; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/05/16/oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/05/16/oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/05/16/oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/05/16/oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/05/16/oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	72	54	0	0	0	156	156	0	59	71	52
c	12	16	0	0	156	0	0	156	20	27	28
g	16	31	156	0	0	0	0	0	22	22	29
t	56	55	0	156	0	0	0	0	55	36	47
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_logo_m1_rc.png
;
a	136	139	335	317	25	11	25	345	339	50	125	150	131
c	73	77	4	10	14	2	307	6	3	269	51	55	79
g	52	60	6	12	288	4	6	1	2	17	67	67	43
t	98	83	14	20	32	342	21	7	15	23	116	87	106
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_logo_m2_rc.png
;
a	86	98	85	238	48	23	10	15	242	245	18	83	104	77
c	42	46	86	3	167	6	5	226	7	6	215	31	46	51
g	38	36	32	5	12	212	1	11	4	4	11	38	30	39
t	94	80	57	14	33	19	244	8	7	5	16	108	80	93
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_logo_m3_rc.png
;
a	126	141	337	15	29	19	28	17	16	121	112
c	56	69	8	321	5	311	5	2	19	43	78
g	49	74	10	12	9	8	292	4	298	85	57
t	135	82	11	18	323	28	41	343	33	117	119
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_logo_m4_rc.png
;
a	8	9	3	3	36	1	3	1	3	33	14	13
c	5	8	1	31	0	1	4	34	0	1	2	6
g	6	5	30	0	0	33	29	0	0	0	5	8
t	17	14	2	2	0	1	0	1	33	2	15	9
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/16//oligo-analysis_2026-05-16.124906_fgMS9b_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-05-16.124913
; Job done	2026-05-16.124915
; Seconds	0.14
;	user	0.14
;	system	0.06
;	cuser	1.37
;	csystem	0.21