; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	6	9	0	27	0	27	0	27	9	10
c	5	5	0	0	27	0	0	0	3	4
g	2	7	0	0	0	0	0	0	0	9
t	14	6	27	0	0	0	27	0	15	4
//
; Sites	27
>site_0
TTTACATAAA
>site_1
AATACATATG
>site_2
CCTACATATG
>site_3
ACTACATATG
>site_4
TGTACATATC
>site_5
TTTACATAAT
>site_6
TGTACATAAA
>site_7
AGTACATATA
>site_8
CATACATATA
>site_9
TTTACATAAG
>site_10
GATACATACG
>site_11
ACTACATATT
>site_12
TCTACATACT
>site_13
TGTACATAAG
>site_14
TATACATATG
>site_15
TTTACATATT
>site_16
TTTACATAAC
>site_17
TCTACATATA
>site_18
CATACATATA
>site_19
TGTACATAAA
>site_20
TGTACATATA
>site_21
AATACATACA
>site_22
GGTACATAAC
>site_23
CATACATATG
>site_24
TATACATATA
>site_25
CATACATATG
>site_26
ATTACATAAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	13	12	0	2	3	3	2	2	11	12
c	17	12	41	38	1	40	40	40	14	14
g	5	6	0	2	40	0	0	0	8	6
t	10	15	4	3	1	2	3	3	12	13
//
; Sites	45
>site_0
TTCCGCCCAG
>site_1
CACCGCCCTC
>site_2
CTCAGCCCCG
>site_3
CCCCGCCCCT
>site_4
TCCCGCCCCA
>site_5
AACCGCCCAA
>site_6
TATCGCCCTA
>site_7
CGCCGCCCGT
>site_8
CTCCGTCCGC
>site_9
CGTCGCCCGT
>site_10
AACAGCCCTA
>site_11
TTCGGCCCTC
>site_12
ACCCGCACTA
>site_13
CCCCGCCCCA
>site_14
CTCCGCCCCG
>site_15
TACTGCCCAT
>site_16
CCCCTCCCCC
>site_17
CTCCCCCCCT
>site_18
CACCGCCCAA
>site_19
GGTCGCCCAC
>site_20
ATCCGCCACC
>site_21
ACCTGCCCTA
>site_22
CTCCACCCCC
>site_23
ACCCGCCCAA
>site_24
TTCTGCCCTC
>site_25
CACCGCTCTC
>site_26
CACCGCACGT
>site_27
GTCCGCCAGA
>site_28
TCCGGCCCAC
>site_29
ATCCGACCTT
>site_30
ACCCGACCCT
>site_31
ACCCACCCAT
>site_32
GATCGCCCGT
>site_33
GGCCGACCCA
>site_34
ATCCGCCCTT
>site_35
ATCCGCCTTC
>site_36
AGCCGCTCTA
>site_37
CACCGCCTCC
>site_38
TTCCGCCCAT
>site_39
CACCGCCCCG
>site_40
ACCCGCTCCC
>site_41
TACCGTCCGG
>site_42
GTCCGCCTAT
>site_43
CGCCGCCCGC
>site_44
TCCCACCCAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	4	2	14	0	1	1	15	0	10	6
c	6	2	0	15	1	0	0	15	2	7
g	4	5	0	0	2	0	0	0	0	0
t	1	6	1	0	11	14	0	0	3	2
//
; Sites	15
>site_0
AGACCTACAC
>site_1
GCACTTACAC
>site_2
GCACTTACAA
>site_3
GTACTTACAC
>site_4
CTACGTACAC
>site_5
CTACGTACAC
>site_6
CGACTTACAA
>site_7
TATCTTACTA
>site_8
AGACTTACAC
>site_9
ATACTAACTA
>site_10
CTACATACTA
>site_11
CAACTTACCT
>site_12
AGACTTACAA
>site_13
CTACTTACAC
>site_14
GGACTTACCT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	6	13	0	34	0	7	0	31	11	20
c	11	5	36	1	36	0	36	1	15	4
g	9	8	0	0	0	0	0	1	5	2
t	10	10	0	1	0	29	0	3	5	10
//
; Sites	36
>site_0
TGCACTCAAA
>site_1
AGCACTCAAA
>site_2
CTCACTCATA
>site_3
GACACTCGAC
>site_4
CTCACTCCGT
>site_5
TACACTCACA
>site_6
CACACACACT
>site_7
ATCACTCTTA
>site_8
ACCACTCAAT
>site_9
GCCACTCAAG
>site_10
CTCACTCTAT
>site_11
TACACTCACA
>site_12
TACACTCAAT
>site_13
TACACTCAAA
>site_14
TGCACTCAGA
>site_15
ACCACTCATA
>site_16
GACCCTCATA
>site_17
CACACTCACA
>site_18
TGCACTCAGC
>site_19
CCCACTCACA
>site_20
CACACACACT
>site_21
TGCACTCACT
>site_22
TGCACTCACC
>site_23
GCCACTCAAA
>site_24
GTCACTCAAA
>site_25
ATCACACATA
>site_26
TTCACTCAAT
>site_27
CACACACACT
>site_28
GACACTCACA
>site_29
CTCACACACG
>site_30
CTCACACAGA
>site_31
AGCACTCACA
>site_32
GACACACACA
>site_33
GGCACTCAGC
>site_34
CACTCTCACT
>site_35
GTCACTCTCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	9	8	2	2	0	5	1	26	13	10
c	8	7	0	0	0	0	30	2	8	5
g	10	6	32	32	34	0	1	2	2	10
t	7	13	0	0	0	29	2	4	11	9
//
; Sites	34
>site_0
AAGGGTCAAA
>site_1
TCGGGACACT
>site_2
GTGGGTCAAA
>site_3
GTGGGTCACT
>site_4
TCGGGTCTTT
>site_5
TAGGGTAATC
>site_6
CTAGGTCATG
>site_7
GCGGGACATA
>site_8
GTGGGTCATC
>site_9
ATGGGTCTAA
>site_10
CTGGGTCCTA
>site_11
GTGAGTCACT
>site_12
GAGGGTCGGG
>site_13
AGGGGTTACG
>site_14
GTGGGTCTAG
>site_15
CAGAGTCACT
>site_16
CCGGGACAAC
>site_17
CCGGGTCAAA
>site_18
ACGGGTCATA
>site_19
ATGGGACAAG
>site_20
TAGGGTCGCT
>site_21
AGAGGTCAGG
>site_22
CTGGGTCACT
>site_23
AGGGGTTACG
>site_24
AGGGGTCAAT
>site_25
TTGGGTCAAG
>site_26
GGGGGTCATC
>site_27
TCGGGACAAG
>site_28
GGGGGTCAAA
>site_29
GAGGGTCAAG
>site_30
CAGGGTGATA
>site_31
TAGGGTCATC
>site_32
ATGGGTCCTA
>site_33
CTGGGTCTAT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/05/27/peak-motifs.2026-05-27.215012_2026-05-27.215012_WiGkpW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-05-27.215021
; Job done	2026-05-27.215022
; Seconds	0.13
;	user	0.13
;	system	0.05
;	cuser	1.23
;	csystem	0.22
