/var/www/html/rsat/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab 
 compare-matrices  -v 1 -format transfac -file $RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_discovered.tf -distinct -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
 Program version       	1.118
 Quick mode 
 Input files
	file1 	$RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_discovered.tf
	file2 	$RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_discovered.tf
 Output files
	html_index   	$RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_disco_compa_index.html
	alignments_1ton	$RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.tab
	match_table_html	$RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_disco_compa.html
	match_table_txt	$RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
	prefix       	$RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_disco_compa
	alignments_1ton_html	$RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.html
 Matrices
	file1	10 matrices	$RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file1	1	14	3991
		file1	2	17	2685
		file1	3	12	4353
		file1	4	13	3426
		file1	5	17	2666
		file1	6	19	2664
		file1	7	17	2710
		file1	8	14	1855
		file1	9	13	3460
		file1	10	20	1986
	file2	10 matrices	$RSAT/public_html/tmp/www-data/2026/05/18/peak-motifs.2026-05-18.125704_2026-05-18.125704_Tyn09B/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file2		1		14		3991
		file2		2		17		2685
		file2		3		12		4353
		file2		4		13		3426
		file2		5		17		2666
		file2		6		19		2664
		file2		7		17		2710
		file2		8		14		1855
		file2		9		13		3460
		file2		10		20		1986
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	w1           	Width of the first matrix
	8	w2           	Width of the second matrix
	9	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	10	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	11	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	12	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	13	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	14	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	15	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
id1 id2 name1 name2 cor Ncor w1 w2 w W Wr wr1 wr2 strand offset
oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 1.000 1.000 17 17 17 17 1.0000 1.0000 1.0000 D 0
oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m5 1.000 1.000 17 17 17 17 1.0000 1.0000 1.0000 D 0
oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m3 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m4 1.000 1.000 13 13 13 13 1.0000 1.0000 1.0000 D 0
oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m1 1.000 1.000 14 14 14 14 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m3 1.000 1.000 14 14 14 14 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 1.000 1.000 17 17 17 17 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m1 1.000 1.000 19 19 19 19 1.0000 1.0000 1.0000 D 0
oligos_6nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m4 1.000 1.000 13 13 13 13 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m5 1.000 1.000 20 20 20 20 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m4 0.957 0.888 14 13 13 14 0.9286 0.9286 1.0000 D 1
oligos_6nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m3 0.957 0.888 13 14 13 14 0.9286 1.0000 0.9286 D -1
oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m5 0.869 0.869 17 17 17 17 1.0000 1.0000 1.0000 D 0
oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m2 0.869 0.869 17 17 17 17 1.0000 1.0000 1.0000 D 0
oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m1 0.971 0.868 17 19 17 19 0.8947 1.0000 0.8947 D 0
oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m2 0.971 0.868 19 17 17 19 0.8947 0.8947 1.0000 D 0
oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m1 0.864 0.821 20 19 19 20 0.9500 0.9500 1.0000 D 0
oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 0.864 0.821 19 20 19 20 0.9500 1.0000 0.9500 D 0
oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 0.967 0.796 14 17 14 17 0.8235 1.0000 0.8235 R -2
oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m1 0.967 0.796 17 14 14 17 0.8235 0.8235 1.0000 R 1
oligos_6nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m1 0.866 0.775 17 19 17 19 0.8947 1.0000 0.8947 D 0
oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m5 0.866 0.775 19 17 17 19 0.8947 0.8947 1.0000 D 0
oligos_6nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m4 0.838 0.774 12 13 12 13 0.9231 1.0000 0.9231 D -1
oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m3 0.838 0.774 13 12 12 13 0.9231 0.9231 1.0000 D 1
oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m5 0.856 0.728 20 17 17 20 0.8500 0.8500 1.0000 D 0
oligos_6nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m5 0.856 0.728 17 20 17 20 0.8500 1.0000 0.8500 D 0
oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m2 0.825 0.701 20 17 17 20 0.8500 0.8500 1.0000 D 0
oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m5 0.825 0.701 17 20 17 20 0.8500 1.0000 0.8500 D 0
oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m5 0.753 0.640 17 20 17 20 0.8500 1.0000 0.8500 D -1
oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m2 0.753 0.640 20 17 17 20 0.8500 0.8500 1.0000 D 1
oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m3 0.825 0.605 14 12 11 15 0.7333 0.7857 0.9167 R -1
oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m1 0.825 0.605 12 14 11 15 0.7333 0.9167 0.7857 R -3
oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m3 0.828 0.584 17 12 12 17 0.7059 0.7059 1.0000 D 4
oligos_6nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m2 0.828 0.584 12 17 12 17 0.7059 1.0000 0.7059 D -4
oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m4 0.728 0.583 14 13 12 15 0.8000 0.8571 0.9231 D -1
oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m1 0.728 0.583 13 14 12 15 0.8000 0.9231 0.8571 D 1
oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m4 0.737 0.564 17 13 13 17 0.7647 0.7647 1.0000 R 3
oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m2 0.737 0.564 13 17 13 17 0.7647 1.0000 0.7647 R -1
oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m5 0.768 0.537 17 17 14 20 0.7000 0.8235 0.8235 D 3
oligos_6nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m2 0.768 0.537 17 17 14 20 0.7000 0.8235 0.8235 D -3
oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 0.727 0.509 14 20 14 20 0.7000 1.0000 0.7000 R -4
oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m1 0.727 0.509 20 14 14 20 0.7000 0.7000 1.0000 R 2
oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 0.719 0.503 17 17 14 20 0.7000 0.8235 0.8235 D 3
oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 0.719 0.503 17 17 14 20 0.7000 0.8235 0.8235 D -3
oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m1 0.740 0.471 17 19 14 22 0.6364 0.8235 0.7368 D 3
oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 0.740 0.471 19 17 14 22 0.6364 0.7368 0.8235 D -3
oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m1 0.714 0.451 17 14 12 19 0.6316 0.7059 0.8571 R -2
oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m5 0.714 0.451 14 17 12 19 0.6316 0.8571 0.7059 R -5 
 Host name	rsat
 Job started	2026-05-18.125959
 Job done	2026-05-18.130014
 Seconds	1.75
	user	1.75
	system	0.69
	cuser	11.08
;	csystem	1.34