; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/05/16/oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/05/16/oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/05/16/oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/05/16/oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/05/16/oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	831	1071	253	578	200	2260	236	2355	300	2379	1928	2329	1000	1222
c	381	346	101	122	109	97	95	86	115	84	144	89	355	338
g	338	355	89	144	84	115	86	95	97	109	122	101	346	381
t	1222	1000	2329	1928	2379	300	2355	236	2260	200	578	253	1071	831
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m1_rc.png
;
a	64	66	79	19	178	189	9	13	3	5	158	72	67
c	39	32	35	142	4	0	162	7	2	7	11	30	29
g	30	41	24	14	5	1	6	154	3	167	14	33	38
t	57	51	52	15	3	0	13	16	182	11	7	55	56
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m2_rc.png
;
a	32	38	79	9	78	89	4	10	2	12	15	15	34	32
c	22	17	4	76	6	1	87	2	2	2	64	6	13	11
g	12	21	5	7	6	3	2	79	2	78	10	68	19	25
t	31	21	9	5	7	4	4	6	91	5	8	8	31	29
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m3_rc.png
;
a	96	68	0	220	220	0	0	220	67	84
c	22	53	220	0	0	220	0	0	43	37
g	29	23	0	0	0	0	0	0	43	31
t	73	76	0	0	0	0	220	0	67	68
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m4_rc.png
;
a	195	183	36	26	544	38	56	27	491	199	197
c	117	104	18	512	10	472	27	8	19	101	104
g	79	112	13	16	8	9	453	8	23	92	91
t	192	184	516	29	21	64	47	540	50	191	191
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m5_rc.png
;
a	381	319	869	869	0	869	869	0	334	332
c	127	150	0	0	0	0	0	0	114	129
g	129	108	0	0	0	0	0	0	131	105
t	232	292	0	0	869	0	0	869	290	303
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m6_rc.png
;
a	97	101	248	248	248	0	248	0	96	96
c	42	63	0	0	0	0	0	248	45	33
g	34	35	0	0	0	248	0	0	28	44
t	75	49	0	0	0	0	0	0	79	75
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m7_rc.png
;
a	1027	772	1044	127	2238	147	2289	149	2246	1777	1947	827	1088
c	325	310	546	64	41	53	41	67	62	102	115	346	327
g	334	291	279	24	46	43	45	56	70	86	114	307	312
t	782	1095	599	2253	143	2225	93	2196	90	503	292	988	741
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m8_rc.png
;
a	27	29	69	0	0	0	69	69	25	18
c	11	13	0	0	69	0	0	0	9	14
g	15	7	0	69	0	69	0	0	14	14
t	16	20	0	0	0	0	0	0	21	23
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m9_rc.png
;
a	50	51	3	11	168	16	13	0	3	10	52	48	52
c	36	30	8	153	3	140	6	1	5	11	24	37	29
g	27	29	7	7	2	7	148	0	4	142	35	31	37
t	63	66	158	5	3	13	9	175	164	13	65	60	58
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m10_rc.png
;
a	43	48	132	0	132	0	0	0	48	33
c	20	31	0	132	0	0	0	0	19	26
g	28	23	0	0	0	0	132	132	25	19
t	41	30	0	0	0	132	0	0	40	54
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m11_rc.png
;
a	465	349	935	109	968	120	990	122	960	379	462
c	160	250	40	797	25	821	6	807	12	229	153
g	131	170	16	33	6	25	11	25	19	123	170
t	271	258	36	88	28	61	20	73	36	296	242
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124457_ceJlAB_pssm_count_matrices_logo_m12_rc.png
;
; Host name	rsat
; Job started	2026-05-16.124506
; Job done	2026-05-16.124511
; Seconds	0.35
;	user	0.35
;	system	0.11
;	cuser	3.39
;	csystem	0.63