position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.120740_2026-05-18.120740_qxsUFj/data/sequences/peak-motifs_ctrl_maxlen2000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 1 -ci 20 -img_format png -title zf420_gene_peaks -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.120740_2026-05-18.120740_qxsUFj/results/composition/peak-motifs_ctrl_profiles-1str-ovlp_1nt_ci20.tab Citation: van Helden, et al. (2000). Nucleic Acids Res 28, 1000-1010. Sequence file $RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.120740_2026-05-18.120740_qxsUFj/data/sequences/peak-motifs_ctrl_maxlen2000_purged_ml40_mis3.fasta Sequence format fasta Sequence type dna Output file $RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.120740_2026-05-18.120740_qxsUFj/results/composition/peak-motifs_ctrl_profiles-1str-ovlp_1nt_ci20.tab Oligo length 1 Occurrences counted on a single strands Conditions of applicability checked. Background model estimation: homogeneous repartition Sequence statistics: Nb of sequences 696 Sum of sequence lengths 1134460 Min sequence length 0 Max sequence length 2000 Average sequence length 1629 Possible positions 1134460 Oligonucleotide statistics: Total occurrences 1099377 Position interval parameters: Position interval 20 Number of windows 100 Total positions 1134460 Degrees of freedom 99 K-mer clustering parameters: Number of clusters 0 Clustering method complete Position intervals: window [min,max] mid seq occ 1 -50 [-999,-980] -989.5 378 7518 2 -49 [-979,-960] -969.5 386 7637 3 -48 [-959,-940] -949.5 398 7825 4 -47 [-939,-920] -929.5 402 8009 5 -46 [-919,-900] -909.5 407 8076 6 -45 [-899,-880] -889.5 414 8190 7 -44 [-879,-860] -869.5 423 8384 8 -43 [-859,-840] -849.5 428 8486 9 -42 [-839,-820] -829.5 439 8727 10 -41 [-819,-800] -809.5 446 8847 11 -40 [-799,-780] -789.5 452 8997 12 -39 [-779,-760] -769.5 457 9090 13 -38 [-759,-740] -749.5 467 9233 14 -37 [-739,-720] -729.5 479 9436 15 -36 [-719,-700] -709.5 490 9686 16 -35 [-699,-680] -689.5 493 9819 17 -34 [-679,-660] -669.5 502 9931 18 -33 [-659,-640] -649.5 512 10125 19 -32 [-639,-620] -629.5 524 10350 20 -31 [-619,-600] -609.5 534 10577 21 -30 [-599,-580] -589.5 541 10764 22 -29 [-579,-560] -569.5 553 10965 23 -28 [-559,-540] -549.5 562 11154 24 -27 [-539,-520] -529.5 573 11366 25 -26 [-519,-500] -509.5 584 11581 26 -25 [-499,-480] -489.5 588 11729 27 -24 [-479,-460] -469.5 599 11918 28 -23 [-459,-440] -449.5 607 12089 29 -22 [-439,-420] -429.5 615 12243 30 -21 [-419,-400] -409.5 620 12353 31 -20 [-399,-380] -389.5 628 12470 32 -19 [-379,-360] -369.5 637 12666 33 -18 [-359,-340] -349.5 652 12933 34 -17 [-339,-320] -329.5 657 13086 35 -16 [-319,-300] -309.5 669 13273 36 -15 [-299,-280] -289.5 676 13484 37 -14 [-279,-260] -269.5 689 13624 38 -13 [-259,-240] -249.5 694 13856 39 -12 [-239,-220] -229.5 694 13880 40 -11 [-219,-200] -209.5 695 13892 41 -10 [-199,-180] -189.5 695 13900 42 -9 [-179,-160] -169.5 695 13900 43 -8 [-159,-140] -149.5 695 13900 44 -7 [-139,-120] -129.5 696 13920 45 -6 [-119,-100] -109.5 696 13920 46 -5 [-99,-80] -89.5 696 13920 47 -4 [-79,-60] -69.5 696 13920 48 -3 [-59,-40] -49.5 696 13920 49 -2 [-39,-20] -29.5 696 13920 50 -1 [-19,0] -9.5 696 13920 51 0 [1,20] 10.5 696 13920 52 1 [21,40] 30.5 696 13920 53 2 [41,60] 50.5 696 13920 54 3 [61,80] 70.5 696 13920 55 4 [81,100] 90.5 696 13920 56 5 [101,120] 110.5 696 13920 57 6 [121,140] 130.5 696 13918 58 7 [141,160] 150.5 695 13900 59 8 [161,180] 170.5 695 13900 60 9 [181,200] 190.5 695 13900 61 10 [201,220] 210.5 695 13891 62 11 [221,240] 230.5 694 13880 63 12 [241,260] 250.5 694 13850 64 13 [261,280] 270.5 689 13612 65 14 [281,300] 290.5 675 13473 66 15 [301,320] 310.5 668 13260 67 16 [321,340] 330.5 657 13082 68 17 [341,360] 350.5 651 12916 69 18 [361,380] 370.5 637 12656 70 19 [381,400] 390.5 628 12464 71 20 [401,420] 410.5 620 12349 72 21 [421,440] 430.5 615 12234 73 22 [441,460] 450.5 607 12076 74 23 [461,480] 470.5 598 11906 75 24 [481,500] 490.5 588 11725 76 25 [501,520] 510.5 583 11567 77 26 [521,540] 530.5 573 11353 78 27 [541,560] 550.5 561 11147 79 28 [561,580] 570.5 553 10952 80 29 [581,600] 590.5 541 10757 81 30 [601,620] 610.5 534 10561 82 31 [621,640] 630.5 523 10340 83 32 [641,660] 650.5 510 10114 84 33 [661,680] 670.5 501 9922 85 34 [681,700] 690.5 492 9817 86 35 [701,720] 710.5 489 9677 87 36 [721,740] 730.5 477 9420 88 37 [741,760] 750.5 467 9225 89 38 [761,780] 770.5 455 9086 90 39 [781,800] 790.5 452 8989 91 40 [801,820] 810.5 445 8839 92 41 [821,840] 830.5 439 8715 93 42 [841,860] 850.5 428 8482 94 43 [861,880] 870.5 423 8377 95 44 [881,900] 890.5 414 8181 96 45 [901,920] 910.5 407 8072 97 46 [921,940] 930.5 401 8004 98 47 [941,960] 950.5 395 7808 99 48 [961,980] 970.5 386 7624 100 49 [981,1000] 990.5 378 7510 Column headers 1 seq pattern sequence 2 id pattern identifier 3 occ pattern occurrences 4 chi2 observed chi-square 5 df degrees of freedom 6 Pval P-value (probability for one word to be a false positive) 7 Eval E-value; expected number of false positives (Eval = Pval * nb_tests) 8 sig Significance (sig = -log10(Eval)) 9 rank rank of the pattern according to sorting criterion 10 -989.5 occurrences in window 1 [-999,-980] 11 -969.5 occurrences in window 2 [-979,-960] 12 -949.5 occurrences in window 3 [-959,-940] 13 -929.5 occurrences in window 4 [-939,-920] 14 -909.5 occurrences in window 5 [-919,-900] 15 -889.5 occurrences in window 6 [-899,-880] 16 -869.5 occurrences in window 7 [-879,-860] 17 -849.5 occurrences in window 8 [-859,-840] 18 -829.5 occurrences in window 9 [-839,-820] 19 -809.5 occurrences in window 10 [-819,-800] 20 -789.5 occurrences in window 11 [-799,-780] 21 -769.5 occurrences in window 12 [-779,-760] 22 -749.5 occurrences in window 13 [-759,-740] 23 -729.5 occurrences in window 14 [-739,-720] 24 -709.5 occurrences in window 15 [-719,-700] 25 -689.5 occurrences in window 16 [-699,-680] 26 -669.5 occurrences in window 17 [-679,-660] 27 -649.5 occurrences in window 18 [-659,-640] 28 -629.5 occurrences in window 19 [-639,-620] 29 -609.5 occurrences in window 20 [-619,-600] 30 -589.5 occurrences in window 21 [-599,-580] 31 -569.5 occurrences in window 22 [-579,-560] 32 -549.5 occurrences in window 23 [-559,-540] 33 -529.5 occurrences in window 24 [-539,-520] 34 -509.5 occurrences in window 25 [-519,-500] 35 -489.5 occurrences in window 26 [-499,-480] 36 -469.5 occurrences in window 27 [-479,-460] 37 -449.5 occurrences in window 28 [-459,-440] 38 -429.5 occurrences in window 29 [-439,-420] 39 -409.5 occurrences in window 30 [-419,-400] 40 -389.5 occurrences in window 31 [-399,-380] 41 -369.5 occurrences in window 32 [-379,-360] 42 -349.5 occurrences in window 33 [-359,-340] 43 -329.5 occurrences in window 34 [-339,-320] 44 -309.5 occurrences in window 35 [-319,-300] 45 -289.5 occurrences in window 36 [-299,-280] 46 -269.5 occurrences in window 37 [-279,-260] 47 -249.5 occurrences in window 38 [-259,-240] 48 -229.5 occurrences in window 39 [-239,-220] 49 -209.5 occurrences in window 40 [-219,-200] 50 -189.5 occurrences in window 41 [-199,-180] 51 -169.5 occurrences in window 42 [-179,-160] 52 -149.5 occurrences in window 43 [-159,-140] 53 -129.5 occurrences in window 44 [-139,-120] 54 -109.5 occurrences in window 45 [-119,-100] 55 -89.5 occurrences in window 46 [-99,-80] 56 -69.5 occurrences in window 47 [-79,-60] 57 -49.5 occurrences in window 48 [-59,-40] 58 -29.5 occurrences in window 49 [-39,-20] 59 -9.5 occurrences in window 50 [-19,0] 60 10.5 occurrences in window 51 [1,20] 61 30.5 occurrences in window 52 [21,40] 62 50.5 occurrences in window 53 [41,60] 63 70.5 occurrences in window 54 [61,80] 64 90.5 occurrences in window 55 [81,100] 65 110.5 occurrences in window 56 [101,120] 66 130.5 occurrences in window 57 [121,140] 67 150.5 occurrences in window 58 [141,160] 68 170.5 occurrences in window 59 [161,180] 69 190.5 occurrences in window 60 [181,200] 70 210.5 occurrences in window 61 [201,220] 71 230.5 occurrences in window 62 [221,240] 72 250.5 occurrences in window 63 [241,260] 73 270.5 occurrences in window 64 [261,280] 74 290.5 occurrences in window 65 [281,300] 75 310.5 occurrences in window 66 [301,320] 76 330.5 occurrences in window 67 [321,340] 77 350.5 occurrences in window 68 [341,360] 78 370.5 occurrences in window 69 [361,380] 79 390.5 occurrences in window 70 [381,400] 80 410.5 occurrences in window 71 [401,420] 81 430.5 occurrences in window 72 [421,440] 82 450.5 occurrences in window 73 [441,460] 83 470.5 occurrences in window 74 [461,480] 84 490.5 occurrences in window 75 [481,500] 85 510.5 occurrences in window 76 [501,520] 86 530.5 occurrences in window 77 [521,540] 87 550.5 occurrences in window 78 [541,560] 88 570.5 occurrences in window 79 [561,580] 89 590.5 occurrences in window 80 [581,600] 90 610.5 occurrences in window 81 [601,620] 91 630.5 occurrences in window 82 [621,640] 92 650.5 occurrences in window 83 [641,660] 93 670.5 occurrences in window 84 [661,680] 94 690.5 occurrences in window 85 [681,700] 95 710.5 occurrences in window 86 [701,720] 96 730.5 occurrences in window 87 [721,740] 97 750.5 occurrences in window 88 [741,760] 98 770.5 occurrences in window 89 [761,780] 99 790.5 occurrences in window 90 [781,800] 100 810.5 occurrences in window 91 [801,820] 101 830.5 occurrences in window 92 [821,840] 102 850.5 occurrences in window 93 [841,860] 103 870.5 occurrences in window 94 [861,880] 104 890.5 occurrences in window 95 [881,900] 105 910.5 occurrences in window 96 [901,920] 106 930.5 occurrences in window 97 [921,940] 107 950.5 occurrences in window 98 [941,960] 108 970.5 occurrences in window 99 [961,980] 109 990.5 occurrences in window 100 [981,1000]
| seq | id | occ | chi2 | df | Pval | Eval | sig | rank | -989.5 | -969.5 | -949.5 | -929.5 | -909.5 | -889.5 | -869.5 | -849.5 | -829.5 | -809.5 | -789.5 | -769.5 | -749.5 | -729.5 | -709.5 | -689.5 | -669.5 | -649.5 | -629.5 | -609.5 | -589.5 | -569.5 | -549.5 | -529.5 | -509.5 | -489.5 | -469.5 | -449.5 | -429.5 | -409.5 | -389.5 | -369.5 | -349.5 | -329.5 | -309.5 | -289.5 | -269.5 | -249.5 | -229.5 | -209.5 | -189.5 | -169.5 | -149.5 | -129.5 | -109.5 | -89.5 | -69.5 | -49.5 | -29.5 | -9.5 | 10.5 | 30.5 | 50.5 | 70.5 | 90.5 | 110.5 | 130.5 | 150.5 | 170.5 | 190.5 | 210.5 | 230.5 | 250.5 | 270.5 | 290.5 | 310.5 | 330.5 | 350.5 | 370.5 | 390.5 | 410.5 | 430.5 | 450.5 | 470.5 | 490.5 | 510.5 | 530.5 | 550.5 | 570.5 | 590.5 | 610.5 | 630.5 | 650.5 | 670.5 | 690.5 | 710.5 | 730.5 | 750.5 | 770.5 | 790.5 | 810.5 | 830.5 | 850.5 | 870.5 | 890.5 | 910.5 | 930.5 | 950.5 | 970.5 | 990.5 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| g | g | 123994 | 161.3 | 99 | 7.7e-05 | 0.00031 | 3.51 | 1 | 857 | 872 | 909 | 923 | 891 | 937 | 872 | 921 | 950 | 977 | 973 | 1011 | 1061 | 1094 | 1040 | 1089 | 1098 | 1096 | 1192 | 1107 | 1197 | 1103 | 1271 | 1197 | 1279 | 1356 | 1282 | 1373 | 1482 | 1384 | 1382 | 1382 | 1419 | 1466 | 1474 | 1491 | 1506 | 1503 | 1588 | 1476 | 1539 | 1569 | 1554 | 1595 | 1516 | 1545 | 1532 | 1539 | 1605 | 1454 | 1515 | 1572 | 1530 | 1476 | 1577 | 1565 | 1473 | 1502 | 1521 | 1479 | 1498 | 1454 | 1537 | 1501 | 1516 | 1455 | 1471 | 1387 | 1368 | 1385 | 1386 | 1312 | 1281 | 1270 | 1287 | 1300 | 1182 | 1161 | 1216 | 1169 | 1122 | 1033 | 1059 | 1089 | 1068 | 1023 | 996 | 966 | 920 | 907 | 916 | 908 | 896 | 811 | 872 | 833 | 855 | 836 | 847 | 762 |
| c | c | 123147 | 115.0 | 99 | 1.3e-01 | 0.52 | 0.29 | 2 | 783 | 842 | 852 | 878 | 881 | 865 | 968 | 900 | 946 | 956 | 1010 | 999 | 1005 | 972 | 1061 | 1090 | 1017 | 1143 | 1090 | 1215 | 1172 | 1247 | 1233 | 1281 | 1241 | 1289 | 1328 | 1302 | 1314 | 1352 | 1387 | 1346 | 1436 | 1434 | 1535 | 1570 | 1508 | 1457 | 1464 | 1570 | 1567 | 1541 | 1486 | 1520 | 1534 | 1491 | 1549 | 1473 | 1553 | 1472 | 1455 | 1600 | 1489 | 1517 | 1496 | 1551 | 1488 | 1523 | 1510 | 1512 | 1494 | 1541 | 1570 | 1497 | 1403 | 1396 | 1360 | 1350 | 1337 | 1290 | 1376 | 1268 | 1350 | 1329 | 1289 | 1271 | 1219 | 1261 | 1153 | 1141 | 1149 | 1087 | 1067 | 1089 | 1000 | 1022 | 993 | 949 | 997 | 985 | 950 | 947 | 927 | 907 | 864 | 836 | 805 | 800 | 806 | 806 |
| a | a | 428142 | 114.7 | 99 | 1.3e-01 | 0.53 | 0.27 | 3 | 2891 | 2925 | 3030 | 3110 | 3026 | 3151 | 3316 | 3240 | 3360 | 3413 | 3461 | 3500 | 3510 | 3598 | 3646 | 3652 | 3865 | 3897 | 3819 | 4038 | 4097 | 4078 | 4079 | 4225 | 4340 | 4443 | 4551 | 4567 | 4633 | 4679 | 4823 | 4922 | 4883 | 4949 | 4955 | 5056 | 5183 | 5300 | 5330 | 5271 | 5244 | 5210 | 5274 | 5224 | 5260 | 5324 | 5378 | 5295 | 5226 | 5291 | 5330 | 5255 | 5271 | 5398 | 5240 | 5250 | 5271 | 5273 | 5203 | 5257 | 5377 | 5224 | 5155 | 5224 | 4966 | 5014 | 4934 | 4913 | 4782 | 4673 | 4526 | 4568 | 4496 | 4349 | 4342 | 4301 | 4280 | 4041 | 3995 | 3980 | 3852 | 3822 | 3784 | 3595 | 3699 | 3628 | 3592 | 3531 | 3393 | 3412 | 3275 | 3212 | 3119 | 3109 | 3057 | 3015 | 3005 | 2911 | 2887 | 2818 |
| t | t | 424094 | 88.0 | 99 | 7.8e-01 | 3.1 | -0.49 | 4 | 2848 | 2852 | 2891 | 2938 | 3128 | 3133 | 3116 | 3256 | 3277 | 3288 | 3368 | 3402 | 3473 | 3534 | 3699 | 3717 | 3655 | 3688 | 3948 | 3920 | 3985 | 4167 | 4240 | 4388 | 4450 | 4374 | 4511 | 4620 | 4548 | 4682 | 4612 | 4723 | 4892 | 4935 | 5017 | 5038 | 5089 | 5269 | 5173 | 5245 | 5211 | 5218 | 5226 | 5204 | 5223 | 5170 | 5077 | 5256 | 5157 | 5286 | 5203 | 5103 | 5256 | 5175 | 5283 | 5207 | 5326 | 5244 | 5233 | 5232 | 5157 | 5256 | 5188 | 4998 | 5136 | 4933 | 4880 | 4801 | 4691 | 4670 | 4634 | 4614 | 4490 | 4497 | 4319 | 4184 | 4124 | 4072 | 4005 | 3938 | 3923 | 3883 | 3737 | 3701 | 3626 | 3598 | 3416 | 3386 | 3383 | 3289 | 3319 | 3256 | 3144 | 3123 | 2987 | 2988 | 2934 | 2908 | 2721 | 2806 |
Host name rsat Job started 2026-05-18.120828 Job done 2026-05-18.120834 Seconds 5.35 user 5.35 system 0.01 cuser 0 ; csystem 0