AC  HMGXB4_UN0310.1_JASPAR_rc_shift3
XX
ID  HMGXB4:UN0310.1:JASPAR_rc
XX
DE  oligos_6-8nt_m3 versus HMGXB4_UN0310.1_JASPAR_rc (HMGXB4:UN0310.1:JASPAR_rc); m=101/158; ncol2=13; w=0; offset=0; strand=R; shift=3; score=   94.4; ---vsCGCCCCCTvsy---
P0           a         c         g         t
1            0         0         0         0
2            0         0         0         0
3            0         0         0         0
4         3522      3994      4432      2071
5         1741      4858      5684      1736
6          679     10306       861      2173
7          266        71     13197       485
8          228     13208       287       296
9          163     12907       661       288
10         898     11663      1032       426
11         227     12331       579       882
12         168     13331       333       187
13         295       395      1056     12273
14        4298      3726      4405      1590
15        1270      5437      5356      1956
16        2179      4299      2895      4646
17           0         0         0         0
18           0         0         0         0
19           0         0         0         0
XX
CC  shift: 3
CC  consensus.strict: ---ggCGCCCCCTgct---
CC  consensus.strict.rc: ---AGCAGGGGGCGCC---
CC  consensus.IUPAC: ---vsCGCCCCCTvsy---
CC  consensus.IUPAC.rc: ---RSBAGGGGGCGSB---
CC  consensus.regexp: ---[acg][cg]CGCCCCCT[acg][cg][ct]---
CC  consensus.regexp.rc: ---[AG][CG][CGT]AGGGGGCG[CG][CGT]---
CC  description: oligos_6-8nt_m3 versus HMGXB4_UN0310.1_JASPAR_rc (HMGXB4:UN0310.1:JASPAR_rc); m=101/158; ncol2=13; w=0; offset=0; strand=R; shift=3; score=   94.4; ---vsCGCCCCCTvsy---
XX
//