcor=306; rlogoDP=291; rNsEucl=37; rNSW=31; rank_mean=146.600; match_rank= a 0 592 701 312 197 999 297 706 119 0 0 0 0 0 c 0 97 0 0 0 0 0 0 24 0 0 0 0 0 g 0 97 0 0 0 0 0 0 24 0 0 0 0 0 t 0 213 297 686 802 0 701 292 831 0 0 0 0 0

TRANSCRIPTION_1qne_B_3D-footprint_shift0 (TRANSCRIPTION:1qne_B:3D-footprint) 0.859 0.491 4.390 0.899 0.919 57 300 213 106 69 149.000
; 1_m1_assembly_1 versus TRANSCRIPTION_1qne_B_3D-footprint (TRANSCRIPTION:1qne_B:3D-footprint); m=7/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 149; cTtTTATA------ ; cor=0.859; Ncor=0.491; logoDP=4.390; NsEucl=0.899; NSW=0.919; rcor=57; rNcor=300; rlogoDP=213; rNsEucl=106; rNSW=69; rank_mean=149.000; match_rank= a 13 0 16 0 0 96 0 96 0 0 0 0 0 0 c 57 0 13 0 0 0 0 0 0 0 0 0 0 0 g 13 0 13 0 0 0 0 0 0 0 0 0 0 0 t 13 96 54 96 96 0 96 0 0 0 0 0 0 0

TRANSCRIPTION_1qn7_B_3D-footprint_rc_shift4 (TRANSCRIPTION:1qn7_B:3D-footprint_rc) 0.848 0.484 3.529 0.900 0.919 67 305 261 100 66 159.800
; 1_m1_assembly_1 versus TRANSCRIPTION_1qn7_B_3D-footprint_rc (TRANSCRIPTION:1qn7_B:3D-footprint_rc); m=8/21; ncol2=8; w=0; offset=4; strand=R; shift=4; score= 159.8; ----TATATaAg-- ; cor=0.848; Ncor=0.484; logoDP=3.529; NsEucl=0.900; NSW=0.919; rcor=67; rNcor=305; rlogoDP=261; rNsEucl=100; rNSW=66; rank_mean=159.800; match_rank= a 0 0 0 0 0 96 0 96 0 64 96 10 0 0 c 0 0 0 0 0 0 10 0 0 10 0 10 0 0 g 0 0 0 0 10 0 1 0 0 10 0 64 0 0 t 0 0 0 0 86 0 85 0 96 12 0 12 0 0

TRANSCRIPTION_1qnb_B_3D-footprint_shift1 (TRANSCRIPTION:1qnb_B:3D-footprint) 0.876 0.438 3.579 0.902 0.932 46 387 258 88 45 164.800
; 1_m1_assembly_1 versus TRANSCRIPTION_1qnb_B_3D-footprint (TRANSCRIPTION:1qnb_B:3D-footprint); m=9/21; ncol2=7; w=0; offset=1; strand=D; shift=1; score= 164.8; -AtTTATA------ ; cor=0.876; Ncor=0.438; logoDP=3.579; NsEucl=0.902; NSW=0.932; rcor=46; rNcor=387; rlogoDP=258; rNsEucl=88; rNSW=45; rank_mean=164.800; match_rank= a 0 96 16 0 0 80 0 80 0 0 0 0 0 0 c 0 0 16 0 0 0 0 0 0 0 0 0 0 0 g 0 0 16 0 0 16 0 16 0 0 0 0 0 0 t 0 0 48 96 96 0 96 0 0 0 0 0 0 0

PROTEIN_1vol_AB_3D-footprint_shift0 (PROTEIN:1vol_AB:3D-footprint) 0.838 0.479 4.359 0.893 0.908 77 313 216 143 104 170.600
; 1_m1_assembly_1 versus PROTEIN_1vol_AB_3D-footprint (PROTEIN:1vol_AB:3D-footprint); m=10/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 170.6; cTtTTATA------ ; cor=0.838; Ncor=0.479; logoDP=4.359; NsEucl=0.893; NSW=0.908; rcor=77; rNcor=313; rlogoDP=216; rNsEucl=143; rNSW=104; rank_mean=170.600; match_rank= a 0 0 16 0 0 96 0 96 0 0 0 0 0 0 c 64 0 16 0 0 0 0 0 0 0 0 0 0 0 g 16 0 16 0 0 0 0 0 0 0 0 0 0 0 t 16 96 48 96 96 0 96 0 0 0 0 0 0 0

TATA_1vto_B_3D-footprint_rc_shift0 (TATA:1vto_B:3D-footprint_rc) 0.858 0.490 1.511 0.899 0.918 58 302 316 107 71 170.800
; 1_m1_assembly_1 versus TATA_1vto_B_3D-footprint_rc (TATA:1vto_B:3D-footprint_rc); m=11/21; ncol2=8; w=0; offset=0; strand=R; shift=0; score= 170.8; cTtTTATA------ ; cor=0.858; Ncor=0.490; logoDP=1.511; NsEucl=0.899; NSW=0.918; rcor=58; rNcor=302; rlogoDP=316; rNsEucl=107; rNSW=71; rank_mean=170.800; match_rank= a 13 0 13 0 0 96 0 96 0 0 0 0 0 0 c 57 0 13 0 0 0 0 0 0 0 0 0 0 0 g 13 0 16 0 0 0 0 0 0 0 0 0 0 0 t 13 96 54 96 96 0 96 0 0 0 0 0 0 0

PRH_M1167_1.02_CISBP_rc_shift1 (PRH:M1167_1.02:CISBP_rc) 0.839 0.479 3.972 0.893 0.908 75 312 241 141 102 174.200
; 1_m1_assembly_1 versus PRH_M1167_1.02_CISBP_rc (PRH:M1167_1.02:CISBP_rc); m=12/21; ncol2=8; w=0; offset=1; strand=R; shift=1; score= 174.2; -TwATATAT----- ; cor=0.839; Ncor=0.479; logoDP=3.972; NsEucl=0.893; NSW=0.908; rcor=75; rNcor=312; rlogoDP=241; rNsEucl=141; rNSW=102; rank_mean=174.200; match_rank= a 0 20 50 86 0 100 0 100 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 80 50 14 100 0 100 0 100 0 0 0 0 0

TATA_1vtl_E_3D-footprint_rc_shift0 (TATA:1vtl_E:3D-footprint_rc) 0.838 0.479 1.518 0.893 0.908 77 313 315 143 104 190.400
; 1_m1_assembly_1 versus TATA_1vtl_E_3D-footprint_rc (TATA:1vtl_E:3D-footprint_rc); m=13/21; ncol2=8; w=0; offset=0; strand=R; shift=0; score= 190.4; cTtTTATA------ ; cor=0.838; Ncor=0.479; logoDP=1.518; NsEucl=0.893; NSW=0.908; rcor=77; rNcor=313; rlogoDP=315; rNsEucl=143; rNSW=104; rank_mean=190.400; match_rank= a 0 0 16 0 0 96 0 96 0 0 0 0 0 0 c 64 0 16 0 0 0 0 0 0 0 0 0 0 0 g 16 0 16 0 0 0 0 0 0 0 0 0 0 0 t 16 96 48 96 96 0 96 0 0 0 0 0 0 0

AHL12_AHL12_3_ArabidopsisPBM_rc_shift0 (AHL12:AHL12_3:ArabidopsisPBM_rc) 0.723 0.516 1.975 0.905 0.909 346 271 299 73 98 217.400
; 1_m1_assembly_1 versus AHL12_AHL12_3_ArabidopsisPBM_rc (AHL12:AHL12_3:ArabidopsisPBM_rc); m=14/21; ncol2=10; w=0; offset=0; strand=R; shift=0; score= 217.4; wAwwwwwwTw---- ; cor=0.723; Ncor=0.516; logoDP=1.975; NsEucl=0.905; NSW=0.909; rcor=346; rNcor=271; rlogoDP=299; rNsEucl=73; rNSW=98; rank_mean=217.400; match_rank= a 52 83 45 55 35 64 43 54 10 36 0 0 0 0 c 5 2 0 1 0 1 1 1 4 11 0 0 0 0 g 18 4 1 1 1 0 1 1 2 11 0 0 0 0 t 25 11 54 43 64 35 55 44 84 42 0 0 0 0

TATA-box-binding_6uep_B_3D-footprint_shift0 (TATA-box-binding:6uep_B:3D-footprint) 0.799 0.456 4.347 0.884 0.892 139 349 217 231 164 220.000
; 1_m1_assembly_1 versus TATA-box-binding_6uep_B_3D-footprint (TATA-box-binding:6uep_B:3D-footprint); m=15/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 220; cCtTTATA------ ; cor=0.799; Ncor=0.456; logoDP=4.347; NsEucl=0.884; NSW=0.892; rcor=139; rNcor=349; rlogoDP=217; rNsEucl=231; rNSW=164; rank_mean=220.000; match_rank= a 13 0 16 0 0 96 0 96 0 0 0 0 0 0 c 54 96 13 0 0 0 0 0 0 0 0 0 0 0 g 13 0 13 0 0 0 0 0 0 0 0 0 0 0 t 16 0 54 96 96 0 96 0 0 0 0 0 0 0

TATA-box-binding_6uer_A_3D-footprint_shift0 (TATA-box-binding:6uer_A:3D-footprint) 0.798 0.456 4.347 0.883 0.891 145 351 218 236 171 224.200
; 1_m1_assembly_1 versus TATA-box-binding_6uer_A_3D-footprint (TATA-box-binding:6uer_A:3D-footprint); m=16/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 224.2; cCtTTATA------ ; cor=0.798; Ncor=0.456; logoDP=4.347; NsEucl=0.883; NSW=0.891; rcor=145; rNcor=351; rlogoDP=218; rNsEucl=236; rNSW=171; rank_mean=224.200; match_rank= a 16 0 16 0 0 96 0 96 0 0 0 0 0 0 c 54 96 13 0 0 0 0 0 0 0 0 0 0 0 g 13 0 13 0 0 0 0 0 0 0 0 0 0 0 t 13 0 54 96 96 0 96 0 0 0 0 0 0 0

TATA-box-binding_6ueq_B_3D-footprint_shift0 (TATA-box-binding:6ueq_B:3D-footprint) 0.791 0.452 3.536 0.885 0.894 153 354 260 222 156 229.000
; 1_m1_assembly_1 versus TATA-box-binding_6ueq_B_3D-footprint (TATA-box-binding:6ueq_B:3D-footprint); m=17/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 229; CTtTTATa------ ; cor=0.791; Ncor=0.452; logoDP=3.536; NsEucl=0.885; NSW=0.894; rcor=153; rNcor=354; rlogoDP=260; rNsEucl=222; rNSW=156; rank_mean=229.000; match_rank= a 0 0 12 1 0 96 0 64 0 0 0 0 0 0 c 85 0 10 0 0 0 0 10 0 0 0 0 0 0 g 10 0 10 10 0 0 0 12 0 0 0 0 0 0 t 1 96 64 85 96 0 96 10 0 0 0 0 0 0

TRANSCRIPTION_1qn3_B_3D-footprint_rc_shift0 (TRANSCRIPTION:1qn3_B:3D-footprint_rc) 0.796 0.455 1.449 0.883 0.891 148 352 319 239 175 246.600
; 1_m1_assembly_1 versus TRANSCRIPTION_1qn3_B_3D-footprint_rc (TRANSCRIPTION:1qn3_B:3D-footprint_rc); m=18/21; ncol2=8; w=0; offset=0; strand=R; shift=0; score= 246.6; cGtTTATA------ ; cor=0.796; Ncor=0.455; logoDP=1.449; NsEucl=0.883; NSW=0.891; rcor=148; rNcor=352; rlogoDP=319; rNsEucl=239; rNSW=175; rank_mean=246.600; match_rank= a 13 0 13 0 0 96 0 96 0 0 0 0 0 0 c 54 0 13 0 0 0 0 0 0 0 0 0 0 0 g 16 96 16 0 0 0 0 0 0 0 0 0 0 0 t 13 0 54 96 96 0 96 0 0 0 0 0 0 0

TRANSCRIPTION_1qn6_B_3D-footprint_rc_shift0 (TRANSCRIPTION:1qn6_B:3D-footprint_rc) 0.774 0.442 1.457 0.878 0.881 193 376 318 274 231 278.400
; 1_m1_assembly_1 versus TRANSCRIPTION_1qn6_B_3D-footprint_rc (TRANSCRIPTION:1qn6_B:3D-footprint_rc); m=19/21; ncol2=8; w=0; offset=0; strand=R; shift=0; score= 278.4; cTaTTATA------ ; cor=0.774; Ncor=0.442; logoDP=1.457; NsEucl=0.878; NSW=0.881; rcor=193; rNcor=376; rlogoDP=318; rNsEucl=274; rNSW=231; rank_mean=278.400; match_rank= a 16 0 54 0 0 96 0 96 0 0 0 0 0 0 c 54 0 16 0 0 0 0 0 0 0 0 0 0 0 g 13 0 13 0 0 0 0 0 0 0 0 0 0 0 t 13 96 13 96 96 0 96 0 0 0 0 0 0 0

TRANSCRIPTION_1qn5_B_3D-footprint_shift0 (TRANSCRIPTION:1qn5_B:3D-footprint) 0.713 0.407 3.148 0.874 0.873 387 439 272 311 292 340.200
; 1_m1_assembly_1 versus TRANSCRIPTION_1qn5_B_3D-footprint (TRANSCRIPTION:1qn5_B:3D-footprint); m=20/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 340.2; cTCTTATA------ ; cor=0.713; Ncor=0.407; logoDP=3.148; NsEucl=0.874; NSW=0.873; rcor=387; rNcor=439; rlogoDP=272; rNsEucl=311; rNSW=292; rank_mean=340.200; match_rank= a 14 0 9 2 0 67 0 85 0 0 0 0 0 0 c 52 0 67 2 0 9 0 3 0 0 0 0 0 0 g 16 0 11 4 0 9 0 3 0 0 0 0 0 0 t 14 96 9 88 96 11 96 5 0 0 0 0 0 0

AT2G20110_M0588_1.02_CISBP_shift1 (AT2G20110:M0588_1.02:CISBP) 0.712 0.407 3.421 0.872 0.868 394 443 266 324 310 347.400
; 1_m1_assembly_1 versus AT2G20110_M0588_1.02_CISBP (AT2G20110:M0588_1.02:CISBP); m=21/21; ncol2=8; w=0; offset=1; strand=D; shift=1; score= 347.4; -rTTTAAAh----- ; cor=0.712; Ncor=0.407; logoDP=3.421; NsEucl=0.872; NSW=0.868; rcor=394; rNcor=443; rlogoDP=266; rNsEucl=324; rNSW=310; rank_mean=347.400; match_rank= a 0 40 0 1 0 80 100 99 25 0 0 0 0 0 c 0 0 1 0 20 0 0 0 25 0 0 0 0 0 g 0 40 0 0 0 20 0 0 0 0 0 0 0 0 t 0 20 99 99 80 0 0 1 50 0 0 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
1_m1_assembly_1_shift0 (assembly_1)												; 1_m1_assembly_1 (assembly_1); m=0 (reference); ncol1=14; shift=0; ncol=14; wwTTTATATAAAww ; Alignment reference a 831 1071 253 578 200 2260 236 2355 300 2379 1928 2329 1000 1222 c 381 346 101 122 109 97 95 86 115 84 144 89 355 338 g 338 355 89 144 84 115 86 95 97 109 122 101 346 381 t 1222 1000 2329 1928 2379 300 2355 236 2260 200 578 253 1071 831
ZFHD10-3_EEAD0065_EEADannot_shift0 (ZFHD10-3:EEAD0065:EEADannot)	0.857	0.612	4.763	0.912	0.923	59	143	194	41	59	99.200	; 1_m1_assembly_1 versus ZFHD10-3_EEAD0065_EEADannot (ZFHD10-3:EEAD0065:EEADannot); m=1/21; ncol2=10; w=0; offset=0; strand=D; shift=0; score= 99.2; TATATATATA---- ; cor=0.857; Ncor=0.612; logoDP=4.763; NsEucl=0.912; NSW=0.923; rcor=59; rNcor=143; rlogoDP=194; rNsEucl=41; rNSW=59; rank_mean=99.200; match_rank= a 10 90 10 90 10 90 10 90 10 90 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 90 10 90 10 90 10 90 10 90 10 0 0 0 0
TRANSCRIPTION_1qn4_B_3D-footprint_shift0 (TRANSCRIPTION:1qn4_B:3D-footprint)	0.880	0.503	4.391	0.906	0.929	40	285	211	68	50	130.800	; 1_m1_assembly_1 versus TRANSCRIPTION_1qn4_B_3D-footprint (TRANSCRIPTION:1qn4_B:3D-footprint); m=2/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 130.8; aTtTTATA------ ; cor=0.880; Ncor=0.503; logoDP=4.391; NsEucl=0.906; NSW=0.929; rcor=40; rNcor=285; rlogoDP=211; rNsEucl=68; rNSW=50; rank_mean=130.800; match_rank= a 54 0 16 0 0 96 0 96 0 0 0 0 0 0 c 16 0 13 0 0 0 0 0 0 0 0 0 0 0 g 13 0 13 0 0 0 0 0 0 0 0 0 0 0 t 13 96 54 96 96 0 96 0 0 0 0 0 0 0
AT4G17950_M0119_1.02_CISBP_shift4 (AT4G17950:M0119_1.02:CISBP)	0.806	0.576	2.977	0.918	0.933	127	200	279	30	44	136.000	; 1_m1_assembly_1 versus AT4G17950_M0119_1.02_CISBP (AT4G17950:M0119_1.02:CISBP); m=3/21; ncol2=10; w=0; offset=4; strand=D; shift=4; score= 136; ----dAWWTAWWta ; cor=0.806; Ncor=0.576; logoDP=2.977; NsEucl=0.918; NSW=0.933; rcor=127; rNcor=200; rlogoDP=279; rNsEucl=30; rNSW=44; rank_mean=136.000; match_rank= a 0 0 0 0 25 83 29 70 0 80 69 30 21 32 c 0 0 0 0 15 2 0 0 0 0 0 0 10 23 g 0 0 0 0 25 2 0 0 0 0 0 0 10 22 t 0 0 0 0 35 13 71 30 100 20 31 70 59 23
TATA-box-binding_6ueo_G_3D-footprint_rc_shift0 (TATA-box-binding:6ueo_G:3D-footprint_rc)	0.894	0.511	1.594	0.913	0.939	27	276	309	38	32	136.400	; 1_m1_assembly_1 versus TATA-box-binding_6ueo_G_3D-footprint_rc (TATA-box-binding:6ueo_G:3D-footprint_rc); m=4/21; ncol2=8; w=0; offset=0; strand=R; shift=0; score= 136.4; CTTTTATA------ ; cor=0.894; Ncor=0.511; logoDP=1.594; NsEucl=0.913; NSW=0.939; rcor=27; rNcor=276; rlogoDP=309; rNsEucl=38; rNSW=32; rank_mean=136.400; match_rank= a 9 9 9 0 0 96 0 96 0 0 0 0 0 0 c 67 11 9 0 0 0 0 0 0 0 0 0 0 0 g 9 9 11 0 0 0 0 0 0 0 0 0 0 0 t 11 67 67 96 96 0 96 0 0 0 0 0 0 0
TATA-box-binding_6njq_A_3D-footprint_shift1 (TATA-box-binding:6njq_A:3D-footprint)	0.892	0.446	3.818	0.910	0.944	29	370	252	48	25	144.800	; 1_m1_assembly_1 versus TATA-box-binding_6njq_A_3D-footprint (TATA-box-binding:6njq_A:3D-footprint); m=5/21; ncol2=7; w=0; offset=1; strand=D; shift=1; score= 144.8; -GTTTATA------ ; cor=0.892; Ncor=0.446; logoDP=3.818; NsEucl=0.910; NSW=0.944; rcor=29; rNcor=370; rlogoDP=252; rNsEucl=48; rNSW=25; rank_mean=144.800; match_rank= a 0 9 11 0 0 67 0 96 0 0 0 0 0 0 c 0 9 9 0 0 9 0 0 0 0 0 0 0 0 g 0 69 9 0 0 11 0 0 0 0 0 0 0 0 t 0 9 67 96 96 9 96 0 0 0 0 0 0 0
AHL13_MA2374.1_JASPAR_rc_shift1 (AHL13:MA2374.1:JASPAR_rc)	0.847	0.484	2.503	0.914	0.940	68	306	291	37	31	146.600	; 1_m1_assembly_1 versus AHL13_MA2374.1_JASPAR_rc (AHL13:MA2374.1:JASPAR_rc); m=6/21; ncol2=8; w=0; offset=1; strand=R; shift=1; score= 146.6; -aWWTAWWT----- ; cor=0.847; Ncor=0.484; logoDP=2.503; NsEucl=0.914; NSW=0.940; rcor=68; rNcor=306; rlogoDP=291; rNsEucl=37; rNSW=31; rank_mean=146.600; match_rank= a 0 592 701 312 197 999 297 706 119 0 0 0 0 0 c 0 97 0 0 0 0 0 0 24 0 0 0 0 0 g 0 97 0 0 0 0 0 0 24 0 0 0 0 0 t 0 213 297 686 802 0 701 292 831 0 0 0 0 0
TRANSCRIPTION_1qne_B_3D-footprint_shift0 (TRANSCRIPTION:1qne_B:3D-footprint)	0.859	0.491	4.390	0.899	0.919	57	300	213	106	69	149.000	; 1_m1_assembly_1 versus TRANSCRIPTION_1qne_B_3D-footprint (TRANSCRIPTION:1qne_B:3D-footprint); m=7/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 149; cTtTTATA------ ; cor=0.859; Ncor=0.491; logoDP=4.390; NsEucl=0.899; NSW=0.919; rcor=57; rNcor=300; rlogoDP=213; rNsEucl=106; rNSW=69; rank_mean=149.000; match_rank= a 13 0 16 0 0 96 0 96 0 0 0 0 0 0 c 57 0 13 0 0 0 0 0 0 0 0 0 0 0 g 13 0 13 0 0 0 0 0 0 0 0 0 0 0 t 13 96 54 96 96 0 96 0 0 0 0 0 0 0
TRANSCRIPTION_1qn7_B_3D-footprint_rc_shift4 (TRANSCRIPTION:1qn7_B:3D-footprint_rc)	0.848	0.484	3.529	0.900	0.919	67	305	261	100	66	159.800	; 1_m1_assembly_1 versus TRANSCRIPTION_1qn7_B_3D-footprint_rc (TRANSCRIPTION:1qn7_B:3D-footprint_rc); m=8/21; ncol2=8; w=0; offset=4; strand=R; shift=4; score= 159.8; ----TATATaAg-- ; cor=0.848; Ncor=0.484; logoDP=3.529; NsEucl=0.900; NSW=0.919; rcor=67; rNcor=305; rlogoDP=261; rNsEucl=100; rNSW=66; rank_mean=159.800; match_rank= a 0 0 0 0 0 96 0 96 0 64 96 10 0 0 c 0 0 0 0 0 0 10 0 0 10 0 10 0 0 g 0 0 0 0 10 0 1 0 0 10 0 64 0 0 t 0 0 0 0 86 0 85 0 96 12 0 12 0 0
TRANSCRIPTION_1qnb_B_3D-footprint_shift1 (TRANSCRIPTION:1qnb_B:3D-footprint)	0.876	0.438	3.579	0.902	0.932	46	387	258	88	45	164.800	; 1_m1_assembly_1 versus TRANSCRIPTION_1qnb_B_3D-footprint (TRANSCRIPTION:1qnb_B:3D-footprint); m=9/21; ncol2=7; w=0; offset=1; strand=D; shift=1; score= 164.8; -AtTTATA------ ; cor=0.876; Ncor=0.438; logoDP=3.579; NsEucl=0.902; NSW=0.932; rcor=46; rNcor=387; rlogoDP=258; rNsEucl=88; rNSW=45; rank_mean=164.800; match_rank= a 0 96 16 0 0 80 0 80 0 0 0 0 0 0 c 0 0 16 0 0 0 0 0 0 0 0 0 0 0 g 0 0 16 0 0 16 0 16 0 0 0 0 0 0 t 0 0 48 96 96 0 96 0 0 0 0 0 0 0
PROTEIN_1vol_AB_3D-footprint_shift0 (PROTEIN:1vol_AB:3D-footprint)	0.838	0.479	4.359	0.893	0.908	77	313	216	143	104	170.600	; 1_m1_assembly_1 versus PROTEIN_1vol_AB_3D-footprint (PROTEIN:1vol_AB:3D-footprint); m=10/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 170.6; cTtTTATA------ ; cor=0.838; Ncor=0.479; logoDP=4.359; NsEucl=0.893; NSW=0.908; rcor=77; rNcor=313; rlogoDP=216; rNsEucl=143; rNSW=104; rank_mean=170.600; match_rank= a 0 0 16 0 0 96 0 96 0 0 0 0 0 0 c 64 0 16 0 0 0 0 0 0 0 0 0 0 0 g 16 0 16 0 0 0 0 0 0 0 0 0 0 0 t 16 96 48 96 96 0 96 0 0 0 0 0 0 0
TATA_1vto_B_3D-footprint_rc_shift0 (TATA:1vto_B:3D-footprint_rc)	0.858	0.490	1.511	0.899	0.918	58	302	316	107	71	170.800	; 1_m1_assembly_1 versus TATA_1vto_B_3D-footprint_rc (TATA:1vto_B:3D-footprint_rc); m=11/21; ncol2=8; w=0; offset=0; strand=R; shift=0; score= 170.8; cTtTTATA------ ; cor=0.858; Ncor=0.490; logoDP=1.511; NsEucl=0.899; NSW=0.918; rcor=58; rNcor=302; rlogoDP=316; rNsEucl=107; rNSW=71; rank_mean=170.800; match_rank= a 13 0 13 0 0 96 0 96 0 0 0 0 0 0 c 57 0 13 0 0 0 0 0 0 0 0 0 0 0 g 13 0 16 0 0 0 0 0 0 0 0 0 0 0 t 13 96 54 96 96 0 96 0 0 0 0 0 0 0
PRH_M1167_1.02_CISBP_rc_shift1 (PRH:M1167_1.02:CISBP_rc)	0.839	0.479	3.972	0.893	0.908	75	312	241	141	102	174.200	; 1_m1_assembly_1 versus PRH_M1167_1.02_CISBP_rc (PRH:M1167_1.02:CISBP_rc); m=12/21; ncol2=8; w=0; offset=1; strand=R; shift=1; score= 174.2; -TwATATAT----- ; cor=0.839; Ncor=0.479; logoDP=3.972; NsEucl=0.893; NSW=0.908; rcor=75; rNcor=312; rlogoDP=241; rNsEucl=141; rNSW=102; rank_mean=174.200; match_rank= a 0 20 50 86 0 100 0 100 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 80 50 14 100 0 100 0 100 0 0 0 0 0
TATA_1vtl_E_3D-footprint_rc_shift0 (TATA:1vtl_E:3D-footprint_rc)	0.838	0.479	1.518	0.893	0.908	77	313	315	143	104	190.400	; 1_m1_assembly_1 versus TATA_1vtl_E_3D-footprint_rc (TATA:1vtl_E:3D-footprint_rc); m=13/21; ncol2=8; w=0; offset=0; strand=R; shift=0; score= 190.4; cTtTTATA------ ; cor=0.838; Ncor=0.479; logoDP=1.518; NsEucl=0.893; NSW=0.908; rcor=77; rNcor=313; rlogoDP=315; rNsEucl=143; rNSW=104; rank_mean=190.400; match_rank= a 0 0 16 0 0 96 0 96 0 0 0 0 0 0 c 64 0 16 0 0 0 0 0 0 0 0 0 0 0 g 16 0 16 0 0 0 0 0 0 0 0 0 0 0 t 16 96 48 96 96 0 96 0 0 0 0 0 0 0
AHL12_AHL12_3_ArabidopsisPBM_rc_shift0 (AHL12:AHL12_3:ArabidopsisPBM_rc)	0.723	0.516	1.975	0.905	0.909	346	271	299	73	98	217.400	; 1_m1_assembly_1 versus AHL12_AHL12_3_ArabidopsisPBM_rc (AHL12:AHL12_3:ArabidopsisPBM_rc); m=14/21; ncol2=10; w=0; offset=0; strand=R; shift=0; score= 217.4; wAwwwwwwTw---- ; cor=0.723; Ncor=0.516; logoDP=1.975; NsEucl=0.905; NSW=0.909; rcor=346; rNcor=271; rlogoDP=299; rNsEucl=73; rNSW=98; rank_mean=217.400; match_rank= a 52 83 45 55 35 64 43 54 10 36 0 0 0 0 c 5 2 0 1 0 1 1 1 4 11 0 0 0 0 g 18 4 1 1 1 0 1 1 2 11 0 0 0 0 t 25 11 54 43 64 35 55 44 84 42 0 0 0 0
TATA-box-binding_6uep_B_3D-footprint_shift0 (TATA-box-binding:6uep_B:3D-footprint)	0.799	0.456	4.347	0.884	0.892	139	349	217	231	164	220.000	; 1_m1_assembly_1 versus TATA-box-binding_6uep_B_3D-footprint (TATA-box-binding:6uep_B:3D-footprint); m=15/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 220; cCtTTATA------ ; cor=0.799; Ncor=0.456; logoDP=4.347; NsEucl=0.884; NSW=0.892; rcor=139; rNcor=349; rlogoDP=217; rNsEucl=231; rNSW=164; rank_mean=220.000; match_rank= a 13 0 16 0 0 96 0 96 0 0 0 0 0 0 c 54 96 13 0 0 0 0 0 0 0 0 0 0 0 g 13 0 13 0 0 0 0 0 0 0 0 0 0 0 t 16 0 54 96 96 0 96 0 0 0 0 0 0 0
TATA-box-binding_6uer_A_3D-footprint_shift0 (TATA-box-binding:6uer_A:3D-footprint)	0.798	0.456	4.347	0.883	0.891	145	351	218	236	171	224.200	; 1_m1_assembly_1 versus TATA-box-binding_6uer_A_3D-footprint (TATA-box-binding:6uer_A:3D-footprint); m=16/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 224.2; cCtTTATA------ ; cor=0.798; Ncor=0.456; logoDP=4.347; NsEucl=0.883; NSW=0.891; rcor=145; rNcor=351; rlogoDP=218; rNsEucl=236; rNSW=171; rank_mean=224.200; match_rank= a 16 0 16 0 0 96 0 96 0 0 0 0 0 0 c 54 96 13 0 0 0 0 0 0 0 0 0 0 0 g 13 0 13 0 0 0 0 0 0 0 0 0 0 0 t 13 0 54 96 96 0 96 0 0 0 0 0 0 0
TATA-box-binding_6ueq_B_3D-footprint_shift0 (TATA-box-binding:6ueq_B:3D-footprint)	0.791	0.452	3.536	0.885	0.894	153	354	260	222	156	229.000	; 1_m1_assembly_1 versus TATA-box-binding_6ueq_B_3D-footprint (TATA-box-binding:6ueq_B:3D-footprint); m=17/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 229; CTtTTATa------ ; cor=0.791; Ncor=0.452; logoDP=3.536; NsEucl=0.885; NSW=0.894; rcor=153; rNcor=354; rlogoDP=260; rNsEucl=222; rNSW=156; rank_mean=229.000; match_rank= a 0 0 12 1 0 96 0 64 0 0 0 0 0 0 c 85 0 10 0 0 0 0 10 0 0 0 0 0 0 g 10 0 10 10 0 0 0 12 0 0 0 0 0 0 t 1 96 64 85 96 0 96 10 0 0 0 0 0 0
TRANSCRIPTION_1qn3_B_3D-footprint_rc_shift0 (TRANSCRIPTION:1qn3_B:3D-footprint_rc)	0.796	0.455	1.449	0.883	0.891	148	352	319	239	175	246.600	; 1_m1_assembly_1 versus TRANSCRIPTION_1qn3_B_3D-footprint_rc (TRANSCRIPTION:1qn3_B:3D-footprint_rc); m=18/21; ncol2=8; w=0; offset=0; strand=R; shift=0; score= 246.6; cGtTTATA------ ; cor=0.796; Ncor=0.455; logoDP=1.449; NsEucl=0.883; NSW=0.891; rcor=148; rNcor=352; rlogoDP=319; rNsEucl=239; rNSW=175; rank_mean=246.600; match_rank= a 13 0 13 0 0 96 0 96 0 0 0 0 0 0 c 54 0 13 0 0 0 0 0 0 0 0 0 0 0 g 16 96 16 0 0 0 0 0 0 0 0 0 0 0 t 13 0 54 96 96 0 96 0 0 0 0 0 0 0
TRANSCRIPTION_1qn6_B_3D-footprint_rc_shift0 (TRANSCRIPTION:1qn6_B:3D-footprint_rc)	0.774	0.442	1.457	0.878	0.881	193	376	318	274	231	278.400	; 1_m1_assembly_1 versus TRANSCRIPTION_1qn6_B_3D-footprint_rc (TRANSCRIPTION:1qn6_B:3D-footprint_rc); m=19/21; ncol2=8; w=0; offset=0; strand=R; shift=0; score= 278.4; cTaTTATA------ ; cor=0.774; Ncor=0.442; logoDP=1.457; NsEucl=0.878; NSW=0.881; rcor=193; rNcor=376; rlogoDP=318; rNsEucl=274; rNSW=231; rank_mean=278.400; match_rank= a 16 0 54 0 0 96 0 96 0 0 0 0 0 0 c 54 0 16 0 0 0 0 0 0 0 0 0 0 0 g 13 0 13 0 0 0 0 0 0 0 0 0 0 0 t 13 96 13 96 96 0 96 0 0 0 0 0 0 0
TRANSCRIPTION_1qn5_B_3D-footprint_shift0 (TRANSCRIPTION:1qn5_B:3D-footprint)	0.713	0.407	3.148	0.874	0.873	387	439	272	311	292	340.200	; 1_m1_assembly_1 versus TRANSCRIPTION_1qn5_B_3D-footprint (TRANSCRIPTION:1qn5_B:3D-footprint); m=20/21; ncol2=8; w=0; offset=0; strand=D; shift=0; score= 340.2; cTCTTATA------ ; cor=0.713; Ncor=0.407; logoDP=3.148; NsEucl=0.874; NSW=0.873; rcor=387; rNcor=439; rlogoDP=272; rNsEucl=311; rNSW=292; rank_mean=340.200; match_rank= a 14 0 9 2 0 67 0 85 0 0 0 0 0 0 c 52 0 67 2 0 9 0 3 0 0 0 0 0 0 g 16 0 11 4 0 9 0 3 0 0 0 0 0 0 t 14 96 9 88 96 11 96 5 0 0 0 0 0 0
AT2G20110_M0588_1.02_CISBP_shift1 (AT2G20110:M0588_1.02:CISBP)	0.712	0.407	3.421	0.872	0.868	394	443	266	324	310	347.400	; 1_m1_assembly_1 versus AT2G20110_M0588_1.02_CISBP (AT2G20110:M0588_1.02:CISBP); m=21/21; ncol2=8; w=0; offset=1; strand=D; shift=1; score= 347.4; -rTTTAAAh----- ; cor=0.712; Ncor=0.407; logoDP=3.421; NsEucl=0.872; NSW=0.868; rcor=394; rNcor=443; rlogoDP=266; rNsEucl=324; rNSW=310; rank_mean=347.400; match_rank= a 0 40 0 1 0 80 100 99 25 0 0 0 0 0 c 0 0 1 0 20 0 0 0 25 0 0 0 0 0 g 0 40 0 0 0 20 0 0 0 0 0 0 0 0 t 0 20 99 99 80 0 0 1 50 0 0 0 0 0

One-to-n matrix alignment; reference matrix: 1_m12_assembly_12_shift7 ; 8 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
1_m12_assembly_12_shift7 (assembly_12)
; 1_m12_assembly_12 (assembly_12); m=0 (reference); ncol1=11; shift=7; ncol=18; -------wwACACACAwa ; Alignment reference a 0 0 0 0 0 0 0 465 349 935 109 968 120 990 122 960 379 462 c 0 0 0 0 0 0 0 160 250 40 797 25 821 6 807 12 229 153 g 0 0 0 0 0 0 0 131 170 16 33 6 25 11 25 19 123 170 t 0 0 0 0 0 0 0 271 258 36 88 28 61 20 73 36 296 242

CRL1BOX_EEAD0081_EEADannot_shift12 (CRL1BOX:EEAD0081:EEADannot) 0.905 0.494 2.728 0.923 0.964 16 295 287 21 8 125.400
; 1_m12_assembly_12 versus CRL1BOX_EEAD0081_EEADannot (CRL1BOX:EEAD0081:EEADannot); m=1/7; ncol2=6; w=0; offset=5; strand=D; shift=12; score= 125.4; ------------CACAmm ; cor=0.905; Ncor=0.494; logoDP=2.728; NsEucl=0.923; NSW=0.964; rcor=16; rNcor=295; rlogoDP=287; rNsEucl=21; rNSW=8; rank_mean=125.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 7 93 14 84 44 27 c 0 0 0 0 0 0 0 0 0 0 0 0 79 7 86 0 42 56 g 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 9 14 15 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 2

CONS2_EEAD0008_EEADannot_rc_shift4 (CONS2:EEAD0008:EEADannot_rc) 0.862 0.431 1.550 0.910 0.943 52 396 312 50 26 167.200
; 1_m12_assembly_12 versus CONS2_EEAD0008_EEADannot_rc (CONS2:EEAD0008:EEADannot_rc); m=2/7; ncol2=10; w=-3; offset=-3; strand=R; shift=4; score= 167.2; ----CATnnnCACA---- ; cor=0.862; Ncor=0.431; logoDP=1.550; NsEucl=0.910; NSW=0.943; rcor=52; rNcor=396; rlogoDP=312; rNsEucl=50; rNSW=26; rank_mean=167.200; match_rank= a 0 0 0 0 0 100 0 25 25 25 0 100 0 100 0 0 0 0 c 0 0 0 0 100 0 0 25 25 25 100 0 100 0 0 0 0 0 g 0 0 0 0 0 0 0 25 25 25 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 100 25 25 25 0 0 0 0 0 0 0 0

ARF18_DYAD7_EEAD0031_EEADannot_shift0 (ARF18_DYAD7:EEAD0031:EEADannot) 0.710 0.434 3.942 0.909 0.909 405 392 243 55 99 238.800
; 1_m12_assembly_12 versus ARF18_DYAD7_EEAD0031_EEADannot (ARF18_DYAD7:EEAD0031:EEADannot); m=3/7; ncol2=18; w=-7; offset=-7; strand=D; shift=0; score= 238.8; arACAwrrwayarACAaa ; cor=0.710; Ncor=0.434; logoDP=3.942; NsEucl=0.909; NSW=0.909; rcor=405; rNcor=392; rlogoDP=243; rNsEucl=55; rNSW=99; rank_mean=238.800; match_rank= a 367 183 655 0 655 192 169 195 189 303 133 348 178 655 0 655 341 288 c 152 58 0 655 0 86 117 106 101 108 169 162 46 0 655 0 68 118 g 100 369 0 0 0 98 292 225 94 137 123 99 388 0 0 0 104 149 t 36 45 0 0 0 279 77 129 271 107 230 46 43 0 0 0 142 100

CONS1_EEAD0007_EEADannot_rc_shift5 (CONS1:EEAD0007:EEADannot_rc) 0.776 0.418 1.580 0.876 0.892 188 415 311 292 170 275.200
; 1_m12_assembly_12 versus CONS1_EEAD0007_EEADannot_rc (CONS1:EEAD0007:EEADannot_rc); m=4/7; ncol2=9; w=-2; offset=-2; strand=R; shift=5; score= 275.2; -----CATnnCACA---- ; cor=0.776; Ncor=0.418; logoDP=1.580; NsEucl=0.876; NSW=0.892; rcor=188; rNcor=415; rlogoDP=311; rNsEucl=292; rNSW=170; rank_mean=275.200; match_rank= a 0 0 0 0 0 0 100 0 25 25 0 100 0 100 0 0 0 0 c 0 0 0 0 0 100 0 0 25 25 100 0 100 0 0 0 0 0 g 0 0 0 0 0 0 0 0 25 25 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 100 25 25 0 0 0 0 0 0 0 0

e_gw1.279.28.1_M1413_1.02_CISBP_shift9 (e_gw1.279.28.1:M1413_1.02:CISBP) 0.703 0.487 2.293 0.889 0.889 434 303 293 177 188 279.000
; 1_m12_assembly_12 versus e_gw1.279.28.1_M1413_1.02_CISBP (e_gw1.279.28.1:M1413_1.02:CISBP); m=5/7; ncol2=11; w=0; offset=2; strand=D; shift=9; score= 279; ---------acAmgCAAy ; cor=0.703; Ncor=0.487; logoDP=2.293; NsEucl=0.889; NSW=0.889; rcor=434; rNcor=303; rlogoDP=293; rNsEucl=177; rNSW=188; rank_mean=279.000; match_rank= a 0 0 0 0 0 0 0 0 0 57 16 84 27 17 18 81 100 23 c 0 0 0 0 0 0 0 0 0 11 62 2 64 0 73 0 0 33 g 0 0 0 0 0 0 0 0 0 21 7 11 0 64 0 0 0 13 t 0 0 0 0 0 0 0 0 0 11 15 3 9 19 9 19 0 31

Lysine-specific_6jnn_B_3D-footprint_shift8 (Lysine-specific:6jnn_B:3D-footprint) 0.747 0.407 3.894 0.856 0.875 271 440 245 413 267 327.200
; 1_m12_assembly_12 versus Lysine-specific_6jnn_B_3D-footprint (Lysine-specific:6jnn_B:3D-footprint); m=6/7; ncol2=6; w=0; offset=1; strand=D; shift=8; score= 327.2; --------aACAGA---- ; cor=0.747; Ncor=0.407; logoDP=3.894; NsEucl=0.856; NSW=0.875; rcor=271; rNcor=440; rlogoDP=245; rNsEucl=413; rNSW=267; rank_mean=327.200; match_rank= a 0 0 0 0 0 0 0 0 39 96 0 96 3 72 0 0 0 0 c 0 0 0 0 0 0 0 0 19 0 96 0 3 8 0 0 0 0 g 0 0 0 0 0 0 0 0 19 0 0 0 85 8 0 0 0 0 t 0 0 0 0 0 0 0 0 19 0 0 0 5 8 0 0 0 0

Lysine-specific_6jnm_A_3D-footprint_rc_shift10 (Lysine-specific:6jnm_A:3D-footprint_rc) 0.702 0.447 0.873 0.858 0.860 438 368 331 399 357 378.600
; 1_m12_assembly_12 versus Lysine-specific_6jnm_A_3D-footprint_rc (Lysine-specific:6jnm_A:3D-footprint_rc); m=7/7; ncol2=7; w=0; offset=3; strand=R; shift=10; score= 378.6; ----------aACAnAG- ; cor=0.702; Ncor=0.447; logoDP=0.873; NsEucl=0.858; NSW=0.860; rcor=438; rNcor=368; rlogoDP=331; rNsEucl=399; rNSW=357; rank_mean=378.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 38 93 0 96 24 81 0 0 c 0 0 0 0 0 0 0 0 0 0 19 1 96 0 24 4 0 0 g 0 0 0 0 0 0 0 0 0 0 19 1 0 0 24 4 96 0 t 0 0 0 0 0 0 0 0 0 0 20 1 0 0 24 7 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
1_m12_assembly_12_shift7 (assembly_12)												; 1_m12_assembly_12 (assembly_12); m=0 (reference); ncol1=11; shift=7; ncol=18; -------wwACACACAwa ; Alignment reference a 0 0 0 0 0 0 0 465 349 935 109 968 120 990 122 960 379 462 c 0 0 0 0 0 0 0 160 250 40 797 25 821 6 807 12 229 153 g 0 0 0 0 0 0 0 131 170 16 33 6 25 11 25 19 123 170 t 0 0 0 0 0 0 0 271 258 36 88 28 61 20 73 36 296 242
CRL1BOX_EEAD0081_EEADannot_shift12 (CRL1BOX:EEAD0081:EEADannot)	0.905	0.494	2.728	0.923	0.964	16	295	287	21	8	125.400	; 1_m12_assembly_12 versus CRL1BOX_EEAD0081_EEADannot (CRL1BOX:EEAD0081:EEADannot); m=1/7; ncol2=6; w=0; offset=5; strand=D; shift=12; score= 125.4; ------------CACAmm ; cor=0.905; Ncor=0.494; logoDP=2.728; NsEucl=0.923; NSW=0.964; rcor=16; rNcor=295; rlogoDP=287; rNsEucl=21; rNSW=8; rank_mean=125.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 7 93 14 84 44 27 c 0 0 0 0 0 0 0 0 0 0 0 0 79 7 86 0 42 56 g 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 9 14 15 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 2
CONS2_EEAD0008_EEADannot_rc_shift4 (CONS2:EEAD0008:EEADannot_rc)	0.862	0.431	1.550	0.910	0.943	52	396	312	50	26	167.200	; 1_m12_assembly_12 versus CONS2_EEAD0008_EEADannot_rc (CONS2:EEAD0008:EEADannot_rc); m=2/7; ncol2=10; w=-3; offset=-3; strand=R; shift=4; score= 167.2; ----CATnnnCACA---- ; cor=0.862; Ncor=0.431; logoDP=1.550; NsEucl=0.910; NSW=0.943; rcor=52; rNcor=396; rlogoDP=312; rNsEucl=50; rNSW=26; rank_mean=167.200; match_rank= a 0 0 0 0 0 100 0 25 25 25 0 100 0 100 0 0 0 0 c 0 0 0 0 100 0 0 25 25 25 100 0 100 0 0 0 0 0 g 0 0 0 0 0 0 0 25 25 25 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 100 25 25 25 0 0 0 0 0 0 0 0
ARF18_DYAD7_EEAD0031_EEADannot_shift0 (ARF18_DYAD7:EEAD0031:EEADannot)	0.710	0.434	3.942	0.909	0.909	405	392	243	55	99	238.800	; 1_m12_assembly_12 versus ARF18_DYAD7_EEAD0031_EEADannot (ARF18_DYAD7:EEAD0031:EEADannot); m=3/7; ncol2=18; w=-7; offset=-7; strand=D; shift=0; score= 238.8; arACAwrrwayarACAaa ; cor=0.710; Ncor=0.434; logoDP=3.942; NsEucl=0.909; NSW=0.909; rcor=405; rNcor=392; rlogoDP=243; rNsEucl=55; rNSW=99; rank_mean=238.800; match_rank= a 367 183 655 0 655 192 169 195 189 303 133 348 178 655 0 655 341 288 c 152 58 0 655 0 86 117 106 101 108 169 162 46 0 655 0 68 118 g 100 369 0 0 0 98 292 225 94 137 123 99 388 0 0 0 104 149 t 36 45 0 0 0 279 77 129 271 107 230 46 43 0 0 0 142 100
CONS1_EEAD0007_EEADannot_rc_shift5 (CONS1:EEAD0007:EEADannot_rc)	0.776	0.418	1.580	0.876	0.892	188	415	311	292	170	275.200	; 1_m12_assembly_12 versus CONS1_EEAD0007_EEADannot_rc (CONS1:EEAD0007:EEADannot_rc); m=4/7; ncol2=9; w=-2; offset=-2; strand=R; shift=5; score= 275.2; -----CATnnCACA---- ; cor=0.776; Ncor=0.418; logoDP=1.580; NsEucl=0.876; NSW=0.892; rcor=188; rNcor=415; rlogoDP=311; rNsEucl=292; rNSW=170; rank_mean=275.200; match_rank= a 0 0 0 0 0 0 100 0 25 25 0 100 0 100 0 0 0 0 c 0 0 0 0 0 100 0 0 25 25 100 0 100 0 0 0 0 0 g 0 0 0 0 0 0 0 0 25 25 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 100 25 25 0 0 0 0 0 0 0 0
e_gw1.279.28.1_M1413_1.02_CISBP_shift9 (e_gw1.279.28.1:M1413_1.02:CISBP)	0.703	0.487	2.293	0.889	0.889	434	303	293	177	188	279.000	; 1_m12_assembly_12 versus e_gw1.279.28.1_M1413_1.02_CISBP (e_gw1.279.28.1:M1413_1.02:CISBP); m=5/7; ncol2=11; w=0; offset=2; strand=D; shift=9; score= 279; ---------acAmgCAAy ; cor=0.703; Ncor=0.487; logoDP=2.293; NsEucl=0.889; NSW=0.889; rcor=434; rNcor=303; rlogoDP=293; rNsEucl=177; rNSW=188; rank_mean=279.000; match_rank= a 0 0 0 0 0 0 0 0 0 57 16 84 27 17 18 81 100 23 c 0 0 0 0 0 0 0 0 0 11 62 2 64 0 73 0 0 33 g 0 0 0 0 0 0 0 0 0 21 7 11 0 64 0 0 0 13 t 0 0 0 0 0 0 0 0 0 11 15 3 9 19 9 19 0 31
Lysine-specific_6jnn_B_3D-footprint_shift8 (Lysine-specific:6jnn_B:3D-footprint)	0.747	0.407	3.894	0.856	0.875	271	440	245	413	267	327.200	; 1_m12_assembly_12 versus Lysine-specific_6jnn_B_3D-footprint (Lysine-specific:6jnn_B:3D-footprint); m=6/7; ncol2=6; w=0; offset=1; strand=D; shift=8; score= 327.2; --------aACAGA---- ; cor=0.747; Ncor=0.407; logoDP=3.894; NsEucl=0.856; NSW=0.875; rcor=271; rNcor=440; rlogoDP=245; rNsEucl=413; rNSW=267; rank_mean=327.200; match_rank= a 0 0 0 0 0 0 0 0 39 96 0 96 3 72 0 0 0 0 c 0 0 0 0 0 0 0 0 19 0 96 0 3 8 0 0 0 0 g 0 0 0 0 0 0 0 0 19 0 0 0 85 8 0 0 0 0 t 0 0 0 0 0 0 0 0 19 0 0 0 5 8 0 0 0 0
Lysine-specific_6jnm_A_3D-footprint_rc_shift10 (Lysine-specific:6jnm_A:3D-footprint_rc)	0.702	0.447	0.873	0.858	0.860	438	368	331	399	357	378.600	; 1_m12_assembly_12 versus Lysine-specific_6jnm_A_3D-footprint_rc (Lysine-specific:6jnm_A:3D-footprint_rc); m=7/7; ncol2=7; w=0; offset=3; strand=R; shift=10; score= 378.6; ----------aACAnAG- ; cor=0.702; Ncor=0.447; logoDP=0.873; NsEucl=0.858; NSW=0.860; rcor=438; rNcor=368; rlogoDP=331; rNsEucl=399; rNSW=357; rank_mean=378.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 38 93 0 96 24 81 0 0 c 0 0 0 0 0 0 0 0 0 0 19 1 96 0 24 4 0 0 g 0 0 0 0 0 0 0 0 0 0 19 1 0 0 24 4 96 0 t 0 0 0 0 0 0 0 0 0 0 20 1 0 0 24 7 0 0

One-to-n matrix alignment; reference matrix: 1_m2_assembly_2_shift5 ; 62 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
1_m2_assembly_2_shift5 (assembly_2)
; 1_m2_assembly_2 (assembly_2); m=0 (reference); ncol1=13; shift=5; ncol=18; -----wwwCAACGTGAww ; Alignment reference a 0 0 0 0 0 64 66 79 19 178 189 9 13 3 5 158 72 67 c 0 0 0 0 0 39 32 35 142 4 0 162 7 2 7 11 30 29 g 0 0 0 0 0 30 41 24 14 5 1 6 154 3 167 14 33 38 t 0 0 0 0 0 57 51 52 15 3 0 13 16 182 11 7 55 56

PIF3_MA0560.1_JASPAR_shift6 (PIF3:MA0560.1:JASPAR) 0.742 0.571 6.068 0.892 0.883 290 207 150 152 218 203.400
; 1_m2_assembly_2 versus PIF3_MA0560.1_JASPAR (PIF3:MA0560.1:JASPAR); m=1/61; ncol2=10; w=0; offset=1; strand=D; shift=6; score= 203.4; ------dgCCACGTGr-- ; cor=0.742; Ncor=0.571; logoDP=6.068; NsEucl=0.892; NSW=0.883; rcor=290; rNcor=207; rlogoDP=150; rNsEucl=152; rNSW=218; rank_mean=203.400; match_rank= a 0 0 0 0 0 0 210 58 19 0 527 0 0 0 0 259 0 0 c 0 0 0 0 0 0 26 131 399 527 0 409 0 0 0 33 0 0 g 0 0 0 0 0 0 148 222 94 0 0 0 527 0 527 137 0 0 t 0 0 0 0 0 0 143 116 15 0 0 118 0 527 0 98 0 0

DOF4.7_M0652_1.02_CISBP_shift5 (DOF4.7:M0652_1.02:CISBP) 0.746 0.516 1.418 0.902 0.914 276 270 320 85 80 206.200
; 1_m2_assembly_2 versus DOF4.7_M0652_1.02_CISBP (DOF4.7:M0652_1.02:CISBP); m=2/61; ncol2=9; w=0; offset=0; strand=D; shift=5; score= 206.2; -----hrawAAmGt---- ; cor=0.746; Ncor=0.516; logoDP=1.418; NsEucl=0.902; NSW=0.914; rcor=276; rNcor=270; rlogoDP=320; rNsEucl=85; rNSW=80; rank_mean=206.200; match_rank= a 0 0 0 0 0 26 25 37 37 79 74 46 14 19 0 0 0 0 c 0 0 0 0 0 25 23 17 12 6 10 39 4 23 0 0 0 0 g 0 0 0 0 0 24 29 22 13 3 4 6 71 18 0 0 0 0 t 0 0 0 0 0 25 23 24 38 12 12 9 11 40 0 0 0 0

BIM1_M0163_1.02_CISBP_shift8 (BIM1:M0163_1.02:CISBP) 0.721 0.554 3.425 0.898 0.896 354 219 264 112 147 219.200
; 1_m2_assembly_2 versus BIM1_M0163_1.02_CISBP (BIM1:M0163_1.02:CISBP); m=3/61; ncol2=10; w=0; offset=3; strand=D; shift=8; score= 219.2; --------bcaCGTGmyv ; cor=0.721; Ncor=0.554; logoDP=3.425; NsEucl=0.898; NSW=0.896; rcor=354; rNcor=219; rlogoDP=264; rNsEucl=112; rNSW=147; rank_mean=219.200; match_rank= a 0 0 0 0 0 0 0 0 22 13 58 6 14 0 0 37 15 26 c 0 0 0 0 0 0 0 0 25 65 10 77 6 2 0 30 34 25 g 0 0 0 0 0 0 0 0 28 10 18 2 80 0 99 15 24 26 t 0 0 0 0 0 0 0 0 25 12 14 15 0 98 1 18 27 23

BHLH99_ZmJAM2_Mo17_1_EEAD0237_EEADannot_shift0 (BHLH99_ZmJAM2_Mo17_1:EEAD0237:EEADannot) 0.748 0.415 5.199 0.901 0.902 268 423 180 93 133 219.400
; 1_m2_assembly_2 versus BHLH99_ZmJAM2_Mo17_1_EEAD0237_EEADannot (BHLH99_ZmJAM2_Mo17_1:EEAD0237:EEADannot); m=4/61; ncol2=15; w=-5; offset=-5; strand=D; shift=0; score= 219.4; mayrwkwaAmAYRTG--- ; cor=0.748; Ncor=0.415; logoDP=5.199; NsEucl=0.901; NSW=0.902; rcor=268; rNcor=423; rlogoDP=180; rNsEucl=93; rNSW=133; rank_mean=219.400; match_rank= a 30 64 9 52 29 14 33 65 69 35 98 0 30 0 0 0 0 0 c 54 8 44 2 5 3 4 5 12 65 0 72 0 0 0 0 0 0 g 3 9 7 38 1 31 9 6 8 0 0 0 70 0 95 0 0 0 t 13 19 40 8 65 52 54 24 11 0 2 28 0 100 5 0 0 0

BHLH91_MYC2B_B73_1_m1_EEAD0234_EEADannot_shift0 (BHLH91_MYC2B_B73_1_m1:EEAD0234:EEADannot) 0.746 0.415 5.015 0.901 0.903 272 424 185 89 127 219.400
; 1_m2_assembly_2 versus BHLH91_MYC2B_B73_1_m1_EEAD0234_EEADannot (BHLH91_MYC2B_B73_1_m1:EEAD0234:EEADannot); m=5/61; ncol2=15; w=-5; offset=-5; strand=D; shift=0; score= 219.4; mayrwkwaaCAYGTG--- ; cor=0.746; Ncor=0.415; logoDP=5.015; NsEucl=0.901; NSW=0.903; rcor=272; rNcor=424; rlogoDP=185; rNsEucl=89; rNSW=127; rank_mean=219.400; match_rank= a 25 53 18 47 30 14 30 57 57 23 98 0 20 2 0 0 0 0 c 47 12 43 2 6 6 8 12 16 77 0 74 0 1 0 0 0 0 g 12 17 4 34 1 27 14 7 17 0 0 0 80 0 95 0 0 0 t 16 18 35 17 63 53 48 24 10 0 2 26 0 97 5 0 0 0

AT1G29160_M0646_1.02_CISBP_shift6 (AT1G29160:M0646_1.02:CISBP) 0.763 0.470 4.392 0.888 0.899 220 333 210 197 137 219.400
; 1_m2_assembly_2 versus AT1G29160_M0646_1.02_CISBP (AT1G29160:M0646_1.02:CISBP); m=6/61; ncol2=8; w=0; offset=1; strand=D; shift=6; score= 219.4; ------rwWAAmGT---- ; cor=0.763; Ncor=0.470; logoDP=4.392; NsEucl=0.888; NSW=0.899; rcor=220; rNcor=333; rlogoDP=210; rNsEucl=197; rNSW=137; rank_mean=219.400; match_rank= a 0 0 0 0 0 0 25 61 27 100 91 41 5 6 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 54 0 12 0 0 0 0 g 0 0 0 0 0 0 58 0 0 0 9 0 95 0 0 0 0 0 t 0 0 0 0 0 0 17 39 73 0 0 5 0 82 0 0 0 0

ZCW32_M0153_1.02_CISBP_shift7 (ZCW32:M0153_1.02:CISBP) 0.749 0.518 3.204 0.892 0.895 265 267 271 147 149 219.800
; 1_m2_assembly_2 versus ZCW32_M0153_1.02_CISBP (ZCW32:M0153_1.02:CISBP); m=7/61; ncol2=9; w=0; offset=2; strand=D; shift=7; score= 219.8; -------sscACGTGs-- ; cor=0.749; Ncor=0.518; logoDP=3.204; NsEucl=0.892; NSW=0.895; rcor=265; rNcor=267; rlogoDP=271; rNsEucl=147; rNSW=149; rank_mean=219.800; match_rank= a 0 0 0 0 0 0 0 23 22 20 69 2 16 2 1 19 0 0 c 0 0 0 0 0 0 0 27 30 52 10 76 0 4 4 34 0 0 g 0 0 0 0 0 0 0 29 26 13 14 3 83 0 93 26 0 0 t 0 0 0 0 0 0 0 21 22 15 7 19 1 94 2 21 0 0

BIM1_MA0964.1_JASPAR_shift8 (BIM1:MA0964.1:JASPAR) 0.719 0.553 3.369 0.898 0.895 360 224 267 113 148 222.400
; 1_m2_assembly_2 versus BIM1_MA0964.1_JASPAR (BIM1:MA0964.1:JASPAR); m=8/61; ncol2=10; w=0; offset=3; strand=D; shift=8; score= 222.4; --------bcaCGTGmyv ; cor=0.719; Ncor=0.553; logoDP=3.369; NsEucl=0.898; NSW=0.895; rcor=360; rNcor=224; rlogoDP=267; rNsEucl=113; rNSW=148; rank_mean=222.400; match_rank= a 0 0 0 0 0 0 0 0 219 126 582 59 140 1 3 375 147 257 c 0 0 0 0 0 0 0 0 250 655 101 766 62 23 2 301 344 262 g 0 0 0 0 0 0 0 0 281 101 184 23 795 0 990 148 242 257 t 0 0 0 0 0 0 0 0 250 118 132 152 3 976 6 176 268 225

BHLH91_MYC2B_Mo17_1_EEAD0235_EEADannot_shift0 (BHLH91_MYC2B_Mo17_1:EEAD0235:EEADannot) 0.744 0.413 5.182 0.901 0.902 282 426 182 91 131 222.400
; 1_m2_assembly_2 versus BHLH91_MYC2B_Mo17_1_EEAD0235_EEADannot (BHLH91_MYC2B_Mo17_1:EEAD0235:EEADannot); m=9/61; ncol2=15; w=-5; offset=-5; strand=D; shift=0; score= 222.4; cayrwkwaaCAYGTG--- ; cor=0.744; Ncor=0.413; logoDP=5.182; NsEucl=0.901; NSW=0.902; rcor=282; rNcor=426; rlogoDP=182; rNsEucl=91; rNSW=131; rank_mean=222.400; match_rank= a 22 52 17 42 27 17 26 50 47 16 98 0 18 0 0 0 0 0 c 50 14 45 4 8 7 11 12 21 84 0 74 0 1 0 0 0 0 g 13 18 5 37 4 29 17 14 17 0 0 0 82 0 97 0 0 0 t 15 16 33 17 61 47 46 24 15 0 2 26 0 99 3 0 0 0

LOC_Os02g49560_M0327_1.02_CISBP_shift6 (LOC_Os02g49560:M0327_1.02:CISBP) 0.701 0.593 5.710 0.897 0.883 447 172 167 119 219 224.800
; 1_m2_assembly_2 versus LOC_Os02g49560_M0327_1.02_CISBP (LOC_Os02g49560:M0327_1.02:CISBP); m=10/61; ncol2=11; w=0; offset=1; strand=D; shift=6; score= 224.8; ------tkcCACGTGwy- ; cor=0.701; Ncor=0.593; logoDP=5.710; NsEucl=0.897; NSW=0.883; rcor=447; rNcor=172; rlogoDP=167; rNsEucl=119; rNSW=219; rank_mean=224.800; match_rank= a 0 0 0 0 0 0 22 18 20 0 100 0 0 0 3 27 21 0 c 0 0 0 0 0 0 23 18 64 93 0 100 0 0 22 7 29 0 g 0 0 0 0 0 0 22 39 4 7 0 0 100 0 73 19 21 0 t 0 0 0 0 0 0 33 25 12 0 0 0 0 100 2 47 29 0

WRKY15_MA1076.3_JASPAR_shift5 (WRKY15:MA1076.3:JASPAR) 0.782 0.481 4.319 0.882 0.889 171 309 219 248 184 226.200
; 1_m2_assembly_2 versus WRKY15_MA1076.3_JASPAR (WRKY15:MA1076.3:JASPAR); m=11/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 226.2; -----rGTCAACG----- ; cor=0.782; Ncor=0.481; logoDP=4.319; NsEucl=0.882; NSW=0.889; rcor=171; rNcor=309; rlogoDP=219; rNsEucl=248; rNSW=184; rank_mean=226.200; match_rank= a 0 0 0 0 0 583 15 2 9 1221 1218 65 100 0 0 0 0 0 c 0 0 0 0 0 58 7 8 1222 8 3 1088 88 0 0 0 0 0 g 0 0 0 0 0 515 1210 3 2 4 11 8 893 0 0 0 0 0 t 0 0 0 0 0 84 8 1227 7 7 8 79 159 0 0 0 0 0

WRKY30_MA1083.3_JASPAR_shift4 (WRKY30:MA1083.3:JASPAR) 0.791 0.452 4.618 0.880 0.886 156 355 200 259 203 234.600
; 1_m2_assembly_2 versus WRKY30_MA1083.3_JASPAR (WRKY30:MA1083.3:JASPAR); m=12/61; ncol2=9; w=-1; offset=-1; strand=D; shift=4; score= 234.6; ----arGTCAACG----- ; cor=0.791; Ncor=0.452; logoDP=4.618; NsEucl=0.880; NSW=0.886; rcor=156; rNcor=355; rlogoDP=200; rNsEucl=259; rNSW=203; rank_mean=234.600; match_rank= a 0 0 0 0 1385 1530 26 7 16 2524 2521 56 125 0 0 0 0 0 c 0 0 0 0 269 65 11 7 2526 9 11 2387 176 0 0 0 0 0 g 0 0 0 0 366 885 2498 3 6 5 8 19 1992 0 0 0 0 0 t 0 0 0 0 534 74 19 2537 6 16 14 92 261 0 0 0 0 0

GBF1_MA2389.1_JASPAR_shift10 (GBF1:MA2389.1:JASPAR) 0.788 0.425 3.740 0.883 0.905 161 407 254 237 119 235.600
; 1_m2_assembly_2 versus GBF1_MA2389.1_JASPAR (GBF1:MA2389.1:JASPAR); m=13/61; ncol2=7; w=0; offset=5; strand=D; shift=10; score= 235.6; ----------ACGTGkm- ; cor=0.788; Ncor=0.425; logoDP=3.740; NsEucl=0.883; NSW=0.905; rcor=161; rNcor=407; rlogoDP=254; rNsEucl=237; rNSW=119; rank_mean=235.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 863 16 57 20 45 0 279 0 c 0 0 0 0 0 0 0 0 0 0 35 783 135 26 2 51 535 0 g 0 0 0 0 0 0 0 0 0 0 54 111 756 4 954 610 102 0 t 0 0 0 0 0 0 0 0 0 0 47 89 49 948 0 338 81 0

BEE2_M0161_1.02_CISBP_rc_shift7 (BEE2:M0161_1.02:CISBP_rc) 0.710 0.546 3.424 0.896 0.892 403 233 265 124 168 238.600
; 1_m2_assembly_2 versus BEE2_M0161_1.02_CISBP_rc (BEE2:M0161_1.02:CISBP_rc); m=14/61; ncol2=10; w=0; offset=2; strand=R; shift=7; score= 238.6; -------hgCACGTGcw- ; cor=0.710; Ncor=0.546; logoDP=3.424; NsEucl=0.896; NSW=0.892; rcor=403; rNcor=233; rlogoDP=265; rNsEucl=124; rNSW=168; rank_mean=238.600; match_rank= a 0 0 0 0 0 0 0 26 21 14 89 2 16 8 10 22 26 0 c 0 0 0 0 0 0 0 25 23 72 0 82 0 3 4 34 24 0 g 0 0 0 0 0 0 0 24 34 4 3 0 82 0 72 23 24 0 t 0 0 0 0 0 0 0 25 22 10 8 16 2 89 14 21 26 0

MYC3_M0165_1.02_CISBP_rc_shift5 (MYC3:M0165_1.02:CISBP_rc) 0.717 0.552 0.164 0.903 0.905 370 228 400 83 115 239.200
; 1_m2_assembly_2 versus MYC3_M0165_1.02_CISBP_rc (MYC3:M0165_1.02:CISBP_rc); m=15/61; ncol2=10; w=0; offset=0; strand=R; shift=5; score= 239.2; -----wwvsCACgtg--- ; cor=0.717; Ncor=0.552; logoDP=0.164; NsEucl=0.903; NSW=0.905; rcor=370; rNcor=228; rlogoDP=400; rNsEucl=83; rNSW=115; rank_mean=239.200; match_rank= a 0 0 0 0 0 27 30 26 23 18 87 8 22 23 12 0 0 0 c 0 0 0 0 0 20 24 26 25 73 0 74 8 12 6 0 0 0 g 0 0 0 0 0 23 21 25 35 0 12 0 66 7 63 0 0 0 t 0 0 0 0 0 30 25 23 17 9 1 18 4 58 19 0 0 0

WRKY31_MA1307.3_JASPAR_shift5 (WRKY31:MA1307.3:JASPAR) 0.778 0.478 4.430 0.878 0.881 186 315 208 271 227 241.400
; 1_m2_assembly_2 versus WRKY31_MA1307.3_JASPAR (WRKY31:MA1307.3:JASPAR); m=16/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 241.4; -----rGTCAACG----- ; cor=0.778; Ncor=0.478; logoDP=4.430; NsEucl=0.878; NSW=0.881; rcor=186; rNcor=315; rlogoDP=208; rNsEucl=271; rNSW=227; rank_mean=241.400; match_rank= a 0 0 0 0 0 134 2 0 2 297 290 16 29 0 0 0 0 0 c 0 0 0 0 0 4 0 0 296 1 0 264 11 0 0 0 0 0 g 0 0 0 0 0 153 296 0 1 1 3 4 240 0 0 0 0 0 t 0 0 0 0 0 8 1 299 0 0 6 15 19 0 0 0 0 0

BEE2_MA0956.1_JASPAR_shift7 (BEE2:MA0956.1:JASPAR) 0.708 0.545 3.437 0.896 0.891 415 236 263 127 173 242.800
; 1_m2_assembly_2 versus BEE2_MA0956.1_JASPAR (BEE2:MA0956.1:JASPAR); m=17/61; ncol2=10; w=0; offset=2; strand=D; shift=7; score= 242.8; -------hgCACGTGcd- ; cor=0.708; Ncor=0.545; logoDP=3.437; NsEucl=0.896; NSW=0.891; rcor=415; rNcor=236; rlogoDP=263; rNsEucl=127; rNSW=173; rank_mean=242.800; match_rank= a 0 0 0 0 0 0 0 256 211 136 893 23 157 74 104 218 255 0 c 0 0 0 0 0 0 0 253 229 722 0 820 0 33 38 342 236 0 g 0 0 0 0 0 0 0 236 342 38 33 0 820 0 722 229 253 0 t 0 0 0 0 0 0 0 255 218 104 74 157 23 893 136 211 256 0

AtbZIP63_M0272_1.02_CISBP_rc_shift7 (AtbZIP63:M0272_1.02:CISBP_rc) 0.707 0.556 1.545 0.899 0.888 419 217 313 105 190 248.800
; 1_m2_assembly_2 versus AtbZIP63_M0272_1.02_CISBP_rc (AtbZIP63:M0272_1.02:CISBP_rc); m=18/61; ncol2=12; w=0; offset=2; strand=R; shift=7; score= 248.8; -------gcCACGTsagc ; cor=0.707; Ncor=0.556; logoDP=1.545; NsEucl=0.899; NSW=0.888; rcor=419; rNcor=217; rlogoDP=313; rNsEucl=105; rNSW=190; rank_mean=248.800; match_rank= a 0 0 0 0 0 0 0 23 20 5 94 0 0 0 0 66 19 20 c 0 0 0 0 0 0 0 23 60 78 2 100 0 0 64 2 19 40 g 0 0 0 0 0 0 0 31 6 12 2 0 100 0 36 15 43 20 t 0 0 0 0 0 0 0 23 14 5 2 0 0 100 0 17 19 20

1500010105_M0364_1.02_CISBP_shift5 (1500010105:M0364_1.02:CISBP) 0.707 0.543 4.919 0.890 0.879 420 237 192 165 240 250.800
; 1_m2_assembly_2 versus 1500010105_M0364_1.02_CISBP (1500010105:M0364_1.02:CISBP); m=19/61; ncol2=10; w=0; offset=0; strand=D; shift=5; score= 250.8; -----wyGCCACGTG--- ; cor=0.707; Ncor=0.543; logoDP=4.919; NsEucl=0.890; NSW=0.879; rcor=420; rNcor=237; rlogoDP=192; rNsEucl=165; rNSW=240; rank_mean=250.800; match_rank= a 0 0 0 0 0 25 8 12 21 6 100 3 4 0 6 0 0 0 c 0 0 0 0 0 22 46 2 79 92 0 91 10 6 9 0 0 0 g 0 0 0 0 0 24 6 78 0 0 0 6 84 0 79 0 0 0 t 0 0 0 0 0 29 40 8 0 2 0 0 2 94 6 0 0 0

WRKY47_MA1312.2_JASPAR_rc_shift4 (WRKY47:MA1312.2:JASPAR_rc) 0.786 0.449 1.080 0.884 0.892 165 362 329 234 167 251.400
; 1_m2_assembly_2 versus WRKY47_MA1312.2_JASPAR_rc (WRKY47:MA1312.2:JASPAR_rc); m=20/61; ncol2=9; w=-1; offset=-1; strand=R; shift=4; score= 251.4; ----wrGTCAACG----- ; cor=0.786; Ncor=0.449; logoDP=1.080; NsEucl=0.884; NSW=0.892; rcor=165; rNcor=362; rlogoDP=329; rNsEucl=234; rNSW=167; rank_mean=251.400; match_rank= a 0 0 0 0 38 53 0 1 0 83 87 21 0 0 0 0 0 0 c 0 0 0 0 3 1 0 13 88 0 1 65 2 0 0 0 0 0 g 0 0 0 0 13 33 88 0 0 0 0 0 80 0 0 0 0 0 t 0 0 0 0 34 1 0 74 0 5 0 2 6 0 0 0 0 0

BZIP63_MA1745.1_JASPAR_rc_shift7 (BZIP63:MA1745.1:JASPAR_rc) 0.705 0.554 1.542 0.899 0.887 424 220 314 109 195 252.400
; 1_m2_assembly_2 versus BZIP63_MA1745.1_JASPAR_rc (BZIP63:MA1745.1:JASPAR_rc); m=21/61; ncol2=12; w=0; offset=2; strand=R; shift=7; score= 252.4; -------gcCACGTsagc ; cor=0.705; Ncor=0.554; logoDP=1.542; NsEucl=0.899; NSW=0.887; rcor=424; rNcor=220; rlogoDP=314; rNsEucl=109; rNSW=195; rank_mean=252.400; match_rank= a 0 0 0 0 0 0 0 229 201 47 937 0 0 0 0 665 188 203 c 0 0 0 0 0 0 0 229 597.6 783 21 1000 0.04 0.04 644 21 188 390 g 0 0 0 0 0 0 0 313 62 123.19 21 0.04 1000 0.04 356 148.14 437 203 t 0 0 0 0 0 0 0 229 139 47 21 0.04 0.04 1000 0.04 166 188 203

WRKY45_MA1087.1_JASPAR_rc_shift5 (WRKY45:MA1087.1:JASPAR_rc) 0.783 0.482 2.812 0.878 0.881 169 308 284 273 229 252.600
; 1_m2_assembly_2 versus WRKY45_MA1087.1_JASPAR_rc (WRKY45:MA1087.1:JASPAR_rc); m=22/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 252.6; -----rGTCAACG----- ; cor=0.783; Ncor=0.482; logoDP=2.812; NsEucl=0.878; NSW=0.881; rcor=169; rNcor=308; rlogoDP=284; rNsEucl=273; rNSW=229; rank_mean=252.600; match_rank= a 0 0 0 0 0 450 5 4 7 982 974 89 40 0 0 0 0 0 c 0 0 0 0 0 11 3 2 985 11 2 892 25 0 0 0 0 0 g 0 0 0 0 0 531 986 5 3 3 18 4 875 0 0 0 0 0 t 0 0 0 0 0 8 6 988 4 4 6 15 60 0 0 0 0 0

ADOF2_M0649_1.02_CISBP_shift6 (ADOF2:M0649_1.02:CISBP) 0.734 0.452 1.754 0.890 0.902 320 357 303 167 129 255.200
; 1_m2_assembly_2 versus ADOF2_M0649_1.02_CISBP (ADOF2:M0649_1.02:CISBP); m=23/61; ncol2=8; w=0; offset=1; strand=D; shift=6; score= 255.2; ------srwAAmGy---- ; cor=0.734; Ncor=0.452; logoDP=1.754; NsEucl=0.890; NSW=0.902; rcor=320; rNcor=357; rlogoDP=303; rNsEucl=167; rNSW=129; rank_mean=255.200; match_rank= a 0 0 0 0 0 0 24 31 35 81 80 50 11 20 0 0 0 0 c 0 0 0 0 0 0 26 20 14 7 9 40 3 25 0 0 0 0 g 0 0 0 0 0 0 27 25 17 4 2 2 78 21 0 0 0 0 t 0 0 0 0 0 0 23 24 34 8 9 8 8 34 0 0 0 0

WRKY25_MA1081.3_JASPAR_shift5 (WRKY25:MA1081.3:JASPAR) 0.764 0.470 4.247 0.877 0.880 216 332 224 276 234 256.400
; 1_m2_assembly_2 versus WRKY25_MA1081.3_JASPAR (WRKY25:MA1081.3:JASPAR); m=24/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 256.4; -----rGTCAACG----- ; cor=0.764; Ncor=0.470; logoDP=4.247; NsEucl=0.877; NSW=0.880; rcor=216; rNcor=332; rlogoDP=224; rNsEucl=276; rNSW=234; rank_mean=256.400; match_rank= a 0 0 0 0 0 444 9 3 4 1215 1201 130 149 0 0 0 0 0 c 0 0 0 0 0 24 7 7 1217 4 5 1002 53 0 0 0 0 0 g 0 0 0 0 0 731 1202 0 4 4 13 18 927 0 0 0 0 0 t 0 0 0 0 0 29 10 1218 3 5 9 78 99 0 0 0 0 0

GT-3a_MA1207.2_JASPAR_rc_shift1 (GT-3a:MA1207.2:JASPAR_rc) 0.744 0.438 0.593 0.897 0.893 281 389 343 122 160 259.000
; 1_m2_assembly_2 versus GT-3a_MA1207.2_JASPAR_rc (GT-3a:MA1207.2:JASPAR_rc); m=25/61; ncol2=14; w=-4; offset=-4; strand=R; shift=1; score= 259; -ahwWtwwaCACGTG--- ; cor=0.744; Ncor=0.438; logoDP=0.593; NsEucl=0.897; NSW=0.893; rcor=281; rNcor=389; rlogoDP=343; rNsEucl=122; rNSW=160; rank_mean=259.000; match_rank= a 0 213 134 196 108 87 133 126 201 47 371 0 43 0 0 0 0 0 c 0 36 104 4 0 14 40 57 76 324 0 371 0 0 0 0 0 0 g 0 42 3 64 4 66 15 82 40 0 0 0 328 0 360 0 0 0 t 0 80 130 107 259 204 183 106 54 0 0 0 0 371 11 0 0 0

AT1G18960_UN0826.1_JASPAR_shift5 (AT1G18960:UN0826.1:JASPAR) 0.798 0.430 4.092 0.871 0.884 143 398 232 328 209 262.000
; 1_m2_assembly_2 versus AT1G18960_UN0826.1_JASPAR (AT1G18960:UN0826.1:JASPAR); m=26/61; ncol2=7; w=0; offset=0; strand=D; shift=5; score= 262; -----CAmCAAC------ ; cor=0.798; Ncor=0.430; logoDP=4.092; NsEucl=0.871; NSW=0.884; rcor=143; rNcor=398; rlogoDP=232; rNsEucl=328; rNSW=209; rank_mean=262.000; match_rank= a 0 0 0 0 0 0 959 584 0 959 929 0 0 0 0 0 0 0 c 0 0 0 0 0 1000 40 356 976 0 70 994 0 0 0 0 0 0 g 0 0 0 0 0 0 0 58 23 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 40 0 5 0 0 0 0 0 0

WRKY23_MA1080.1_JASPAR_shift5 (WRKY23:MA1080.1:JASPAR) 0.765 0.471 4.594 0.875 0.875 215 331 201 299 272 263.600
; 1_m2_assembly_2 versus WRKY23_MA1080.1_JASPAR (WRKY23:MA1080.1:JASPAR); m=27/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 263.6; -----RGTCAACG----- ; cor=0.765; Ncor=0.471; logoDP=4.594; NsEucl=0.875; NSW=0.875; rcor=215; rNcor=331; rlogoDP=201; rNsEucl=299; rNSW=272; rank_mean=263.600; match_rank= a 0 0 0 0 0 698 1 1 1 998 998 167 143 0 0 0 0 0 c 0 0 0 0 0 1 1 1 998 1 1 831 143 0 0 0 0 0 g 0 0 0 0 0 300 998 1 1 1 1 1 712 0 0 0 0 0 t 0 0 0 0 0 1 1 998 1 1 1 1 1 0 0 0 0 0

WRKY23_M1689_1.02_CISBP_shift5 (WRKY23:M1689_1.02:CISBP) 0.765 0.471 4.687 0.875 0.874 214 330 197 302 281 264.800
; 1_m2_assembly_2 versus WRKY23_M1689_1.02_CISBP (WRKY23:M1689_1.02:CISBP); m=28/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 264.8; -----RGTCAACG----- ; cor=0.765; Ncor=0.471; logoDP=4.687; NsEucl=0.875; NSW=0.874; rcor=214; rNcor=330; rlogoDP=197; rNsEucl=302; rNSW=281; rank_mean=264.800; match_rank= a 0 0 0 0 0 70 0 0 0 100 100 17 14 0 0 0 0 0 c 0 0 0 0 0 0 0 0 100 0 0 83 14 0 0 0 0 0 g 0 0 0 0 0 30 100 0 0 0 0 0 72 0 0 0 0 0 t 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0

WRKY6_MA1300.2_JASPAR_rc_shift5 (WRKY6:MA1300.2:JASPAR_rc) 0.773 0.476 3.013 0.875 0.875 196 319 276 297 269 271.400
; 1_m2_assembly_2 versus WRKY6_MA1300.2_JASPAR_rc (WRKY6:MA1300.2:JASPAR_rc); m=29/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 271.4; -----RGTCAACG----- ; cor=0.773; Ncor=0.476; logoDP=3.013; NsEucl=0.875; NSW=0.875; rcor=196; rNcor=319; rlogoDP=276; rNsEucl=297; rNSW=269; rank_mean=271.400; match_rank= a 0 0 0 0 0 200 0 0 0 285 285 22 28 0 0 0 0 0 c 0 0 0 0 0 0 0 0 285 0 0 262 21 0 0 0 0 0 g 0 0 0 0 0 85 285 0 0 0 0 0 195 0 0 0 0 0 t 0 0 0 0 0 0 0 285 0 0 0 1 41 0 0 0 0 0

WRKY42_MA1310.2_JASPAR_rc_shift5 (WRKY42:MA1310.2:JASPAR_rc) 0.769 0.473 3.010 0.875 0.875 202 324 277 296 265 272.800
; 1_m2_assembly_2 versus WRKY42_MA1310.2_JASPAR_rc (WRKY42:MA1310.2:JASPAR_rc); m=30/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 272.8; -----rGTCAACg----- ; cor=0.769; Ncor=0.473; logoDP=3.010; NsEucl=0.875; NSW=0.875; rcor=202; rNcor=324; rlogoDP=277; rNsEucl=296; rNSW=265; rank_mean=272.800; match_rank= a 0 0 0 0 0 206 0 0 2 309 309 7 46 0 0 0 0 0 c 0 0 0 0 0 7 0 0 307 0 0 301 28 0 0 0 0 0 g 0 0 0 0 0 90 309 0 0 0 0 0 184 0 0 0 0 0 t 0 0 0 0 0 6 0 309 0 0 0 1 51 0 0 0 0 0

POC1_M0151_1.02_CISBP_shift9 (POC1:M0151_1.02:CISBP) 0.772 0.416 4.034 0.872 0.885 199 419 234 320 204 275.200
; 1_m2_assembly_2 versus POC1_M0151_1.02_CISBP (POC1:M0151_1.02:CISBP); m=31/61; ncol2=7; w=0; offset=4; strand=D; shift=9; score= 275.2; ---------cAYGTGs-- ; cor=0.772; Ncor=0.416; logoDP=4.034; NsEucl=0.872; NSW=0.885; rcor=199; rNcor=419; rlogoDP=234; rNsEucl=320; rNSW=204; rank_mean=275.200; match_rank= a 0 0 0 0 0 0 0 0 0 18 73 0 0 0 1 22 0 0 c 0 0 0 0 0 0 0 0 0 55 0 71 0 1 1 30 0 0 g 0 0 0 0 0 0 0 0 0 14 17 0 88 0 98 35 0 0 t 0 0 0 0 0 0 0 0 0 13 10 29 12 99 0 13 0 0

AT3G42860_UN0354.2_JASPAR_shift4 (AT3G42860:UN0354.2:JASPAR) 0.768 0.439 4.458 0.874 0.874 205 386 205 304 283 276.600
; 1_m2_assembly_2 versus AT3G42860_UN0354.2_JASPAR (AT3G42860:UN0354.2:JASPAR); m=32/61; ncol2=9; w=-1; offset=-1; strand=D; shift=4; score= 276.6; ----aAGTCAACg----- ; cor=0.768; Ncor=0.439; logoDP=4.458; NsEucl=0.874; NSW=0.874; rcor=205; rNcor=386; rlogoDP=205; rNsEucl=304; rNSW=283; rank_mean=276.600; match_rank= a 0 0 0 0 804 1072 9 0 10 1277 1279 66 122 0 0 0 0 0 c 0 0 0 0 100 26 6 2 1271 5 1 1136 114 0 0 0 0 0 g 0 0 0 0 170 166 1268 2 1 2 3 6 871 0 0 0 0 0 t 0 0 0 0 213 23 4 1283 5 3 4 79 180 0 0 0 0 0

WRKY65_MA1302.2_JASPAR_shift3 (WRKY65:MA1302.2:JASPAR) 0.773 0.413 4.699 0.875 0.875 194 429 196 300 276 279.000
; 1_m2_assembly_2 versus WRKY65_MA1302.2_JASPAR (WRKY65:MA1302.2:JASPAR); m=33/61; ncol2=10; w=-2; offset=-2; strand=D; shift=3; score= 279; ---aAAGTCAACG----- ; cor=0.773; Ncor=0.413; logoDP=4.699; NsEucl=0.875; NSW=0.875; rcor=194; rNcor=429; rlogoDP=196; rNsEucl=300; rNSW=276; rank_mean=279.000; match_rank= a 0 0 0 380 418 458 0 0 0 600 599 36 50 0 0 0 0 0 c 0 0 0 43 25 6 0 1 600 0 0 542 38 0 0 0 0 0 g 0 0 0 84 34 127 600 0 0 0 0 0 419 0 0 0 0 0 t 0 0 0 93 123 9 0 599 0 0 1 22 93 0 0 0 0 0

AT3G45610_M0650_1.02_CISBP_shift6 (AT3G45610:M0650_1.02:CISBP) 0.769 0.473 0.345 0.877 0.879 203 325 359 278 238 280.600
; 1_m2_assembly_2 versus AT3G45610_M0650_1.02_CISBP (AT3G45610:M0650_1.02:CISBP); m=34/61; ncol2=8; w=0; offset=1; strand=D; shift=6; score= 280.6; ------swwaacgw---- ; cor=0.769; Ncor=0.473; logoDP=0.345; NsEucl=0.877; NSW=0.879; rcor=203; rNcor=325; rlogoDP=359; rNsEucl=278; rNSW=238; rank_mean=280.600; match_rank= a 0 0 0 0 0 0 24 28 26 50 50 24 24 27 0 0 0 0 c 0 0 0 0 0 0 26 24 20 14 17 50 7 22 0 0 0 0 g 0 0 0 0 0 0 26 23 20 17 17 4 54 22 0 0 0 0 t 0 0 0 0 0 0 24 25 34 19 16 22 15 29 0 0 0 0

WRKY38_MA1084.1_JASPAR_rc_shift5 (WRKY38:MA1084.1:JASPAR_rc) 0.746 0.459 2.401 0.879 0.882 275 345 292 269 223 280.800
; 1_m2_assembly_2 versus WRKY38_MA1084.1_JASPAR_rc (WRKY38:MA1084.1:JASPAR_rc); m=35/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 280.8; -----rGTCAACg----- ; cor=0.746; Ncor=0.459; logoDP=2.401; NsEucl=0.879; NSW=0.882; rcor=275; rNcor=345; rlogoDP=292; rNsEucl=269; rNSW=223; rank_mean=280.800; match_rank= a 0 0 0 0 0 289 20 18 14 930 923 55 104 0 0 0 0 0 c 0 0 0 0 0 17 13 10 961 39 21 849 73 0 0 0 0 0 g 0 0 0 0 0 679 951 17 16 23 30 28 672 0 0 0 0 0 t 0 0 0 0 0 15 16 955 9 8 26 69 152 0 0 0 0 0

At3g59060_MA0562.1_JASPAR_rc_shift8 (At3g59060:MA0562.1:JASPAR_rc) 0.756 0.465 5.937 0.870 0.865 241 339 155 343 333 282.200
; 1_m2_assembly_2 versus At3g59060_MA0562.1_JASPAR_rc (At3g59060:MA0562.1:JASPAR_rc); m=36/61; ncol2=8; w=0; offset=3; strand=R; shift=8; score= 282.2; --------sCAYGTGR-- ; cor=0.756; Ncor=0.465; logoDP=5.937; NsEucl=0.870; NSW=0.865; rcor=241; rNcor=339; rlogoDP=155; rNsEucl=343; rNSW=333; rank_mean=282.200; match_rank= a 0 0 0 0 0 0 0 0 30 0 286 0 0 0 0 208 0 0 c 0 0 0 0 0 0 0 0 161 286 0 195 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 95 0 0 0 286 0 286 78 0 0 t 0 0 0 0 0 0 0 0 0 0 0 91 0 286 0 0 0 0

bHLH18_MA1361.1_JASPAR_rc_shift7 (bHLH18:MA1361.1:JASPAR_rc) 0.715 0.414 0.593 0.899 0.888 375 425 344 108 192 288.800
; 1_m2_assembly_2 versus bHLH18_MA1361.1_JASPAR_rc (bHLH18:MA1361.1:JASPAR_rc); m=37/61; ncol2=17; w=0; offset=2; strand=R; shift=7; score= 288.8; -------rmCACGTGdww ; cor=0.715; Ncor=0.414; logoDP=0.593; NsEucl=0.899; NSW=0.888; rcor=375; rNcor=425; rlogoDP=344; rNsEucl=108; rNSW=192; rank_mean=288.800; match_rank= a 0 0 0 0 0 0 0 68 59 4 191 0 2 4 0 64 88 97 c 0 0 0 0 0 0 0 34 79 197 0 192 0 4 0 15 31 29 g 0 0 0 0 0 0 0 60 34 0 3 0 199 0 190 61 27 15 t 0 0 0 0 0 0 0 39 29 0 7 9 0 193 11 61 55 60

WRKY46_MA1296.2_JASPAR_rc_shift3 (WRKY46:MA1296.2:JASPAR_rc) 0.779 0.415 0.268 0.878 0.881 177 420 375 272 228 294.400
; 1_m2_assembly_2 versus WRKY46_MA1296.2_JASPAR_rc (WRKY46:MA1296.2:JASPAR_rc); m=38/61; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score= 294.4; ---AAAGTCAAMG----- ; cor=0.779; Ncor=0.415; logoDP=0.268; NsEucl=0.878; NSW=0.881; rcor=177; rNcor=420; rlogoDP=375; rNsEucl=272; rNSW=228; rank_mean=294.400; match_rank= a 0 0 0 15 18 19 0 0 0 22 22 6 0 0 0 0 0 0 c 0 0 0 0 1 0 0 4 22 0 0 16 1 0 0 0 0 0 g 0 0 0 4 3 3 22 0 0 0 0 0 19 0 0 0 0 0 t 0 0 0 3 0 0 0 18 0 0 0 0 2 0 0 0 0 0

WRKY12_MA1075.1_JASPAR_rc_shift5 (WRKY12:MA1075.1:JASPAR_rc) 0.738 0.454 2.528 0.876 0.878 305 353 290 283 243 294.800
; 1_m2_assembly_2 versus WRKY12_MA1075.1_JASPAR_rc (WRKY12:MA1075.1:JASPAR_rc); m=39/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 294.8; -----GGTCAACG----- ; cor=0.738; Ncor=0.454; logoDP=2.528; NsEucl=0.876; NSW=0.878; rcor=305; rNcor=353; rlogoDP=290; rNsEucl=283; rNSW=243; rank_mean=294.800; match_rank= a 0 0 0 0 0 151 16 14 33 946 913 78 46 0 0 0 0 0 c 0 0 0 0 0 101 5 10 954 29 5 819 76 0 0 0 0 0 g 0 0 0 0 0 722 949 6 6 15 62 33 707 0 0 0 0 0 t 0 0 0 0 0 25 29 971 8 10 20 70 172 0 0 0 0 0

BHLH122_MA1739.2_JASPAR_shift8 (BHLH122:MA1739.2:JASPAR) 0.776 0.418 6.382 0.859 0.861 189 416 131 395 347 295.600
; 1_m2_assembly_2 versus BHLH122_MA1739.2_JASPAR (BHLH122:MA1739.2:JASPAR); m=40/61; ncol2=7; w=0; offset=3; strand=D; shift=8; score= 295.6; --------CmACTTG--- ; cor=0.776; Ncor=0.418; logoDP=6.382; NsEucl=0.859; NSW=0.861; rcor=189; rNcor=416; rlogoDP=131; rNsEucl=395; rNSW=347; rank_mean=295.600; match_rank= a 0 0 0 0 0 0 0 0 12 551 1000 0 0 2 2 0 0 0 c 0 0 0 0 0 0 0 0 988 436 0 995 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 5 2 0 998 0 0 0 t 0 0 0 0 0 0 0 0 0 13 0 0 998 998 0 0 0 0

WRKY14_MA1314.2_JASPAR_shift3 (WRKY14:MA1314.2:JASPAR) 0.765 0.408 4.726 0.872 0.868 212 437 195 326 312 296.400
; 1_m2_assembly_2 versus WRKY14_MA1314.2_JASPAR (WRKY14:MA1314.2:JASPAR); m=41/61; ncol2=10; w=-2; offset=-2; strand=D; shift=3; score= 296.4; ---AAAGTCAACg----- ; cor=0.765; Ncor=0.408; logoDP=4.726; NsEucl=0.872; NSW=0.868; rcor=212; rNcor=437; rlogoDP=195; rNsEucl=326; rNSW=312; rank_mean=296.400; match_rank= a 0 0 0 426 454 509 0 0 0 598 598 36 53 0 0 0 0 0 c 0 0 0 38 22 1 0 0 598 0 0 549 54 0 0 0 0 0 g 0 0 0 51 24 84 598 0 0 0 0 0 397 0 0 0 0 0 t 0 0 0 83 98 4 0 598 0 0 0 13 94 0 0 0 0 0

WRKY55_MA1305.2_JASPAR_rc_shift4 (WRKY55:MA1305.2:JASPAR_rc) 0.771 0.440 1.716 0.874 0.873 200 380 307 312 293 298.400
; 1_m2_assembly_2 versus WRKY55_MA1305.2_JASPAR_rc (WRKY55:MA1305.2:JASPAR_rc); m=42/61; ncol2=9; w=-1; offset=-1; strand=R; shift=4; score= 298.4; ----aAGTCAACG----- ; cor=0.771; Ncor=0.440; logoDP=1.716; NsEucl=0.874; NSW=0.873; rcor=200; rNcor=380; rlogoDP=307; rNsEucl=312; rNSW=293; rank_mean=298.400; match_rank= a 0 0 0 0 389 470 0 0 0 599 599 23 54 0 0 0 0 0 c 0 0 0 0 48 1 0 0 599 0 0 543 59 0 0 0 0 0 g 0 0 0 0 72 128 599 0 0 0 0 2 415 0 0 0 0 0 t 0 0 0 0 90 0 0 599 0 0 0 31 71 0 0 0 0 0

bHLH74.ampDAP_M0179_AthalianaCistrome_shift9 (bHLH74.ampDAP:M0179:AthalianaCistrome) 0.744 0.458 6.441 0.865 0.854 283 348 130 368 370 299.800
; 1_m2_assembly_2 versus bHLH74.ampDAP_M0179_AthalianaCistrome (bHLH74.ampDAP:M0179:AthalianaCistrome); m=43/61; ncol2=8; w=0; offset=4; strand=D; shift=9; score= 299.8; ---------CACGTGAy- ; cor=0.744; Ncor=0.458; logoDP=6.441; NsEucl=0.865; NSW=0.854; rcor=283; rNcor=348; rlogoDP=130; rNsEucl=368; rNSW=370; rank_mean=299.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 87 0 7 0 0 65 0 0 c 0 0 0 0 0 0 0 0 0 87 0 87 0 0 0 20 54 0 g 0 0 0 0 0 0 0 0 0 0 0 0 80 0 87 2 3 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 30 0

WRKY20_MA1295.2_JASPAR_rc_shift5 (WRKY20:MA1295.2:JASPAR_rc) 0.745 0.458 2.973 0.874 0.873 279 347 280 313 294 302.600
; 1_m2_assembly_2 versus WRKY20_MA1295.2_JASPAR_rc (WRKY20:MA1295.2:JASPAR_rc); m=44/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 302.6; -----rGTCAAMG----- ; cor=0.745; Ncor=0.458; logoDP=2.973; NsEucl=0.874; NSW=0.873; rcor=279; rNcor=347; rlogoDP=280; rNsEucl=313; rNSW=294; rank_mean=302.600; match_rank= a 0 0 0 0 0 330 0 0 0 599 597 166 74 0 0 0 0 0 c 0 0 0 0 0 0 0 1 600 0 0 420 74 0 0 0 0 0 g 0 0 0 0 0 270 599 0 0 1 1 3 418 0 0 0 0 0 t 0 0 0 0 0 0 1 599 0 0 2 11 34 0 0 0 0 0

PIF3_MA0560.2_JASPAR_shift8 (PIF3:MA0560.2:JASPAR) 0.767 0.413 5.998 0.859 0.860 207 427 152 398 355 307.800
; 1_m2_assembly_2 versus PIF3_MA0560.2_JASPAR (PIF3:MA0560.2:JASPAR); m=45/61; ncol2=7; w=0; offset=3; strand=D; shift=8; score= 307.8; --------CCACGTG--- ; cor=0.767; Ncor=0.413; logoDP=5.998; NsEucl=0.859; NSW=0.860; rcor=207; rNcor=427; rlogoDP=152; rNsEucl=398; rNSW=355; rank_mean=307.800; match_rank= a 0 0 0 0 0 0 0 0 19 0 527 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 399 527 0 409 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 94 0 0 0 527 0 527 0 0 0 t 0 0 0 0 0 0 0 0 15 0 0 118 0 527 0 0 0 0

BZIP63_MA1745.2_JASPAR_rc_shift8 (BZIP63:MA1745.2:JASPAR_rc) 0.733 0.451 5.258 0.869 0.862 325 359 176 347 344 310.200
; 1_m2_assembly_2 versus BZIP63_MA1745.2_JASPAR_rc (BZIP63:MA1745.2:JASPAR_rc); m=46/61; ncol2=8; w=0; offset=3; strand=R; shift=8; score= 310.2; --------cCACGTsa-- ; cor=0.733; Ncor=0.451; logoDP=5.258; NsEucl=0.869; NSW=0.862; rcor=325; rNcor=359; rlogoDP=176; rNsEucl=347; rNSW=344; rank_mean=310.200; match_rank= a 0 0 0 0 0 0 0 0 201 47 937 0 0 0 0 665 0 0 c 0 0 0 0 0 0 0 0 598 783 21 1000 0 0 644 21 0 0 g 0 0 0 0 0 0 0 0 62 123 21 0 1000 0 356 148 0 0 t 0 0 0 0 0 0 0 0 139 47 21 0 0 1000 0 166 0 0

WRKY28_MA1311.3_JASPAR_shift5 (WRKY28:MA1311.3:JASPAR) 0.759 0.409 3.965 0.865 0.873 230 435 242 365 288 312.000
; 1_m2_assembly_2 versus WRKY28_MA1311.3_JASPAR (WRKY28:MA1311.3:JASPAR); m=47/61; ncol2=7; w=0; offset=0; strand=D; shift=5; score= 312; -----rGTCAAC------ ; cor=0.759; Ncor=0.409; logoDP=3.965; NsEucl=0.865; NSW=0.873; rcor=230; rNcor=435; rlogoDP=242; rNsEucl=365; rNSW=288; rank_mean=312.000; match_rank= a 0 0 0 0 0 919 21 6 12 2059 2050 158 0 0 0 0 0 0 c 0 0 0 0 0 67 11 8 2062 17 7 1730 0 0 0 0 0 0 g 0 0 0 0 0 924 2047 1 8 6 18 55 0 0 0 0 0 0 t 0 0 0 0 0 182 13 2077 10 10 17 149 0 0 0 0 0 0

NFYC2_UN0690.2_JASPAR_shift10 (NFYC2:UN0690.2:JASPAR) 0.718 0.442 3.906 0.872 0.868 366 379 244 327 313 325.800
; 1_m2_assembly_2 versus NFYC2_UN0690.2_JASPAR (NFYC2:UN0690.2:JASPAR); m=48/61; ncol2=8; w=0; offset=5; strand=D; shift=10; score= 325.8; ----------ACGTGGCA ; cor=0.718; Ncor=0.442; logoDP=3.906; NsEucl=0.872; NSW=0.868; rcor=366; rNcor=379; rlogoDP=244; rNsEucl=327; rNSW=313; rank_mean=325.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 3455 169 116 79 120 236 343 3557 c 0 0 0 0 0 0 0 0 0 0 259 4264 31 105 53 103 4053 184 g 0 0 0 0 0 0 0 0 0 0 443 87 4428 23 4421 3438 174 508 t 0 0 0 0 0 0 0 0 0 0 523 160 105 4473 86 903 110 431

OsbZIP43_UN0825.1_JASPAR_rc_shift8 (OsbZIP43:UN0825.1:JASPAR_rc) 0.767 0.413 1.947 0.862 0.867 208 428 300 380 320 327.200
; 1_m2_assembly_2 versus OsbZIP43_UN0825.1_JASPAR_rc (OsbZIP43:UN0825.1:JASPAR_rc); m=49/61; ncol2=7; w=0; offset=3; strand=R; shift=8; score= 327.2; --------cCACGTG--- ; cor=0.767; Ncor=0.413; logoDP=1.947; NsEucl=0.862; NSW=0.867; rcor=208; rNcor=428; rlogoDP=300; rNsEucl=380; rNSW=320; rank_mean=327.200; match_rank= a 0 0 0 0 0 0 0 0 200 0 999 0 0 0 25 0 0 0 c 0 0 0 0 0 0 0 0 642 927 0 999 0 0 222 0 0 0 g 0 0 0 0 0 0 0 0 42 72 0 0 999 0 726 0 0 0 t 0 0 0 0 0 0 0 0 114 0 0 0 0 999 25 0 0 0

WRKY70_MA1308.2_JASPAR_rc_shift3 (WRKY70:MA1308.2:JASPAR_rc) 0.779 0.415 0.264 0.871 0.866 178 421 377 336 325 327.400
; 1_m2_assembly_2 versus WRKY70_MA1308.2_JASPAR_rc (WRKY70:MA1308.2:JASPAR_rc); m=50/61; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score= 327.4; ---AAAGTCAACG----- ; cor=0.779; Ncor=0.415; logoDP=0.264; NsEucl=0.871; NSW=0.866; rcor=178; rNcor=421; rlogoDP=377; rNsEucl=336; rNSW=325; rank_mean=327.400; match_rank= a 0 0 0 435 493 536 0 0 0 599 599 1 28 0 0 0 0 0 c 0 0 0 37 11 3 0 0 599 0 0 584 32 0 0 0 0 0 g 0 0 0 45 24 58 599 0 0 0 0 0 464 0 0 0 0 0 t 0 0 0 82 71 2 0 599 0 0 0 14 75 0 0 0 0 0

WRKY18_WRKY18_Athamap_shift5 (WRKY18:WRKY18:Athamap) 0.716 0.440 4.400 0.870 0.865 374 381 209 342 332 327.600
; 1_m2_assembly_2 versus WRKY18_WRKY18_Athamap (WRKY18:WRKY18:Athamap); m=51/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 327.6; -----rGTCAAmG----- ; cor=0.716; Ncor=0.440; logoDP=4.400; NsEucl=0.870; NSW=0.865; rcor=374; rNcor=381; rlogoDP=209; rNsEucl=342; rNSW=332; rank_mean=327.600; match_rank= a 0 0 0 0 0 2 0 0 0 5 5 2 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 5 0 0 2 0 0 0 0 0 0 g 0 0 0 0 0 2 5 0 0 0 0 0 4 0 0 0 0 0 t 0 0 0 0 0 1 0 5 0 0 0 1 0 0 0 0 0 0

GBF3_MA1351.3_JASPAR_shift10 (GBF3:MA1351.3:JASPAR) 0.718 0.442 4.101 0.870 0.865 364 378 230 340 330 328.400
; 1_m2_assembly_2 versus GBF3_MA1351.3_JASPAR (GBF3:MA1351.3:JASPAR); m=52/61; ncol2=8; w=0; offset=5; strand=D; shift=10; score= 328.4; ----------ACGTGGCA ; cor=0.718; Ncor=0.442; logoDP=4.101; NsEucl=0.870; NSW=0.865; rcor=364; rNcor=378; rlogoDP=230; rNsEucl=340; rNSW=330; rank_mean=328.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 7456 260 341 136 133 385 828 7429 c 0 0 0 0 0 0 0 0 0 0 509 8349 139 113 60 212 8130 400 g 0 0 0 0 0 0 0 0 0 0 636 340 8749 27 9137 7410 275 831 t 0 0 0 0 0 0 0 0 0 0 860 512 232 9185 131 1454 228 801

PK18474.1_M0149_1.02_CISBP_shift9 (PK18474.1:M0149_1.02:CISBP) 0.744 0.401 2.274 0.866 0.875 280 454 294 363 277 333.600
; 1_m2_assembly_2 versus PK18474.1_M0149_1.02_CISBP (PK18474.1:M0149_1.02:CISBP); m=53/61; ncol2=7; w=0; offset=4; strand=D; shift=9; score= 333.6; ---------caCGTGc-- ; cor=0.744; Ncor=0.401; logoDP=2.274; NsEucl=0.866; NSW=0.875; rcor=280; rNcor=454; rlogoDP=294; rNsEucl=363; rNSW=277; rank_mean=333.600; match_rank= a 0 0 0 0 0 0 0 0 0 24 62 7 19 2 17 14 0 0 c 0 0 0 0 0 0 0 0 0 54 8 73 0 13 1 45 0 0 g 0 0 0 0 0 0 0 0 0 13 12 0 77 0 76 21 0 0 t 0 0 0 0 0 0 0 0 0 9 18 20 4 85 6 20 0 0

WRKY45_WRKY45_ArabidopsisPBM_rc_shift4 (WRKY45:WRKY45:ArabidopsisPBM_rc) 0.709 0.456 2.906 0.875 0.860 408 350 281 294 353 337.200
; 1_m2_assembly_2 versus WRKY45_WRKY45_ArabidopsisPBM_rc (WRKY45:WRKY45:ArabidopsisPBM_rc); m=54/61; ncol2=10; w=-1; offset=-1; strand=R; shift=4; score= 337.2; ----trGTCAACGh---- ; cor=0.709; Ncor=0.456; logoDP=2.906; NsEucl=0.875; NSW=0.860; rcor=408; rNcor=350; rlogoDP=281; rNsEucl=294; rNSW=353; rank_mean=337.200; match_rank= a 0 0 0 0 11 45 0 0 1 98 97 9 3 26 0 0 0 0 c 0 0 0 0 13 1 0 0 99 1 0 89 3 32 0 0 0 0 g 0 0 0 0 12 53 99 1 0 1 2 0 88 12 0 0 0 0 t 0 0 0 0 64 1 1 99 0 0 1 2 6 30 0 0 0 0

UNE10_M0158_1.02_CISBP_shift8 (UNE10:M0158_1.02:CISBP) 0.714 0.439 6.375 0.858 0.839 384 384 132 401 420 344.200
; 1_m2_assembly_2 versus UNE10_M0158_1.02_CISBP (UNE10:M0158_1.02:CISBP); m=55/61; ncol2=8; w=0; offset=3; strand=D; shift=8; score= 344.2; --------cCACGTGm-- ; cor=0.714; Ncor=0.439; logoDP=6.375; NsEucl=0.858; NSW=0.839; rcor=384; rNcor=384; rlogoDP=132; rNsEucl=401; rNSW=420; rank_mean=344.200; match_rank= a 0 0 0 0 0 0 0 0 21 0 100 0 0 0 0 27 0 0 c 0 0 0 0 0 0 0 0 50 100 0 100 0 0 0 53 0 0 g 0 0 0 0 0 0 0 0 7 0 0 0 100 0 100 7 0 0 t 0 0 0 0 0 0 0 0 22 0 0 0 0 100 0 13 0 0

UNE10_MA1074.1_JASPAR_shift8 (UNE10:MA1074.1:JASPAR) 0.713 0.439 6.375 0.858 0.838 388 385 133 402 421 345.800
; 1_m2_assembly_2 versus UNE10_MA1074.1_JASPAR (UNE10:MA1074.1:JASPAR); m=56/61; ncol2=8; w=0; offset=3; strand=D; shift=8; score= 345.8; --------cCACGTGm-- ; cor=0.713; Ncor=0.439; logoDP=6.375; NsEucl=0.858; NSW=0.838; rcor=388; rNcor=385; rlogoDP=133; rNsEucl=402; rNSW=421; rank_mean=345.800; match_rank= a 0 0 0 0 0 0 0 0 214 0 999 0 0 0 0 267 0 0 c 0 0 0 0 0 0 0 0 499 999 0 999 0 0 0 533 0 0 g 0 0 0 0 0 0 0 0 72 0 0 0 999 0 999 67 0 0 t 0 0 0 0 0 0 0 0 214 0 0 0 0 999 0 134 0 0

TGA2_MA1068.1_JASPAR_shift10 (TGA2:MA1068.1:JASPAR) 0.709 0.437 5.424 0.863 0.849 406 391 173 374 388 346.400
; 1_m2_assembly_2 versus TGA2_MA1068.1_JASPAR (TGA2:MA1068.1:JASPAR); m=57/61; ncol2=8; w=0; offset=5; strand=D; shift=10; score= 346.4; ----------ACGTCAkC ; cor=0.709; Ncor=0.437; logoDP=5.424; NsEucl=0.863; NSW=0.849; rcor=406; rNcor=391; rlogoDP=173; rNsEucl=374; rNSW=388; rank_mean=346.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 961 1 24 6 27 989 2 78 c 0 0 0 0 0 0 0 0 0 0 1 980 2 5 970 2 110 704 g 0 0 0 0 0 0 0 0 0 0 24 3 974 1 2 7 380 161 t 0 0 0 0 0 0 0 0 0 0 13 16 1 988 1 3 508 58

bZIP2_2_EEAD0097_EEADannot_shift7 (bZIP2_2:EEAD0097:EEADannot) 0.702 0.432 5.560 0.862 0.847 439 394 170 382 394 355.800
; 1_m2_assembly_2 versus bZIP2_2_EEAD0097_EEADannot (bZIP2_2:EEAD0097:EEADannot); m=58/61; ncol2=8; w=0; offset=2; strand=D; shift=7; score= 355.8; -------kmCACGTs--- ; cor=0.702; Ncor=0.432; logoDP=5.560; NsEucl=0.862; NSW=0.847; rcor=439; rNcor=394; rlogoDP=170; rNsEucl=382; rNSW=394; rank_mean=355.800; match_rank= a 0 0 0 0 0 0 0 54 128 0 338 0 0 0 67 0 0 0 c 0 0 0 0 0 0 0 0 210 338 0 338 0 0 95 0 0 0 g 0 0 0 0 0 0 0 110 0 0 0 0 338 0 176 0 0 0 t 0 0 0 0 0 0 0 174 0 0 0 0 0 338 0 0 0 0

gw1.12.257.1_M0662_1.02_CISBP_shift7 (gw1.12.257.1:M0662_1.02:CISBP) 0.758 0.408 0.332 0.858 0.859 234 436 361 404 361 359.200
; 1_m2_assembly_2 versus gw1.12.257.1_M0662_1.02_CISBP (gw1.12.257.1:M0662_1.02:CISBP); m=59/61; ncol2=7; w=0; offset=2; strand=D; shift=7; score= 359.2; -------vwaamgy---- ; cor=0.758; Ncor=0.408; logoDP=0.332; NsEucl=0.858; NSW=0.859; rcor=234; rNcor=436; rlogoDP=361; rNsEucl=404; rNSW=361; rank_mean=359.200; match_rank= a 0 0 0 0 0 0 0 25 26 51 52 35 20 21 0 0 0 0 c 0 0 0 0 0 0 0 26 21 18 19 39 13 25 0 0 0 0 g 0 0 0 0 0 0 0 26 21 15 11 5 54 23 0 0 0 0 t 0 0 0 0 0 0 0 23 32 16 18 21 13 31 0 0 0 0

bZIP910_MA0096.1_JASPAR_rc_shift10 (bZIP910:MA0096.1:JASPAR_rc) 0.753 0.405 1.261 0.855 0.853 252 445 324 417 375 362.600
; 1_m2_assembly_2 versus bZIP910_MA0096.1_JASPAR_rc (bZIP910:MA0096.1:JASPAR_rc); m=60/61; ncol2=7; w=0; offset=5; strand=R; shift=10; score= 362.6; ----------ACGTCAk- ; cor=0.753; Ncor=0.405; logoDP=1.261; NsEucl=0.855; NSW=0.853; rcor=252; rNcor=445; rlogoDP=324; rNsEucl=417; rNSW=375; rank_mean=362.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 35 0 0 c 0 0 0 0 0 0 0 0 0 0 0 35 0 0 35 0 5 0 g 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 15 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 15 0

PIF4_MA0561.1_JASPAR_rc_shift7 (PIF4:MA0561.1:JASPAR_rc) 0.715 0.440 1.352 0.862 0.848 377 382 323 379 393 370.800
; 1_m2_assembly_2 versus PIF4_MA0561.1_JASPAR_rc (PIF4:MA0561.1:JASPAR_rc); m=61/61; ncol2=8; w=0; offset=2; strand=R; shift=7; score= 370.8; -------gsCACGTG--- ; cor=0.715; Ncor=0.440; logoDP=1.352; NsEucl=0.862; NSW=0.848; rcor=377; rNcor=382; rlogoDP=323; rNsEucl=379; rNSW=393; rank_mean=370.800; match_rank= a 0 0 0 0 0 0 0 0 53 0 335 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 65 183 335 0 286 0 0 0 0 0 0 g 0 0 0 0 0 0 0 206 99 0 0 0 335 0 335 0 0 0 t 0 0 0 0 0 0 0 64 0 0 0 49 0 335 0 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
1_m2_assembly_2_shift5 (assembly_2)												; 1_m2_assembly_2 (assembly_2); m=0 (reference); ncol1=13; shift=5; ncol=18; -----wwwCAACGTGAww ; Alignment reference a 0 0 0 0 0 64 66 79 19 178 189 9 13 3 5 158 72 67 c 0 0 0 0 0 39 32 35 142 4 0 162 7 2 7 11 30 29 g 0 0 0 0 0 30 41 24 14 5 1 6 154 3 167 14 33 38 t 0 0 0 0 0 57 51 52 15 3 0 13 16 182 11 7 55 56
PIF3_MA0560.1_JASPAR_shift6 (PIF3:MA0560.1:JASPAR)	0.742	0.571	6.068	0.892	0.883	290	207	150	152	218	203.400	; 1_m2_assembly_2 versus PIF3_MA0560.1_JASPAR (PIF3:MA0560.1:JASPAR); m=1/61; ncol2=10; w=0; offset=1; strand=D; shift=6; score= 203.4; ------dgCCACGTGr-- ; cor=0.742; Ncor=0.571; logoDP=6.068; NsEucl=0.892; NSW=0.883; rcor=290; rNcor=207; rlogoDP=150; rNsEucl=152; rNSW=218; rank_mean=203.400; match_rank= a 0 0 0 0 0 0 210 58 19 0 527 0 0 0 0 259 0 0 c 0 0 0 0 0 0 26 131 399 527 0 409 0 0 0 33 0 0 g 0 0 0 0 0 0 148 222 94 0 0 0 527 0 527 137 0 0 t 0 0 0 0 0 0 143 116 15 0 0 118 0 527 0 98 0 0
DOF4.7_M0652_1.02_CISBP_shift5 (DOF4.7:M0652_1.02:CISBP)	0.746	0.516	1.418	0.902	0.914	276	270	320	85	80	206.200	; 1_m2_assembly_2 versus DOF4.7_M0652_1.02_CISBP (DOF4.7:M0652_1.02:CISBP); m=2/61; ncol2=9; w=0; offset=0; strand=D; shift=5; score= 206.2; -----hrawAAmGt---- ; cor=0.746; Ncor=0.516; logoDP=1.418; NsEucl=0.902; NSW=0.914; rcor=276; rNcor=270; rlogoDP=320; rNsEucl=85; rNSW=80; rank_mean=206.200; match_rank= a 0 0 0 0 0 26 25 37 37 79 74 46 14 19 0 0 0 0 c 0 0 0 0 0 25 23 17 12 6 10 39 4 23 0 0 0 0 g 0 0 0 0 0 24 29 22 13 3 4 6 71 18 0 0 0 0 t 0 0 0 0 0 25 23 24 38 12 12 9 11 40 0 0 0 0
BIM1_M0163_1.02_CISBP_shift8 (BIM1:M0163_1.02:CISBP)	0.721	0.554	3.425	0.898	0.896	354	219	264	112	147	219.200	; 1_m2_assembly_2 versus BIM1_M0163_1.02_CISBP (BIM1:M0163_1.02:CISBP); m=3/61; ncol2=10; w=0; offset=3; strand=D; shift=8; score= 219.2; --------bcaCGTGmyv ; cor=0.721; Ncor=0.554; logoDP=3.425; NsEucl=0.898; NSW=0.896; rcor=354; rNcor=219; rlogoDP=264; rNsEucl=112; rNSW=147; rank_mean=219.200; match_rank= a 0 0 0 0 0 0 0 0 22 13 58 6 14 0 0 37 15 26 c 0 0 0 0 0 0 0 0 25 65 10 77 6 2 0 30 34 25 g 0 0 0 0 0 0 0 0 28 10 18 2 80 0 99 15 24 26 t 0 0 0 0 0 0 0 0 25 12 14 15 0 98 1 18 27 23
BHLH99_ZmJAM2_Mo17_1_EEAD0237_EEADannot_shift0 (BHLH99_ZmJAM2_Mo17_1:EEAD0237:EEADannot)	0.748	0.415	5.199	0.901	0.902	268	423	180	93	133	219.400	; 1_m2_assembly_2 versus BHLH99_ZmJAM2_Mo17_1_EEAD0237_EEADannot (BHLH99_ZmJAM2_Mo17_1:EEAD0237:EEADannot); m=4/61; ncol2=15; w=-5; offset=-5; strand=D; shift=0; score= 219.4; mayrwkwaAmAYRTG--- ; cor=0.748; Ncor=0.415; logoDP=5.199; NsEucl=0.901; NSW=0.902; rcor=268; rNcor=423; rlogoDP=180; rNsEucl=93; rNSW=133; rank_mean=219.400; match_rank= a 30 64 9 52 29 14 33 65 69 35 98 0 30 0 0 0 0 0 c 54 8 44 2 5 3 4 5 12 65 0 72 0 0 0 0 0 0 g 3 9 7 38 1 31 9 6 8 0 0 0 70 0 95 0 0 0 t 13 19 40 8 65 52 54 24 11 0 2 28 0 100 5 0 0 0
BHLH91_MYC2B_B73_1_m1_EEAD0234_EEADannot_shift0 (BHLH91_MYC2B_B73_1_m1:EEAD0234:EEADannot)	0.746	0.415	5.015	0.901	0.903	272	424	185	89	127	219.400	; 1_m2_assembly_2 versus BHLH91_MYC2B_B73_1_m1_EEAD0234_EEADannot (BHLH91_MYC2B_B73_1_m1:EEAD0234:EEADannot); m=5/61; ncol2=15; w=-5; offset=-5; strand=D; shift=0; score= 219.4; mayrwkwaaCAYGTG--- ; cor=0.746; Ncor=0.415; logoDP=5.015; NsEucl=0.901; NSW=0.903; rcor=272; rNcor=424; rlogoDP=185; rNsEucl=89; rNSW=127; rank_mean=219.400; match_rank= a 25 53 18 47 30 14 30 57 57 23 98 0 20 2 0 0 0 0 c 47 12 43 2 6 6 8 12 16 77 0 74 0 1 0 0 0 0 g 12 17 4 34 1 27 14 7 17 0 0 0 80 0 95 0 0 0 t 16 18 35 17 63 53 48 24 10 0 2 26 0 97 5 0 0 0
AT1G29160_M0646_1.02_CISBP_shift6 (AT1G29160:M0646_1.02:CISBP)	0.763	0.470	4.392	0.888	0.899	220	333	210	197	137	219.400	; 1_m2_assembly_2 versus AT1G29160_M0646_1.02_CISBP (AT1G29160:M0646_1.02:CISBP); m=6/61; ncol2=8; w=0; offset=1; strand=D; shift=6; score= 219.4; ------rwWAAmGT---- ; cor=0.763; Ncor=0.470; logoDP=4.392; NsEucl=0.888; NSW=0.899; rcor=220; rNcor=333; rlogoDP=210; rNsEucl=197; rNSW=137; rank_mean=219.400; match_rank= a 0 0 0 0 0 0 25 61 27 100 91 41 5 6 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 54 0 12 0 0 0 0 g 0 0 0 0 0 0 58 0 0 0 9 0 95 0 0 0 0 0 t 0 0 0 0 0 0 17 39 73 0 0 5 0 82 0 0 0 0
ZCW32_M0153_1.02_CISBP_shift7 (ZCW32:M0153_1.02:CISBP)	0.749	0.518	3.204	0.892	0.895	265	267	271	147	149	219.800	; 1_m2_assembly_2 versus ZCW32_M0153_1.02_CISBP (ZCW32:M0153_1.02:CISBP); m=7/61; ncol2=9; w=0; offset=2; strand=D; shift=7; score= 219.8; -------sscACGTGs-- ; cor=0.749; Ncor=0.518; logoDP=3.204; NsEucl=0.892; NSW=0.895; rcor=265; rNcor=267; rlogoDP=271; rNsEucl=147; rNSW=149; rank_mean=219.800; match_rank= a 0 0 0 0 0 0 0 23 22 20 69 2 16 2 1 19 0 0 c 0 0 0 0 0 0 0 27 30 52 10 76 0 4 4 34 0 0 g 0 0 0 0 0 0 0 29 26 13 14 3 83 0 93 26 0 0 t 0 0 0 0 0 0 0 21 22 15 7 19 1 94 2 21 0 0
BIM1_MA0964.1_JASPAR_shift8 (BIM1:MA0964.1:JASPAR)	0.719	0.553	3.369	0.898	0.895	360	224	267	113	148	222.400	; 1_m2_assembly_2 versus BIM1_MA0964.1_JASPAR (BIM1:MA0964.1:JASPAR); m=8/61; ncol2=10; w=0; offset=3; strand=D; shift=8; score= 222.4; --------bcaCGTGmyv ; cor=0.719; Ncor=0.553; logoDP=3.369; NsEucl=0.898; NSW=0.895; rcor=360; rNcor=224; rlogoDP=267; rNsEucl=113; rNSW=148; rank_mean=222.400; match_rank= a 0 0 0 0 0 0 0 0 219 126 582 59 140 1 3 375 147 257 c 0 0 0 0 0 0 0 0 250 655 101 766 62 23 2 301 344 262 g 0 0 0 0 0 0 0 0 281 101 184 23 795 0 990 148 242 257 t 0 0 0 0 0 0 0 0 250 118 132 152 3 976 6 176 268 225
BHLH91_MYC2B_Mo17_1_EEAD0235_EEADannot_shift0 (BHLH91_MYC2B_Mo17_1:EEAD0235:EEADannot)	0.744	0.413	5.182	0.901	0.902	282	426	182	91	131	222.400	; 1_m2_assembly_2 versus BHLH91_MYC2B_Mo17_1_EEAD0235_EEADannot (BHLH91_MYC2B_Mo17_1:EEAD0235:EEADannot); m=9/61; ncol2=15; w=-5; offset=-5; strand=D; shift=0; score= 222.4; cayrwkwaaCAYGTG--- ; cor=0.744; Ncor=0.413; logoDP=5.182; NsEucl=0.901; NSW=0.902; rcor=282; rNcor=426; rlogoDP=182; rNsEucl=91; rNSW=131; rank_mean=222.400; match_rank= a 22 52 17 42 27 17 26 50 47 16 98 0 18 0 0 0 0 0 c 50 14 45 4 8 7 11 12 21 84 0 74 0 1 0 0 0 0 g 13 18 5 37 4 29 17 14 17 0 0 0 82 0 97 0 0 0 t 15 16 33 17 61 47 46 24 15 0 2 26 0 99 3 0 0 0
LOC_Os02g49560_M0327_1.02_CISBP_shift6 (LOC_Os02g49560:M0327_1.02:CISBP)	0.701	0.593	5.710	0.897	0.883	447	172	167	119	219	224.800	; 1_m2_assembly_2 versus LOC_Os02g49560_M0327_1.02_CISBP (LOC_Os02g49560:M0327_1.02:CISBP); m=10/61; ncol2=11; w=0; offset=1; strand=D; shift=6; score= 224.8; ------tkcCACGTGwy- ; cor=0.701; Ncor=0.593; logoDP=5.710; NsEucl=0.897; NSW=0.883; rcor=447; rNcor=172; rlogoDP=167; rNsEucl=119; rNSW=219; rank_mean=224.800; match_rank= a 0 0 0 0 0 0 22 18 20 0 100 0 0 0 3 27 21 0 c 0 0 0 0 0 0 23 18 64 93 0 100 0 0 22 7 29 0 g 0 0 0 0 0 0 22 39 4 7 0 0 100 0 73 19 21 0 t 0 0 0 0 0 0 33 25 12 0 0 0 0 100 2 47 29 0
WRKY15_MA1076.3_JASPAR_shift5 (WRKY15:MA1076.3:JASPAR)	0.782	0.481	4.319	0.882	0.889	171	309	219	248	184	226.200	; 1_m2_assembly_2 versus WRKY15_MA1076.3_JASPAR (WRKY15:MA1076.3:JASPAR); m=11/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 226.2; -----rGTCAACG----- ; cor=0.782; Ncor=0.481; logoDP=4.319; NsEucl=0.882; NSW=0.889; rcor=171; rNcor=309; rlogoDP=219; rNsEucl=248; rNSW=184; rank_mean=226.200; match_rank= a 0 0 0 0 0 583 15 2 9 1221 1218 65 100 0 0 0 0 0 c 0 0 0 0 0 58 7 8 1222 8 3 1088 88 0 0 0 0 0 g 0 0 0 0 0 515 1210 3 2 4 11 8 893 0 0 0 0 0 t 0 0 0 0 0 84 8 1227 7 7 8 79 159 0 0 0 0 0
WRKY30_MA1083.3_JASPAR_shift4 (WRKY30:MA1083.3:JASPAR)	0.791	0.452	4.618	0.880	0.886	156	355	200	259	203	234.600	; 1_m2_assembly_2 versus WRKY30_MA1083.3_JASPAR (WRKY30:MA1083.3:JASPAR); m=12/61; ncol2=9; w=-1; offset=-1; strand=D; shift=4; score= 234.6; ----arGTCAACG----- ; cor=0.791; Ncor=0.452; logoDP=4.618; NsEucl=0.880; NSW=0.886; rcor=156; rNcor=355; rlogoDP=200; rNsEucl=259; rNSW=203; rank_mean=234.600; match_rank= a 0 0 0 0 1385 1530 26 7 16 2524 2521 56 125 0 0 0 0 0 c 0 0 0 0 269 65 11 7 2526 9 11 2387 176 0 0 0 0 0 g 0 0 0 0 366 885 2498 3 6 5 8 19 1992 0 0 0 0 0 t 0 0 0 0 534 74 19 2537 6 16 14 92 261 0 0 0 0 0
GBF1_MA2389.1_JASPAR_shift10 (GBF1:MA2389.1:JASPAR)	0.788	0.425	3.740	0.883	0.905	161	407	254	237	119	235.600	; 1_m2_assembly_2 versus GBF1_MA2389.1_JASPAR (GBF1:MA2389.1:JASPAR); m=13/61; ncol2=7; w=0; offset=5; strand=D; shift=10; score= 235.6; ----------ACGTGkm- ; cor=0.788; Ncor=0.425; logoDP=3.740; NsEucl=0.883; NSW=0.905; rcor=161; rNcor=407; rlogoDP=254; rNsEucl=237; rNSW=119; rank_mean=235.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 863 16 57 20 45 0 279 0 c 0 0 0 0 0 0 0 0 0 0 35 783 135 26 2 51 535 0 g 0 0 0 0 0 0 0 0 0 0 54 111 756 4 954 610 102 0 t 0 0 0 0 0 0 0 0 0 0 47 89 49 948 0 338 81 0
BEE2_M0161_1.02_CISBP_rc_shift7 (BEE2:M0161_1.02:CISBP_rc)	0.710	0.546	3.424	0.896	0.892	403	233	265	124	168	238.600	; 1_m2_assembly_2 versus BEE2_M0161_1.02_CISBP_rc (BEE2:M0161_1.02:CISBP_rc); m=14/61; ncol2=10; w=0; offset=2; strand=R; shift=7; score= 238.6; -------hgCACGTGcw- ; cor=0.710; Ncor=0.546; logoDP=3.424; NsEucl=0.896; NSW=0.892; rcor=403; rNcor=233; rlogoDP=265; rNsEucl=124; rNSW=168; rank_mean=238.600; match_rank= a 0 0 0 0 0 0 0 26 21 14 89 2 16 8 10 22 26 0 c 0 0 0 0 0 0 0 25 23 72 0 82 0 3 4 34 24 0 g 0 0 0 0 0 0 0 24 34 4 3 0 82 0 72 23 24 0 t 0 0 0 0 0 0 0 25 22 10 8 16 2 89 14 21 26 0
MYC3_M0165_1.02_CISBP_rc_shift5 (MYC3:M0165_1.02:CISBP_rc)	0.717	0.552	0.164	0.903	0.905	370	228	400	83	115	239.200	; 1_m2_assembly_2 versus MYC3_M0165_1.02_CISBP_rc (MYC3:M0165_1.02:CISBP_rc); m=15/61; ncol2=10; w=0; offset=0; strand=R; shift=5; score= 239.2; -----wwvsCACgtg--- ; cor=0.717; Ncor=0.552; logoDP=0.164; NsEucl=0.903; NSW=0.905; rcor=370; rNcor=228; rlogoDP=400; rNsEucl=83; rNSW=115; rank_mean=239.200; match_rank= a 0 0 0 0 0 27 30 26 23 18 87 8 22 23 12 0 0 0 c 0 0 0 0 0 20 24 26 25 73 0 74 8 12 6 0 0 0 g 0 0 0 0 0 23 21 25 35 0 12 0 66 7 63 0 0 0 t 0 0 0 0 0 30 25 23 17 9 1 18 4 58 19 0 0 0
WRKY31_MA1307.3_JASPAR_shift5 (WRKY31:MA1307.3:JASPAR)	0.778	0.478	4.430	0.878	0.881	186	315	208	271	227	241.400	; 1_m2_assembly_2 versus WRKY31_MA1307.3_JASPAR (WRKY31:MA1307.3:JASPAR); m=16/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 241.4; -----rGTCAACG----- ; cor=0.778; Ncor=0.478; logoDP=4.430; NsEucl=0.878; NSW=0.881; rcor=186; rNcor=315; rlogoDP=208; rNsEucl=271; rNSW=227; rank_mean=241.400; match_rank= a 0 0 0 0 0 134 2 0 2 297 290 16 29 0 0 0 0 0 c 0 0 0 0 0 4 0 0 296 1 0 264 11 0 0 0 0 0 g 0 0 0 0 0 153 296 0 1 1 3 4 240 0 0 0 0 0 t 0 0 0 0 0 8 1 299 0 0 6 15 19 0 0 0 0 0
BEE2_MA0956.1_JASPAR_shift7 (BEE2:MA0956.1:JASPAR)	0.708	0.545	3.437	0.896	0.891	415	236	263	127	173	242.800	; 1_m2_assembly_2 versus BEE2_MA0956.1_JASPAR (BEE2:MA0956.1:JASPAR); m=17/61; ncol2=10; w=0; offset=2; strand=D; shift=7; score= 242.8; -------hgCACGTGcd- ; cor=0.708; Ncor=0.545; logoDP=3.437; NsEucl=0.896; NSW=0.891; rcor=415; rNcor=236; rlogoDP=263; rNsEucl=127; rNSW=173; rank_mean=242.800; match_rank= a 0 0 0 0 0 0 0 256 211 136 893 23 157 74 104 218 255 0 c 0 0 0 0 0 0 0 253 229 722 0 820 0 33 38 342 236 0 g 0 0 0 0 0 0 0 236 342 38 33 0 820 0 722 229 253 0 t 0 0 0 0 0 0 0 255 218 104 74 157 23 893 136 211 256 0
AtbZIP63_M0272_1.02_CISBP_rc_shift7 (AtbZIP63:M0272_1.02:CISBP_rc)	0.707	0.556	1.545	0.899	0.888	419	217	313	105	190	248.800	; 1_m2_assembly_2 versus AtbZIP63_M0272_1.02_CISBP_rc (AtbZIP63:M0272_1.02:CISBP_rc); m=18/61; ncol2=12; w=0; offset=2; strand=R; shift=7; score= 248.8; -------gcCACGTsagc ; cor=0.707; Ncor=0.556; logoDP=1.545; NsEucl=0.899; NSW=0.888; rcor=419; rNcor=217; rlogoDP=313; rNsEucl=105; rNSW=190; rank_mean=248.800; match_rank= a 0 0 0 0 0 0 0 23 20 5 94 0 0 0 0 66 19 20 c 0 0 0 0 0 0 0 23 60 78 2 100 0 0 64 2 19 40 g 0 0 0 0 0 0 0 31 6 12 2 0 100 0 36 15 43 20 t 0 0 0 0 0 0 0 23 14 5 2 0 0 100 0 17 19 20
1500010105_M0364_1.02_CISBP_shift5 (1500010105:M0364_1.02:CISBP)	0.707	0.543	4.919	0.890	0.879	420	237	192	165	240	250.800	; 1_m2_assembly_2 versus 1500010105_M0364_1.02_CISBP (1500010105:M0364_1.02:CISBP); m=19/61; ncol2=10; w=0; offset=0; strand=D; shift=5; score= 250.8; -----wyGCCACGTG--- ; cor=0.707; Ncor=0.543; logoDP=4.919; NsEucl=0.890; NSW=0.879; rcor=420; rNcor=237; rlogoDP=192; rNsEucl=165; rNSW=240; rank_mean=250.800; match_rank= a 0 0 0 0 0 25 8 12 21 6 100 3 4 0 6 0 0 0 c 0 0 0 0 0 22 46 2 79 92 0 91 10 6 9 0 0 0 g 0 0 0 0 0 24 6 78 0 0 0 6 84 0 79 0 0 0 t 0 0 0 0 0 29 40 8 0 2 0 0 2 94 6 0 0 0
WRKY47_MA1312.2_JASPAR_rc_shift4 (WRKY47:MA1312.2:JASPAR_rc)	0.786	0.449	1.080	0.884	0.892	165	362	329	234	167	251.400	; 1_m2_assembly_2 versus WRKY47_MA1312.2_JASPAR_rc (WRKY47:MA1312.2:JASPAR_rc); m=20/61; ncol2=9; w=-1; offset=-1; strand=R; shift=4; score= 251.4; ----wrGTCAACG----- ; cor=0.786; Ncor=0.449; logoDP=1.080; NsEucl=0.884; NSW=0.892; rcor=165; rNcor=362; rlogoDP=329; rNsEucl=234; rNSW=167; rank_mean=251.400; match_rank= a 0 0 0 0 38 53 0 1 0 83 87 21 0 0 0 0 0 0 c 0 0 0 0 3 1 0 13 88 0 1 65 2 0 0 0 0 0 g 0 0 0 0 13 33 88 0 0 0 0 0 80 0 0 0 0 0 t 0 0 0 0 34 1 0 74 0 5 0 2 6 0 0 0 0 0
BZIP63_MA1745.1_JASPAR_rc_shift7 (BZIP63:MA1745.1:JASPAR_rc)	0.705	0.554	1.542	0.899	0.887	424	220	314	109	195	252.400	; 1_m2_assembly_2 versus BZIP63_MA1745.1_JASPAR_rc (BZIP63:MA1745.1:JASPAR_rc); m=21/61; ncol2=12; w=0; offset=2; strand=R; shift=7; score= 252.4; -------gcCACGTsagc ; cor=0.705; Ncor=0.554; logoDP=1.542; NsEucl=0.899; NSW=0.887; rcor=424; rNcor=220; rlogoDP=314; rNsEucl=109; rNSW=195; rank_mean=252.400; match_rank= a 0 0 0 0 0 0 0 229 201 47 937 0 0 0 0 665 188 203 c 0 0 0 0 0 0 0 229 597.6 783 21 1000 0.04 0.04 644 21 188 390 g 0 0 0 0 0 0 0 313 62 123.19 21 0.04 1000 0.04 356 148.14 437 203 t 0 0 0 0 0 0 0 229 139 47 21 0.04 0.04 1000 0.04 166 188 203
WRKY45_MA1087.1_JASPAR_rc_shift5 (WRKY45:MA1087.1:JASPAR_rc)	0.783	0.482	2.812	0.878	0.881	169	308	284	273	229	252.600	; 1_m2_assembly_2 versus WRKY45_MA1087.1_JASPAR_rc (WRKY45:MA1087.1:JASPAR_rc); m=22/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 252.6; -----rGTCAACG----- ; cor=0.783; Ncor=0.482; logoDP=2.812; NsEucl=0.878; NSW=0.881; rcor=169; rNcor=308; rlogoDP=284; rNsEucl=273; rNSW=229; rank_mean=252.600; match_rank= a 0 0 0 0 0 450 5 4 7 982 974 89 40 0 0 0 0 0 c 0 0 0 0 0 11 3 2 985 11 2 892 25 0 0 0 0 0 g 0 0 0 0 0 531 986 5 3 3 18 4 875 0 0 0 0 0 t 0 0 0 0 0 8 6 988 4 4 6 15 60 0 0 0 0 0
ADOF2_M0649_1.02_CISBP_shift6 (ADOF2:M0649_1.02:CISBP)	0.734	0.452	1.754	0.890	0.902	320	357	303	167	129	255.200	; 1_m2_assembly_2 versus ADOF2_M0649_1.02_CISBP (ADOF2:M0649_1.02:CISBP); m=23/61; ncol2=8; w=0; offset=1; strand=D; shift=6; score= 255.2; ------srwAAmGy---- ; cor=0.734; Ncor=0.452; logoDP=1.754; NsEucl=0.890; NSW=0.902; rcor=320; rNcor=357; rlogoDP=303; rNsEucl=167; rNSW=129; rank_mean=255.200; match_rank= a 0 0 0 0 0 0 24 31 35 81 80 50 11 20 0 0 0 0 c 0 0 0 0 0 0 26 20 14 7 9 40 3 25 0 0 0 0 g 0 0 0 0 0 0 27 25 17 4 2 2 78 21 0 0 0 0 t 0 0 0 0 0 0 23 24 34 8 9 8 8 34 0 0 0 0
WRKY25_MA1081.3_JASPAR_shift5 (WRKY25:MA1081.3:JASPAR)	0.764	0.470	4.247	0.877	0.880	216	332	224	276	234	256.400	; 1_m2_assembly_2 versus WRKY25_MA1081.3_JASPAR (WRKY25:MA1081.3:JASPAR); m=24/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 256.4; -----rGTCAACG----- ; cor=0.764; Ncor=0.470; logoDP=4.247; NsEucl=0.877; NSW=0.880; rcor=216; rNcor=332; rlogoDP=224; rNsEucl=276; rNSW=234; rank_mean=256.400; match_rank= a 0 0 0 0 0 444 9 3 4 1215 1201 130 149 0 0 0 0 0 c 0 0 0 0 0 24 7 7 1217 4 5 1002 53 0 0 0 0 0 g 0 0 0 0 0 731 1202 0 4 4 13 18 927 0 0 0 0 0 t 0 0 0 0 0 29 10 1218 3 5 9 78 99 0 0 0 0 0
GT-3a_MA1207.2_JASPAR_rc_shift1 (GT-3a:MA1207.2:JASPAR_rc)	0.744	0.438	0.593	0.897	0.893	281	389	343	122	160	259.000	; 1_m2_assembly_2 versus GT-3a_MA1207.2_JASPAR_rc (GT-3a:MA1207.2:JASPAR_rc); m=25/61; ncol2=14; w=-4; offset=-4; strand=R; shift=1; score= 259; -ahwWtwwaCACGTG--- ; cor=0.744; Ncor=0.438; logoDP=0.593; NsEucl=0.897; NSW=0.893; rcor=281; rNcor=389; rlogoDP=343; rNsEucl=122; rNSW=160; rank_mean=259.000; match_rank= a 0 213 134 196 108 87 133 126 201 47 371 0 43 0 0 0 0 0 c 0 36 104 4 0 14 40 57 76 324 0 371 0 0 0 0 0 0 g 0 42 3 64 4 66 15 82 40 0 0 0 328 0 360 0 0 0 t 0 80 130 107 259 204 183 106 54 0 0 0 0 371 11 0 0 0
AT1G18960_UN0826.1_JASPAR_shift5 (AT1G18960:UN0826.1:JASPAR)	0.798	0.430	4.092	0.871	0.884	143	398	232	328	209	262.000	; 1_m2_assembly_2 versus AT1G18960_UN0826.1_JASPAR (AT1G18960:UN0826.1:JASPAR); m=26/61; ncol2=7; w=0; offset=0; strand=D; shift=5; score= 262; -----CAmCAAC------ ; cor=0.798; Ncor=0.430; logoDP=4.092; NsEucl=0.871; NSW=0.884; rcor=143; rNcor=398; rlogoDP=232; rNsEucl=328; rNSW=209; rank_mean=262.000; match_rank= a 0 0 0 0 0 0 959 584 0 959 929 0 0 0 0 0 0 0 c 0 0 0 0 0 1000 40 356 976 0 70 994 0 0 0 0 0 0 g 0 0 0 0 0 0 0 58 23 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 40 0 5 0 0 0 0 0 0
WRKY23_MA1080.1_JASPAR_shift5 (WRKY23:MA1080.1:JASPAR)	0.765	0.471	4.594	0.875	0.875	215	331	201	299	272	263.600	; 1_m2_assembly_2 versus WRKY23_MA1080.1_JASPAR (WRKY23:MA1080.1:JASPAR); m=27/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 263.6; -----RGTCAACG----- ; cor=0.765; Ncor=0.471; logoDP=4.594; NsEucl=0.875; NSW=0.875; rcor=215; rNcor=331; rlogoDP=201; rNsEucl=299; rNSW=272; rank_mean=263.600; match_rank= a 0 0 0 0 0 698 1 1 1 998 998 167 143 0 0 0 0 0 c 0 0 0 0 0 1 1 1 998 1 1 831 143 0 0 0 0 0 g 0 0 0 0 0 300 998 1 1 1 1 1 712 0 0 0 0 0 t 0 0 0 0 0 1 1 998 1 1 1 1 1 0 0 0 0 0
WRKY23_M1689_1.02_CISBP_shift5 (WRKY23:M1689_1.02:CISBP)	0.765	0.471	4.687	0.875	0.874	214	330	197	302	281	264.800	; 1_m2_assembly_2 versus WRKY23_M1689_1.02_CISBP (WRKY23:M1689_1.02:CISBP); m=28/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 264.8; -----RGTCAACG----- ; cor=0.765; Ncor=0.471; logoDP=4.687; NsEucl=0.875; NSW=0.874; rcor=214; rNcor=330; rlogoDP=197; rNsEucl=302; rNSW=281; rank_mean=264.800; match_rank= a 0 0 0 0 0 70 0 0 0 100 100 17 14 0 0 0 0 0 c 0 0 0 0 0 0 0 0 100 0 0 83 14 0 0 0 0 0 g 0 0 0 0 0 30 100 0 0 0 0 0 72 0 0 0 0 0 t 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0
WRKY6_MA1300.2_JASPAR_rc_shift5 (WRKY6:MA1300.2:JASPAR_rc)	0.773	0.476	3.013	0.875	0.875	196	319	276	297	269	271.400	; 1_m2_assembly_2 versus WRKY6_MA1300.2_JASPAR_rc (WRKY6:MA1300.2:JASPAR_rc); m=29/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 271.4; -----RGTCAACG----- ; cor=0.773; Ncor=0.476; logoDP=3.013; NsEucl=0.875; NSW=0.875; rcor=196; rNcor=319; rlogoDP=276; rNsEucl=297; rNSW=269; rank_mean=271.400; match_rank= a 0 0 0 0 0 200 0 0 0 285 285 22 28 0 0 0 0 0 c 0 0 0 0 0 0 0 0 285 0 0 262 21 0 0 0 0 0 g 0 0 0 0 0 85 285 0 0 0 0 0 195 0 0 0 0 0 t 0 0 0 0 0 0 0 285 0 0 0 1 41 0 0 0 0 0
WRKY42_MA1310.2_JASPAR_rc_shift5 (WRKY42:MA1310.2:JASPAR_rc)	0.769	0.473	3.010	0.875	0.875	202	324	277	296	265	272.800	; 1_m2_assembly_2 versus WRKY42_MA1310.2_JASPAR_rc (WRKY42:MA1310.2:JASPAR_rc); m=30/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 272.8; -----rGTCAACg----- ; cor=0.769; Ncor=0.473; logoDP=3.010; NsEucl=0.875; NSW=0.875; rcor=202; rNcor=324; rlogoDP=277; rNsEucl=296; rNSW=265; rank_mean=272.800; match_rank= a 0 0 0 0 0 206 0 0 2 309 309 7 46 0 0 0 0 0 c 0 0 0 0 0 7 0 0 307 0 0 301 28 0 0 0 0 0 g 0 0 0 0 0 90 309 0 0 0 0 0 184 0 0 0 0 0 t 0 0 0 0 0 6 0 309 0 0 0 1 51 0 0 0 0 0
POC1_M0151_1.02_CISBP_shift9 (POC1:M0151_1.02:CISBP)	0.772	0.416	4.034	0.872	0.885	199	419	234	320	204	275.200	; 1_m2_assembly_2 versus POC1_M0151_1.02_CISBP (POC1:M0151_1.02:CISBP); m=31/61; ncol2=7; w=0; offset=4; strand=D; shift=9; score= 275.2; ---------cAYGTGs-- ; cor=0.772; Ncor=0.416; logoDP=4.034; NsEucl=0.872; NSW=0.885; rcor=199; rNcor=419; rlogoDP=234; rNsEucl=320; rNSW=204; rank_mean=275.200; match_rank= a 0 0 0 0 0 0 0 0 0 18 73 0 0 0 1 22 0 0 c 0 0 0 0 0 0 0 0 0 55 0 71 0 1 1 30 0 0 g 0 0 0 0 0 0 0 0 0 14 17 0 88 0 98 35 0 0 t 0 0 0 0 0 0 0 0 0 13 10 29 12 99 0 13 0 0
AT3G42860_UN0354.2_JASPAR_shift4 (AT3G42860:UN0354.2:JASPAR)	0.768	0.439	4.458	0.874	0.874	205	386	205	304	283	276.600	; 1_m2_assembly_2 versus AT3G42860_UN0354.2_JASPAR (AT3G42860:UN0354.2:JASPAR); m=32/61; ncol2=9; w=-1; offset=-1; strand=D; shift=4; score= 276.6; ----aAGTCAACg----- ; cor=0.768; Ncor=0.439; logoDP=4.458; NsEucl=0.874; NSW=0.874; rcor=205; rNcor=386; rlogoDP=205; rNsEucl=304; rNSW=283; rank_mean=276.600; match_rank= a 0 0 0 0 804 1072 9 0 10 1277 1279 66 122 0 0 0 0 0 c 0 0 0 0 100 26 6 2 1271 5 1 1136 114 0 0 0 0 0 g 0 0 0 0 170 166 1268 2 1 2 3 6 871 0 0 0 0 0 t 0 0 0 0 213 23 4 1283 5 3 4 79 180 0 0 0 0 0
WRKY65_MA1302.2_JASPAR_shift3 (WRKY65:MA1302.2:JASPAR)	0.773	0.413	4.699	0.875	0.875	194	429	196	300	276	279.000	; 1_m2_assembly_2 versus WRKY65_MA1302.2_JASPAR (WRKY65:MA1302.2:JASPAR); m=33/61; ncol2=10; w=-2; offset=-2; strand=D; shift=3; score= 279; ---aAAGTCAACG----- ; cor=0.773; Ncor=0.413; logoDP=4.699; NsEucl=0.875; NSW=0.875; rcor=194; rNcor=429; rlogoDP=196; rNsEucl=300; rNSW=276; rank_mean=279.000; match_rank= a 0 0 0 380 418 458 0 0 0 600 599 36 50 0 0 0 0 0 c 0 0 0 43 25 6 0 1 600 0 0 542 38 0 0 0 0 0 g 0 0 0 84 34 127 600 0 0 0 0 0 419 0 0 0 0 0 t 0 0 0 93 123 9 0 599 0 0 1 22 93 0 0 0 0 0
AT3G45610_M0650_1.02_CISBP_shift6 (AT3G45610:M0650_1.02:CISBP)	0.769	0.473	0.345	0.877	0.879	203	325	359	278	238	280.600	; 1_m2_assembly_2 versus AT3G45610_M0650_1.02_CISBP (AT3G45610:M0650_1.02:CISBP); m=34/61; ncol2=8; w=0; offset=1; strand=D; shift=6; score= 280.6; ------swwaacgw---- ; cor=0.769; Ncor=0.473; logoDP=0.345; NsEucl=0.877; NSW=0.879; rcor=203; rNcor=325; rlogoDP=359; rNsEucl=278; rNSW=238; rank_mean=280.600; match_rank= a 0 0 0 0 0 0 24 28 26 50 50 24 24 27 0 0 0 0 c 0 0 0 0 0 0 26 24 20 14 17 50 7 22 0 0 0 0 g 0 0 0 0 0 0 26 23 20 17 17 4 54 22 0 0 0 0 t 0 0 0 0 0 0 24 25 34 19 16 22 15 29 0 0 0 0
WRKY38_MA1084.1_JASPAR_rc_shift5 (WRKY38:MA1084.1:JASPAR_rc)	0.746	0.459	2.401	0.879	0.882	275	345	292	269	223	280.800	; 1_m2_assembly_2 versus WRKY38_MA1084.1_JASPAR_rc (WRKY38:MA1084.1:JASPAR_rc); m=35/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 280.8; -----rGTCAACg----- ; cor=0.746; Ncor=0.459; logoDP=2.401; NsEucl=0.879; NSW=0.882; rcor=275; rNcor=345; rlogoDP=292; rNsEucl=269; rNSW=223; rank_mean=280.800; match_rank= a 0 0 0 0 0 289 20 18 14 930 923 55 104 0 0 0 0 0 c 0 0 0 0 0 17 13 10 961 39 21 849 73 0 0 0 0 0 g 0 0 0 0 0 679 951 17 16 23 30 28 672 0 0 0 0 0 t 0 0 0 0 0 15 16 955 9 8 26 69 152 0 0 0 0 0
At3g59060_MA0562.1_JASPAR_rc_shift8 (At3g59060:MA0562.1:JASPAR_rc)	0.756	0.465	5.937	0.870	0.865	241	339	155	343	333	282.200	; 1_m2_assembly_2 versus At3g59060_MA0562.1_JASPAR_rc (At3g59060:MA0562.1:JASPAR_rc); m=36/61; ncol2=8; w=0; offset=3; strand=R; shift=8; score= 282.2; --------sCAYGTGR-- ; cor=0.756; Ncor=0.465; logoDP=5.937; NsEucl=0.870; NSW=0.865; rcor=241; rNcor=339; rlogoDP=155; rNsEucl=343; rNSW=333; rank_mean=282.200; match_rank= a 0 0 0 0 0 0 0 0 30 0 286 0 0 0 0 208 0 0 c 0 0 0 0 0 0 0 0 161 286 0 195 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 95 0 0 0 286 0 286 78 0 0 t 0 0 0 0 0 0 0 0 0 0 0 91 0 286 0 0 0 0
bHLH18_MA1361.1_JASPAR_rc_shift7 (bHLH18:MA1361.1:JASPAR_rc)	0.715	0.414	0.593	0.899	0.888	375	425	344	108	192	288.800	; 1_m2_assembly_2 versus bHLH18_MA1361.1_JASPAR_rc (bHLH18:MA1361.1:JASPAR_rc); m=37/61; ncol2=17; w=0; offset=2; strand=R; shift=7; score= 288.8; -------rmCACGTGdww ; cor=0.715; Ncor=0.414; logoDP=0.593; NsEucl=0.899; NSW=0.888; rcor=375; rNcor=425; rlogoDP=344; rNsEucl=108; rNSW=192; rank_mean=288.800; match_rank= a 0 0 0 0 0 0 0 68 59 4 191 0 2 4 0 64 88 97 c 0 0 0 0 0 0 0 34 79 197 0 192 0 4 0 15 31 29 g 0 0 0 0 0 0 0 60 34 0 3 0 199 0 190 61 27 15 t 0 0 0 0 0 0 0 39 29 0 7 9 0 193 11 61 55 60
WRKY46_MA1296.2_JASPAR_rc_shift3 (WRKY46:MA1296.2:JASPAR_rc)	0.779	0.415	0.268	0.878	0.881	177	420	375	272	228	294.400	; 1_m2_assembly_2 versus WRKY46_MA1296.2_JASPAR_rc (WRKY46:MA1296.2:JASPAR_rc); m=38/61; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score= 294.4; ---AAAGTCAAMG----- ; cor=0.779; Ncor=0.415; logoDP=0.268; NsEucl=0.878; NSW=0.881; rcor=177; rNcor=420; rlogoDP=375; rNsEucl=272; rNSW=228; rank_mean=294.400; match_rank= a 0 0 0 15 18 19 0 0 0 22 22 6 0 0 0 0 0 0 c 0 0 0 0 1 0 0 4 22 0 0 16 1 0 0 0 0 0 g 0 0 0 4 3 3 22 0 0 0 0 0 19 0 0 0 0 0 t 0 0 0 3 0 0 0 18 0 0 0 0 2 0 0 0 0 0
WRKY12_MA1075.1_JASPAR_rc_shift5 (WRKY12:MA1075.1:JASPAR_rc)	0.738	0.454	2.528	0.876	0.878	305	353	290	283	243	294.800	; 1_m2_assembly_2 versus WRKY12_MA1075.1_JASPAR_rc (WRKY12:MA1075.1:JASPAR_rc); m=39/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 294.8; -----GGTCAACG----- ; cor=0.738; Ncor=0.454; logoDP=2.528; NsEucl=0.876; NSW=0.878; rcor=305; rNcor=353; rlogoDP=290; rNsEucl=283; rNSW=243; rank_mean=294.800; match_rank= a 0 0 0 0 0 151 16 14 33 946 913 78 46 0 0 0 0 0 c 0 0 0 0 0 101 5 10 954 29 5 819 76 0 0 0 0 0 g 0 0 0 0 0 722 949 6 6 15 62 33 707 0 0 0 0 0 t 0 0 0 0 0 25 29 971 8 10 20 70 172 0 0 0 0 0
BHLH122_MA1739.2_JASPAR_shift8 (BHLH122:MA1739.2:JASPAR)	0.776	0.418	6.382	0.859	0.861	189	416	131	395	347	295.600	; 1_m2_assembly_2 versus BHLH122_MA1739.2_JASPAR (BHLH122:MA1739.2:JASPAR); m=40/61; ncol2=7; w=0; offset=3; strand=D; shift=8; score= 295.6; --------CmACTTG--- ; cor=0.776; Ncor=0.418; logoDP=6.382; NsEucl=0.859; NSW=0.861; rcor=189; rNcor=416; rlogoDP=131; rNsEucl=395; rNSW=347; rank_mean=295.600; match_rank= a 0 0 0 0 0 0 0 0 12 551 1000 0 0 2 2 0 0 0 c 0 0 0 0 0 0 0 0 988 436 0 995 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 5 2 0 998 0 0 0 t 0 0 0 0 0 0 0 0 0 13 0 0 998 998 0 0 0 0
WRKY14_MA1314.2_JASPAR_shift3 (WRKY14:MA1314.2:JASPAR)	0.765	0.408	4.726	0.872	0.868	212	437	195	326	312	296.400	; 1_m2_assembly_2 versus WRKY14_MA1314.2_JASPAR (WRKY14:MA1314.2:JASPAR); m=41/61; ncol2=10; w=-2; offset=-2; strand=D; shift=3; score= 296.4; ---AAAGTCAACg----- ; cor=0.765; Ncor=0.408; logoDP=4.726; NsEucl=0.872; NSW=0.868; rcor=212; rNcor=437; rlogoDP=195; rNsEucl=326; rNSW=312; rank_mean=296.400; match_rank= a 0 0 0 426 454 509 0 0 0 598 598 36 53 0 0 0 0 0 c 0 0 0 38 22 1 0 0 598 0 0 549 54 0 0 0 0 0 g 0 0 0 51 24 84 598 0 0 0 0 0 397 0 0 0 0 0 t 0 0 0 83 98 4 0 598 0 0 0 13 94 0 0 0 0 0
WRKY55_MA1305.2_JASPAR_rc_shift4 (WRKY55:MA1305.2:JASPAR_rc)	0.771	0.440	1.716	0.874	0.873	200	380	307	312	293	298.400	; 1_m2_assembly_2 versus WRKY55_MA1305.2_JASPAR_rc (WRKY55:MA1305.2:JASPAR_rc); m=42/61; ncol2=9; w=-1; offset=-1; strand=R; shift=4; score= 298.4; ----aAGTCAACG----- ; cor=0.771; Ncor=0.440; logoDP=1.716; NsEucl=0.874; NSW=0.873; rcor=200; rNcor=380; rlogoDP=307; rNsEucl=312; rNSW=293; rank_mean=298.400; match_rank= a 0 0 0 0 389 470 0 0 0 599 599 23 54 0 0 0 0 0 c 0 0 0 0 48 1 0 0 599 0 0 543 59 0 0 0 0 0 g 0 0 0 0 72 128 599 0 0 0 0 2 415 0 0 0 0 0 t 0 0 0 0 90 0 0 599 0 0 0 31 71 0 0 0 0 0
bHLH74.ampDAP_M0179_AthalianaCistrome_shift9 (bHLH74.ampDAP:M0179:AthalianaCistrome)	0.744	0.458	6.441	0.865	0.854	283	348	130	368	370	299.800	; 1_m2_assembly_2 versus bHLH74.ampDAP_M0179_AthalianaCistrome (bHLH74.ampDAP:M0179:AthalianaCistrome); m=43/61; ncol2=8; w=0; offset=4; strand=D; shift=9; score= 299.8; ---------CACGTGAy- ; cor=0.744; Ncor=0.458; logoDP=6.441; NsEucl=0.865; NSW=0.854; rcor=283; rNcor=348; rlogoDP=130; rNsEucl=368; rNSW=370; rank_mean=299.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 87 0 7 0 0 65 0 0 c 0 0 0 0 0 0 0 0 0 87 0 87 0 0 0 20 54 0 g 0 0 0 0 0 0 0 0 0 0 0 0 80 0 87 2 3 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 30 0
WRKY20_MA1295.2_JASPAR_rc_shift5 (WRKY20:MA1295.2:JASPAR_rc)	0.745	0.458	2.973	0.874	0.873	279	347	280	313	294	302.600	; 1_m2_assembly_2 versus WRKY20_MA1295.2_JASPAR_rc (WRKY20:MA1295.2:JASPAR_rc); m=44/61; ncol2=8; w=0; offset=0; strand=R; shift=5; score= 302.6; -----rGTCAAMG----- ; cor=0.745; Ncor=0.458; logoDP=2.973; NsEucl=0.874; NSW=0.873; rcor=279; rNcor=347; rlogoDP=280; rNsEucl=313; rNSW=294; rank_mean=302.600; match_rank= a 0 0 0 0 0 330 0 0 0 599 597 166 74 0 0 0 0 0 c 0 0 0 0 0 0 0 1 600 0 0 420 74 0 0 0 0 0 g 0 0 0 0 0 270 599 0 0 1 1 3 418 0 0 0 0 0 t 0 0 0 0 0 0 1 599 0 0 2 11 34 0 0 0 0 0
PIF3_MA0560.2_JASPAR_shift8 (PIF3:MA0560.2:JASPAR)	0.767	0.413	5.998	0.859	0.860	207	427	152	398	355	307.800	; 1_m2_assembly_2 versus PIF3_MA0560.2_JASPAR (PIF3:MA0560.2:JASPAR); m=45/61; ncol2=7; w=0; offset=3; strand=D; shift=8; score= 307.8; --------CCACGTG--- ; cor=0.767; Ncor=0.413; logoDP=5.998; NsEucl=0.859; NSW=0.860; rcor=207; rNcor=427; rlogoDP=152; rNsEucl=398; rNSW=355; rank_mean=307.800; match_rank= a 0 0 0 0 0 0 0 0 19 0 527 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 399 527 0 409 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 94 0 0 0 527 0 527 0 0 0 t 0 0 0 0 0 0 0 0 15 0 0 118 0 527 0 0 0 0
BZIP63_MA1745.2_JASPAR_rc_shift8 (BZIP63:MA1745.2:JASPAR_rc)	0.733	0.451	5.258	0.869	0.862	325	359	176	347	344	310.200	; 1_m2_assembly_2 versus BZIP63_MA1745.2_JASPAR_rc (BZIP63:MA1745.2:JASPAR_rc); m=46/61; ncol2=8; w=0; offset=3; strand=R; shift=8; score= 310.2; --------cCACGTsa-- ; cor=0.733; Ncor=0.451; logoDP=5.258; NsEucl=0.869; NSW=0.862; rcor=325; rNcor=359; rlogoDP=176; rNsEucl=347; rNSW=344; rank_mean=310.200; match_rank= a 0 0 0 0 0 0 0 0 201 47 937 0 0 0 0 665 0 0 c 0 0 0 0 0 0 0 0 598 783 21 1000 0 0 644 21 0 0 g 0 0 0 0 0 0 0 0 62 123 21 0 1000 0 356 148 0 0 t 0 0 0 0 0 0 0 0 139 47 21 0 0 1000 0 166 0 0
WRKY28_MA1311.3_JASPAR_shift5 (WRKY28:MA1311.3:JASPAR)	0.759	0.409	3.965	0.865	0.873	230	435	242	365	288	312.000	; 1_m2_assembly_2 versus WRKY28_MA1311.3_JASPAR (WRKY28:MA1311.3:JASPAR); m=47/61; ncol2=7; w=0; offset=0; strand=D; shift=5; score= 312; -----rGTCAAC------ ; cor=0.759; Ncor=0.409; logoDP=3.965; NsEucl=0.865; NSW=0.873; rcor=230; rNcor=435; rlogoDP=242; rNsEucl=365; rNSW=288; rank_mean=312.000; match_rank= a 0 0 0 0 0 919 21 6 12 2059 2050 158 0 0 0 0 0 0 c 0 0 0 0 0 67 11 8 2062 17 7 1730 0 0 0 0 0 0 g 0 0 0 0 0 924 2047 1 8 6 18 55 0 0 0 0 0 0 t 0 0 0 0 0 182 13 2077 10 10 17 149 0 0 0 0 0 0
NFYC2_UN0690.2_JASPAR_shift10 (NFYC2:UN0690.2:JASPAR)	0.718	0.442	3.906	0.872	0.868	366	379	244	327	313	325.800	; 1_m2_assembly_2 versus NFYC2_UN0690.2_JASPAR (NFYC2:UN0690.2:JASPAR); m=48/61; ncol2=8; w=0; offset=5; strand=D; shift=10; score= 325.8; ----------ACGTGGCA ; cor=0.718; Ncor=0.442; logoDP=3.906; NsEucl=0.872; NSW=0.868; rcor=366; rNcor=379; rlogoDP=244; rNsEucl=327; rNSW=313; rank_mean=325.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 3455 169 116 79 120 236 343 3557 c 0 0 0 0 0 0 0 0 0 0 259 4264 31 105 53 103 4053 184 g 0 0 0 0 0 0 0 0 0 0 443 87 4428 23 4421 3438 174 508 t 0 0 0 0 0 0 0 0 0 0 523 160 105 4473 86 903 110 431
OsbZIP43_UN0825.1_JASPAR_rc_shift8 (OsbZIP43:UN0825.1:JASPAR_rc)	0.767	0.413	1.947	0.862	0.867	208	428	300	380	320	327.200	; 1_m2_assembly_2 versus OsbZIP43_UN0825.1_JASPAR_rc (OsbZIP43:UN0825.1:JASPAR_rc); m=49/61; ncol2=7; w=0; offset=3; strand=R; shift=8; score= 327.2; --------cCACGTG--- ; cor=0.767; Ncor=0.413; logoDP=1.947; NsEucl=0.862; NSW=0.867; rcor=208; rNcor=428; rlogoDP=300; rNsEucl=380; rNSW=320; rank_mean=327.200; match_rank= a 0 0 0 0 0 0 0 0 200 0 999 0 0 0 25 0 0 0 c 0 0 0 0 0 0 0 0 642 927 0 999 0 0 222 0 0 0 g 0 0 0 0 0 0 0 0 42 72 0 0 999 0 726 0 0 0 t 0 0 0 0 0 0 0 0 114 0 0 0 0 999 25 0 0 0
WRKY70_MA1308.2_JASPAR_rc_shift3 (WRKY70:MA1308.2:JASPAR_rc)	0.779	0.415	0.264	0.871	0.866	178	421	377	336	325	327.400	; 1_m2_assembly_2 versus WRKY70_MA1308.2_JASPAR_rc (WRKY70:MA1308.2:JASPAR_rc); m=50/61; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score= 327.4; ---AAAGTCAACG----- ; cor=0.779; Ncor=0.415; logoDP=0.264; NsEucl=0.871; NSW=0.866; rcor=178; rNcor=421; rlogoDP=377; rNsEucl=336; rNSW=325; rank_mean=327.400; match_rank= a 0 0 0 435 493 536 0 0 0 599 599 1 28 0 0 0 0 0 c 0 0 0 37 11 3 0 0 599 0 0 584 32 0 0 0 0 0 g 0 0 0 45 24 58 599 0 0 0 0 0 464 0 0 0 0 0 t 0 0 0 82 71 2 0 599 0 0 0 14 75 0 0 0 0 0
WRKY18_WRKY18_Athamap_shift5 (WRKY18:WRKY18:Athamap)	0.716	0.440	4.400	0.870	0.865	374	381	209	342	332	327.600	; 1_m2_assembly_2 versus WRKY18_WRKY18_Athamap (WRKY18:WRKY18:Athamap); m=51/61; ncol2=8; w=0; offset=0; strand=D; shift=5; score= 327.6; -----rGTCAAmG----- ; cor=0.716; Ncor=0.440; logoDP=4.400; NsEucl=0.870; NSW=0.865; rcor=374; rNcor=381; rlogoDP=209; rNsEucl=342; rNSW=332; rank_mean=327.600; match_rank= a 0 0 0 0 0 2 0 0 0 5 5 2 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 5 0 0 2 0 0 0 0 0 0 g 0 0 0 0 0 2 5 0 0 0 0 0 4 0 0 0 0 0 t 0 0 0 0 0 1 0 5 0 0 0 1 0 0 0 0 0 0
GBF3_MA1351.3_JASPAR_shift10 (GBF3:MA1351.3:JASPAR)	0.718	0.442	4.101	0.870	0.865	364	378	230	340	330	328.400	; 1_m2_assembly_2 versus GBF3_MA1351.3_JASPAR (GBF3:MA1351.3:JASPAR); m=52/61; ncol2=8; w=0; offset=5; strand=D; shift=10; score= 328.4; ----------ACGTGGCA ; cor=0.718; Ncor=0.442; logoDP=4.101; NsEucl=0.870; NSW=0.865; rcor=364; rNcor=378; rlogoDP=230; rNsEucl=340; rNSW=330; rank_mean=328.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 7456 260 341 136 133 385 828 7429 c 0 0 0 0 0 0 0 0 0 0 509 8349 139 113 60 212 8130 400 g 0 0 0 0 0 0 0 0 0 0 636 340 8749 27 9137 7410 275 831 t 0 0 0 0 0 0 0 0 0 0 860 512 232 9185 131 1454 228 801
PK18474.1_M0149_1.02_CISBP_shift9 (PK18474.1:M0149_1.02:CISBP)	0.744	0.401	2.274	0.866	0.875	280	454	294	363	277	333.600	; 1_m2_assembly_2 versus PK18474.1_M0149_1.02_CISBP (PK18474.1:M0149_1.02:CISBP); m=53/61; ncol2=7; w=0; offset=4; strand=D; shift=9; score= 333.6; ---------caCGTGc-- ; cor=0.744; Ncor=0.401; logoDP=2.274; NsEucl=0.866; NSW=0.875; rcor=280; rNcor=454; rlogoDP=294; rNsEucl=363; rNSW=277; rank_mean=333.600; match_rank= a 0 0 0 0 0 0 0 0 0 24 62 7 19 2 17 14 0 0 c 0 0 0 0 0 0 0 0 0 54 8 73 0 13 1 45 0 0 g 0 0 0 0 0 0 0 0 0 13 12 0 77 0 76 21 0 0 t 0 0 0 0 0 0 0 0 0 9 18 20 4 85 6 20 0 0
WRKY45_WRKY45_ArabidopsisPBM_rc_shift4 (WRKY45:WRKY45:ArabidopsisPBM_rc)	0.709	0.456	2.906	0.875	0.860	408	350	281	294	353	337.200	; 1_m2_assembly_2 versus WRKY45_WRKY45_ArabidopsisPBM_rc (WRKY45:WRKY45:ArabidopsisPBM_rc); m=54/61; ncol2=10; w=-1; offset=-1; strand=R; shift=4; score= 337.2; ----trGTCAACGh---- ; cor=0.709; Ncor=0.456; logoDP=2.906; NsEucl=0.875; NSW=0.860; rcor=408; rNcor=350; rlogoDP=281; rNsEucl=294; rNSW=353; rank_mean=337.200; match_rank= a 0 0 0 0 11 45 0 0 1 98 97 9 3 26 0 0 0 0 c 0 0 0 0 13 1 0 0 99 1 0 89 3 32 0 0 0 0 g 0 0 0 0 12 53 99 1 0 1 2 0 88 12 0 0 0 0 t 0 0 0 0 64 1 1 99 0 0 1 2 6 30 0 0 0 0
UNE10_M0158_1.02_CISBP_shift8 (UNE10:M0158_1.02:CISBP)	0.714	0.439	6.375	0.858	0.839	384	384	132	401	420	344.200	; 1_m2_assembly_2 versus UNE10_M0158_1.02_CISBP (UNE10:M0158_1.02:CISBP); m=55/61; ncol2=8; w=0; offset=3; strand=D; shift=8; score= 344.2; --------cCACGTGm-- ; cor=0.714; Ncor=0.439; logoDP=6.375; NsEucl=0.858; NSW=0.839; rcor=384; rNcor=384; rlogoDP=132; rNsEucl=401; rNSW=420; rank_mean=344.200; match_rank= a 0 0 0 0 0 0 0 0 21 0 100 0 0 0 0 27 0 0 c 0 0 0 0 0 0 0 0 50 100 0 100 0 0 0 53 0 0 g 0 0 0 0 0 0 0 0 7 0 0 0 100 0 100 7 0 0 t 0 0 0 0 0 0 0 0 22 0 0 0 0 100 0 13 0 0
UNE10_MA1074.1_JASPAR_shift8 (UNE10:MA1074.1:JASPAR)	0.713	0.439	6.375	0.858	0.838	388	385	133	402	421	345.800	; 1_m2_assembly_2 versus UNE10_MA1074.1_JASPAR (UNE10:MA1074.1:JASPAR); m=56/61; ncol2=8; w=0; offset=3; strand=D; shift=8; score= 345.8; --------cCACGTGm-- ; cor=0.713; Ncor=0.439; logoDP=6.375; NsEucl=0.858; NSW=0.838; rcor=388; rNcor=385; rlogoDP=133; rNsEucl=402; rNSW=421; rank_mean=345.800; match_rank= a 0 0 0 0 0 0 0 0 214 0 999 0 0 0 0 267 0 0 c 0 0 0 0 0 0 0 0 499 999 0 999 0 0 0 533 0 0 g 0 0 0 0 0 0 0 0 72 0 0 0 999 0 999 67 0 0 t 0 0 0 0 0 0 0 0 214 0 0 0 0 999 0 134 0 0
TGA2_MA1068.1_JASPAR_shift10 (TGA2:MA1068.1:JASPAR)	0.709	0.437	5.424	0.863	0.849	406	391	173	374	388	346.400	; 1_m2_assembly_2 versus TGA2_MA1068.1_JASPAR (TGA2:MA1068.1:JASPAR); m=57/61; ncol2=8; w=0; offset=5; strand=D; shift=10; score= 346.4; ----------ACGTCAkC ; cor=0.709; Ncor=0.437; logoDP=5.424; NsEucl=0.863; NSW=0.849; rcor=406; rNcor=391; rlogoDP=173; rNsEucl=374; rNSW=388; rank_mean=346.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 961 1 24 6 27 989 2 78 c 0 0 0 0 0 0 0 0 0 0 1 980 2 5 970 2 110 704 g 0 0 0 0 0 0 0 0 0 0 24 3 974 1 2 7 380 161 t 0 0 0 0 0 0 0 0 0 0 13 16 1 988 1 3 508 58
bZIP2_2_EEAD0097_EEADannot_shift7 (bZIP2_2:EEAD0097:EEADannot)	0.702	0.432	5.560	0.862	0.847	439	394	170	382	394	355.800	; 1_m2_assembly_2 versus bZIP2_2_EEAD0097_EEADannot (bZIP2_2:EEAD0097:EEADannot); m=58/61; ncol2=8; w=0; offset=2; strand=D; shift=7; score= 355.8; -------kmCACGTs--- ; cor=0.702; Ncor=0.432; logoDP=5.560; NsEucl=0.862; NSW=0.847; rcor=439; rNcor=394; rlogoDP=170; rNsEucl=382; rNSW=394; rank_mean=355.800; match_rank= a 0 0 0 0 0 0 0 54 128 0 338 0 0 0 67 0 0 0 c 0 0 0 0 0 0 0 0 210 338 0 338 0 0 95 0 0 0 g 0 0 0 0 0 0 0 110 0 0 0 0 338 0 176 0 0 0 t 0 0 0 0 0 0 0 174 0 0 0 0 0 338 0 0 0 0
gw1.12.257.1_M0662_1.02_CISBP_shift7 (gw1.12.257.1:M0662_1.02:CISBP)	0.758	0.408	0.332	0.858	0.859	234	436	361	404	361	359.200	; 1_m2_assembly_2 versus gw1.12.257.1_M0662_1.02_CISBP (gw1.12.257.1:M0662_1.02:CISBP); m=59/61; ncol2=7; w=0; offset=2; strand=D; shift=7; score= 359.2; -------vwaamgy---- ; cor=0.758; Ncor=0.408; logoDP=0.332; NsEucl=0.858; NSW=0.859; rcor=234; rNcor=436; rlogoDP=361; rNsEucl=404; rNSW=361; rank_mean=359.200; match_rank= a 0 0 0 0 0 0 0 25 26 51 52 35 20 21 0 0 0 0 c 0 0 0 0 0 0 0 26 21 18 19 39 13 25 0 0 0 0 g 0 0 0 0 0 0 0 26 21 15 11 5 54 23 0 0 0 0 t 0 0 0 0 0 0 0 23 32 16 18 21 13 31 0 0 0 0
bZIP910_MA0096.1_JASPAR_rc_shift10 (bZIP910:MA0096.1:JASPAR_rc)	0.753	0.405	1.261	0.855	0.853	252	445	324	417	375	362.600	; 1_m2_assembly_2 versus bZIP910_MA0096.1_JASPAR_rc (bZIP910:MA0096.1:JASPAR_rc); m=60/61; ncol2=7; w=0; offset=5; strand=R; shift=10; score= 362.6; ----------ACGTCAk- ; cor=0.753; Ncor=0.405; logoDP=1.261; NsEucl=0.855; NSW=0.853; rcor=252; rNcor=445; rlogoDP=324; rNsEucl=417; rNSW=375; rank_mean=362.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 35 0 0 c 0 0 0 0 0 0 0 0 0 0 0 35 0 0 35 0 5 0 g 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 15 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 15 0
PIF4_MA0561.1_JASPAR_rc_shift7 (PIF4:MA0561.1:JASPAR_rc)	0.715	0.440	1.352	0.862	0.848	377	382	323	379	393	370.800	; 1_m2_assembly_2 versus PIF4_MA0561.1_JASPAR_rc (PIF4:MA0561.1:JASPAR_rc); m=61/61; ncol2=8; w=0; offset=2; strand=R; shift=7; score= 370.8; -------gsCACGTG--- ; cor=0.715; Ncor=0.440; logoDP=1.352; NsEucl=0.862; NSW=0.848; rcor=377; rNcor=382; rlogoDP=323; rNsEucl=379; rNSW=393; rank_mean=370.800; match_rank= a 0 0 0 0 0 0 0 0 53 0 335 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 65 183 335 0 286 0 0 0 0 0 0 g 0 0 0 0 0 0 0 206 99 0 0 0 335 0 335 0 0 0 t 0 0 0 0 0 0 0 64 0 0 0 49 0 335 0 0 0 0

One-to-n matrix alignment; reference matrix: 1_m9_assembly_9_shift0 ; 4 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
1_m9_assembly_9_shift0 (assembly_9)
; 1_m9_assembly_9 (assembly_9); m=0 (reference); ncol1=10; shift=0; ncol=10; awAGCGAAww ; Alignment reference a 27 29 69 0 0 0 69 69 25 18 c 11 13 0 0 69 0 0 0 9 14 g 15 7 0 69 0 69 0 0 14 14 t 16 20 0 0 0 0 0 0 21 23

Dof2_MA0020.2_JASPAR_shift0 (Dof2:MA0020.2:JASPAR) 0.811 0.405 4.302 0.851 0.889 116 444 221 424 187 278.400
; 1_m9_assembly_9 versus Dof2_MA0020.2_JASPAR (Dof2:MA0020.2:JASPAR); m=1/3; ncol2=5; w=0; offset=0; strand=D; shift=0; score= 278.4; AAAGc----- ; cor=0.811; Ncor=0.405; logoDP=4.302; NsEucl=0.851; NSW=0.889; rcor=116; rNcor=444; rlogoDP=221; rNsEucl=424; rNSW=187; rank_mean=278.400; match_rank= a 21 21 21 0 3 0 0 0 0 0 c 0 0 0 0 14 0 0 0 0 0 g 0 0 0 21 2 0 0 0 0 0 t 0 0 0 0 2 0 0 0 0 0

AN1_EEAD0066_EEADannot_shift3 (AN1:EEAD0066:EEADannot) 0.722 0.459 7.628 0.846 0.834 350 343 99 429 432 330.600
; 1_m9_assembly_9 versus AN1_EEAD0066_EEADannot (AN1:EEAD0066:EEADannot); m=2/3; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 330.6; ---GCGyATG ; cor=0.722; Ncor=0.459; logoDP=7.628; NsEucl=0.846; NSW=0.834; rcor=350; rNcor=343; rlogoDP=99; rNsEucl=429; rNSW=432; rank_mean=330.600; match_rank= a 0 0 0 0 0 0 23 00100 0 0 c 0 0 0 0 100 0 29 0.000 0 0 g 0 0 0 100 0 100 22 1.000 0 100 t 0 0 0 0 0 0 26 0.000 100 0

Dof3_MA0021.1_JASPAR_shift0 (Dof3:MA0021.1:JASPAR) 0.701 0.421 4.380 0.838 0.842 449 413 215 444 410 386.200
; 1_m9_assembly_9 versus Dof3_MA0021.1_JASPAR (Dof3:MA0021.1:JASPAR); m=3/3; ncol2=6; w=0; offset=0; strand=D; shift=0; score= 386.2; AAAGyv---- ; cor=0.701; Ncor=0.421; logoDP=4.380; NsEucl=0.838; NSW=0.842; rcor=449; rNcor=413; rlogoDP=215; rNsEucl=444; rNSW=410; rank_mean=386.200; match_rank= a 21 21 21 0 0 6 0 0 0 0 c 0 0 0 0 10 6 0 0 0 0 g 0 0 0 21 3 9 0 0 0 0 t 0 0 0 0 8 0 0 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
1_m9_assembly_9_shift0 (assembly_9)												; 1_m9_assembly_9 (assembly_9); m=0 (reference); ncol1=10; shift=0; ncol=10; awAGCGAAww ; Alignment reference a 27 29 69 0 0 0 69 69 25 18 c 11 13 0 0 69 0 0 0 9 14 g 15 7 0 69 0 69 0 0 14 14 t 16 20 0 0 0 0 0 0 21 23
Dof2_MA0020.2_JASPAR_shift0 (Dof2:MA0020.2:JASPAR)	0.811	0.405	4.302	0.851	0.889	116	444	221	424	187	278.400	; 1_m9_assembly_9 versus Dof2_MA0020.2_JASPAR (Dof2:MA0020.2:JASPAR); m=1/3; ncol2=5; w=0; offset=0; strand=D; shift=0; score= 278.4; AAAGc----- ; cor=0.811; Ncor=0.405; logoDP=4.302; NsEucl=0.851; NSW=0.889; rcor=116; rNcor=444; rlogoDP=221; rNsEucl=424; rNSW=187; rank_mean=278.400; match_rank= a 21 21 21 0 3 0 0 0 0 0 c 0 0 0 0 14 0 0 0 0 0 g 0 0 0 21 2 0 0 0 0 0 t 0 0 0 0 2 0 0 0 0 0
AN1_EEAD0066_EEADannot_shift3 (AN1:EEAD0066:EEADannot)	0.722	0.459	7.628	0.846	0.834	350	343	99	429	432	330.600	; 1_m9_assembly_9 versus AN1_EEAD0066_EEADannot (AN1:EEAD0066:EEADannot); m=2/3; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 330.6; ---GCGyATG ; cor=0.722; Ncor=0.459; logoDP=7.628; NsEucl=0.846; NSW=0.834; rcor=350; rNcor=343; rlogoDP=99; rNsEucl=429; rNSW=432; rank_mean=330.600; match_rank= a 0 0 0 0 0 0 23 00100 0 0 c 0 0 0 0 100 0 29 0.000 0 0 g 0 0 0 100 0 100 22 1.000 0 100 t 0 0 0 0 0 0 26 0.000 100 0
Dof3_MA0021.1_JASPAR_shift0 (Dof3:MA0021.1:JASPAR)	0.701	0.421	4.380	0.838	0.842	449	413	215	444	410	386.200	; 1_m9_assembly_9 versus Dof3_MA0021.1_JASPAR (Dof3:MA0021.1:JASPAR); m=3/3; ncol2=6; w=0; offset=0; strand=D; shift=0; score= 386.2; AAAGyv---- ; cor=0.701; Ncor=0.421; logoDP=4.380; NsEucl=0.838; NSW=0.842; rcor=449; rNcor=413; rlogoDP=215; rNsEucl=444; rNSW=410; rank_mean=386.200; match_rank= a 21 21 21 0 0 6 0 0 0 0 c 0 0 0 0 10 6 0 0 0 0 g 0 0 0 21 3 9 0 0 0 0 t 0 0 0 0 8 0 0 0 0 0