One-to-n alignments

Command: compare-matrices  -v 1 -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/05/29/compare-matrices_2026-05-29.141919_T2t2ED/compare-matrices_query_matrices.transfac -file2 $RSAT/public_html/motif_databases/footprintDB/footprintDB.plants.motif.tf -format2 tf -strand DR -lth cor 0.4 -lth Ncor 0.4 -uth match_rank 50 -return cor,Ncor,logoDP,NsEucl,NSW,match_rank,matrix_id,matrix_name,width,strand,offset,consensus,alignments_1ton -o $RSAT/public_html/tmp/www-data/2026/05/29/compare-matrices_2026-05-29.141919_T2t2ED/compare-matrices.tab

One-to-n matrix alignment; reference matrix: oligos_6-8nt_m4_shift7 ; 242 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
oligos_6-8nt_m4_shift7 (oligos_6-8nt_m4)
; oligos_6-8nt_m4; m=0 (reference); ncol1=12; shift=7; ncol=19; -------rwCAGGCCGmmv ; Alignment reference a 0 0 0 0 0 0 0 9 8 1 15 1 1 1 0 0 14 7 6 c 0 0 0 0 0 0 0 2 2 17 1 3 0 19 19 0 6 7 7 g 0 0 0 0 0 0 0 7 5 3 4 15 19 0 0 21 0 5 6 t 0 0 0 0 0 0 0 3 6 0 1 2 1 1 2 0 1 2 2

AT4G00270_M1620_1.02_CISBP_shift9 (AT4G00270:M1620_1.02:CISBP) 0.811 0.541 5.993 0.890 0.904 11 15 9 47 30 22.400 1
; oligos_6-8nt_m4 versus AT4G00270_M1620_1.02_CISBP (AT4G00270:M1620_1.02:CISBP); m=1/241; ncol2=8; w=0; offset=2; strand=D; shift=9; score= 22.4; ---------cCGGCCGc-- ; cor=0.811; Ncor=0.541; logoDP=5.993; NsEucl=0.890; NSW=0.904; rcor=11; rNcor=15; rlogoDP=9; rNsEucl=47; rNSW=30; rank_mean=22.400; match_rank=1 a 0 0 0 0 0 0 0 0 0 24 14 3 0 5 0 0 21 0 0 c 0 0 0 0 0 0 0 0 0 56 81 0 0 95 100 0 61 0 0 g 0 0 0 0 0 0 0 0 0 4 0 97 100 0 0 97 4 0 0 t 0 0 0 0 0 0 0 0 0 16 5 0 0 0 0 3 14 0 0

GEBP_UN0399.1_JASPAR_rc_shift9 (GEBP:UN0399.1:JASPAR_rc) 0.811 0.541 4.955 0.890 0.904 12 16 70 48 31 35.400 2
; oligos_6-8nt_m4 versus GEBP_UN0399.1_JASPAR_rc (GEBP:UN0399.1:JASPAR_rc); m=2/241; ncol2=8; w=0; offset=2; strand=R; shift=9; score= 35.4; ---------cCGGCCGc-- ; cor=0.811; Ncor=0.541; logoDP=4.955; NsEucl=0.890; NSW=0.904; rcor=12; rNcor=16; rlogoDP=70; rNsEucl=48; rNSW=31; rank_mean=35.400; match_rank=2 a 0 0 0 0 0 0 0 0 0 240 135 25 0.25 50 0.25 0.27 214 0 0 c 0 0 0 0 0 0 0 0 0 560 810 0.25 0.25 949 999 0.27 607 0 0 g 0 0 0 0 0 0 0 0 0 40 0.27 974 999 0.25 0.25 972 36.02 0 0 t 0 0 0 0 0 0 0 0 0 160 54 0.25 0.25 0.25 0.25 27 143.01 0 0

ERF13_MA1004.1_JASPAR_shift11 (ERF13:MA1004.1:JASPAR) 0.783 0.522 5.198 0.890 0.903 27 22 57 50 33 37.800 3
; oligos_6-8nt_m4 versus ERF13_MA1004.1_JASPAR (ERF13:MA1004.1:JASPAR); m=3/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 37.8; -----------sGCCGcCr ; cor=0.783; Ncor=0.522; logoDP=5.198; NsEucl=0.890; NSW=0.903; rcor=27; rNcor=22; rlogoDP=57; rNsEucl=50; rNSW=33; rank_mean=37.800; match_rank=3 a 0 0 0 0 0 0 0 0 0 0 0 217 0 16 0 0 97 0 461 c 0 0 0 0 0 0 0 0 0 0 0 478 49 951 983 16 645 999 103 g 0 0 0 0 0 0 0 0 0 0 0 283 951 32 16 983 145 0 282 t 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 113 0 154

ATERF13_M0020_1.02_CISBP_shift11 (ATERF13:M0020_1.02:CISBP) 0.782 0.521 5.135 0.890 0.903 29 23 60 51 34 39.400 4
; oligos_6-8nt_m4 versus ATERF13_M0020_1.02_CISBP (ATERF13:M0020_1.02:CISBP); m=4/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 39.4; -----------sGCCGcCr ; cor=0.782; Ncor=0.521; logoDP=5.135; NsEucl=0.890; NSW=0.903; rcor=29; rNcor=23; rlogoDP=60; rNsEucl=51; rNSW=34; rank_mean=39.400; match_rank=4 a 0 0 0 0 0 0 0 0 0 0 0 22 0 2 0 0 10 0 47 c 0 0 0 0 0 0 0 0 0 0 0 48 5 95 98 2 64 100 10 g 0 0 0 0 0 0 0 0 0 0 0 28 95 3 2 98 15 0 28 t 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 11 0 15

LOC_Os08g36920_M0044_1.02_CISBP_shift9 (LOC_Os08g36920:M0044_1.02:CISBP) 0.744 0.620 4.221 0.907 0.914 51 1 133 6 17 41.600 5
; oligos_6-8nt_m4 versus LOC_Os08g36920_M0044_1.02_CISBP (LOC_Os08g36920:M0044_1.02:CISBP); m=5/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 41.6; ---------bscGsCGyma ; cor=0.744; Ncor=0.620; logoDP=4.221; NsEucl=0.907; NSW=0.914; rcor=51; rNcor=1; rlogoDP=133; rNsEucl=6; rNSW=17; rank_mean=41.600; match_rank=5 a 0 0 0 0 0 0 0 0 0 23 19 23 17 2 0 0 21 30 35 c 0 0 0 0 0 0 0 0 0 25 32 34 0 64 100 0 49 32 19 g 0 0 0 0 0 0 0 0 0 25 25 24 79 31 0 100 0 16 23 t 0 0 0 0 0 0 0 0 0 27 24 19 4 3 0 0 30 22 23

RAP2.6_RAP2.6_2_ArabidopsisPBM_shift10 (RAP2.6:RAP2.6_2:ArabidopsisPBM) 0.759 0.525 4.682 0.897 0.905 44 20 94 22 29 41.800 6
; oligos_6-8nt_m4 versus RAP2.6_RAP2.6_2_ArabidopsisPBM (RAP2.6:RAP2.6_2:ArabidopsisPBM); m=6/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 41.8; ----------mrGCCGCmA ; cor=0.759; Ncor=0.525; logoDP=4.682; NsEucl=0.897; NSW=0.905; rcor=44; rNcor=20; rlogoDP=94; rNsEucl=22; rNSW=29; rank_mean=41.800; match_rank=6 a 0 0 0 0 0 0 0 0 0 0 38 56 5 2 1 4 5 49 68 c 0 0 0 0 0 0 0 0 0 0 36 6 0 95 94 0 77 46 15 g 0 0 0 0 0 0 0 0 0 0 7 29 94 2 4 95 7 1 1 t 0 0 0 0 0 0 0 0 0 0 19 9 1 1 1 1 11 4 16

DREB1F_MA1748.1_JASPAR_shift11 (DREB1F:MA1748.1:JASPAR) 0.802 0.493 4.407 0.898 0.917 16 46 119 21 16 43.600 7
; oligos_6-8nt_m4 versus DREB1F_MA1748.1_JASPAR (DREB1F:MA1748.1:JASPAR); m=7/241; ncol2=9; w=0; offset=4; strand=D; shift=11; score= 43.6; -----------yrCCGACa ; cor=0.802; Ncor=0.493; logoDP=4.407; NsEucl=0.898; NSW=0.917; rcor=16; rNcor=46; rlogoDP=119; rNsEucl=21; rNSW=16; rank_mean=43.600; match_rank=7 a 0 0 0 0 0 0 0 0 0 0 0 188.9 259 3.26 0.2299 3.63 962 20 527 c 0 0 0 0 0 0 0 0 0 0 0 273 68 767 982 1.31 19 970 149 g 0 0 0 0 0 0 0 0 0 0 0 235 638 7.41 14 992.76 4.09 9.19 168 t 0 0 0 0 0 0 0 0 0 0 0 302 35 222.04 3.74 2.29 15 0.12 155.49

HRD_M0019_1.02_CISBP_shift10 (HRD:M0019_1.02:CISBP) 0.784 0.588 3.038 0.910 0.927 25 3 188 1 4 44.200 8
; oligos_6-8nt_m4 versus HRD_M0019_1.02_CISBP (HRD:M0019_1.02:CISBP); m=8/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 44.2; ----------ytrCCGaCa ; cor=0.784; Ncor=0.588; logoDP=3.038; NsEucl=0.910; NSW=0.927; rcor=25; rNcor=3; rlogoDP=188; rNsEucl=1; rNSW=4; rank_mean=44.200; match_rank=8 a 0 0 0 0 0 0 0 0 0 0 19 17 31 0 4 4 54 9 42 c 0 0 0 0 0 0 0 0 0 0 29 23 4 89 88 3 23 71 16 g 0 0 0 0 0 0 0 0 0 0 23 19 57 2 5 90 8 10 22 t 0 0 0 0 0 0 0 0 0 0 29 41 8 9 3 3 15 10 20

DREB1G_MA1032.1_JASPAR_shift10 (DREB1G:MA1032.1:JASPAR) 0.747 0.517 5.669 0.886 0.884 48 26 18 68 66 45.200 9
; oligos_6-8nt_m4 versus DREB1G_MA1032.1_JASPAR (DREB1G:MA1032.1:JASPAR); m=9/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 45.2; ----------atGCCGACA ; cor=0.747; Ncor=0.517; logoDP=5.669; NsEucl=0.886; NSW=0.884; rcor=48; rNcor=26; rlogoDP=18; rNsEucl=68; rNSW=66; rank_mean=45.200; match_rank=9 a 0 0 0 0 0 0 0 0 0 0 314 119 180 0 0 0 884 0 845 c 0 0 0 0 0 0 0 0 0 0 229 226 0 999 999 0 0 999 22 g 0 0 0 0 0 0 0 0 0 0 229 119 820 0 0 999 115 0 22 t 0 0 0 0 0 0 0 0 0 0 229 535 0 0 0 0 0 0 111

AT1G22985_M0007_1.02_CISBP_shift10 (AT1G22985:M0007_1.02:CISBP) 0.772 0.579 3.086 0.908 0.923 32 6 185 4 9 47.200 10
; oligos_6-8nt_m4 versus AT1G22985_M0007_1.02_CISBP (AT1G22985:M0007_1.02:CISBP); m=10/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 47.2; ----------scGCCGcca ; cor=0.772; Ncor=0.579; logoDP=3.086; NsEucl=0.908; NSW=0.923; rcor=32; rNcor=6; rlogoDP=185; rNsEucl=4; rNSW=9; rank_mean=47.200; match_rank=10 a 0 0 0 0 0 0 0 0 0 0 19 20 2 6 10 18 14 22 35 c 0 0 0 0 0 0 0 0 0 0 29 46 0 83 68 0 42 40 21 g 0 0 0 0 0 0 0 0 0 0 32 18 98 9 7 82 21 19 23 t 0 0 0 0 0 0 0 0 0 0 20 16 0 2 15 0 23 19 21

LOC_Os02g45450_M0042_1.02_CISBP_shift10 (LOC_Os02g45450:M0042_1.02:CISBP) 0.746 0.517 5.663 0.886 0.883 50 27 20 72 69 47.600 11
; oligos_6-8nt_m4 versus LOC_Os02g45450_M0042_1.02_CISBP (LOC_Os02g45450:M0042_1.02:CISBP); m=11/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 47.6; ----------atGCCGACA ; cor=0.746; Ncor=0.517; logoDP=5.663; NsEucl=0.886; NSW=0.883; rcor=50; rNcor=27; rlogoDP=20; rNsEucl=72; rNSW=69; rank_mean=47.600; match_rank=11 a 0 0 0 0 0 0 0 0 0 0 31 12 18 0 0 0 88 0 85 c 0 0 0 0 0 0 0 0 0 0 23 23 0 100 100 0 0 100 2 g 0 0 0 0 0 0 0 0 0 0 23 12 82 0 0 100 12 0 2 t 0 0 0 0 0 0 0 0 0 0 23 53 0 0 0 0 0 0 11

ERF069_MA0997.1_JASPAR_shift10 (ERF069:MA0997.1:JASPAR) 0.771 0.578 3.089 0.907 0.923 34 7 184 5 10 48.000 12
; oligos_6-8nt_m4 versus ERF069_MA0997.1_JASPAR (ERF069:MA0997.1:JASPAR); m=12/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 48; ----------scGCCGcca ; cor=0.771; Ncor=0.578; logoDP=3.089; NsEucl=0.907; NSW=0.923; rcor=34; rNcor=7; rlogoDP=184; rNsEucl=5; rNSW=10; rank_mean=48.000; match_rank=12 a 0 0 0 0 0 0 0 0 0 0 193 197 18 61 98 179 138 224 351 c 0 0 0 0 0 0 0 0 0 0 294 471 0 828 680 0 419 404 209 g 0 0 0 0 0 0 0 0 0 0 315 175 982 86 76 820 212 193 231 t 0 0 0 0 0 0 0 0 0 0 197 157 0 24 146 0 230 180 209

DREB1G_MA1032.2_JASPAR_shift11 (DREB1G:MA1032.2:JASPAR) 0.773 0.515 5.667 0.879 0.883 31 28 19 97 67 48.400 13
; oligos_6-8nt_m4 versus DREB1G_MA1032.2_JASPAR (DREB1G:MA1032.2:JASPAR); m=13/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 48.4; -----------tGCCGACA ; cor=0.773; Ncor=0.515; logoDP=5.667; NsEucl=0.879; NSW=0.883; rcor=31; rNcor=28; rlogoDP=19; rNsEucl=97; rNSW=67; rank_mean=48.400; match_rank=13 a 0 0 0 0 0 0 0 0 0 0 0 119 180 0 0 0 884 0 845 c 0 0 0 0 0 0 0 0 0 0 0 226 0 999 999 0 0 999 22 g 0 0 0 0 0 0 0 0 0 0 0 119 820 0 0 999 115 0 22 t 0 0 0 0 0 0 0 0 0 0 0 535 0 0 0 0 0 0 111

DREB1C_MA1670.2_JASPAR_shift12 (DREB1C:MA1670.2:JASPAR) 0.840 0.452 4.887 0.889 0.914 4 108 75 55 19 52.200 14
; oligos_6-8nt_m4 versus DREB1C_MA1670.2_JASPAR (DREB1C:MA1670.2:JASPAR); m=14/241; ncol2=8; w=0; offset=5; strand=D; shift=12; score= 52.2; ------------RCCGACA ; cor=0.840; Ncor=0.452; logoDP=4.887; NsEucl=0.889; NSW=0.914; rcor=4; rNcor=108; rlogoDP=75; rNsEucl=55; rNSW=19; rank_mean=52.200; match_rank=14 a 0 0 0 0 0 0 0 0 0 0 0 0 2243 59 43 43 8318 28 6267 c 0 0 0 0 0 0 0 0 0 0 0 0 45 7517 8357 38 50 8363 594 g 0 0 0 0 0 0 0 0 0 0 0 0 6059 35 15 8333 48 26 647 t 0 0 0 0 0 0 0 0 0 0 0 0 105 841 37 38 36 35 944

ERF11_M0009_1.02_CISBP_shift10 (ERF11:M0009_1.02:CISBP) 0.766 0.530 2.727 0.907 0.922 39 18 196 8 13 54.800 15
; oligos_6-8nt_m4 versus ERF11_M0009_1.02_CISBP (ERF11:M0009_1.02:CISBP); m=15/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 54.8; ----------scGCCGyma ; cor=0.766; Ncor=0.530; logoDP=2.727; NsEucl=0.907; NSW=0.922; rcor=39; rNcor=18; rlogoDP=196; rNsEucl=8; rNSW=13; rank_mean=54.800; match_rank=15 a 0 0 0 0 0 0 0 0 0 0 21 21 11 2 15 13 20 26 42 c 0 0 0 0 0 0 0 0 0 0 31 49 0 83 70 1 38 49 17 g 0 0 0 0 0 0 0 0 0 0 31 13 89 6 5 83 15 8 18 t 0 0 0 0 0 0 0 0 0 0 17 17 0 9 10 3 27 17 23

CRF3_M0041_1.02_CISBP_shift10 (CRF3:M0041_1.02:CISBP) 0.762 0.571 2.494 0.906 0.920 42 10 205 9 14 56.000 16
; oligos_6-8nt_m4 versus CRF3_M0041_1.02_CISBP (CRF3:M0041_1.02:CISBP); m=16/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 56; ----------scGCCgcca ; cor=0.762; Ncor=0.571; logoDP=2.494; NsEucl=0.906; NSW=0.920; rcor=42; rNcor=10; rlogoDP=205; rNsEucl=9; rNSW=14; rank_mean=56.000; match_rank=16 a 0 0 0 0 0 0 0 0 0 0 19 22 6 2 9 17 20 22 34 c 0 0 0 0 0 0 0 0 0 0 31 48 0 88 78 10 42 46 24 g 0 0 0 0 0 0 0 0 0 0 30 16 94 5 6 62 14 13 21 t 0 0 0 0 0 0 0 0 0 0 20 14 0 5 7 11 24 19 21

Rap2.6L_M0036_1.02_CISBP_shift10 (Rap2.6L:M0036_1.02:CISBP) 0.767 0.531 2.358 0.907 0.922 38 17 207 7 12 56.200 17
; oligos_6-8nt_m4 versus Rap2.6L_M0036_1.02_CISBP (Rap2.6L:M0036_1.02:CISBP); m=17/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 56.2; ----------smGCCGyma ; cor=0.767; Ncor=0.531; logoDP=2.358; NsEucl=0.907; NSW=0.922; rcor=38; rNcor=17; rlogoDP=207; rNsEucl=7; rNSW=12; rank_mean=56.200; match_rank=17 a 0 0 0 0 0 0 0 0 0 0 18 26 7 4 10 11 18 28 39 c 0 0 0 0 0 0 0 0 0 0 35 44 3 77 80 8 41 46 21 g 0 0 0 0 0 0 0 0 0 0 27 17 89 14 5 75 12 9 19 t 0 0 0 0 0 0 0 0 0 0 20 13 1 5 5 6 29 17 21

DREB1B_MA1669.2_JASPAR_shift12 (DREB1B:MA1669.2:JASPAR) 0.835 0.450 5.010 0.886 0.908 5 112 67 76 24 56.800 18
; oligos_6-8nt_m4 versus DREB1B_MA1669.2_JASPAR (DREB1B:MA1669.2:JASPAR); m=18/241; ncol2=8; w=0; offset=5; strand=D; shift=12; score= 56.8; ------------RCCGACA ; cor=0.835; Ncor=0.450; logoDP=5.010; NsEucl=0.886; NSW=0.908; rcor=5; rNcor=112; rlogoDP=67; rNsEucl=76; rNSW=24; rank_mean=56.800; match_rank=18 a 0 0 0 0 0 0 0 0 0 0 0 0 756 15 13 8 2607 10 2232 c 0 0 0 0 0 0 0 0 0 0 0 0 33 2617 2711 14 44 2697 108 g 0 0 0 0 0 0 0 0 0 0 0 0 1879 21 4 2708 34 12 235 t 0 0 0 0 0 0 0 0 0 0 0 0 68 83 8 6 51 17 161

ERF11_MA1001.1_JASPAR_shift10 (ERF11:MA1001.1:JASPAR) 0.760 0.526 2.714 0.906 0.920 43 19 197 10 15 56.800 19
; oligos_6-8nt_m4 versus ERF11_MA1001.1_JASPAR (ERF11:MA1001.1:JASPAR); m=19/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 56.8; ----------scGCCGyma ; cor=0.760; Ncor=0.526; logoDP=2.714; NsEucl=0.906; NSW=0.920; rcor=43; rNcor=19; rlogoDP=197; rNsEucl=10; rNSW=15; rank_mean=56.800; match_rank=19 a 0 0 0 0 0 0 0 0 0 0 206 213 109 25 145 131 190 258 424 c 0 0 0 0 0 0 0 0 0 0 313 494 0 835 704 10 383 490 162 g 0 0 0 0 0 0 0 0 0 0 316 123 887 55 51 828 154 77 181 t 0 0 0 0 0 0 0 0 0 0 165 169 4 85 99 31 273 175 233

ERF025_MA1752.2_JASPAR_shift11 (ERF025:MA1752.2:JASPAR) 0.764 0.510 5.382 0.879 0.882 40 31 39 105 71 57.200 20
; oligos_6-8nt_m4 versus ERF025_MA1752.2_JASPAR (ERF025:MA1752.2:JASPAR); m=20/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 57.2; -----------yGCCGACA ; cor=0.764; Ncor=0.510; logoDP=5.382; NsEucl=0.879; NSW=0.882; rcor=40; rNcor=31; rlogoDP=39; rNsEucl=105; rNSW=71; rank_mean=57.200; match_rank=20 a 0 0 0 0 0 0 0 0 0 0 0 112 239 0 0 0 940 2 815 c 0 0 0 0 0 0 0 0 0 0 0 356 3 950 1000 0 17 998 3 g 0 0 0 0 0 0 0 0 0 0 0 57 758 0 0 1000 0 0 164 t 0 0 0 0 0 0 0 0 0 0 0 476 0 50 0 0 43 0 18

ATERF-7_M0023_1.02_CISBP_shift11 (ATERF-7:M0023_1.02:CISBP) 0.811 0.463 3.078 0.908 0.933 13 87 186 2 1 57.800 21
; oligos_6-8nt_m4 versus ATERF-7_M0023_1.02_CISBP (ATERF-7:M0023_1.02:CISBP); m=21/241; ncol2=10; w=0; offset=4; strand=D; shift=11; score= 57.8; -----------mGCCGyca ; cor=0.811; Ncor=0.463; logoDP=3.078; NsEucl=0.908; NSW=0.933; rcor=13; rNcor=87; rlogoDP=186; rNsEucl=2; rNSW=1; rank_mean=57.800; match_rank=21 a 0 0 0 0 0 0 0 0 0 0 0 26 8 5 13 9 15 21 42 c 0 0 0 0 0 0 0 0 0 0 0 44 1 87 77 2 45 59 17 g 0 0 0 0 0 0 0 0 0 0 0 14 87 8 4 88 13 7 21 t 0 0 0 0 0 0 0 0 0 0 0 16 4 0 6 1 27 13 20

AT1G75490_M0015_1.02_CISBP_shift10 (AT1G75490:M0015_1.02:CISBP) 0.727 0.545 3.232 0.900 0.910 63 13 179 17 22 58.800 22
; oligos_6-8nt_m4 versus AT1G75490_M0015_1.02_CISBP (AT1G75490:M0015_1.02:CISBP); m=22/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 58.8; ----------scrCCGmyw ; cor=0.727; Ncor=0.545; logoDP=3.232; NsEucl=0.900; NSW=0.910; rcor=63; rNcor=13; rlogoDP=179; rNsEucl=17; rNSW=22; rank_mean=58.800; match_rank=22 a 0 0 0 0 0 0 0 0 0 0 21 22 61 2 3 6 35 22 32 c 0 0 0 0 0 0 0 0 0 0 28 42 0 95 91 0 32 38 24 g 0 0 0 0 0 0 0 0 0 0 27 18 39 3 2 86 12 15 16 t 0 0 0 0 0 0 0 0 0 0 24 18 0 0 4 8 21 25 28

AT2G33710_M0018_1.02_CISBP_shift9 (AT2G33710:M0018_1.02:CISBP) 0.691 0.576 4.597 0.895 0.889 91 8 105 30 61 59.000 23
; oligos_6-8nt_m4 versus AT2G33710_M0018_1.02_CISBP (AT2G33710:M0018_1.02:CISBP); m=23/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 59; ---------gscGCCGcca ; cor=0.691; Ncor=0.576; logoDP=4.597; NsEucl=0.895; NSW=0.889; rcor=91; rNcor=8; rlogoDP=105; rNsEucl=30; rNSW=61; rank_mean=59.000; match_rank=23 a 0 0 0 0 0 0 0 0 0 19 10 22 1 0 4 4 17 23 48 c 0 0 0 0 0 0 0 0 0 24 44 61 0 100 96 3 52 66 13 g 0 0 0 0 0 0 0 0 0 39 35 12 92 0 0 90 10 4 24 t 0 0 0 0 0 0 0 0 0 18 11 5 7 0 0 3 21 7 15

ERF7_MA0993.1_JASPAR_shift11 (ERF7:MA0993.1:JASPAR) 0.809 0.462 3.054 0.908 0.932 14 89 187 3 2 59.000 24
; oligos_6-8nt_m4 versus ERF7_MA0993.1_JASPAR (ERF7:MA0993.1:JASPAR); m=24/241; ncol2=10; w=0; offset=4; strand=D; shift=11; score= 59; -----------mGCCGyca ; cor=0.809; Ncor=0.462; logoDP=3.054; NsEucl=0.908; NSW=0.932; rcor=14; rNcor=89; rlogoDP=187; rNsEucl=3; rNSW=2; rank_mean=59.000; match_rank=24 a 0 0 0 0 0 0 0 0 0 0 0 263 77 48 129 90 146 212 419 c 0 0 0 0 0 0 0 0 0 0 0 442 14 868 770 25 456 593 174 g 0 0 0 0 0 0 0 0 0 0 0 140 874 84 36 875 132 66 210 t 0 0 0 0 0 0 0 0 0 0 0 156 35 0 65 10 266 128 198

ARF7_MA1698.2_JASPAR_shift12 (ARF7:MA1698.2:JASPAR) 0.865 0.432 4.213 0.901 0.931 1 149 134 15 3 60.400 25
; oligos_6-8nt_m4 versus ARF7_MA1698.2_JASPAR (ARF7:MA1698.2:JASPAR); m=25/241; ncol2=9; w=0; offset=5; strand=D; shift=12; score= 60.4; ------------GCCGACr ; cor=0.865; Ncor=0.432; logoDP=4.213; NsEucl=0.901; NSW=0.931; rcor=1; rNcor=149; rlogoDP=134; rNsEucl=15; rNSW=3; rank_mean=60.400; match_rank=25 a 0 0 0 0 0 0 0 0 0 0 0 0 251 113 141 83 3801 18 2657 c 0 0 0 0 0 0 0 0 0 0 0 0 317 3717 3801 120 46 3917 173 g 0 0 0 0 0 0 0 0 0 0 0 0 3325 135 64 3799 176 76 1196 t 0 0 0 0 0 0 0 0 0 0 0 0 172 100 59 63 42 54 39

ERF112_MA1002.1_JASPAR_shift9 (ERF112:MA1002.1:JASPAR) 0.691 0.576 4.492 0.895 0.889 92 9 115 28 60 60.800 26
; oligos_6-8nt_m4 versus ERF112_MA1002.1_JASPAR (ERF112:MA1002.1:JASPAR); m=26/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 60.8; ---------gscGCCGcca ; cor=0.691; Ncor=0.576; logoDP=4.492; NsEucl=0.895; NSW=0.889; rcor=92; rNcor=9; rlogoDP=115; rNsEucl=28; rNSW=60; rank_mean=60.800; match_rank=26 a 0 0 0 0 0 0 0 0 0 189 100 223 15 0 42 36 171 236 478 c 0 0 0 0 0 0 0 0 0 240 436 605 1 997 951 28 518 661 133 g 0 0 0 0 0 0 0 0 0 392 346 117 913 2 4 903 101 37 240 t 0 0 0 0 0 0 0 0 0 180 118 54 72 1 3 33 211 67 150

EREB36_ZmDREB1D_Mo17_1_EEAD0348_EEADannot_shift10 (EREB36_ZmDREB1D_Mo17_1:EEAD0348:EEADannot) 0.734 0.472 6.077 0.880 0.870 56 68 5 93 82 60.800 27
; oligos_6-8nt_m4 versus EREB36_ZmDREB1D_Mo17_1_EEAD0348_EEADannot (EREB36_ZmDREB1D_Mo17_1:EEAD0348:EEADannot); m=27/241; ncol2=11; w=0; offset=3; strand=D; shift=10; score= 60.8; ----------yyGCCGACA ; cor=0.734; Ncor=0.472; logoDP=6.077; NsEucl=0.880; NSW=0.870; rcor=56; rNcor=68; rlogoDP=5; rNsEucl=93; rNSW=82; rank_mean=60.800; match_rank=27 a 0 0 0 0 0 0 0 0 0 0 12 1 2 0 0 0 100 0 81 c 0 0 0 0 0 0 0 0 0 0 34 30 0 94 100 0 0 100 8 g 0 0 0 0 0 0 0 0 0 0 21 14 98 0 0 100 0 0 3 t 0 0 0 0 0 0 0 0 0 0 33 55 0 6 0 0 0 0 8

PK19363.1_M0004_1.02_CISBP_shift11 (PK19363.1:M0004_1.02:CISBP) 0.747 0.498 4.838 0.885 0.893 49 41 81 80 54 61.000 28
; oligos_6-8nt_m4 versus PK19363.1_M0004_1.02_CISBP (PK19363.1:M0004_1.02:CISBP); m=28/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 61; -----------CGCCGcCr ; cor=0.747; Ncor=0.498; logoDP=4.838; NsEucl=0.885; NSW=0.893; rcor=49; rNcor=41; rlogoDP=81; rNsEucl=80; rNSW=54; rank_mean=61.000; match_rank=28 a 0 0 0 0 0 0 0 0 0 0 0 15 3 2 2 0 5 16 49 c 0 0 0 0 0 0 0 0 0 0 0 72 1 87 97 1 63 77 7 g 0 0 0 0 0 0 0 0 0 0 0 8 95 11 1 99 14 1 30 t 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 18 6 14

ATERF-8_M0012_1.02_CISBP_shift11 (ATERF-8:M0012_1.02:CISBP) 0.793 0.453 3.470 0.903 0.925 20 105 168 12 5 62.000 29
; oligos_6-8nt_m4 versus ATERF-8_M0012_1.02_CISBP (ATERF-8:M0012_1.02:CISBP); m=29/241; ncol2=10; w=0; offset=4; strand=D; shift=11; score= 62; -----------cGCCGcca ; cor=0.793; Ncor=0.453; logoDP=3.470; NsEucl=0.903; NSW=0.925; rcor=20; rNcor=105; rlogoDP=168; rNsEucl=12; rNSW=5; rank_mean=62.000; match_rank=29 a 0 0 0 0 0 0 0 0 0 0 0 20 4 1 11 7 15 20 45 c 0 0 0 0 0 0 0 0 0 0 0 57 0 91 81 5 46 60 18 g 0 0 0 0 0 0 0 0 0 0 0 10 96 6 3 85 15 6 18 t 0 0 0 0 0 0 0 0 0 0 0 13 0 2 5 3 24 14 19

AT5G43410_M0037_1.02_CISBP_shift10 (AT5G43410:M0037_1.02:CISBP) 0.728 0.504 3.963 0.895 0.900 61 36 147 29 38 62.200 30
; oligos_6-8nt_m4 versus AT5G43410_M0037_1.02_CISBP (AT5G43410:M0037_1.02:CISBP); m=30/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 62.2; ----------smGCCGcCa ; cor=0.728; Ncor=0.504; logoDP=3.963; NsEucl=0.895; NSW=0.900; rcor=61; rNcor=36; rlogoDP=147; rNsEucl=29; rNSW=38; rank_mean=62.200; match_rank=30 a 0 0 0 0 0 0 0 0 0 0 19 29 3 3 10 4 13 4 38 c 0 0 0 0 0 0 0 0 0 0 30 47 1 91 85 1 59 90 18 g 0 0 0 0 0 0 0 0 0 0 28 16 95 4 2 93 13 2 24 t 0 0 0 0 0 0 0 0 0 0 23 8 1 2 3 2 15 4 20

ERF096_MA0998.1_JASPAR_shift10 (ERF096:MA0998.1:JASPAR) 0.728 0.504 3.886 0.895 0.901 60 34 154 27 37 62.400 31
; oligos_6-8nt_m4 versus ERF096_MA0998.1_JASPAR (ERF096:MA0998.1:JASPAR); m=31/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 62.4; ----------smGCCGcCa ; cor=0.728; Ncor=0.504; logoDP=3.886; NsEucl=0.895; NSW=0.901; rcor=60; rNcor=34; rlogoDP=154; rNsEucl=27; rNSW=37; rank_mean=62.400; match_rank=31 a 0 0 0 0 0 0 0 0 0 0 193 289 34 32 97 43 129 35 384 c 0 0 0 0 0 0 0 0 0 0 300 468 13 905 850 10 591 903 176 g 0 0 0 0 0 0 0 0 0 0 280 167 939 36 21 928 131 24 240 t 0 0 0 0 0 0 0 0 0 0 227 76 13 27 32 19 149 38 200

ERF098_MA0999.1_JASPAR_shift10 (ERF098:MA0999.1:JASPAR) 0.771 0.514 2.162 0.896 0.914 33 29 211 23 18 62.800 32
; oligos_6-8nt_m4 versus ERF098_MA0999.1_JASPAR (ERF098:MA0999.1:JASPAR); m=32/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 62.8; ----------scGCCGcc- ; cor=0.771; Ncor=0.514; logoDP=2.162; NsEucl=0.896; NSW=0.914; rcor=33; rNcor=29; rlogoDP=211; rNsEucl=23; rNSW=18; rank_mean=62.800; match_rank=32 a 0 0 0 0 0 0 0 0 0 0 215 248 96 26 151 192 190 125 0 c 0 0 0 0 0 0 0 0 0 0 317 356 63 746 769 39 448 677 0 g 0 0 0 0 0 0 0 0 0 0 270 222 804 166 10 756 170 99 0 t 0 0 0 0 0 0 0 0 0 0 198 173 37 62 70 13 192 98 0

AT3G23230_M0024_1.02_CISBP_shift10 (AT3G23230:M0024_1.02:CISBP) 0.769 0.512 2.175 0.896 0.913 36 30 210 24 20 64.000 33
; oligos_6-8nt_m4 versus AT3G23230_M0024_1.02_CISBP (AT3G23230:M0024_1.02:CISBP); m=33/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 64; ----------smGCCGcC- ; cor=0.769; Ncor=0.512; logoDP=2.175; NsEucl=0.896; NSW=0.913; rcor=36; rNcor=30; rlogoDP=210; rNsEucl=24; rNSW=20; rank_mean=64.000; match_rank=33 a 0 0 0 0 0 0 0 0 0 0 21 25 10 3 15 19 19 12 0 c 0 0 0 0 0 0 0 0 0 0 32 36 6 75 77 4 45 68 0 g 0 0 0 0 0 0 0 0 0 0 27 22 80 16 1 76 17 10 0 t 0 0 0 0 0 0 0 0 0 0 20 17 4 6 7 1 19 10 0

ATERF-1_M0028_1.02_CISBP_shift10 (ATERF-1:M0028_1.02:CISBP) 0.727 0.545 2.427 0.900 0.910 64 14 206 16 21 64.200 34
; oligos_6-8nt_m4 versus ATERF-1_M0028_1.02_CISBP (ATERF-1:M0028_1.02:CISBP); m=34/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 64.2; ----------smGCCgyCm ; cor=0.727; Ncor=0.545; logoDP=2.427; NsEucl=0.900; NSW=0.910; rcor=64; rNcor=14; rlogoDP=206; rNsEucl=16; rNSW=21; rank_mean=64.200; match_rank=34 a 0 0 0 0 0 0 0 0 0 0 22 30 5 6 13 21 24 13 31 c 0 0 0 0 0 0 0 0 0 0 32 47 0 83 78 9 35 68 32 g 0 0 0 0 0 0 0 0 0 0 26 11 95 5 3 62 13 7 14 t 0 0 0 0 0 0 0 0 0 0 20 12 0 6 6 8 28 12 23

ERF8_MA0994.1_JASPAR_shift11 (ERF8:MA0994.1:JASPAR) 0.790 0.452 3.408 0.903 0.924 23 109 169 14 7 64.400 35
; oligos_6-8nt_m4 versus ERF8_MA0994.1_JASPAR (ERF8:MA0994.1:JASPAR); m=35/241; ncol2=10; w=0; offset=4; strand=D; shift=11; score= 64.4; -----------cGCCGcca ; cor=0.790; Ncor=0.452; logoDP=3.408; NsEucl=0.903; NSW=0.924; rcor=23; rNcor=109; rlogoDP=169; rNsEucl=14; rNSW=7; rank_mean=64.400; match_rank=35 a 0 0 0 0 0 0 0 0 0 0 0 202 38 9 114 75 154 197 449 c 0 0 0 0 0 0 0 0 0 0 0 572 0 908 807 53 452 605 175 g 0 0 0 0 0 0 0 0 0 0 0 97 959 64 31 841 151 58 184 t 0 0 0 0 0 0 0 0 0 0 0 129 3 19 48 31 243 139 192

ERF13_MA1004.2_JASPAR_shift11 (ERF13:MA1004.2:JASPAR) 0.792 0.462 5.195 0.878 0.895 21 91 58 108 49 65.400 36
; oligos_6-8nt_m4 versus ERF13_MA1004.2_JASPAR (ERF13:MA1004.2:JASPAR); m=36/241; ncol2=7; w=0; offset=4; strand=D; shift=11; score= 65.4; -----------sGCCGcC- ; cor=0.792; Ncor=0.462; logoDP=5.195; NsEucl=0.878; NSW=0.895; rcor=21; rNcor=91; rlogoDP=58; rNsEucl=108; rNSW=49; rank_mean=65.400; match_rank=36 a 0 0 0 0 0 0 0 0 0 0 0 217 0 16 0 0 97 0 0 c 0 0 0 0 0 0 0 0 0 0 0 478 49 951 983 16 645 999 0 g 0 0 0 0 0 0 0 0 0 0 0 283 951 32 16 983 145 0 0 t 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 113 0 0

ERF2_M0038_1.02_CISBP_shift9 (ERF2:M0038_1.02:CISBP) 0.720 0.600 1.734 0.903 0.906 75 2 212 13 28 66.000 37
; oligos_6-8nt_m4 versus ERF2_M0038_1.02_CISBP (ERF2:M0038_1.02:CISBP); m=37/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 66; ---------hsmGCCGcCa ; cor=0.720; Ncor=0.600; logoDP=1.734; NsEucl=0.903; NSW=0.906; rcor=75; rNcor=2; rlogoDP=212; rNsEucl=13; rNSW=28; rank_mean=66.000; match_rank=37 a 0 0 0 0 0 0 0 0 0 26 23 29 14 10 17 16 18 12 34 c 0 0 0 0 0 0 0 0 0 26 27 32 8 69 70 2 46 68 22 g 0 0 0 0 0 0 0 0 0 20 27 24 72 14 4 78 15 9 22 t 0 0 0 0 0 0 0 0 0 28 23 15 6 7 9 4 21 11 22

ATERF15_M0017_1.02_CISBP_rc_shift11 (ATERF15:M0017_1.02:CISBP_rc) 0.756 0.504 2.839 0.893 0.908 46 35 193 33 25 66.400 38
; oligos_6-8nt_m4 versus ATERF15_M0017_1.02_CISBP_rc (ATERF15:M0017_1.02:CISBP_rc); m=38/241; ncol2=8; w=0; offset=4; strand=R; shift=11; score= 66.4; -----------gGCCGsCg ; cor=0.756; Ncor=0.504; logoDP=2.839; NsEucl=0.893; NSW=0.908; rcor=46; rNcor=35; rlogoDP=193; rNsEucl=33; rNSW=25; rank_mean=66.400; match_rank=38 a 0 0 0 0 0 0 0 0 0 0 0 14 3 3 5 3 3 3 17 c 0 0 0 0 0 0 0 0 0 0 0 17 3 71 84 5 34 89 13 g 0 0 0 0 0 0 0 0 0 0 0 59 91 23 3 89 61 5 50 t 0 0 0 0 0 0 0 0 0 0 0 10 3 3 8 3 2 3 20

0100010458_M0076_1.02_CISBP_shift11 (0100010458:M0076_1.02:CISBP) 0.731 0.487 5.491 0.874 0.872 58 52 26 119 80 67.000 39
; oligos_6-8nt_m4 versus 0100010458_M0076_1.02_CISBP (0100010458:M0076_1.02:CISBP); m=39/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 67; -----------cGCCGCCr ; cor=0.731; Ncor=0.487; logoDP=5.491; NsEucl=0.874; NSW=0.872; rcor=58; rNcor=52; rlogoDP=26; rNsEucl=119; rNSW=80; rank_mean=67.000; match_rank=39 a 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 2 0 58 c 0 0 0 0 0 0 0 0 0 0 0 60 0 92 98 0 71 100 3 g 0 0 0 0 0 0 0 0 0 0 0 14 100 8 2 100 21 0 32 t 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 6 0 7

ERF027_MA1227.3_JASPAR_shift12 (ERF027:MA1227.3:JASPAR) 0.805 0.470 4.785 0.877 0.895 15 73 86 110 52 67.200 40
; oligos_6-8nt_m4 versus ERF027_MA1227.3_JASPAR (ERF027:MA1227.3:JASPAR); m=40/241; ncol2=7; w=0; offset=5; strand=D; shift=12; score= 67.2; ------------rCCGACA ; cor=0.805; Ncor=0.470; logoDP=4.785; NsEucl=0.877; NSW=0.895; rcor=15; rNcor=73; rlogoDP=86; rNsEucl=110; rNSW=52; rank_mean=67.200; match_rank=40 a 0 0 0 0 0 0 0 0 0 0 0 0 2993 59 49 38 7473 27 7176 c 0 0 0 0 0 0 0 0 0 0 0 0 257 7829 8069 30 249 8089 100 g 0 0 0 0 0 0 0 0 0 0 0 0 4656 39 15 8067 83 22 562 t 0 0 0 0 0 0 0 0 0 0 0 0 259 238 32 30 360 27 327

DREB1A_MA0971.1_JASPAR_rc_shift10 (DREB1A:MA0971.1:JASPAR_rc) 0.723 0.500 4.560 0.887 0.886 71 38 110 63 65 69.400 41
; oligos_6-8nt_m4 versus DREB1A_MA0971.1_JASPAR_rc (DREB1A:MA0971.1:JASPAR_rc); m=41/241; ncol2=10; w=0; offset=3; strand=R; shift=10; score= 69.4; ----------yyrCCGACa ; cor=0.723; Ncor=0.500; logoDP=4.560; NsEucl=0.887; NSW=0.886; rcor=71; rNcor=38; rlogoDP=110; rNsEucl=63; rNSW=65; rank_mean=69.400; match_rank=41 a 0 0 0 0 0 0 0 0 0 0 152 140 461 3 6 1 973 1 565 c 0 0 0 0 0 0 0 0 0 0 322 279 19 948 994 4 3 997 137 g 0 0 0 0 0 0 0 0 0 0 205 240 504 0 0 991 14 0 159 t 0 0 0 0 0 0 0 0 0 0 322 341 16 48 0 5 10 2 139

AT4G16750_M0026_1.02_CISBP_rc_shift10 (AT4G16750:M0026_1.02:CISBP_rc) 0.719 0.498 3.951 0.892 0.896 76 40 148 37 48 69.800 42
; oligos_6-8nt_m4 versus AT4G16750_M0026_1.02_CISBP_rc (AT4G16750:M0026_1.02:CISBP_rc); m=42/241; ncol2=10; w=0; offset=3; strand=R; shift=10; score= 69.8; ----------yyrCCGaCa ; cor=0.719; Ncor=0.498; logoDP=3.951; NsEucl=0.892; NSW=0.896; rcor=76; rNcor=40; rlogoDP=148; rNsEucl=37; rNSW=48; rank_mean=69.800; match_rank=42 a 0 0 0 0 0 0 0 0 0 0 20 19 52 1 1 0 66 3 47 c 0 0 0 0 0 0 0 0 0 0 32 39 4 97 98 0 14 92 12 g 0 0 0 0 0 0 0 0 0 0 22 17 42 0 0 99 9 1 24 t 0 0 0 0 0 0 0 0 0 0 26 25 2 2 1 1 11 4 17

DREB1F_MA1748.2_JASPAR_shift12 (DREB1F:MA1748.2:JASPAR) 0.858 0.429 4.408 0.887 0.924 2 161 118 62 8 70.200 43
; oligos_6-8nt_m4 versus DREB1F_MA1748.2_JASPAR (DREB1F:MA1748.2:JASPAR); m=43/241; ncol2=6; w=0; offset=5; strand=D; shift=12; score= 70.2; ------------rCCGAC- ; cor=0.858; Ncor=0.429; logoDP=4.408; NsEucl=0.887; NSW=0.924; rcor=2; rNcor=161; rlogoDP=118; rNsEucl=62; rNSW=8; rank_mean=70.200; match_rank=43 a 0 0 0 0 0 0 0 0 0 0 0 0 259 3 0 4 962 20 0 c 0 0 0 0 0 0 0 0 0 0 0 0 68 767 982 1 19 970 0 g 0 0 0 0 0 0 0 0 0 0 0 0 638 7 14 993 4 9 0 t 0 0 0 0 0 0 0 0 0 0 0 0 35 222 4 2 15 0 0

ERF039_MA0995.1_JASPAR_rc_shift10 (ERF039:MA0995.1:JASPAR_rc) 0.719 0.498 3.899 0.892 0.896 77 42 152 36 47 70.800 44
; oligos_6-8nt_m4 versus ERF039_MA0995.1_JASPAR_rc (ERF039:MA0995.1:JASPAR_rc); m=44/241; ncol2=10; w=0; offset=3; strand=R; shift=10; score= 70.8; ----------ycrCCGaCa ; cor=0.719; Ncor=0.498; logoDP=3.899; NsEucl=0.892; NSW=0.896; rcor=77; rNcor=42; rlogoDP=152; rNsEucl=36; rNSW=47; rank_mean=70.800; match_rank=44 a 0 0 0 0 0 0 0 0 0 0 198 190 524 7 12 5 660 34 473 c 0 0 0 0 0 0 0 0 0 0 316 395 39 965 980 2 140 912 120 g 0 0 0 0 0 0 0 0 0 0 225 170 416 8 2 989 86 11 242 t 0 0 0 0 0 0 0 0 0 0 261 244 20 19 6 4 115 43 165

ARF5_MA0943.2_JASPAR_shift12 (ARF5:MA0943.2:JASPAR) 0.798 0.466 4.351 0.880 0.899 17 80 124 94 40 71.000 45
; oligos_6-8nt_m4 versus ARF5_MA0943.2_JASPAR (ARF5:MA0943.2:JASPAR); m=45/241; ncol2=7; w=0; offset=5; strand=D; shift=12; score= 71; ------------rCCGACA ; cor=0.798; Ncor=0.466; logoDP=4.351; NsEucl=0.880; NSW=0.899; rcor=17; rNcor=80; rlogoDP=124; rNsEucl=94; rNSW=40; rank_mean=71.000; match_rank=45 a 0 0 0 0 0 0 0 0 0 0 0 0 303 9 97 12 952 2 773 c 0 0 0 0 0 0 0 0 0 0 0 0 160 969 898 1 1 992 224 g 0 0 0 0 0 0 0 0 0 0 0 0 477 15 4 985 46 3 2 t 0 0 0 0 0 0 0 0 0 0 0 0 59 8 2 2 1 3 2

ERF025_MA1752.1_JASPAR_shift7 (ERF025:MA1752.1:JASPAR) 0.615 0.492 5.406 0.893 0.861 145 48 34 34 96 71.400 46
; oligos_6-8nt_m4 versus ERF025_MA1752.1_JASPAR (ERF025:MA1752.1:JASPAR); m=46/241; ncol2=15; w=0; offset=0; strand=D; shift=7; score= 71.4; -------yykyyGCCGACA ; cor=0.615; Ncor=0.492; logoDP=5.406; NsEucl=0.893; NSW=0.861; rcor=145; rNcor=48; rlogoDP=34; rNsEucl=34; rNSW=96; rank_mean=71.400; match_rank=46 a 0 0 0 0 0 0 0 245 210 194 129 112 239 0 0 0 939.9 1.669 815 c 0 0 0 0 0 0 0 326 341 172 342 356 3.339 950 1000 0 16.694 998 3.339 g 0 0 0 0 0 0 0 129 137 257 76.795 56.761 757.93 0 0 1000 0 0 164 t 0 0 0 0 0 0 0 301 312 377 452 476 0 50.083 0 0 43.406 0 18.364

ERF3_M0011_1.02_CISBP_shift11 (ERF3:M0011_1.02:CISBP) 0.728 0.485 5.284 0.875 0.875 62 55 48 114 78 71.400 47
; oligos_6-8nt_m4 versus ERF3_M0011_1.02_CISBP (ERF3:M0011_1.02:CISBP); m=47/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 71.4; -----------CGCCGcCr ; cor=0.728; Ncor=0.485; logoDP=5.284; NsEucl=0.875; NSW=0.875; rcor=62; rNcor=55; rlogoDP=48; rNsEucl=114; rNSW=78; rank_mean=71.400; match_rank=47 a 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 1 6 8 58 c 0 0 0 0 0 0 0 0 0 0 0 76 0 89 99 0 64 90 2 g 0 0 0 0 0 0 0 0 0 0 0 8 99 11 1 99 19 0 28 t 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 11 2 12

EREB127_MA2414.1_JASPAR_shift11 (EREB127:MA2414.1:JASPAR) 0.742 0.495 5.243 0.871 0.868 52 44 53 126 87 72.400 48
; oligos_6-8nt_m4 versus EREB127_MA2414.1_JASPAR (EREB127:MA2414.1:JASPAR); m=48/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 72.4; -----------TRCCGACA ; cor=0.742; Ncor=0.495; logoDP=5.243; NsEucl=0.871; NSW=0.868; rcor=52; rNcor=44; rlogoDP=53; rNsEucl=126; rNSW=87; rank_mean=72.400; match_rank=48 a 0 0 0 0 0 0 0 0 0 0 0 378 1327 15 22 9 4560 6 4221 c 0 0 0 0 0 0 0 0 0 0 0 655 47 4769 4856 5 87 4872 99 g 0 0 0 0 0 0 0 0 0 0 0 410 3502 16 6 4871 35 8 367 t 0 0 0 0 0 0 0 0 0 0 0 3452 19 95 11 10 213 9 208

DREB1C_MA1670.1_JASPAR_shift8 (DREB1C:MA1670.1:JASPAR) 0.673 0.462 4.910 0.895 0.879 104 88 72 26 75 73.000 49
; oligos_6-8nt_m4 versus DREB1C_MA1670.1_JASPAR (DREB1C:MA1670.1:JASPAR); m=49/241; ncol2=15; w=0; offset=1; strand=D; shift=8; score= 73; --------wwttRCCGACA ; cor=0.673; Ncor=0.462; logoDP=4.910; NsEucl=0.895; NSW=0.879; rcor=104; rNcor=88; rlogoDP=72; rNsEucl=26; rNSW=75; rank_mean=73.000; match_rank=49 a 0 0 0 0 0 0 0 0 2439 2252 1988 1562 2243 59 43 43 8318 28 6267 c 0 0 0 0 0 0 0 0 2044 1566 1872 1719 45 7517 8357 38 50 8363 594 g 0 0 0 0 0 0 0 0 1220 1900 1172 1265 6059 35 15 8333 48 26 647 t 0 0 0 0 0 0 0 0 2749 2734 3420 3906 105 841 37 38 36 35 944

ERF3_MA1005.1_JASPAR_shift11 (ERF3:MA1005.1:JASPAR) 0.725 0.484 5.200 0.875 0.875 65 56 56 116 79 74.400 50
; oligos_6-8nt_m4 versus ERF3_MA1005.1_JASPAR (ERF3:MA1005.1:JASPAR); m=50/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 74.4; -----------CGCCGcCr ; cor=0.725; Ncor=0.484; logoDP=5.200; NsEucl=0.875; NSW=0.875; rcor=65; rNcor=56; rlogoDP=56; rNsEucl=116; rNSW=79; rank_mean=74.400; match_rank=50 a 0 0 0 0 0 0 0 0 0 0 0 80 14 0 0 14 57 79 581 c 0 0 0 0 0 0 0 0 0 0 0 760 0 885 985 0 643 904 23 g 0 0 0 0 0 0 0 0 0 0 0 80 985 114 14 985 186 0 279 t 0 0 0 0 0 0 0 0 0 0 0 80 0 0 0 0 114 16 116

ERF5_M0039_1.02_CISBP_shift9 (ERF5:M0039_1.02:CISBP) 0.699 0.583 1.111 0.899 0.897 85 4 219 20 44 74.400 51
; oligos_6-8nt_m4 versus ERF5_M0039_1.02_CISBP (ERF5:M0039_1.02:CISBP); m=51/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 74.4; ---------hsmGccgccm ; cor=0.699; Ncor=0.583; logoDP=1.111; NsEucl=0.899; NSW=0.897; rcor=85; rNcor=4; rlogoDP=219; rNsEucl=20; rNSW=44; rank_mean=74.400; match_rank=51 a 0 0 0 0 0 0 0 0 0 27 23 28 14 12 19 21 20 17 32 c 0 0 0 0 0 0 0 0 0 28 27 37 6 61 67 12 35 60 30 g 0 0 0 0 0 0 0 0 0 20 27 18 75 18 7 59 21 11 17 t 0 0 0 0 0 0 0 0 0 25 23 17 5 9 7 8 24 12 21

ORA59_M0005_1.02_CISBP_shift11 (ORA59:M0005_1.02:CISBP) 0.724 0.483 5.422 0.871 0.867 67 58 33 129 88 75.000
; oligos_6-8nt_m4 versus ORA59_M0005_1.02_CISBP (ORA59:M0005_1.02:CISBP); m=52/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 75; -----------mGCCGCCg ; cor=0.724; Ncor=0.483; logoDP=5.422; NsEucl=0.871; NSW=0.867; rcor=67; rNcor=58; rlogoDP=33; rNsEucl=129; rNSW=88; rank_mean=75.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 35 0 0 12 2 0 0 24 c 0 0 0 0 0 0 0 0 0 0 0 46 0 100 88 0 95 100 11 g 0 0 0 0 0 0 0 0 0 0 0 19 100 0 0 98 5 0 48 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17

ARF29_MA1692.1_JASPAR_shift8 (ARF29:MA1692.1:JASPAR) 0.689 0.474 4.045 0.899 0.887 94 64 138 19 62 75.400
; oligos_6-8nt_m4 versus ARF29_MA1692.1_JASPAR (ARF29:MA1692.1:JASPAR); m=53/241; ncol2=15; w=0; offset=1; strand=D; shift=8; score= 75.4; --------cmtwGCCGACA ; cor=0.689; Ncor=0.474; logoDP=4.045; NsEucl=0.899; NSW=0.887; rcor=94; rNcor=64; rlogoDP=138; rNsEucl=19; rNSW=62; rank_mean=75.400; match_rank= a 0 0 0 0 0 0 0 0 1242 1450 1269 1475 468 200 576 83 5053 16 4801 c 0 0 0 0 0 0 0 0 1455 1357 1239 1102 468 4649 4459 16 43 5154 289 g 0 0 0 0 0 0 0 0 1310 1244 1117 1278 3994 147 116 5091 120 36 121 t 0 0 0 0 0 0 0 0 1234 1190 1616 1386 311 245 90 51 25 35 30

RAP2.2_M0021_1.02_CISBP_shift10 (RAP2.2:M0021_1.02:CISBP) 0.763 0.508 1.601 0.889 0.901 41 32 213 56 36 75.600
; oligos_6-8nt_m4 versus RAP2.2_M0021_1.02_CISBP (RAP2.2:M0021_1.02:CISBP); m=54/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 75.6; ----------wkgsyGsc- ; cor=0.763; Ncor=0.508; logoDP=1.601; NsEucl=0.889; NSW=0.901; rcor=41; rNcor=32; rlogoDP=213; rNsEucl=56; rNSW=36; rank_mean=75.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 26 24 22 11 1 21 15 23 0 c 0 0 0 0 0 0 0 0 0 0 24 22 7 50 66 0 33 35 0 g 0 0 0 0 0 0 0 0 0 0 21 26 58 25 0 78 28 23 0 t 0 0 0 0 0 0 0 0 0 0 29 28 13 14 33 1 24 19 0

CBF2_MA1217.1_JASPAR_shift7 (CBF2:MA1217.1:JASPAR) 0.608 0.486 5.402 0.892 0.860 154 53 36 41 99 76.600
; oligos_6-8nt_m4 versus CBF2_MA1217.1_JASPAR (CBF2:MA1217.1:JASPAR); m=55/241; ncol2=15; w=0; offset=0; strand=D; shift=7; score= 76.6; -------hytyyrCCGACA ; cor=0.608; Ncor=0.486; logoDP=5.402; NsEucl=0.892; NSW=0.860; rcor=154; rNcor=53; rlogoDP=36; rNsEucl=41; rNSW=99; rank_mean=76.600; match_rank= a 0 0 0 0 0 0 0 160 137 143 91 51 294 0 0 0 595 0 489 c 0 0 0 0 0 0 0 173 202 115 170 223 0 582 595 0 0 595 24 g 0 0 0 0 0 0 0 83 84 135 57 97 301 0 0 595 0 0 49 t 0 0 0 0 0 0 0 179 172 202 277 224 0 13 0 0 0 0 33

ERF094_MA1049.1_JASPAR_shift11 (ERF094:MA1049.1:JASPAR) 0.723 0.482 5.383 0.871 0.866 68 59 38 130 89 76.800
; oligos_6-8nt_m4 versus ERF094_MA1049.1_JASPAR (ERF094:MA1049.1:JASPAR); m=56/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 76.8; -----------mGCCGCCg ; cor=0.723; Ncor=0.482; logoDP=5.383; NsEucl=0.871; NSW=0.866; rcor=68; rNcor=59; rlogoDP=38; rNsEucl=130; rNSW=89; rank_mean=76.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 346 0 0 122 25 0 0 241 c 0 0 0 0 0 0 0 0 0 0 0 461 0 999 877 0 951 999 104 g 0 0 0 0 0 0 0 0 0 0 0 192 999 0 0 975 49 0 482 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 173

ORA47_M0014_1.02_CISBP_shift11 (ORA47:M0014_1.02:CISBP) 0.739 0.455 3.294 0.892 0.907 53 101 171 39 27 78.200
; oligos_6-8nt_m4 versus ORA47_M0014_1.02_CISBP (ORA47:M0014_1.02:CISBP); m=57/241; ncol2=9; w=0; offset=4; strand=D; shift=11; score= 78.2; -----------yrCCGwCc ; cor=0.739; Ncor=0.455; logoDP=3.294; NsEucl=0.892; NSW=0.907; rcor=53; rNcor=101; rlogoDP=171; rNsEucl=39; rNSW=27; rank_mean=78.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 17 49 4 3 6 35 7 23 c 0 0 0 0 0 0 0 0 0 0 0 40 1 90 94 0 19 81 49 g 0 0 0 0 0 0 0 0 0 0 0 16 40 2 0 91 19 5 10 t 0 0 0 0 0 0 0 0 0 0 0 27 10 4 3 3 27 7 18

Auxin_6ycq_AB_3D-footprint_shift0 (Auxin:6ycq_AB:3D-footprint) 0.696 0.417 5.256 0.905 0.893 87 188 50 11 55 78.200
; oligos_6-8nt_m4 versus Auxin_6ycq_AB_3D-footprint (Auxin:6ycq_AB:3D-footprint); m=58/241; ncol2=20; w=-7; offset=-7; strand=D; shift=0; score= 78.2; TGTCGGtnnnnnGCCGACA ; cor=0.696; Ncor=0.417; logoDP=5.256; NsEucl=0.905; NSW=0.893; rcor=87; rNcor=188; rlogoDP=50; rNsEucl=11; rNSW=55; rank_mean=78.200; match_rank= a 0 0 4 0 0 4 6 24 24 24 24 24 0 4 0 0 72 0 96 c 0 0 12 96 0 7 19 24 24 24 24 24 0 76 96 0 9 96 0 g 0 96 4 0 96 76 9 24 24 24 24 24 96 9 0 96 9 0 0 t 96 0 76 0 0 9 62 24 24 24 24 24 0 7 0 0 6 0 0

RAP2.6_M0010_1.02_CISBP_shift10 (RAP2.6:M0010_1.02:CISBP) 0.738 0.492 2.222 0.890 0.904 54 50 209 49 32 78.800
; oligos_6-8nt_m4 versus RAP2.6_M0010_1.02_CISBP (RAP2.6:M0010_1.02:CISBP); m=59/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 78.8; ----------syGCcGkc- ; cor=0.738; Ncor=0.492; logoDP=2.222; NsEucl=0.890; NSW=0.904; rcor=54; rNcor=50; rlogoDP=209; rNsEucl=49; rNSW=32; rank_mean=78.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 18 11 5 4 3 14 18 20 0 c 0 0 0 0 0 0 0 0 0 0 26 38 0 78 63 9 19 48 0 g 0 0 0 0 0 0 0 0 0 0 32 18 95 5 11 70 36 10 0 t 0 0 0 0 0 0 0 0 0 0 24 33 0 13 23 7 27 22 0

ERF039_MA0995.3_JASPAR_shift12 (ERF039:MA0995.3:JASPAR) 0.792 0.462 4.617 0.875 0.890 22 92 104 117 59 78.800
; oligos_6-8nt_m4 versus ERF039_MA0995.3_JASPAR (ERF039:MA0995.3:JASPAR); m=60/241; ncol2=7; w=0; offset=5; strand=D; shift=12; score= 78.8; ------------rCCGACA ; cor=0.792; Ncor=0.462; logoDP=4.617; NsEucl=0.875; NSW=0.890; rcor=22; rNcor=92; rlogoDP=104; rNsEucl=117; rNSW=59; rank_mean=78.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 679 3 11 19 1381 1 1521 c 0 0 0 0 0 0 0 0 0 0 0 0 23 1617 1605 13 137 1615 21 g 0 0 0 0 0 0 0 0 0 0 0 0 864 23 10 1605 45 15 72 t 0 0 0 0 0 0 0 0 0 0 0 0 78 1 18 7 81 13 30

bZIP18_2_EEAD0135_EEADannot_shift7 (bZIP18_2:EEAD0135:EEADannot) 0.635 0.582 5.451 0.879 0.839 124 5 30 98 137 78.800
; oligos_6-8nt_m4 versus bZIP18_2_EEAD0135_EEADannot (bZIP18_2:EEAD0135:EEADannot); m=61/241; ncol2=11; w=0; offset=0; strand=D; shift=7; score= 78.8; -------kmCAGGCTGkm- ; cor=0.635; Ncor=0.582; logoDP=5.451; NsEucl=0.879; NSW=0.839; rcor=124; rNcor=5; rlogoDP=30; rNsEucl=98; rNSW=137; rank_mean=78.800; match_rank= a 0 0 0 0 0 0 0 4 49 0 82 0 16 0 0 0 0 38 0 c 0 0 0 0 0 0 0 0 33 82 0 5 0 76 0 0 0 22 0 g 0 0 0 0 0 0 0 51 0 0 0 77 64 6 0 82 34 6 0 t 0 0 0 0 0 0 0 27 0 0 0 0 2 0 82 0 48 16 0

ERF096_MA0998.2_JASPAR_shift12 (ERF096:MA0998.2:JASPAR) 0.846 0.423 3.865 0.888 0.925 3 176 155 58 6 79.600
; oligos_6-8nt_m4 versus ERF096_MA0998.2_JASPAR (ERF096:MA0998.2:JASPAR); m=62/241; ncol2=6; w=0; offset=5; strand=D; shift=12; score= 79.6; ------------GCCGcC- ; cor=0.846; Ncor=0.423; logoDP=3.865; NsEucl=0.888; NSW=0.925; rcor=3; rNcor=176; rlogoDP=155; rNsEucl=58; rNSW=6; rank_mean=79.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 34 32 97 43 129 35 0 c 0 0 0 0 0 0 0 0 0 0 0 0 13 905 850 10 591 903 0 g 0 0 0 0 0 0 0 0 0 0 0 0 939 36 21 928 131 24 0 t 0 0 0 0 0 0 0 0 0 0 0 0 13 27 32 19 149 38 0

RAP2-10_MA0980.3_JASPAR_shift12 (RAP2-10:MA0980.3:JASPAR) 0.788 0.460 4.991 0.869 0.880 24 96 68 137 73 79.600
; oligos_6-8nt_m4 versus RAP2-10_MA0980.3_JASPAR (RAP2-10:MA0980.3:JASPAR); m=63/241; ncol2=7; w=0; offset=5; strand=D; shift=12; score= 79.6; ------------rCCGACA ; cor=0.788; Ncor=0.460; logoDP=4.991; NsEucl=0.869; NSW=0.880; rcor=24; rNcor=96; rlogoDP=68; rNsEucl=137; rNSW=73; rank_mean=79.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 1041 16 9 16 2503 10 2443 c 0 0 0 0 0 0 0 0 0 0 0 0 48 2516 2544 6 19 2539 29 g 0 0 0 0 0 0 0 0 0 0 0 0 1374 6 9 2534 10 7 65 t 0 0 0 0 0 0 0 0 0 0 0 0 105 30 6 12 36 12 31

ASR1_MA1812.1_JASPAR_shift7 (ASR1:MA1812.1:JASPAR) 0.626 0.501 4.726 0.891 0.858 130 37 89 44 104 80.800
; oligos_6-8nt_m4 versus ASR1_MA1812.1_JASPAR (ASR1:MA1812.1:JASPAR); m=64/241; ncol2=15; w=0; offset=0; strand=D; shift=7; score= 80.8; -------wwyAGGCCCAAw ; cor=0.626; Ncor=0.501; logoDP=4.726; NsEucl=0.891; NSW=0.858; rcor=130; rNcor=37; rlogoDP=89; rNsEucl=44; rNSW=104; rank_mean=80.800; match_rank= a 0 0 0 0 0 0 0 53 42 33 124 20 1 0 0 0 149 111 41 c 0 0 0 0 0 0 0 36 34 51 10 1 0 153 156 155 1 6 14 g 0 0 0 0 0 0 0 19 35 24 5 135 155 0 0 0 6 7 7 t 0 0 0 0 0 0 0 48 45 48 17 0 0 3 0 1 0 32 94

ARF29_MA1692.2_JASPAR_shift12 (ARF29:MA1692.2:JASPAR) 0.815 0.439 4.043 0.882 0.902 9 137 140 86 35 81.400
; oligos_6-8nt_m4 versus ARF29_MA1692.2_JASPAR (ARF29:MA1692.2:JASPAR); m=65/241; ncol2=8; w=0; offset=5; strand=D; shift=12; score= 81.4; ------------GCCGACA ; cor=0.815; Ncor=0.439; logoDP=4.043; NsEucl=0.882; NSW=0.902; rcor=9; rNcor=137; rlogoDP=140; rNsEucl=86; rNSW=35; rank_mean=81.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 468 200 576 83 5053 16 4801 c 0 0 0 0 0 0 0 0 0 0 0 0 468 4649 4459 16 43 5154 289 g 0 0 0 0 0 0 0 0 0 0 0 0 3994 147 116 5091 120 36 121 t 0 0 0 0 0 0 0 0 0 0 0 0 311 245 90 51 25 35 30

AT5G07580_M0035_1.02_CISBP_rc_shift10 (AT5G07580:M0035_1.02:CISBP_rc) 0.694 0.520 0.740 0.894 0.898 89 25 224 32 42 82.400
; oligos_6-8nt_m4 versus AT5G07580_M0035_1.02_CISBP_rc (AT5G07580:M0035_1.02:CISBP_rc); m=66/241; ncol2=9; w=0; offset=3; strand=R; shift=10; score= 82.4; ----------vrgcCRscr ; cor=0.694; Ncor=0.520; logoDP=0.740; NsEucl=0.894; NSW=0.898; rcor=89; rNcor=25; rlogoDP=224; rNsEucl=32; rNSW=42; rank_mean=82.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 26 30 23 21 11 31 18 14 40 c 0 0 0 0 0 0 0 0 0 0 25 21 13 48 70 0 36 67 20 g 0 0 0 0 0 0 0 0 0 0 26 32 48 19 6 68 35 10 27 t 0 0 0 0 0 0 0 0 0 0 23 17 16 12 13 1 11 9 13

ATERF-4_M0022_1.02_CISBP_shift10 (ATERF-4:M0022_1.02:CISBP) 0.706 0.471 4.986 0.872 0.869 79 71 69 122 83 84.800
; oligos_6-8nt_m4 versus ATERF-4_M0022_1.02_CISBP (ATERF-4:M0022_1.02:CISBP); m=67/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 84.8; ----------cCGCCGcC- ; cor=0.706; Ncor=0.471; logoDP=4.986; NsEucl=0.872; NSW=0.869; rcor=79; rNcor=71; rlogoDP=69; rNsEucl=122; rNSW=83; rank_mean=84.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 17 6 2 1 1 1 6 12 0 c 0 0 0 0 0 0 0 0 0 0 52 73 2 90 98 0 66 80 0 g 0 0 0 0 0 0 0 0 0 0 22 12 95 8 1 99 13 4 0 t 0 0 0 0 0 0 0 0 0 0 9 9 1 1 0 0 15 4 0

RAP2-4_MA1795.2_JASPAR_shift11 (RAP2-4:MA1795.2:JASPAR) 0.721 0.480 3.277 0.886 0.897 74 63 173 69 46 85.000
; oligos_6-8nt_m4 versus RAP2-4_MA1795.2_JASPAR (RAP2-4:MA1795.2:JASPAR); m=68/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 85; -----------crCCGaCm ; cor=0.721; Ncor=0.480; logoDP=3.277; NsEucl=0.886; NSW=0.897; rcor=74; rNcor=63; rlogoDP=173; rNsEucl=69; rNSW=46; rank_mean=85.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 181 584 1 1 93 497 99 271 c 0 0 0 0 0 0 0 0 0 0 0 554 0 933 968 7 242 822 550 g 0 0 0 0 0 0 0 0 0 0 0 129 416 65 0 787 80 0 52 t 0 0 0 0 0 0 0 0 0 0 0 137 0 0 31 113 181 78 127

ERF008_MA0979.1_JASPAR_shift11 (ERF008:MA0979.1:JASPAR) 0.725 0.483 3.241 0.885 0.895 66 57 177 77 50 85.400
; oligos_6-8nt_m4 versus ERF008_MA0979.1_JASPAR (ERF008:MA0979.1:JASPAR); m=69/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 85.4; -----------CrCCGmCs ; cor=0.725; Ncor=0.483; logoDP=3.241; NsEucl=0.885; NSW=0.895; rcor=66; rNcor=57; rlogoDP=177; rNsEucl=77; rNSW=50; rank_mean=85.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 148 335 27 39 66 320 70 100 c 0 0 0 0 0 0 0 0 0 0 0 787 15 889 934 44 524 828 417 g 0 0 0 0 0 0 0 0 0 0 0 24 634 58 19 865 56 68 329 t 0 0 0 0 0 0 0 0 0 0 0 41 17 26 8 26 101 34 154

ERF4_MA0992.1_JASPAR_shift10 (ERF4:MA0992.1:JASPAR) 0.705 0.470 4.949 0.872 0.869 80 72 71 123 84 86.000
; oligos_6-8nt_m4 versus ERF4_MA0992.1_JASPAR (ERF4:MA0992.1:JASPAR); m=70/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 86; ----------cCGCCGcC- ; cor=0.705; Ncor=0.470; logoDP=4.949; NsEucl=0.872; NSW=0.869; rcor=80; rNcor=72; rlogoDP=71; rNsEucl=123; rNSW=84; rank_mean=86.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 169 65 24 12 12 6 56 123 0 c 0 0 0 0 0 0 0 0 0 0 517 726 18 899 976 6 662 800 0 g 0 0 0 0 0 0 0 0 0 0 225 115 952 83 12 988 131 39 0 t 0 0 0 0 0 0 0 0 0 0 90 94 6 6 0 0 150 39 0

ARF5_MA0943.1_JASPAR_shift12 (ARF5:MA0943.1:JASPAR) 0.798 0.430 4.351 0.880 0.899 17 158 124 94 40 86.600
; oligos_6-8nt_m4 versus ARF5_MA0943.1_JASPAR (ARF5:MA0943.1:JASPAR); m=71/241; ncol2=8; w=0; offset=5; strand=D; shift=12; score= 86.6; ------------rCCGACA ; cor=0.798; Ncor=0.430; logoDP=4.351; NsEucl=0.880; NSW=0.899; rcor=17; rNcor=158; rlogoDP=124; rNsEucl=94; rNSW=40; rank_mean=86.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 303 9 97 12 952 2 773 c 0 0 0 0 0 0 0 0 0 0 0 0 160 969 898 1 1 992 224 g 0 0 0 0 0 0 0 0 0 0 0 0 477 15 4 985 46 3 2 t 0 0 0 0 0 0 0 0 0 0 0 0 59 8 2 2 1 3 2

ERF1_M0025_1.02_CISBP_shift10 (ERF1:M0025_1.02:CISBP) 0.676 0.468 6.103 0.870 0.849 100 76 4 132 123 87.000
; oligos_6-8nt_m4 versus ERF1_M0025_1.02_CISBP (ERF1:M0025_1.02:CISBP); m=72/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 87; ----------smGCCGCCr ; cor=0.676; Ncor=0.468; logoDP=6.103; NsEucl=0.870; NSW=0.849; rcor=100; rNcor=76; rlogoDP=4; rNsEucl=132; rNSW=123; rank_mean=87.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 18 30 0 0 0 0 0 0 36 c 0 0 0 0 0 0 0 0 0 0 37 50 0 100 100 0 100 100 7 g 0 0 0 0 0 0 0 0 0 0 27 10 100 0 0 100 0 0 50 t 0 0 0 0 0 0 0 0 0 0 18 10 0 0 0 0 0 0 7

CBF1.ampDAP_M0023_AthalianaCistrome_rc_shift7 (CBF1.ampDAP:M0023:AthalianaCistrome_rc) 0.622 0.498 3.758 0.895 0.868 134 39 158 25 86 88.400
; oligos_6-8nt_m4 versus CBF1.ampDAP_M0023_AthalianaCistrome_rc (CBF1.ampDAP:M0023:AthalianaCistrome_rc); m=73/241; ncol2=15; w=0; offset=0; strand=R; shift=7; score= 88.4; -------hytyyrCCGACA ; cor=0.622; Ncor=0.498; logoDP=3.758; NsEucl=0.895; NSW=0.868; rcor=134; rNcor=39; rlogoDP=158; rNsEucl=25; rNSW=86; rank_mean=88.400; match_rank= a 0 0 0 0 0 0 0 156 133 148 96 63 277 0 0 0 598 0 413 c 0 0 0 0 0 0 0 156 212 101 188 222 0 590 598 0 0 598 39 g 0 0 0 0 0 0 0 89 101 144 62 98 321 0 0 598 0 0 81 t 0 0 0 0 0 0 0 197 152 205 252 215 0 8 0 0 0 0 65

WIN1_MA1804.1_JASPAR_shift10 (WIN1:MA1804.1:JASPAR) 0.684 0.473 2.841 0.892 0.895 96 65 192 40 51 88.800
; oligos_6-8nt_m4 versus WIN1_MA1804.1_JASPAR (WIN1:MA1804.1:JASPAR); m=74/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 88.8; ----------sCrCCGcmr ; cor=0.684; Ncor=0.473; logoDP=2.841; NsEucl=0.892; NSW=0.895; rcor=96; rNcor=65; rlogoDP=192; rNsEucl=40; rNSW=51; rank_mean=88.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 249 137 384 1.03 1.12 202 164 348.47 253 c 0 0 0 0 0 0 0 0 0 0 390 720 0.68 795 956 9.19 679 352 163 g 0 0 0 0 0 0 0 0 0 0 267 133 615 187 0.69 712 79 155 426 t 0 0 0 0 0 0 0 0 0 0 94 9.58 0.58 17 43 77 78 145 158

RAP2.3_RAP2.3_2_ArabidopsisPBM_shift10 (RAP2.3:RAP2.3_2:ArabidopsisPBM) 0.670 0.464 5.322 0.875 0.860 109 84 44 112 98 89.400
; oligos_6-8nt_m4 versus RAP2.3_RAP2.3_2_ArabidopsisPBM (RAP2.3:RAP2.3_2:ArabidopsisPBM); m=75/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 89.4; ----------smGCCGCma ; cor=0.670; Ncor=0.464; logoDP=5.322; NsEucl=0.875; NSW=0.860; rcor=109; rNcor=84; rlogoDP=44; rNsEucl=112; rNSW=98; rank_mean=89.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 9 34 0 0 1 1 2 28 62 c 0 0 0 0 0 0 0 0 0 0 29 57 1 96 98 1 87 67 7 g 0 0 0 0 0 0 0 0 0 0 57 3 99 3 1 97 3 1 11 t 0 0 0 0 0 0 0 0 0 0 5 6 0 1 0 1 8 4 20

ERF021_MA1233.3_JASPAR_shift11 (ERF021:MA1233.3:JASPAR) 0.722 0.482 4.539 0.872 0.869 72 61 111 124 85 90.600
; oligos_6-8nt_m4 versus ERF021_MA1233.3_JASPAR (ERF021:MA1233.3:JASPAR); m=76/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 90.6; -----------CrCCGACA ; cor=0.722; Ncor=0.482; logoDP=4.539; NsEucl=0.872; NSW=0.869; rcor=72; rNcor=61; rlogoDP=111; rNsEucl=124; rNSW=85; rank_mean=90.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 186 889 38 19 56 2213 27 2867 c 0 0 0 0 0 0 0 0 0 0 0 2340 15 3024 3113 8 500 3048 54 g 0 0 0 0 0 0 0 0 0 0 0 102 2078 76 14 3076 104 44 158 t 0 0 0 0 0 0 0 0 0 0 0 531 177 21 13 19 342 40 80

WIN1_M0006_1.02_CISBP_shift10 (WIN1:M0006_1.02:CISBP) 0.682 0.472 2.860 0.892 0.894 99 67 191 43 53 90.600
; oligos_6-8nt_m4 versus WIN1_M0006_1.02_CISBP (WIN1:M0006_1.02:CISBP); m=77/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 90.6; ----------vCrCCGCmr ; cor=0.682; Ncor=0.472; logoDP=2.860; NsEucl=0.892; NSW=0.894; rcor=99; rNcor=67; rlogoDP=191; rNsEucl=43; rNSW=53; rank_mean=90.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 25 14 38 0 0 20 16 35 25 c 0 0 0 0 0 0 0 0 0 0 39 72 0 80 96 1 68 35 16 g 0 0 0 0 0 0 0 0 0 0 27 13 61 19 0 71 8 16 43 t 0 0 0 0 0 0 0 0 0 0 9 1 1 1 4 8 8 14 16

CBF3.DAP_M0053_AthalianaCistrome_shift8 (CBF3.DAP:M0053:AthalianaCistrome) 0.618 0.454 5.366 0.886 0.858 139 103 41 70 102 91.000
; oligos_6-8nt_m4 versus CBF3.DAP_M0053_AthalianaCistrome (CBF3.DAP:M0053:AthalianaCistrome); m=78/241; ncol2=14; w=0; offset=1; strand=D; shift=8; score= 91; --------ywyyrCCGACa ; cor=0.618; Ncor=0.454; logoDP=5.366; NsEucl=0.886; NSW=0.858; rcor=139; rNcor=103; rlogoDP=41; rNsEucl=70; rNSW=102; rank_mean=91.000; match_rank= a 0 0 0 0 0 0 0 0 148 152 75 69 310 0 0 0 597 0 344 c 0 0 0 0 0 0 0 0 211 96 193 266 0 585 597 0 0 597 59 g 0 0 0 0 0 0 0 0 61 143 69 90 284 0 0 597 0 0 110 t 0 0 0 0 0 0 0 0 177 206 260 172 3 12 0 0 0 0 84

ATCBF3_M0031_1.02_CISBP_rc_shift11 (ATCBF3:M0031_1.02:CISBP_rc) 0.776 0.443 0.321 0.892 0.907 30 126 236 38 26 91.200
; oligos_6-8nt_m4 versus ATCBF3_M0031_1.02_CISBP_rc (ATCBF3:M0031_1.02:CISBP_rc); m=79/241; ncol2=10; w=0; offset=4; strand=R; shift=11; score= 91.2; -----------yrCCGACa ; cor=0.776; Ncor=0.443; logoDP=0.321; NsEucl=0.892; NSW=0.907; rcor=30; rNcor=126; rlogoDP=236; rNsEucl=38; rNSW=26; rank_mean=91.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 15 44 2 4 3 96 1 52 c 0 0 0 0 0 0 0 0 0 0 0 27 1 89 89 0 0 96 14 g 0 0 0 0 0 0 0 0 0 0 0 21 53 0 0 96 1 0 21 t 0 0 0 0 0 0 0 0 0 0 0 37 2 9 7 1 3 3 13

ra2_UN0873.1_JASPAR_rc_shift11 (ra2:UN0873.1:JASPAR_rc) 0.796 0.464 4.827 0.860 0.862 19 83 83 179 94 91.600
; oligos_6-8nt_m4 versus ra2_UN0873.1_JASPAR_rc (ra2:UN0873.1:JASPAR_rc); m=80/241; ncol2=7; w=0; offset=4; strand=R; shift=11; score= 91.6; -----------GGCCGCG- ; cor=0.796; Ncor=0.464; logoDP=4.827; NsEucl=0.860; NSW=0.862; rcor=19; rNcor=83; rlogoDP=83; rNsEucl=179; rNSW=94; rank_mean=91.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 3743 3743 0 3743 0 0 g 0 0 0 0 0 0 0 0 0 0 0 3743 3743 0 0 3743 0 3743 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

DDF1.ampDAP_M0134_AthalianaCistrome_shift7 (DDF1.ampDAP:M0134:AthalianaCistrome) 0.565 0.521 4.506 0.890 0.856 180 24 112 45 106 93.400
; oligos_6-8nt_m4 versus DDF1.ampDAP_M0134_AthalianaCistrome (DDF1.ampDAP:M0134:AthalianaCistrome); m=81/241; ncol2=13; w=0; offset=0; strand=D; shift=7; score= 93.4; -------yckyyryCGACA ; cor=0.565; Ncor=0.521; logoDP=4.506; NsEucl=0.890; NSW=0.856; rcor=180; rNcor=24; rlogoDP=112; rNsEucl=45; rNSW=106; rank_mean=93.400; match_rank= a 0 0 0 0 0 0 0 40 58 63 35 52 96 1 0 0 261 0 198 c 0 0 0 0 0 0 0 76 95 33 86 76 1 155 264 2 1 262 10 g 0 0 0 0 0 0 0 26 62 70 38 61 160 1 0 262 1 2 26 t 0 0 0 0 0 0 0 122 49 98 105 75 7 107 0 0 1 0 30

DREB1A_MA0971.2_JASPAR_rc_shift12 (DREB1A:MA0971.2:JASPAR_rc) 0.821 0.442 0.372 0.886 0.909 7 129 234 75 23 93.600
; oligos_6-8nt_m4 versus DREB1A_MA0971.2_JASPAR_rc (DREB1A:MA0971.2:JASPAR_rc); m=82/241; ncol2=8; w=0; offset=5; strand=R; shift=12; score= 93.6; ------------rCCGACa ; cor=0.821; Ncor=0.442; logoDP=0.372; NsEucl=0.886; NSW=0.909; rcor=7; rNcor=129; rlogoDP=234; rNsEucl=75; rNSW=23; rank_mean=93.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 461 3 6 1 973 1 565 c 0 0 0 0 0 0 0 0 0 0 0 0 19 948 994 4 3 997 137 g 0 0 0 0 0 0 0 0 0 0 0 0 504 0 0 991 14 0 159 t 0 0 0 0 0 0 0 0 0 0 0 0 16 48 0 5 10 2 139

DEAR3_DEAR3_ArabidopsisPBM_shift10 (DEAR3:DEAR3:ArabidopsisPBM) 0.683 0.473 3.220 0.888 0.887 98 66 182 61 63 94.000
; oligos_6-8nt_m4 versus DEAR3_DEAR3_ArabidopsisPBM (DEAR3:DEAR3:ArabidopsisPBM); m=83/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 94; ----------kCrCCGmCs ; cor=0.683; Ncor=0.473; logoDP=3.220; NsEucl=0.888; NSW=0.887; rcor=98; rNcor=66; rlogoDP=182; rNsEucl=61; rNSW=63; rank_mean=94.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 20 15 33 3 4 7 32 7 10 c 0 0 0 0 0 0 0 0 0 0 23 79 1 89 93 4 52 83 42 g 0 0 0 0 0 0 0 0 0 0 32 2 64 6 2 86 6 7 33 t 0 0 0 0 0 0 0 0 0 0 25 4 2 2 1 3 10 3 15

CRF4_MA0976.1_JASPAR_shift10 (CRF4:MA0976.1:JASPAR) 0.691 0.461 5.723 0.864 0.853 90 94 17 157 112 94.000
; oligos_6-8nt_m4 versus CRF4_MA0976.1_JASPAR (CRF4:MA0976.1:JASPAR); m=84/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 94; ----------sCGCCGCC- ; cor=0.691; Ncor=0.461; logoDP=5.723; NsEucl=0.864; NSW=0.853; rcor=90; rNcor=94; rlogoDP=17; rNsEucl=157; rNSW=112; rank_mean=94.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 70 108 0 0 0 0 68 97 0 c 0 0 0 0 0 0 0 0 0 0 326 769 0 974 1000 13 756 790 0 g 0 0 0 0 0 0 0 0 0 0 535 62 1000 25 0 987 68 65 0 t 0 0 0 0 0 0 0 0 0 0 70 62 0 0 0 0 108 49 0

CRF4_M0033_1.02_CISBP_shift10 (CRF4:M0033_1.02:CISBP) 0.691 0.461 5.728 0.864 0.852 93 95 15 158 114 95.000
; oligos_6-8nt_m4 versus CRF4_M0033_1.02_CISBP (CRF4:M0033_1.02:CISBP); m=85/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 95; ----------sCGCCGCC- ; cor=0.691; Ncor=0.461; logoDP=5.728; NsEucl=0.864; NSW=0.852; rcor=93; rNcor=95; rlogoDP=15; rNsEucl=158; rNSW=114; rank_mean=95.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 7 10 0 c 0 0 0 0 0 0 0 0 0 0 33 77 0 97 100 1 76 79 0 g 0 0 0 0 0 0 0 0 0 0 53 6 100 3 0 99 6 6 0 t 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 11 5 0

RAP211.ampDAP_M0019_AthalianaCistrome_shift7 (RAP211.ampDAP:M0019:AthalianaCistrome) 0.579 0.463 5.304 0.889 0.851 172 85 46 57 116 95.200
; oligos_6-8nt_m4 versus RAP211.ampDAP_M0019_AthalianaCistrome (RAP211.ampDAP:M0019:AthalianaCistrome); m=86/241; ncol2=15; w=0; offset=0; strand=D; shift=7; score= 95.2; -------yyttsGCCGGCw ; cor=0.579; Ncor=0.463; logoDP=5.304; NsEucl=0.889; NSW=0.851; rcor=172; rNcor=85; rlogoDP=46; rNsEucl=57; rNSW=116; rank_mean=95.200; match_rank= a 0 0 0 0 0 0 0 118 105 130 111 26 0 91 0 0 0 1 149 c 0 0 0 0 0 0 0 158 178 138 140 158 0 485 587 0 1 568 105 g 0 0 0 0 0 0 0 62 90 90 69 340 586 7 0 587 586 0 142 t 0 0 0 0 0 0 0 249 214 229 267 63 1 4 0 0 0 18 191

AT5G23930_UN0357.2_JASPAR_shift11 (AT5G23930:UN0357.2:JASPAR) 0.701 0.467 6.111 0.859 0.842 83 78 3 182 132 95.600
; oligos_6-8nt_m4 versus AT5G23930_UN0357.2_JASPAR (AT5G23930:UN0357.2:JASPAR); m=87/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 95.6; -----------mGCCGCCr ; cor=0.701; Ncor=0.467; logoDP=6.111; NsEucl=0.859; NSW=0.842; rcor=83; rNcor=78; rlogoDP=3; rNsEucl=182; rNSW=132; rank_mean=95.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 535 0 0 0 0 0 0 600 c 0 0 0 0 0 0 0 0 0 0 0 1323 0 2074 2074 0 2074 2074 43 g 0 0 0 0 0 0 0 0 0 0 0 91 2074 0 0 2074 0 0 1135 t 0 0 0 0 0 0 0 0 0 0 0 125 0 0 0 0 0 0 296

RAP210_MA1249.1_JASPAR_rc_shift7 (RAP210:MA1249.1:JASPAR_rc) 0.615 0.492 3.547 0.893 0.861 146 49 160 35 97 97.400
; oligos_6-8nt_m4 versus RAP210_MA1249.1_JASPAR_rc (RAP210:MA1249.1:JASPAR_rc); m=88/241; ncol2=15; w=0; offset=0; strand=R; shift=7; score= 97.4; -------yykyyGCCGACA ; cor=0.615; Ncor=0.492; logoDP=3.547; NsEucl=0.893; NSW=0.861; rcor=146; rNcor=49; rlogoDP=160; rNsEucl=35; rNSW=97; rank_mean=97.400; match_rank= a 0 0 0 0 0 0 0 147 126 116 77 67 143 0 0 0 563 1 488 c 0 0 0 0 0 0 0 195 204 103 205 213 2 569 599 0 10 598 2 g 0 0 0 0 0 0 0 77 82 154 46 34 454 0 0 599 0 0 98 t 0 0 0 0 0 0 0 180 187 226 271 285 0 30 0 0 26 0 11

RAP2.3_RAP2.3_ArabidopsisPBM_shift9 (RAP2.3:RAP2.3:ArabidopsisPBM) 0.610 0.508 4.851 0.878 0.851 153 33 78 107 117 97.600
; oligos_6-8nt_m4 versus RAP2.3_RAP2.3_ArabidopsisPBM (RAP2.3:RAP2.3:ArabidopsisPBM); m=89/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 97.6; ---------rgCGCCGCmw ; cor=0.610; Ncor=0.508; logoDP=4.851; NsEucl=0.878; NSW=0.851; rcor=153; rNcor=33; rlogoDP=78; rNsEucl=107; rNSW=117; rank_mean=97.600; match_rank= a 0 0 0 0 0 0 0 0 0 25 12 15 1 1 2 1 11 26 49 c 0 0 0 0 0 0 0 0 0 13 23 76 1 75 98 0 78 66 9 g 0 0 0 0 0 0 0 0 0 47 54 3 98 24 0 98 3 1 17 t 0 0 0 0 0 0 0 0 0 15 11 6 0 0 0 1 8 7 25

ERF1B_MA0567.1_JASPAR_shift11 (ERF1B:MA0567.1:JASPAR) 0.698 0.465 5.256 0.864 0.852 86 81 51 160 115 98.600
; oligos_6-8nt_m4 versus ERF1B_MA0567.1_JASPAR (ERF1B:MA0567.1:JASPAR); m=90/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 98.6; -----------mGCCGCCa ; cor=0.698; Ncor=0.465; logoDP=5.256; NsEucl=0.864; NSW=0.852; rcor=86; rNcor=81; rlogoDP=51; rNsEucl=160; rNSW=115; rank_mean=98.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 42 1 0 4 2 2 1 58 c 0 0 0 0 0 0 0 0 0 0 0 54 1 98 96 0 92 98 5 g 0 0 0 0 0 0 0 0 0 0 0 3 98 1 0 97 2 1 24 t 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 1 4 1 12

ERF15_MA1231.3_JASPAR_shift11 (ERF15:MA1231.3:JASPAR) 0.695 0.463 5.403 0.863 0.850 88 86 35 164 120 98.600
; oligos_6-8nt_m4 versus ERF15_MA1231.3_JASPAR (ERF15:MA1231.3:JASPAR); m=91/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 98.6; -----------mGCCGCCd ; cor=0.695; Ncor=0.463; logoDP=5.403; NsEucl=0.863; NSW=0.850; rcor=88; rNcor=86; rlogoDP=35; rNsEucl=164; rNSW=120; rank_mean=98.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1010 30 3 59 51 14 10 579 c 0 0 0 0 0 0 0 0 0 0 0 942 7 2124 2062 3 2066 2107 62 g 0 0 0 0 0 0 0 0 0 0 0 94 2078 1 3 2067 14 8 911 t 0 0 0 0 0 0 0 0 0 0 0 87 18 5 9 12 39 8 581

DREB1D_MA1218.2_JASPAR_rc_shift12 (DREB1D:MA1218.2:JASPAR_rc) 0.816 0.439 0.459 0.881 0.900 8 135 226 90 39 99.600
; oligos_6-8nt_m4 versus DREB1D_MA1218.2_JASPAR_rc (DREB1D:MA1218.2:JASPAR_rc); m=92/241; ncol2=8; w=0; offset=5; strand=R; shift=12; score= 99.6; ------------rCCGACa ; cor=0.816; Ncor=0.439; logoDP=0.459; NsEucl=0.881; NSW=0.900; rcor=8; rNcor=135; rlogoDP=226; rNsEucl=90; rNSW=39; rank_mean=99.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 286 0 0 0 597 0 402 c 0 0 0 0 0 0 0 0 0 0 0 0 0 576 597 0 0 597 52 g 0 0 0 0 0 0 0 0 0 0 0 0 311 0 0 597 0 0 109 t 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 34

CBF1_MA1224.1_JASPAR_shift9 (CBF1:MA1224.1:JASPAR) 0.632 0.451 5.477 0.877 0.848 126 110 28 111 125 100.000
; oligos_6-8nt_m4 versus CBF1_MA1224.1_JASPAR (CBF1:MA1224.1:JASPAR); m=93/241; ncol2=12; w=0; offset=2; strand=D; shift=9; score= 100; ---------kyyrCCGACa ; cor=0.632; Ncor=0.451; logoDP=5.477; NsEucl=0.877; NSW=0.848; rcor=126; rNcor=110; rlogoDP=28; rNsEucl=111; rNSW=125; rank_mean=100.000; match_rank= a 0 0 0 0 0 0 0 0 0 148 79 71 261 0 0 0 596 0 385 c 0 0 0 0 0 0 0 0 0 64 192 288 0 596 600 0 0 600 38 g 0 0 0 0 0 0 0 0 0 177 68 86 337 0 0 600 0 0 115 t 0 0 0 0 0 0 0 0 0 211 261 155 2 4 0 0 4 0 62

DDF1_DDF1_ArabidopsisPBM_rc_shift11 (DDF1:DDF1:ArabidopsisPBM_rc) 0.784 0.448 0.455 0.883 0.890 26 118 227 84 58 102.600
; oligos_6-8nt_m4 versus DDF1_DDF1_ArabidopsisPBM_rc (DDF1:DDF1:ArabidopsisPBM_rc); m=94/241; ncol2=10; w=0; offset=4; strand=R; shift=11; score= 102.6; -----------bGCCGACA ; cor=0.784; Ncor=0.448; logoDP=0.455; NsEucl=0.883; NSW=0.890; rcor=26; rNcor=118; rlogoDP=227; rNsEucl=84; rNSW=58; rank_mean=102.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 12 21 0 0 0 99 0 97 c 0 0 0 0 0 0 0 0 0 0 0 29 0 83 100 0 0 99 0 g 0 0 0 0 0 0 0 0 0 0 0 31 79 0 0 99 1 0 2 t 0 0 0 0 0 0 0 0 0 0 0 28 0 17 0 1 0 1 1

ARF7_MA1698.1_JASPAR_shift9 (ARF7:MA1698.1:JASPAR) 0.688 0.430 4.250 0.889 0.878 95 157 131 53 77 102.600
; oligos_6-8nt_m4 versus ARF7_MA1698.1_JASPAR (ARF7:MA1698.1:JASPAR); m=95/241; ncol2=14; w=0; offset=2; strand=D; shift=9; score= 102.6; ---------acwGCCGACr ; cor=0.688; Ncor=0.430; logoDP=4.250; NsEucl=0.889; NSW=0.878; rcor=95; rNcor=157; rlogoDP=131; rNsEucl=53; rNSW=77; rank_mean=102.600; match_rank= a 0 0 0 0 0 0 0 0 0 1740 775 1321 251 113 141 83 3801 18 2657 c 0 0 0 0 0 0 0 0 0 1003 1727 502 317 3717 3801 120 46 3917 173 g 0 0 0 0 0 0 0 0 0 752 745 463 3325 135 64 3799 176 76 1196 t 0 0 0 0 0 0 0 0 0 570 818 1779 172 100 59 63 42 54 39

AT4G00238_M1619_1.02_CISBP_rc_shift10 (AT4G00238:M1619_1.02:CISBP_rc) 0.702 0.486 0.355 0.886 0.882 82 54 235 74 70 103.000
; oligos_6-8nt_m4 versus AT4G00238_M1619_1.02_CISBP_rc (AT4G00238:M1619_1.02:CISBP_rc); m=96/241; ncol2=10; w=0; offset=3; strand=R; shift=10; score= 103; ----------kkgccggcm ; cor=0.702; Ncor=0.486; logoDP=0.355; NsEucl=0.886; NSW=0.882; rcor=82; rNcor=54; rlogoDP=235; rNsEucl=74; rNSW=70; rank_mean=103.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 22 17 22 15 15 11 21 22 27 c 0 0 0 0 0 0 0 0 0 0 24 18 20 47 54 19 17 36 38 g 0 0 0 0 0 0 0 0 0 0 27 38 36 17 19 55 47 20 18 t 0 0 0 0 0 0 0 0 0 0 27 27 22 21 12 15 15 22 17

RAP2-3_MA1051.1_JASPAR_shift10 (RAP2-3:MA1051.1:JASPAR) 0.684 0.456 4.754 0.868 0.862 97 99 87 138 95 103.200
; oligos_6-8nt_m4 versus RAP2-3_MA1051.1_JASPAR (RAP2-3:MA1051.1:JASPAR); m=97/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 103.2; ----------gCGCCGCm- ; cor=0.684; Ncor=0.456; logoDP=4.754; NsEucl=0.868; NSW=0.862; rcor=97; rNcor=99; rlogoDP=87; rNsEucl=138; rNSW=95; rank_mean=103.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 119 147 7 6 16 6 109 257 0 c 0 0 0 0 0 0 0 0 0 0 232 761 6 746 977 3 780 664 0 g 0 0 0 0 0 0 0 0 0 0 543 33 982 244 4 976 26 6 0 t 0 0 0 0 0 0 0 0 0 0 107 58 5 4 3 15 85 73 0

DDF1.DAP_M0083_AthalianaCistrome_rc_shift7 (DDF1.DAP:M0083:AthalianaCistrome_rc) 0.611 0.489 2.770 0.894 0.865 152 51 195 31 90 103.800
; oligos_6-8nt_m4 versus DDF1.DAP_M0083_AthalianaCistrome_rc (DDF1.DAP:M0083:AthalianaCistrome_rc); m=98/241; ncol2=15; w=0; offset=0; strand=R; shift=7; score= 103.8; -------yykyyGYCGACA ; cor=0.611; Ncor=0.489; logoDP=2.770; NsEucl=0.894; NSW=0.865; rcor=152; rNcor=51; rlogoDP=195; rNsEucl=31; rNSW=90; rank_mean=103.800; match_rank= a 0 0 0 0 0 0 0 135 128 136 89 74 145 0 0 0 599 0 481 c 0 0 0 0 0 0 0 184 248 119 175 236 0 424 600 0 0 600 20 g 0 0 0 0 0 0 0 90 71 177 71 68 455 1 0 600 0 0 68 t 0 0 0 0 0 0 0 191 153 168 265 222 0 175 0 0 1 0 31

ARF7_EEAD0025_EEADannot_rc_shift13 (ARF7:EEAD0025:EEADannot_rc) 0.821 0.410 0.382 0.886 0.922 6 208 233 73 11 106.200
; oligos_6-8nt_m4 versus ARF7_EEAD0025_EEADannot_rc (ARF7:EEAD0025:EEADannot_rc); m=99/241; ncol2=6; w=0; offset=6; strand=R; shift=13; score= 106.2; -------------CCGACr ; cor=0.821; Ncor=0.410; logoDP=0.382; NsEucl=0.886; NSW=0.922; rcor=6; rNcor=208; rlogoDP=233; rNsEucl=73; rNSW=11; rank_mean=106.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 288 400 228 3054 50 2335 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2870 2944 48 56 3429 242 g 0 0 0 0 0 0 0 0 0 0 0 0 0 232 167 3249 434 78 955 t 0 0 0 0 0 0 0 0 0 0 0 0 0 195 74 60 42 28 53

ERF6_MA1006.1_JASPAR_shift10 (ERF6:MA1006.1:JASPAR) 0.646 0.447 5.879 0.867 0.840 117 120 14 146 135 106.400
; oligos_6-8nt_m4 versus ERF6_MA1006.1_JASPAR (ERF6:MA1006.1:JASPAR); m=100/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 106.4; ----------mtGCCGGCg ; cor=0.646; Ncor=0.447; logoDP=5.879; NsEucl=0.867; NSW=0.840; rcor=117; rNcor=120; rlogoDP=14; rNsEucl=146; rNSW=135; rank_mean=106.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 291 78 0 0 0 0 0 0 159 c 0 0 0 0 0 0 0 0 0 0 352 221 0 1000 1000 0 88 1000 156 g 0 0 0 0 0 0 0 0 0 0 179 166 1000 0 0 1000 912 0 530 t 0 0 0 0 0 0 0 0 0 0 179 535 0 0 0 0 0 0 155

DREB1B_MA1669.1_JASPAR_shift9 (DREB1B:MA1669.1:JASPAR) 0.669 0.418 5.028 0.884 0.865 110 185 64 82 92 106.600
; oligos_6-8nt_m4 versus DREB1B_MA1669.1_JASPAR (DREB1B:MA1669.1:JASPAR); m=101/241; ncol2=14; w=0; offset=2; strand=D; shift=9; score= 106.6; ---------wyyRCCGACA ; cor=0.669; Ncor=0.418; logoDP=5.028; NsEucl=0.884; NSW=0.865; rcor=110; rNcor=185; rlogoDP=64; rNsEucl=82; rNSW=92; rank_mean=106.600; match_rank= a 0 0 0 0 0 0 0 0 0 718 527 417 756 15 13 8 2607 10 2232 c 0 0 0 0 0 0 0 0 0 486 726 789 33 2617 2711 14 44 2697 108 g 0 0 0 0 0 0 0 0 0 667 396 445 1879 21 4 2708 34 12 235 t 0 0 0 0 0 0 0 0 0 865 1087 1085 68 83 8 6 51 17 161

ATERF6_M0027_1.02_CISBP_shift10 (ATERF6:M0027_1.02:CISBP) 0.646 0.447 5.880 0.866 0.839 119 123 13 147 136 107.600
; oligos_6-8nt_m4 versus ATERF6_M0027_1.02_CISBP (ATERF6:M0027_1.02:CISBP); m=102/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 107.6; ----------mtGCCGGCg ; cor=0.646; Ncor=0.447; logoDP=5.880; NsEucl=0.866; NSW=0.839; rcor=119; rNcor=123; rlogoDP=13; rNsEucl=147; rNSW=136; rank_mean=107.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 29 8 0 0 0 0 0 0 16 c 0 0 0 0 0 0 0 0 0 0 35 22 0 100 100 0 9 100 16 g 0 0 0 0 0 0 0 0 0 0 18 16 100 0 0 100 91 0 53 t 0 0 0 0 0 0 0 0 0 0 18 54 0 0 0 0 0 0 15

AT4G00390_UN0392.1_JASPAR_shift7 (AT4G00390:UN0392.1:JASPAR) 0.557 0.557 3.222 0.890 0.854 186 11 181 52 110 108.000
; oligos_6-8nt_m4 versus AT4G00390_UN0392.1_JASPAR (AT4G00390:UN0392.1:JASPAR); m=103/241; ncol2=12; w=0; offset=0; strand=D; shift=7; score= 108; -------raCCGGTCrrcc ; cor=0.557; Ncor=0.557; logoDP=3.222; NsEucl=0.890; NSW=0.854; rcor=186; rNcor=11; rlogoDP=181; rNsEucl=52; rNSW=110; rank_mean=108.000; match_rank= a 0 0 0 0 0 0 0 285 679 25 25 0.13 0.13 0.13 0.13 254 376.95 225 225 c 0 0 0 0 0 0 0 191 75 924 924 0.13 86 99 914 149 175 326 326 g 0 0 0 0 0 0 0 332 171 25 25 1000 914 86 86 453 273 225 225 t 0 0 0 0 0 0 0 191 75 25 25 0.13 0.13 815 0.13 144.43 175 225 225

ASR1_MA1812.2_JASPAR_shift10 (ASR1:MA1812.2:JASPAR) 0.663 0.497 4.713 0.865 0.837 112 43 92 152 144 108.600
; oligos_6-8nt_m4 versus ASR1_MA1812.2_JASPAR (ASR1:MA1812.2:JASPAR); m=104/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 108.6; ----------AGGCCCAAw ; cor=0.663; Ncor=0.497; logoDP=4.713; NsEucl=0.865; NSW=0.837; rcor=112; rNcor=43; rlogoDP=92; rNsEucl=152; rNSW=144; rank_mean=108.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 124 20 1 0 0 0 149 111 41 c 0 0 0 0 0 0 0 0 0 0 10 1 0 153 156 155 1 6 14 g 0 0 0 0 0 0 0 0 0 0 5 135 155 0 0 0 6 7 7 t 0 0 0 0 0 0 0 0 0 0 17 0 0 3 0 1 0 32 94

RAP2.4_M0016_1.02_CISBP_shift11 (RAP2.4:M0016_1.02:CISBP) 0.723 0.413 3.285 0.887 0.898 69 198 172 65 43 109.400
; oligos_6-8nt_m4 versus RAP2.4_M0016_1.02_CISBP (RAP2.4:M0016_1.02:CISBP); m=105/241; ncol2=10; w=0; offset=4; strand=D; shift=11; score= 109.4; -----------crCCGaCm ; cor=0.723; Ncor=0.413; logoDP=3.285; NsEucl=0.887; NSW=0.898; rcor=69; rNcor=198; rlogoDP=172; rNsEucl=65; rNSW=43; rank_mean=109.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 18 58 0 0 9 50 10 27 c 0 0 0 0 0 0 0 0 0 0 0 55 0 93 97 1 24 82 55 g 0 0 0 0 0 0 0 0 0 0 0 13 42 7 0 79 8 0 5 t 0 0 0 0 0 0 0 0 0 0 0 14 0 0 3 11 18 8 13

DREB1E_MA0978.1_JASPAR_rc_shift12 (DREB1E:MA0978.1:JASPAR_rc) 0.813 0.438 0.440 0.875 0.890 10 139 228 115 57 109.800
; oligos_6-8nt_m4 versus DREB1E_MA0978.1_JASPAR_rc (DREB1E:MA0978.1:JASPAR_rc); m=106/241; ncol2=8; w=0; offset=5; strand=R; shift=12; score= 109.8; ------------GCCGACA ; cor=0.813; Ncor=0.438; logoDP=0.440; NsEucl=0.875; NSW=0.890; rcor=10; rNcor=139; rlogoDP=228; rNsEucl=115; rNSW=57; rank_mean=109.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 208 2 4 4 992 3 973 c 0 0 0 0 0 0 0 0 0 0 0 0 1 828 992 1 2 991 3 g 0 0 0 0 0 0 0 0 0 0 0 0 790 0 2 992 3 1 15 t 0 0 0 0 0 0 0 0 0 0 0 0 1 169 2 3 3 6 9

Rap210.ampDAP_M0054_AthalianaCistrome_rc_shift7 (Rap210.ampDAP:M0054:AthalianaCistrome_rc) 0.611 0.524 0.309 0.892 0.860 151 21 237 42 100 110.200
; oligos_6-8nt_m4 versus Rap210.ampDAP_M0054_AthalianaCistrome_rc (Rap210.ampDAP:M0054:AthalianaCistrome_rc); m=107/241; ncol2=14; w=0; offset=0; strand=R; shift=7; score= 110.2; -------yytyyrCCGACA ; cor=0.611; Ncor=0.524; logoDP=0.309; NsEucl=0.892; NSW=0.860; rcor=151; rNcor=21; rlogoDP=237; rNsEucl=42; rNSW=100; rank_mean=110.200; match_rank= a 0 0 0 0 0 0 0 138 147 111 80 84 192 0 0 0 595 0 517 c 0 0 0 0 0 0 0 157 156 85 215 152 0 551 596 0 1 596 3 g 0 0 0 0 0 0 0 87 113 145 44 88 404 0 0 596 0 0 63 t 0 0 0 0 0 0 0 214 180 255 257 272 0 45 0 0 0 0 13

ERF027_MA1227.2_JASPAR_shift8 (ERF027:MA1227.2:JASPAR) 0.622 0.428 4.817 0.886 0.858 135 165 84 71 103 111.600
; oligos_6-8nt_m4 versus ERF027_MA1227.2_JASPAR (ERF027:MA1227.2:JASPAR); m=108/241; ncol2=15; w=0; offset=1; strand=D; shift=8; score= 111.6; --------hwtyrCCGACA ; cor=0.622; Ncor=0.428; logoDP=4.817; NsEucl=0.886; NSW=0.858; rcor=135; rNcor=165; rlogoDP=84; rNsEucl=71; rNSW=103; rank_mean=111.600; match_rank= a 0 0 0 0 0 0 0 0 2281 2124 1537 1018 2993 59 49 38 7473 27 7176 c 0 0 0 0 0 0 0 0 2065 1440 1971 2217 257 7829 8069 30 249 8089 100 g 0 0 0 0 0 0 0 0 1253 1886 999 799 4656 39 15 8067 83 22 562 t 0 0 0 0 0 0 0 0 2566 2715 3658 4131 259 238 32 30 360 27 327

RAP2-4_MA1795.1_JASPAR_shift11 (RAP2-4:MA1795.1:JASPAR) 0.721 0.412 3.272 0.886 0.897 73 202 174 67 45 112.200
; oligos_6-8nt_m4 versus RAP2-4_MA1795.1_JASPAR (RAP2-4:MA1795.1:JASPAR); m=109/241; ncol2=10; w=0; offset=4; strand=D; shift=11; score= 112.2; -----------crCCGaCm ; cor=0.721; Ncor=0.412; logoDP=3.272; NsEucl=0.886; NSW=0.897; rcor=73; rNcor=202; rlogoDP=174; rNsEucl=67; rNSW=45; rank_mean=112.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 181 584 0.97 1.17 93 497 99 271 c 0 0 0 0 0 0 0 0 0 0 0 554 0.18 933 968 6.81 242 822.47 550 g 0 0 0 0 0 0 0 0 0 0 0 129 416 65 0.09 787 80 0.37 52 t 0 0 0 0 0 0 0 0 0 0 0 136.61 0 0.4355 31 113 181 78 127

CRF2_MA0975.1_JASPAR_shift10 (CRF2:MA0975.1:JASPAR) 0.671 0.448 5.943 0.858 0.838 105 119 11 186 140 112.200
; oligos_6-8nt_m4 versus CRF2_MA0975.1_JASPAR (CRF2:MA0975.1:JASPAR); m=110/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 112.2; ----------sCGCCGCC- ; cor=0.671; Ncor=0.448; logoDP=5.943; NsEucl=0.858; NSW=0.838; rcor=105; rNcor=119; rlogoDP=11; rNsEucl=186; rNSW=140; rank_mean=112.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 44 108 0 0 0 0 23 118 0 c 0 0 0 0 0 0 0 0 0 0 478 783 0 977 999 0 931 735 0 g 0 0 0 0 0 0 0 0 0 0 348 81 999 23 0 999 0 59 0 t 0 0 0 0 0 0 0 0 0 0 131 27 0 0 0 0 46 88 0

ERF021_MA1233.2_JASPAR_shift7 (ERF021:MA1233.2:JASPAR) 0.570 0.456 4.569 0.888 0.849 177 98 108 59 121 112.600
; oligos_6-8nt_m4 versus ERF021_MA1233.2_JASPAR (ERF021:MA1233.2:JASPAR); m=111/241; ncol2=15; w=0; offset=0; strand=D; shift=7; score= 112.6; -------ycgcCrCCGACA ; cor=0.570; Ncor=0.456; logoDP=4.569; NsEucl=0.888; NSW=0.849; rcor=177; rNcor=98; rlogoDP=108; rNsEucl=59; rNSW=121; rank_mean=112.600; match_rank= a 0 0 0 0 0 0 0 723 777 756 424 186 889 38 19 56 2213 27 2867 c 0 0 0 0 0 0 0 1062 1231 363 1691 2340 15 3024 3113 8 500 3048 54 g 0 0 0 0 0 0 0 509 362 1265 388 102 2078 76 14 3076 104 44 158 t 0 0 0 0 0 0 0 865 789 775 656 531 177 21 13 19 342 40 80

CRF2_M0029_1.02_CISBP_shift10 (CRF2:M0029_1.02:CISBP) 0.671 0.447 5.954 0.857 0.837 107 121 10 189 141 113.600
; oligos_6-8nt_m4 versus CRF2_M0029_1.02_CISBP (CRF2:M0029_1.02:CISBP); m=112/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 113.6; ----------sCGCCGCC- ; cor=0.671; Ncor=0.447; logoDP=5.954; NsEucl=0.857; NSW=0.837; rcor=107; rNcor=121; rlogoDP=10; rNsEucl=189; rNSW=141; rank_mean=113.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 2 12 0 c 0 0 0 0 0 0 0 0 0 0 48 78 0 98 100 0 93 73 0 g 0 0 0 0 0 0 0 0 0 0 35 8 100 2 0 100 0 6 0 t 0 0 0 0 0 0 0 0 0 0 13 3 0 0 0 0 5 9 0

ERF094_MA1049.2_JASPAR_shift11 (ERF094:MA1049.2:JASPAR) 0.732 0.427 5.380 0.856 0.854 57 167 40 198 108 114.000
; oligos_6-8nt_m4 versus ERF094_MA1049.2_JASPAR (ERF094:MA1049.2:JASPAR); m=113/241; ncol2=7; w=0; offset=4; strand=D; shift=11; score= 114; -----------mGCCGCC- ; cor=0.732; Ncor=0.427; logoDP=5.380; NsEucl=0.856; NSW=0.854; rcor=57; rNcor=167; rlogoDP=40; rNsEucl=198; rNSW=108; rank_mean=114.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 346 0 0 122 25 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 461 0 999 877 0 951 999 0 g 0 0 0 0 0 0 0 0 0 0 0 192 999 0 0 975 49 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

ERF018_MA1048.1_JASPAR_shift12 (ERF018:MA1048.1:JASPAR) 0.757 0.408 4.856 0.865 0.872 45 217 76 156 81 115.000
; oligos_6-8nt_m4 versus ERF018_MA1048.1_JASPAR (ERF018:MA1048.1:JASPAR); m=114/241; ncol2=8; w=0; offset=5; strand=D; shift=12; score= 115; ------------rCCGACC ; cor=0.757; Ncor=0.408; logoDP=4.856; NsEucl=0.865; NSW=0.872; rcor=45; rNcor=217; rlogoDP=76; rNsEucl=156; rNSW=81; rank_mean=115.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 581 1 6 2 718 3 44 c 0 0 0 0 0 0 0 0 0 0 0 0 1 993 990 2 8 991 943 g 0 0 0 0 0 0 0 0 0 0 0 0 412 2 2 993 65 1 1 t 0 0 0 0 0 0 0 0 0 0 0 0 6 4 1 2 208 5 12

JUB1_MA2017.1_JASPAR_rc_shift6 (JUB1:MA2017.1:JASPAR_rc) 0.576 0.493 2.620 0.890 0.856 174 47 202 46 107 115.200
; oligos_6-8nt_m4 versus JUB1_MA2017.1_JASPAR_rc (JUB1:MA2017.1:JASPAR_rc); m=115/241; ncol2=14; w=-1; offset=-1; strand=R; shift=6; score= 115.2; ------whactCGCCGTgr ; cor=0.576; Ncor=0.493; logoDP=2.620; NsEucl=0.890; NSW=0.856; rcor=174; rNcor=47; rlogoDP=202; rNsEucl=46; rNSW=107; rank_mean=115.200; match_rank= a 0 0 0 0 0 0 161 137 274 123 103 9 21 2 3 8 11 62 178 c 0 0 0 0 0 0 98 139 121 196 82 457 0 492 489 0 10 115 65 g 0 0 0 0 0 0 102 91 47 122 36 10 476 12 8 492 30 236 153 t 0 0 0 0 0 0 148 142 67 68 288 33 12 3 9 9 458 96 113

ERF105_MA1000.1_JASPAR_shift11 (ERF105:MA1000.1:JASPAR) 0.673 0.449 5.490 0.857 0.837 102 115 27 191 142 115.400
; oligos_6-8nt_m4 versus ERF105_MA1000.1_JASPAR (ERF105:MA1000.1:JASPAR); m=116/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 115.4; -----------kGCCGGCG ; cor=0.673; Ncor=0.449; logoDP=5.490; NsEucl=0.857; NSW=0.837; rcor=102; rNcor=115; rlogoDP=27; rNsEucl=191; rNSW=142; rank_mean=115.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 101 c 0 0 0 0 0 0 0 0 0 0 0 126 1 998 927 1 143 998 101 g 0 0 0 0 0 0 0 0 0 0 0 250 998 1 72 998 855 1 698 t 0 0 0 0 0 0 0 0 0 0 0 623 1 1 1 1 1 1 101

ERF15_MA1231.2_JASPAR_shift7 (ERF15:MA1231.2:JASPAR) 0.529 0.453 5.436 0.880 0.828 199 104 32 91 151 115.400
; oligos_6-8nt_m4 versus ERF15_MA1231.2_JASPAR (ERF15:MA1231.2:JASPAR); m=117/241; ncol2=14; w=0; offset=0; strand=D; shift=7; score= 115.4; -------yytymGCCGCCd ; cor=0.529; Ncor=0.453; logoDP=5.436; NsEucl=0.880; NSW=0.828; rcor=199; rNcor=104; rlogoDP=32; rNsEucl=91; rNSW=151; rank_mean=115.400; match_rank= a 0 0 0 0 0 0 0 404 487 442 206 1010 30 3 59 51 14 10 579 c 0 0 0 0 0 0 0 837 841 248 731 942 7 2124 2062 3 2066 2107 62 g 0 0 0 0 0 0 0 296 178 375 280 94 2078 1 3 2067 14 8 911 t 0 0 0 0 0 0 0 596 627 1068 916 87 18 5 9 12 39 8 581

AT5G51190_M0040_1.02_CISBP_shift11 (AT5G51190:M0040_1.02:CISBP) 0.673 0.449 5.602 0.857 0.836 103 116 22 194 146 116.200
; oligos_6-8nt_m4 versus AT5G51190_M0040_1.02_CISBP (AT5G51190:M0040_1.02:CISBP); m=118/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 116.2; -----------kGCCGGCG ; cor=0.673; Ncor=0.449; logoDP=5.602; NsEucl=0.857; NSW=0.836; rcor=103; rNcor=116; rlogoDP=22; rNsEucl=194; rNSW=146; rank_mean=116.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 c 0 0 0 0 0 0 0 0 0 0 0 13 0 100 93 0 14 100 10 g 0 0 0 0 0 0 0 0 0 0 0 25 100 0 7 100 86 0 70 t 0 0 0 0 0 0 0 0 0 0 0 62 0 0 0 0 0 0 10

ERF039_MA0995.2_JASPAR_shift10 (ERF039:MA0995.2:JASPAR) 0.671 0.431 4.640 0.874 0.858 108 153 102 118 101 116.400
; oligos_6-8nt_m4 versus ERF039_MA0995.2_JASPAR (ERF039:MA0995.2:JASPAR); m=119/241; ncol2=11; w=0; offset=3; strand=D; shift=10; score= 116.4; ----------ycrCCGACA ; cor=0.671; Ncor=0.431; logoDP=4.640; NsEucl=0.874; NSW=0.858; rcor=108; rNcor=153; rlogoDP=102; rNsEucl=118; rNSW=101; rank_mean=116.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 282 285 679 3 11 19 1381 1 1521 c 0 0 0 0 0 0 0 0 0 0 574 875 23 1617 1605 13 137 1615 21 g 0 0 0 0 0 0 0 0 0 0 258 168 864 23 10 1605 45 15 72 t 0 0 0 0 0 0 0 0 0 0 530 316 78 1 18 7 81 13 30

AT5G23930_UN0357.1_JASPAR_shift10 (AT5G23930:UN0357.1:JASPAR) 0.636 0.441 6.124 0.861 0.825 122 132 2 173 154 116.600
; oligos_6-8nt_m4 versus AT5G23930_UN0357.1_JASPAR (AT5G23930:UN0357.1:JASPAR); m=120/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 116.6; ----------ymGCCGCCr ; cor=0.636; Ncor=0.441; logoDP=6.124; NsEucl=0.861; NSW=0.825; rcor=122; rNcor=132; rlogoDP=2; rNsEucl=173; rNSW=154; rank_mean=116.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 228 535 0 0 0 0 0 0 600 c 0 0 0 0 0 0 0 0 0 0 1033 1323 0 2074 2074 0 2074 2074 43 g 0 0 0 0 0 0 0 0 0 0 293 91 2074 0 0 2074 0 0 1135 t 0 0 0 0 0 0 0 0 0 0 520 125 0 0 0 0 0 0 296

EREB201_ZmCRF3_B73_1_m1_EEAD0339_EEADannot_shift4 (EREB201_ZmCRF3_B73_1_m1:EEAD0339:EEADannot) 0.589 0.471 4.319 0.884 0.839 166 70 128 81 139 116.800
; oligos_6-8nt_m4 versus EREB201_ZmCRF3_B73_1_m1_EEAD0339_EEADannot (EREB201_ZmCRF3_B73_1_m1:EEAD0339:EEADannot); m=121/241; ncol2=15; w=-3; offset=-3; strand=D; shift=4; score= 116.8; ----ssCGGCCGGCmGsss ; cor=0.589; Ncor=0.471; logoDP=4.319; NsEucl=0.884; NSW=0.839; rcor=166; rNcor=70; rlogoDP=128; rNsEucl=81; rNSW=139; rank_mean=116.800; match_rank= a 0 0 0 0 6 10 14 9 0 7 0 1 0 0 28 19 7 12 18 c 0 0 0 0 28 53 72 7 0 89 100 0 0 100 48 9 37 39 40 g 0 0 0 0 61 29 3 83 100 4 0 96 100 0 23 71 43 35 34 t 0 0 0 0 5 8 11 1 0 0 0 3 0 0 1 1 13 14 8

AT3G11100_UN0353.1_JASPAR_rc_shift7 (AT3G11100:UN0353.1:JASPAR_rc) 0.549 0.549 2.569 0.888 0.849 188 12 204 60 122 117.200
; oligos_6-8nt_m4 versus AT3G11100_UN0353.1_JASPAR_rc (AT3G11100:UN0353.1:JASPAR_rc); m=122/241; ncol2=12; w=0; offset=0; strand=R; shift=7; score= 117.2; -------yysTCGCCGkcr ; cor=0.549; Ncor=0.549; logoDP=2.569; NsEucl=0.888; NSW=0.849; rcor=188; rNcor=12; rlogoDP=204; rNsEucl=60; rNSW=122; rank_mean=117.200; match_rank= a 0 0 0 0 0 0 0 592 572 602 113 57 84 19 14 61 158 549 696 c 0 0 0 0 0 0 0 698 875 886 198 2311 12 2394 2445 6 254 1002 300 g 0 0 0 0 0 0 0 396 289 653 58 55 2298 26 13 2413 652 330 1021 t 0 0 0 0 0 0 0 810 760 355 2127 73 102 57 24 16 1432 615 479

Auxin_6ycq_A_3D-footprint_rc_shift12 (Auxin:6ycq_A:3D-footprint_rc) 0.783 0.422 0.466 0.875 0.891 28 177 225 113 56 119.800
; oligos_6-8nt_m4 versus Auxin_6ycq_A_3D-footprint_rc (Auxin:6ycq_A:3D-footprint_rc); m=123/241; ncol2=8; w=0; offset=5; strand=R; shift=12; score= 119.8; ------------GcCGaCA ; cor=0.783; Ncor=0.422; logoDP=0.466; NsEucl=0.875; NSW=0.891; rcor=28; rNcor=177; rlogoDP=225; rNsEucl=113; rNSW=56; rank_mean=119.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 60 0 96 c 0 0 0 0 0 0 0 0 0 0 0 0 12 60 96 0 12 96 0 g 0 0 0 0 0 0 0 0 0 0 0 0 84 12 0 96 12 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 12 0 0

DEAR3_MA1376.2_JASPAR_shift11 (DEAR3:MA1376.2:JASPAR) 0.728 0.425 3.238 0.871 0.883 59 172 178 128 68 121.000
; oligos_6-8nt_m4 versus DEAR3_MA1376.2_JASPAR (DEAR3:MA1376.2:JASPAR); m=124/241; ncol2=7; w=0; offset=4; strand=D; shift=11; score= 121; -----------CrCCGmC- ; cor=0.728; Ncor=0.425; logoDP=3.238; NsEucl=0.871; NSW=0.883; rcor=59; rNcor=172; rlogoDP=178; rNsEucl=128; rNSW=68; rank_mean=121.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 148 335 27 39 66 320 70 0 c 0 0 0 0 0 0 0 0 0 0 0 787 15 889 934 44 524 828 0 g 0 0 0 0 0 0 0 0 0 0 0 24 634 58 19 865 56 68 0 t 0 0 0 0 0 0 0 0 0 0 0 41 17 26 8 26 101 34 0

ORA47_ORA47_2_ArabidopsisPBM_shift9 (ORA47:ORA47_2:ArabidopsisPBM) 0.577 0.480 5.242 0.866 0.819 173 62 54 151 170 122.000
; oligos_6-8nt_m4 versus ORA47_ORA47_2_ArabidopsisPBM (ORA47:ORA47_2:ArabidopsisPBM); m=125/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 122; ---------kGCGCCGmCy ; cor=0.577; Ncor=0.480; logoDP=5.242; NsEucl=0.866; NSW=0.819; rcor=173; rNcor=62; rlogoDP=54; rNsEucl=151; rNSW=170; rank_mean=122.000; match_rank= a 0 0 0 0 0 0 0 0 0 17 9 1 7 0 1 1 25 4 21 c 0 0 0 0 0 0 0 0 0 5 13 93 1 97 98 0 65 93 25 g 0 0 0 0 0 0 0 0 0 31 73 2 92 3 1 98 5 1 12 t 0 0 0 0 0 0 0 0 0 47 5 4 0 0 0 1 5 2 42

RRTF1_RRTF1_3_ArabidopsisPBM_shift10 (RRTF1:RRTF1_3:ArabidopsisPBM) 0.634 0.439 5.476 0.862 0.828 125 136 29 168 153 122.200
; oligos_6-8nt_m4 versus RRTF1_RRTF1_3_ArabidopsisPBM (RRTF1:RRTF1_3:ArabidopsisPBM); m=126/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 122.2; ----------sCGCCGCCA ; cor=0.634; Ncor=0.439; logoDP=5.476; NsEucl=0.862; NSW=0.828; rcor=125; rNcor=136; rlogoDP=29; rNsEucl=168; rNSW=153; rank_mean=122.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 6 5 0 0 2 1 7 17 81 c 0 0 0 0 0 0 0 0 0 0 30 92 0 97 97 1 81 77 4 g 0 0 0 0 0 0 0 0 0 0 60 2 99 3 0 98 1 0 8 t 0 0 0 0 0 0 0 0 0 0 4 1 1 0 1 0 11 6 7

DREB1B_DREB1B_Athamap_shift9 (DREB1B:DREB1B:Athamap) 0.607 0.467 5.883 0.861 0.807 155 77 12 172 196 122.400
; oligos_6-8nt_m4 versus DREB1B_DREB1B_Athamap (DREB1B:DREB1B:Athamap); m=127/241; ncol2=11; w=0; offset=2; strand=D; shift=9; score= 122.4; ---------AykrCCGACm ; cor=0.607; Ncor=0.467; logoDP=5.883; NsEucl=0.861; NSW=0.807; rcor=155; rNcor=77; rlogoDP=12; rNsEucl=172; rNSW=196; rank_mean=122.400; match_rank= a 0 0 0 0 0 0 0 0 0 3 0 0 1 0 0 0 3 0 1 c 0 0 0 0 0 0 0 0 0 0 1 0 0 3 3 0 0 3 2 g 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 3 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0

RAP2.6_RAP2.6_3_ArabidopsisPBM_rc_shift11 (RAP2.6:RAP2.6_3:ArabidopsisPBM_rc) 0.736 0.421 0.426 0.881 0.886 55 179 231 89 64 123.600
; oligos_6-8nt_m4 versus RAP2.6_RAP2.6_3_ArabidopsisPBM_rc (RAP2.6:RAP2.6_3:ArabidopsisPBM_rc); m=128/241; ncol2=10; w=0; offset=4; strand=R; shift=11; score= 123.6; -----------wGCCGTCA ; cor=0.736; Ncor=0.421; logoDP=0.426; NsEucl=0.881; NSW=0.886; rcor=55; rNcor=179; rlogoDP=231; rNsEucl=89; rNSW=64; rank_mean=123.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 32 3 1 3 1 17 13 71 c 0 0 0 0 0 0 0 0 0 0 0 2 0 97 96 0 7 72 13 g 0 0 0 0 0 0 0 0 0 0 0 16 96 1 1 98 8 1 2 t 0 0 0 0 0 0 0 0 0 0 0 50 1 1 0 1 68 14 14

DREB2C_DREB2C_ArabidopsisPBM_rc_shift8 (DREB2C:DREB2C:ArabidopsisPBM_rc) 0.592 0.494 5.589 0.858 0.800 162 45 23 184 207 124.200
; oligos_6-8nt_m4 versus DREB2C_DREB2C_ArabidopsisPBM_rc (DREB2C:DREB2C:ArabidopsisPBM_rc); m=129/241; ncol2=10; w=0; offset=1; strand=R; shift=8; score= 124.2; --------gGCGGCCGCc- ; cor=0.592; Ncor=0.494; logoDP=5.589; NsEucl=0.858; NSW=0.800; rcor=162; rNcor=45; rlogoDP=23; rNsEucl=184; rNSW=207; rank_mean=124.200; match_rank= a 0 0 0 0 0 0 0 0 13 3 0 1 2 0 0 3 3 14 0 c 0 0 0 0 0 0 0 0 7 2 96 5 0 97 94 1 93 67 0 g 0 0 0 0 0 0 0 0 67 93 0 94 97 0 5 96 1 4 0 t 0 0 0 0 0 0 0 0 13 2 4 0 1 3 1 0 3 15 0

ERF118_MA1671.1_JASPAR_shift8 (ERF118:MA1671.1:JASPAR) 0.526 0.482 5.316 0.869 0.812 201 60 45 136 184 125.200
; oligos_6-8nt_m4 versus ERF118_MA1671.1_JASPAR (ERF118:MA1671.1:JASPAR); m=130/241; ncol2=11; w=0; offset=1; strand=D; shift=8; score= 125.2; --------cdcCGCCGCcr ; cor=0.526; Ncor=0.482; logoDP=5.316; NsEucl=0.869; NSW=0.812; rcor=201; rNcor=60; rlogoDP=45; rNsEucl=136; rNSW=184; rank_mean=125.200; match_rank= a 0 0 0 0 0 0 0 0 703 977 254 30 195 0 19 170 2 593 931 c 0 0 0 0 0 0 0 0 1819 385 2309 3343 8 3396 3370 9 3338 1903 292 g 0 0 0 0 0 0 0 0 234 1143 354 0 3186 2 3 3190 11 286 1537 t 0 0 0 0 0 0 0 0 643 894 482 26 10 1 7 30 48 617 639

RAP2.3_RAP2.3_3_ArabidopsisPBM_shift10 (RAP2.3:RAP2.3_3:ArabidopsisPBM) 0.639 0.442 4.340 0.870 0.848 121 127 126 133 124 126.200
; oligos_6-8nt_m4 versus RAP2.3_RAP2.3_3_ArabidopsisPBM (RAP2.3:RAP2.3_3:ArabidopsisPBM); m=131/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 126.2; ----------gCGCCGCCA ; cor=0.639; Ncor=0.442; logoDP=4.340; NsEucl=0.870; NSW=0.848; rcor=121; rNcor=127; rlogoDP=126; rNsEucl=133; rNSW=124; rank_mean=126.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 14 21 0 0 8 1 16 8 73 c 0 0 0 0 0 0 0 0 0 0 16 70 0 98 91 22 70 90 3 g 0 0 0 0 0 0 0 0 0 0 65 3 100 1 0 76 4 0 6 t 0 0 0 0 0 0 0 0 0 0 5 6 0 1 1 1 10 2 18

RRTF1_RRTF1_2_ArabidopsisPBM_shift10 (RRTF1:RRTF1_2:ArabidopsisPBM) 0.629 0.436 5.548 0.860 0.824 127 145 24 176 160 126.400
; oligos_6-8nt_m4 versus RRTF1_RRTF1_2_ArabidopsisPBM (RRTF1:RRTF1_2:ArabidopsisPBM); m=132/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 126.4; ----------sCGCCGCmA ; cor=0.629; Ncor=0.436; logoDP=5.548; NsEucl=0.860; NSW=0.824; rcor=127; rNcor=145; rlogoDP=24; rNsEucl=176; rNSW=160; rank_mean=126.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 7 10 0 0 1 0 2 44 90 c 0 0 0 0 0 0 0 0 0 0 46 87 1 97 98 1 91 54 2 g 0 0 0 0 0 0 0 0 0 0 43 2 99 3 1 98 2 1 3 t 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 1 5 1 5

RAP2-10_MA0980.2_JASPAR_shift10 (RAP2-10:MA0980.2:JASPAR) 0.671 0.403 5.012 0.871 0.851 106 231 66 127 118 129.600
; oligos_6-8nt_m4 versus RAP2-10_MA0980.2_JASPAR (RAP2-10:MA0980.2:JASPAR); m=133/241; ncol2=12; w=0; offset=3; strand=D; shift=10; score= 129.6; ----------yyrCCGACA ; cor=0.671; Ncor=0.403; logoDP=5.012; NsEucl=0.871; NSW=0.851; rcor=106; rNcor=231; rlogoDP=66; rNsEucl=127; rNSW=118; rank_mean=129.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 477 467 1041 16 9 16 2503 10 2443 c 0 0 0 0 0 0 0 0 0 0 694 733 48 2516 2544 6 19 2539 29 g 0 0 0 0 0 0 0 0 0 0 291 280 1374 6 9 2534 10 7 65 t 0 0 0 0 0 0 0 0 0 0 1106 1088 105 30 6 12 36 12 31

ASIL1_M1618_1.02_CISBP_shift10 (ASIL1:M1618_1.02:CISBP) 0.624 0.432 0.938 0.885 0.880 132 150 221 79 72 130.800
; oligos_6-8nt_m4 versus ASIL1_M1618_1.02_CISBP (ASIL1:M1618_1.02:CISBP); m=134/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 130.8; ----------wydyCGrhr ; cor=0.624; Ncor=0.432; logoDP=0.938; NsEucl=0.885; NSW=0.880; rcor=132; rNcor=150; rlogoDP=221; rNsEucl=79; rNSW=72; rank_mean=130.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 26 23 31 21 10 14 28 28 30 c 0 0 0 0 0 0 0 0 0 0 20 28 10 44 71 5 7 31 19 g 0 0 0 0 0 0 0 0 0 0 22 19 31 7 5 71 44 10 28 t 0 0 0 0 0 0 0 0 0 0 32 30 28 28 14 10 21 31 23

ERF1_ERF1_ArabidopsisPBM_shift9 (ERF1:ERF1:ArabidopsisPBM) 0.566 0.471 5.129 0.863 0.813 179 69 61 162 183 130.800
; oligos_6-8nt_m4 versus ERF1_ERF1_ArabidopsisPBM (ERF1:ERF1:ArabidopsisPBM); m=135/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 130.8; ---------rsCGCCGCCa ; cor=0.566; Ncor=0.471; logoDP=5.129; NsEucl=0.863; NSW=0.813; rcor=179; rNcor=69; rlogoDP=61; rNsEucl=162; rNSW=183; rank_mean=130.800; match_rank= a 0 0 0 0 0 0 0 0 0 37 6 15 1 1 4 2 5 1 58 c 0 0 0 0 0 0 0 0 0 12 33 82 1 96 95 0 90 97 5 g 0 0 0 0 0 0 0 0 0 28 46 1 97 2 0 97 2 1 24 t 0 0 0 0 0 0 0 0 0 23 15 2 1 1 1 1 3 1 13

ARF1_MA0942.2_JASPAR_shift12 (ARF1:MA0942.2:JASPAR) 0.723 0.422 5.143 0.850 0.842 70 178 59 218 130 131.000
; oligos_6-8nt_m4 versus ARF1_MA0942.2_JASPAR (ARF1:MA0942.2:JASPAR); m=136/241; ncol2=7; w=0; offset=5; strand=D; shift=12; score= 131; ------------RCCGACA ; cor=0.723; Ncor=0.422; logoDP=5.143; NsEucl=0.850; NSW=0.842; rcor=70; rNcor=178; rlogoDP=59; rNsEucl=218; rNSW=130; rank_mean=131.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 722 3 4 4 989 2 901 c 0 0 0 0 0 0 0 0 0 0 0 0 2 993 993 2 3 993 4 g 0 0 0 0 0 0 0 0 0 0 0 0 276 1 2 992 1 2 88 t 0 0 0 0 0 0 0 0 0 0 0 0 1 4 2 1 7 2 8

RRTF1_RRTF1_ArabidopsisPBM_shift9 (RRTF1:RRTF1:ArabidopsisPBM) 0.563 0.469 5.271 0.862 0.810 182 74 49 167 185 131.400
; oligos_6-8nt_m4 versus RRTF1_RRTF1_ArabidopsisPBM (RRTF1:RRTF1:ArabidopsisPBM); m=137/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 131.4; ---------gsCGCCGCCA ; cor=0.563; Ncor=0.469; logoDP=5.271; NsEucl=0.862; NSW=0.810; rcor=182; rNcor=74; rlogoDP=49; rNsEucl=167; rNSW=185; rank_mean=131.400; match_rank= a 0 0 0 0 0 0 0 0 0 24 4 5 0 0 1 0 4 21 69 c 0 0 0 0 0 0 0 0 0 15 29 94 1 83 98 1 86 77 2 g 0 0 0 0 0 0 0 0 0 46 66 1 99 17 1 99 1 0 21 t 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 9 2 8

TZP2_EEAD0062_EEADannot_rc_shift7 (TZP2:EEAD0062:EEADannot_rc) 0.566 0.453 2.283 0.889 0.853 178 106 208 54 113 131.800
; oligos_6-8nt_m4 versus TZP2_EEAD0062_EEADannot_rc (TZP2:EEAD0062:EEADannot_rc); m=138/241; ncol2=15; w=0; offset=0; strand=R; shift=7; score= 131.8; -------wwwarGCCCAww ; cor=0.566; Ncor=0.453; logoDP=2.283; NsEucl=0.889; NSW=0.853; rcor=178; rNcor=106; rlogoDP=208; rNsEucl=54; rNSW=113; rank_mean=131.800; match_rank= a 0 0 0 0 0 0 0 30 32 30 40 46 0 0 0 0 100 38 31 c 0 0 0 0 0 0 0 21 23 20 19 0 0 100 100 100 0 13 18 g 0 0 0 0 0 0 0 20 16 17 17 54 100 0 0 0 0 10 14 t 0 0 0 0 0 0 0 29 29 33 24 0 0 0 0 0 0 39 37

Auxin_6sdg_AB_3D-footprint_rc_shift0 (Auxin:6sdg_AB:3D-footprint_rc) 0.667 0.400 1.484 0.900 0.879 111 241 215 18 74 131.800
; oligos_6-8nt_m4 versus Auxin_6sdg_AB_3D-footprint_rc (Auxin:6sdg_AB:3D-footprint_rc); m=139/241; ncol2=20; w=-7; offset=-7; strand=R; shift=0; score= 131.8; TGTngGCnnnnnGCCgACA ; cor=0.667; Ncor=0.400; logoDP=1.484; NsEucl=0.900; NSW=0.879; rcor=111; rNcor=241; rlogoDP=215; rNsEucl=18; rNSW=74; rank_mean=131.800; match_rank= a 0 0 5 24 6 0 0 24 24 24 24 24 0 0 0 10 96 0 96 c 0 0 6 24 10 0 96 24 24 24 24 24 0 96 96 15 0 96 0 g 0 96 5 24 65 96 0 24 24 24 24 24 96 0 0 60 0 0 0 t 96 0 80 24 15 0 0 24 24 24 24 24 0 0 0 11 0 0 0

NtERF2_NtERF2_Athamap_shift11 (NtERF2:NtERF2:Athamap) 0.712 0.415 3.270 0.868 0.878 78 191 175 142 76 132.400
; oligos_6-8nt_m4 versus NtERF2_NtERF2_Athamap (NtERF2:NtERF2:Athamap); m=140/241; ncol2=7; w=0; offset=4; strand=D; shift=11; score= 132.4; -----------yGCCGCC- ; cor=0.712; Ncor=0.415; logoDP=3.270; NsEucl=0.868; NSW=0.878; rcor=78; rNcor=191; rlogoDP=175; rNsEucl=142; rNSW=76; rank_mean=132.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 1 2 0 0 c 0 0 0 0 0 0 0 0 0 0 0 7 1 10 11 0 10 13 0 g 0 0 0 0 0 0 0 0 0 0 0 1 12 3 2 13 2 1 0 t 0 0 0 0 0 0 0 0 0 0 0 4 1 0 1 0 0 0 0

NAC74_B73_1_m1_EEAD0487_EEADannot_shift8 (NAC74_B73_1_m1:EEAD0487:EEADannot) 0.507 0.465 4.121 0.879 0.839 209 82 135 102 138 133.200
; oligos_6-8nt_m4 versus NAC74_B73_1_m1_EEAD0487_EEADannot (NAC74_B73_1_m1:EEAD0487:EEADannot); m=141/241; ncol2=11; w=0; offset=1; strand=D; shift=8; score= 133.2; --------crryGsCGTgs ; cor=0.507; Ncor=0.465; logoDP=4.121; NsEucl=0.879; NSW=0.839; rcor=209; rNcor=82; rlogoDP=135; rNsEucl=102; rNSW=138; rank_mean=133.200; match_rank= a 0 0 0 0 0 0 0 0 24 34 45 0 11 13 2 0 0 22 19 c 0 0 0 0 0 0 0 0 48 4 4 47 0 51 98 0 0 22 37 g 0 0 0 0 0 0 0 0 14 59 43 0 83 34 0 100 19 43 28 t 0 0 0 0 0 0 0 0 14 3 8 53 6 2 0 0 81 13 16

ERF13.ampDAP_M0032_AthalianaCistrome_rc_shift7 (ERF13.ampDAP:M0032:AthalianaCistrome_rc) 0.545 0.436 4.563 0.882 0.834 189 142 109 85 147 134.400
; oligos_6-8nt_m4 versus ERF13.ampDAP_M0032_AthalianaCistrome_rc (ERF13.ampDAP:M0032:AthalianaCistrome_rc); m=142/241; ncol2=15; w=0; offset=0; strand=R; shift=7; score= 134.4; -------cckymGCCGCCr ; cor=0.545; Ncor=0.436; logoDP=4.563; NsEucl=0.882; NSW=0.834; rcor=189; rNcor=142; rlogoDP=109; rNsEucl=85; rNSW=147; rank_mean=134.400; match_rank= a 0 0 0 0 0 0 0 97 138 142 24 235 1 0 5 0 43 0 271 c 0 0 0 0 0 0 0 268 255 64 288 307 0 576 573 0 484 575 6 g 0 0 0 0 0 0 0 78 58 156 111 31 577 0 0 577 0 0 201 t 0 0 0 0 0 0 0 135 127 216 155 5 0 2 0 1 51 3 100

RAP2.6_RAP2.6_ArabidopsisPBM_shift9 (RAP2.6:RAP2.6:ArabidopsisPBM) 0.562 0.469 5.617 0.858 0.798 183 75 21 185 209 134.600
; oligos_6-8nt_m4 versus RAP2.6_RAP2.6_ArabidopsisPBM (RAP2.6:RAP2.6:ArabidopsisPBM); m=143/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 134.6; ---------gSCGCCGCCr ; cor=0.562; Ncor=0.469; logoDP=5.617; NsEucl=0.858; NSW=0.798; rcor=183; rNcor=75; rlogoDP=21; rNsEucl=185; rNSW=209; rank_mean=134.600; match_rank= a 0 0 0 0 0 0 0 0 0 12 3 3 1 0 2 0 2 7 30 c 0 0 0 0 0 0 0 0 0 19 28 95 0 90 98 0 95 92 3 g 0 0 0 0 0 0 0 0 0 48 68 1 99 10 0 100 1 0 61 t 0 0 0 0 0 0 0 0 0 21 1 1 0 0 0 0 2 1 6

RAP2-11_MA1266.2_JASPAR_shift7 (RAP2-11:MA1266.2:JASPAR) 0.491 0.450 5.522 0.868 0.808 216 111 25 141 191 136.800
; oligos_6-8nt_m4 versus RAP2-11_MA1266.2_JASPAR (RAP2-11:MA1266.2:JASPAR); m=144/241; ncol2=11; w=0; offset=0; strand=D; shift=7; score= 136.8; -------ycdycGCCGkC- ; cor=0.491; Ncor=0.450; logoDP=5.522; NsEucl=0.868; NSW=0.808; rcor=216; rNcor=111; rlogoDP=25; rNsEucl=141; rNSW=191; rank_mean=136.800; match_rank= a 0 0 0 0 0 0 0 69 86 163 15 61 25 0 0 0 0 0 0 c 0 0 0 0 0 0 0 248 342 42 323 373 0 588 588 0 112 560 0 g 0 0 0 0 0 0 0 39 41 220 42 71 539 0 0 588 329 0 0 t 0 0 0 0 0 0 0 232 119 163 208 83 24 0 0 0 147 28 0

PHYPA_011264_MA2395.1_JASPAR_shift11 (PHYPA_011264:MA2395.1:JASPAR) 0.646 0.430 5.330 0.851 0.823 120 156 43 212 164 139.000
; oligos_6-8nt_m4 versus PHYPA_011264_MA2395.1_JASPAR (PHYPA_011264:MA2395.1:JASPAR); m=145/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 139; -----------CACCGACm ; cor=0.646; Ncor=0.430; logoDP=5.330; NsEucl=0.851; NSW=0.823; rcor=120; rNcor=156; rlogoDP=43; rNsEucl=212; rNSW=164; rank_mean=139.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 177 782 0.43 0.43 0.43 999 0.43 571 c 0 0 0 0 0 0 0 0 0 0 0 705 0.43 999 999 0.43 0.43 999 286 g 0 0 0 0 0 0 0 0 0 0 0 0.59 217 0.43 0.43 999 0.43 0.43 72 t 0 0 0 0 0 0 0 0 0 0 0 118 0.43 0.43 0.43 0.43 0.43 0.43 72

EREB201_ZmCRF3_Mo17_1_EEAD0340_EEADannot_rc_shift9 (EREB201_ZmCRF3_Mo17_1:EEAD0340:EEADannot_rc) 0.601 0.462 4.102 0.865 0.818 159 90 136 155 172 142.400
; oligos_6-8nt_m4 versus EREB201_ZmCRF3_Mo17_1_EEAD0340_EEADannot_rc (EREB201_ZmCRF3_Mo17_1:EEAD0340:EEADannot_rc); m=146/241; ncol2=11; w=0; offset=2; strand=R; shift=9; score= 142.4; ---------sCkGCCGGCC ; cor=0.601; Ncor=0.462; logoDP=4.102; NsEucl=0.865; NSW=0.818; rcor=159; rNcor=90; rlogoDP=136; rNsEucl=155; rNSW=172; rank_mean=142.400; match_rank= a 0 0 0 0 0 0 0 0 0 7 3 2 0 0 2 0 0 0 0 c 0 0 0 0 0 0 0 0 0 43 71 20 0 100 98 1 4 100 77 g 0 0 0 0 0 0 0 0 0 46 10 36 100 0 0 99 88 0 17 t 0 0 0 0 0 0 0 0 0 4 16 42 0 0 0 0 8 0 6

ERF076_MA1001.4_JASPAR_shift10 (ERF076:MA1001.4:JASPAR) 0.616 0.427 4.908 0.861 0.825 144 168 73 175 156 143.200
; oligos_6-8nt_m4 versus ERF076_MA1001.4_JASPAR (ERF076:MA1001.4:JASPAR); m=147/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 143.2; ----------cCGCCGCCr ; cor=0.616; Ncor=0.427; logoDP=4.908; NsEucl=0.861; NSW=0.825; rcor=144; rNcor=168; rlogoDP=73; rNsEucl=175; rNSW=156; rank_mean=143.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 138 193 59 4 16 76 9 40 852 c 0 0 0 0 0 0 0 0 0 0 830 1008 6 1347 1346 2 1281 1304 5 g 0 0 0 0 0 0 0 0 0 0 181 63 1270 13 5 1271 9 11 435 t 0 0 0 0 0 0 0 0 0 0 224 109 38 9 6 24 74 18 81

DRE1C_MA0985.1_JASPAR_rc_shift12 (DRE1C:MA0985.1:JASPAR_rc) 0.770 0.415 0.433 0.861 0.865 35 193 230 169 91 143.600
; oligos_6-8nt_m4 versus DRE1C_MA0985.1_JASPAR_rc (DRE1C:MA0985.1:JASPAR_rc); m=148/241; ncol2=8; w=0; offset=5; strand=R; shift=12; score= 143.6; ------------rCCGACA ; cor=0.770; Ncor=0.415; logoDP=0.433; NsEucl=0.861; NSW=0.865; rcor=35; rNcor=193; rlogoDP=230; rNsEucl=169; rNSW=91; rank_mean=143.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 495 3 3 3 990 3 990 c 0 0 0 0 0 0 0 0 0 0 0 0 5 990 990 3 3 990 3 g 0 0 0 0 0 0 0 0 0 0 0 0 495 3 3 990 3 3 3 t 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 3 3 3 3

CBF3.ampDAP_M0041_AthalianaCistrome_rc_shift10 (CBF3.ampDAP:M0041:AthalianaCistrome_rc) 0.674 0.433 0.284 0.872 0.854 101 147 238 121 111 143.600
; oligos_6-8nt_m4 versus CBF3.ampDAP_M0041_AthalianaCistrome_rc (CBF3.ampDAP:M0041:AthalianaCistrome_rc); m=149/241; ncol2=11; w=0; offset=3; strand=R; shift=10; score= 143.6; ----------yyrCCGACA ; cor=0.674; Ncor=0.433; logoDP=0.284; NsEucl=0.872; NSW=0.854; rcor=101; rNcor=147; rlogoDP=238; rNsEucl=121; rNSW=111; rank_mean=143.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 77 50 318 0 0 0 598 0 460 c 0 0 0 0 0 0 0 0 0 0 186 198 0 591 598 0 0 598 42 g 0 0 0 0 0 0 0 0 0 0 45 112 280 0 0 598 0 0 57 t 0 0 0 0 0 0 0 0 0 0 290 238 0 7 0 0 0 0 39

ERF073_MA1754.2_JASPAR_shift8 (ERF073:MA1754.2:JASPAR) 0.500 0.459 5.727 0.860 0.784 212 97 16 178 226 145.800
; oligos_6-8nt_m4 versus ERF073_MA1754.2_JASPAR (ERF073:MA1754.2:JASPAR); m=150/241; ncol2=11; w=0; offset=1; strand=D; shift=8; score= 145.8; --------ckCCGCCGCCr ; cor=0.500; Ncor=0.459; logoDP=5.727; NsEucl=0.860; NSW=0.784; rcor=212; rNcor=97; rlogoDP=16; rNsEucl=178; rNSW=226; rank_mean=145.800; match_rank= a 0 0 0 0 0 0 0 0 181 169 34 25 32 0 0 12 0 94 506 c 0 0 0 0 0 0 0 0 648 89 742 975 0 993 1000 0 948 837 0 g 0 0 0 0 0 0 0 0 28 377 155 0 968 0 0 975 0 14 380 t 0 0 0 0 0 0 0 0 142 366 69 0 0 7 0 12 52 55 114

CRF4_MA0976.3_JASPAR_shift10 (CRF4:MA0976.3:JASPAR) 0.614 0.425 4.832 0.861 0.825 147 171 82 174 155 145.800
; oligos_6-8nt_m4 versus CRF4_MA0976.3_JASPAR (CRF4:MA0976.3:JASPAR); m=151/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 145.8; ----------cCGCCGCCr ; cor=0.614; Ncor=0.425; logoDP=4.832; NsEucl=0.861; NSW=0.825; rcor=147; rNcor=171; rlogoDP=82; rNsEucl=174; rNSW=155; rank_mean=145.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 165 249 89 4 10 113 10 55 1104 c 0 0 0 0 0 0 0 0 0 0 1167 1377 4 1865 1866 2 1794 1804 12 g 0 0 0 0 0 0 0 0 0 0 247 111 1744 22 15 1734 9 16 653 t 0 0 0 0 0 0 0 0 0 0 321 163 63 9 9 51 87 25 131

At5g08750.DAP_M0344_AthalianaCistrome_shift6 (At5g08750.DAP:M0344:AthalianaCistrome) 0.515 0.412 4.340 0.887 0.846 206 203 127 66 127 145.800
; oligos_6-8nt_m4 versus At5g08750.DAP_M0344_AthalianaCistrome (At5g08750.DAP:M0344:AthalianaCistrome); m=152/241; ncol2=15; w=-1; offset=-1; strand=D; shift=6; score= 145.8; ------rmmwymRCCGyAa ; cor=0.515; Ncor=0.412; logoDP=4.340; NsEucl=0.887; NSW=0.846; rcor=206; rNcor=203; rlogoDP=127; rNsEucl=66; rNSW=127; rank_mean=145.800; match_rank= a 0 0 0 0 0 0 251 166 164 194 78 318 179 4 2 19 42 553 358 c 0 0 0 0 0 0 82 230 250 47 263 198 0 493 598 0 380 8 53 g 0 0 0 0 0 0 157 61 69 147 19 71 420 0 0 581 2 26 82 t 0 0 0 0 0 0 110 143 117 212 240 13 1 103 0 0 176 13 107

Zm00001d031796_MA1831.1_JASPAR_shift8 (Zm00001d031796:MA1831.1:JASPAR) 0.538 0.455 3.986 0.872 0.819 192 100 145 125 169 146.200
; oligos_6-8nt_m4 versus Zm00001d031796_MA1831.1_JASPAR (Zm00001d031796:MA1831.1:JASPAR); m=153/241; ncol2=12; w=0; offset=1; strand=D; shift=8; score= 146.2; --------ssACGGCGACg ; cor=0.538; Ncor=0.455; logoDP=3.986; NsEucl=0.872; NSW=0.819; rcor=192; rNcor=100; rlogoDP=145; rNsEucl=125; rNSW=169; rank_mean=146.200; match_rank= a 0 0 0 0 0 0 0 0 1688 1680 11164 199 309 1454 227 282 10265 242 2022 c 0 0 0 0 0 0 0 0 6667 3534 807 13089 323 655 13138 514 1019 12691 2882 g 0 0 0 0 0 0 0 0 3858 7250 1352 257 13025 11443 239 12856 2008 634 7673 t 0 0 0 0 0 0 0 0 1608 1357 498 276 164 269 217 169 529 254 1244

FTQ4_M0030_1.02_CISBP_rc_shift12 (FTQ4:M0030_1.02:CISBP_rc) 0.769 0.414 0.434 0.860 0.863 37 195 229 177 93 146.200
; oligos_6-8nt_m4 versus FTQ4_M0030_1.02_CISBP_rc (FTQ4:M0030_1.02:CISBP_rc); m=154/241; ncol2=8; w=0; offset=5; strand=R; shift=12; score= 146.2; ------------rCCGACA ; cor=0.769; Ncor=0.414; logoDP=0.434; NsEucl=0.860; NSW=0.863; rcor=37; rNcor=195; rlogoDP=229; rNsEucl=177; rNSW=93; rank_mean=146.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 99 0 100 c 0 0 0 0 0 0 0 0 0 0 0 0 0 99 99 0 0 100 0 g 0 0 0 0 0 0 0 0 0 0 0 0 50 0 1 100 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0

TINY_MA1220.2_JASPAR_shift10 (TINY:MA1220.2:JASPAR) 0.590 0.442 5.251 0.855 0.810 165 128 52 201 186 146.400
; oligos_6-8nt_m4 versus TINY_MA1220.2_JASPAR (TINY:MA1220.2:JASPAR); m=155/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 146.4; ----------yCRCCGACA ; cor=0.590; Ncor=0.442; logoDP=5.251; NsEucl=0.855; NSW=0.810; rcor=165; rNcor=128; rlogoDP=52; rNsEucl=201; rNSW=186; rank_mean=146.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 55 41 408 0 0 0 534 0 485 c 0 0 0 0 0 0 0 0 0 0 320 432 0 596 596 0 33 596 2 g 0 0 0 0 0 0 0 0 0 0 53 23 186 0 0 596 0 0 95 t 0 0 0 0 0 0 0 0 0 0 168 100 2 0 0 0 29 0 14

Zm00001d002364_MA1832.1_JASPAR_shift7 (Zm00001d002364:MA1832.1:JASPAR) 0.494 0.453 6.072 0.860 0.783 214 107 6 181 228 147.200
; oligos_6-8nt_m4 versus Zm00001d002364_MA1832.1_JASPAR (Zm00001d002364:MA1832.1:JASPAR); m=156/241; ncol2=11; w=0; offset=0; strand=D; shift=7; score= 147.2; -------ccGCCGCCGcc- ; cor=0.494; Ncor=0.453; logoDP=6.072; NsEucl=0.860; NSW=0.783; rcor=214; rNcor=107; rlogoDP=6; rNsEucl=181; rNSW=228; rank_mean=147.200; match_rank= a 0 0 0 0 0 0 0 2288 1747 1536 0 0 0 0 0 0 1785 1941 0 c 0 0 0 0 0 0 0 9863 11808 2981 19090 19090 0 19090 19090 0 11009 11352 0 g 0 0 0 0 0 0 0 4044 3334 13670 0 0 19090 0 0 19090 3546 3763 0 t 0 0 0 0 0 0 0 2895 2201 903 0 0 0 0 0 0 2750 2034 0

gw1.8.141.1_M0075_1.02_CISBP_rc_shift11 (gw1.8.141.1:M0075_1.02:CISBP_rc) 0.647 0.431 4.663 0.851 0.823 116 154 98 210 163 148.200
; oligos_6-8nt_m4 versus gw1.8.141.1_M0075_1.02_CISBP_rc (gw1.8.141.1:M0075_1.02:CISBP_rc); m=157/241; ncol2=8; w=0; offset=4; strand=R; shift=11; score= 148.2; -----------CACCGACm ; cor=0.647; Ncor=0.431; logoDP=4.663; NsEucl=0.851; NSW=0.823; rcor=116; rNcor=154; rlogoDP=98; rNsEucl=210; rNSW=163; rank_mean=148.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 18 78 0 0 0 100 0 57 c 0 0 0 0 0 0 0 0 0 0 0 70 0 100 100 0 0 100 29 g 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 100 0 0 7 t 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 7

ERF024Ved_EEAD0158_EEADannot_rc_shift7 (ERF024Ved:EEAD0158:EEADannot_rc) 0.532 0.426 3.512 0.885 0.841 197 170 163 78 134 148.400
; oligos_6-8nt_m4 versus ERF024Ved_EEAD0158_EEADannot_rc (ERF024Ved:EEAD0158:EEADannot_rc); m=158/241; ncol2=15; w=0; offset=0; strand=R; shift=7; score= 148.4; -------yckyyRCCGmCr ; cor=0.532; Ncor=0.426; logoDP=3.512; NsEucl=0.885; NSW=0.841; rcor=197; rNcor=170; rlogoDP=163; rNsEucl=78; rNSW=134; rank_mean=148.400; match_rank= a 0 0 0 0 0 0 0 13 10 17 6 6 27 0 0 0 42 0 42 c 0 0 0 0 0 0 0 50 57 11 56 58 2 95 100 0 36 100 0 g 0 0 0 0 0 0 0 8 14 39 5 8 68 0 0 99 0 0 56 t 0 0 0 0 0 0 0 29 19 33 33 28 3 5 0 1 22 0 2

DDF2.DAP_M0129_AthalianaCistrome_rc_shift7 (DDF2.DAP:M0129:AthalianaCistrome_rc) 0.552 0.442 2.667 0.883 0.837 187 130 200 83 143 148.600
; oligos_6-8nt_m4 versus DDF2.DAP_M0129_AthalianaCistrome_rc (DDF2.DAP:M0129:AthalianaCistrome_rc); m=159/241; ncol2=15; w=0; offset=0; strand=R; shift=7; score= 148.6; -------yykyyGyCGACA ; cor=0.552; Ncor=0.442; logoDP=2.667; NsEucl=0.883; NSW=0.837; rcor=187; rNcor=130; rlogoDP=200; rNsEucl=83; rNSW=143; rank_mean=148.600; match_rank= a 0 0 0 0 0 0 0 77 52 69 36 10 71 0 0 0 311 0 300 c 0 0 0 0 0 0 0 92 125 56 93 155 0 193 311 0 0 311 0 g 0 0 0 0 0 0 0 39 48 84 23 13 239 0 0 311 0 0 9 t 0 0 0 0 0 0 0 103 86 102 159 133 1 118 0 0 0 0 2

Zm00001d052229_MA1818.1_JASPAR_shift8 (Zm00001d052229:MA1818.1:JASPAR) 0.532 0.444 6.016 0.855 0.790 196 125 8 200 219 149.600
; oligos_6-8nt_m4 versus Zm00001d052229_MA1818.1_JASPAR (Zm00001d052229:MA1818.1:JASPAR); m=160/241; ncol2=10; w=0; offset=1; strand=D; shift=8; score= 149.6; --------cgCCGCCGcc- ; cor=0.532; Ncor=0.444; logoDP=6.016; NsEucl=0.855; NSW=0.790; rcor=196; rNcor=125; rlogoDP=8; rNsEucl=200; rNSW=219; rank_mean=149.600; match_rank= a 0 0 0 0 0 0 0 0 975 1193 0 0 0 0 0 0 977 920 0 c 0 0 0 0 0 0 0 0 4801 1587 8956 8956 0 8956 8956 0 5049 5142 0 g 0 0 0 0 0 0 0 0 2029 5207 0 0 8956 0 0 8956 1720 1908 0 t 0 0 0 0 0 0 0 0 1151 969 0 0 0 0 0 0 1210 986 0

PHYPADRAFT_28324_MA1023.1_JASPAR_rc_shift11 (PHYPADRAFT_28324:MA1023.1:JASPAR_rc) 0.646 0.431 4.662 0.851 0.823 118 155 99 214 165 150.200
; oligos_6-8nt_m4 versus PHYPADRAFT_28324_MA1023.1_JASPAR_rc (PHYPADRAFT_28324:MA1023.1:JASPAR_rc); m=161/241; ncol2=8; w=0; offset=4; strand=R; shift=11; score= 150.2; -----------CACCGACm ; cor=0.646; Ncor=0.431; logoDP=4.662; NsEucl=0.851; NSW=0.823; rcor=118; rNcor=155; rlogoDP=99; rNsEucl=214; rNSW=165; rank_mean=150.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 177 782 0 0 0 999 0 571 c 0 0 0 0 0 0 0 0 0 0 0 705 0 999 999 0 0 999 286 g 0 0 0 0 0 0 0 0 0 0 0 1 217 0 0 999 0 0 72 t 0 0 0 0 0 0 0 0 0 0 0 118 0 0 0 0 0 0 72

IG1_MA2418.1_JASPAR_shift10 (IG1:MA2418.1:JASPAR) 0.599 0.449 4.635 0.857 0.815 160 113 103 196 180 150.400
; oligos_6-8nt_m4 versus IG1_MA2418.1_JASPAR (IG1:MA2418.1:JASPAR); m=162/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 150.4; ----------CtGCCGCCA ; cor=0.599; Ncor=0.449; logoDP=4.635; NsEucl=0.857; NSW=0.815; rcor=160; rNcor=113; rlogoDP=103; rNsEucl=196; rNSW=180; rank_mean=150.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 583 213 91 103 150 166 64 114 5972 c 0 0 0 0 0 0 0 0 0 0 5874 1865 217 7665 7586 114 7805 7732 443 g 0 0 0 0 0 0 0 0 0 0 1149 663 7717 293 237 7736 188 218 1478 t 0 0 0 0 0 0 0 0 0 0 561 5426 142 106 194 151 110 103 274

Zm00001d031796_MA1831.2_JASPAR_shift9 (Zm00001d031796:MA1831.2:JASPAR) 0.560 0.467 3.982 0.863 0.813 184 79 146 161 182 150.400
; oligos_6-8nt_m4 versus Zm00001d031796_MA1831.2_JASPAR (Zm00001d031796:MA1831.2:JASPAR); m=163/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 150.4; ---------sACGGCGACg ; cor=0.560; Ncor=0.467; logoDP=3.982; NsEucl=0.863; NSW=0.813; rcor=184; rNcor=79; rlogoDP=146; rNsEucl=161; rNSW=182; rank_mean=150.400; match_rank= a 0 0 0 0 0 0 0 0 0 1680 11164 199 309 1454 227 282 10265 242 2022 c 0 0 0 0 0 0 0 0 0 3534 807 13089 323 655 13138 514 1019 12691 2882 g 0 0 0 0 0 0 0 0 0 7250 1352 257 13025 11443 239 12856 2008 634 7673 t 0 0 0 0 0 0 0 0 0 1357 498 276 164 269 217 169 529 254 1244

DEAR3_DEAR3_2_ArabidopsisPBM_shift9 (DEAR3:DEAR3_2:ArabidopsisPBM) 0.545 0.454 3.987 0.866 0.821 191 102 144 148 167 150.400
; oligos_6-8nt_m4 versus DEAR3_DEAR3_2_ArabidopsisPBM (DEAR3:DEAR3_2:ArabidopsisPBM); m=164/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 150.4; ---------bgaACCGACs ; cor=0.545; Ncor=0.454; logoDP=3.987; NsEucl=0.866; NSW=0.821; rcor=191; rNcor=102; rlogoDP=144; rNsEucl=148; rNSW=167; rank_mean=150.400; match_rank= a 0 0 0 0 0 0 0 0 0 11 12 59 88 1 3 3 82 2 16 c 0 0 0 0 0 0 0 0 0 33 16 10 2 96 95 2 8 96 31 g 0 0 0 0 0 0 0 0 0 28 60 11 9 1 1 94 6 0 40 t 0 0 0 0 0 0 0 0 0 28 12 20 1 2 1 1 4 2 13

ARF34_MA1693.1_JASPAR_shift7 (ARF34:MA1693.1:JASPAR) 0.500 0.462 3.036 0.879 0.825 213 93 189 100 158 150.600
; oligos_6-8nt_m4 versus ARF34_MA1693.1_JASPAR (ARF34:MA1693.1:JASPAR); m=165/241; ncol2=13; w=0; offset=0; strand=D; shift=7; score= 150.6; -------rrCAGACAGCmr ; cor=0.500; Ncor=0.462; logoDP=3.036; NsEucl=0.879; NSW=0.825; rcor=213; rNcor=93; rlogoDP=189; rNsEucl=100; rNSW=158; rank_mean=150.600; match_rank= a 0 0 0 0 0 0 0 4678 3908 388 11877 363 13106 146 13693 1458 1230 5728 4406 c 0 0 0 0 0 0 0 2573 3118 13025 1396 174 391 13756 172 607 11608 3751 3332 g 0 0 0 0 0 0 0 3827 3747 544 585 13571 622 233 181 10249 825 2708 3589 t 0 0 0 0 0 0 0 3172 3477 293 392 142 131 115 204 1936 587 2063 2923

AT4G32800_M0034_1.02_CISBP_rc_shift11 (AT4G32800:M0034_1.02:CISBP_rc) 0.650 0.433 4.667 0.849 0.816 113 146 97 223 176 151.000
; oligos_6-8nt_m4 versus AT4G32800_M0034_1.02_CISBP_rc (AT4G32800:M0034_1.02:CISBP_rc); m=166/241; ncol2=8; w=0; offset=4; strand=R; shift=11; score= 151; -----------cRCCGACA ; cor=0.650; Ncor=0.433; logoDP=4.667; NsEucl=0.849; NSW=0.816; rcor=113; rNcor=146; rlogoDP=97; rNsEucl=223; rNSW=176; rank_mean=151.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 10 75 0 0 0 100 0 92 c 0 0 0 0 0 0 0 0 0 0 0 60 0 100 100 0 0 100 0 g 0 0 0 0 0 0 0 0 0 0 0 10 25 0 0 100 0 0 8 t 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0

AT1G71450.ampDAP_M0064_AthalianaCistrome_shift7 (AT1G71450.ampDAP:M0064:AthalianaCistrome) 0.463 0.427 4.581 0.879 0.825 226 166 106 101 159 151.600
; oligos_6-8nt_m4 versus AT1G71450.ampDAP_M0064_AthalianaCistrome (AT1G71450.ampDAP:M0064:AthalianaCistrome); m=167/241; ncol2=13; w=0; offset=0; strand=D; shift=7; score= 151.6; -------ycdyCrCCGwCr ; cor=0.463; Ncor=0.427; logoDP=4.581; NsEucl=0.879; NSW=0.825; rcor=226; rNcor=166; rlogoDP=106; rNsEucl=101; rNSW=159; rank_mean=151.600; match_rank= a 0 0 0 0 0 0 0 98 119 166 83 43 342 0 0 18 180 2 286 c 0 0 0 0 0 0 0 203 283 70 206 441 0 557 557 0 121 525 27 g 0 0 0 0 0 0 0 85 26 154 70 0 164 0 0 539 11 0 153 t 0 0 0 0 0 0 0 171 129 167 198 73 51 0 0 0 245 30 91

ARF4_Mo17_1_EEAD0202_EEADannot_shift10 (ARF4_Mo17_1:EEAD0202:EEADannot) 0.624 0.401 3.504 0.873 0.854 133 235 166 120 109 152.600
; oligos_6-8nt_m4 versus ARF4_Mo17_1_EEAD0202_EEADannot (ARF4_Mo17_1:EEAD0202:EEADannot); m=168/241; ncol2=11; w=0; offset=3; strand=D; shift=10; score= 152.6; ----------cvsCCGACA ; cor=0.624; Ncor=0.401; logoDP=3.504; NsEucl=0.873; NSW=0.854; rcor=133; rNcor=235; rlogoDP=166; rNsEucl=120; rNSW=109; rank_mean=152.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 20 41 17 8 18 0 97 0 86 c 0 0 0 0 0 0 0 0 0 0 40 25 40 74 78 0 0 100 14 g 0 0 0 0 0 0 0 0 0 0 21 25 34 15 4 100 3 0 0 t 0 0 0 0 0 0 0 0 0 0 19 9 9 3 0 0 0 0 0

ERF043_MA0996.1_JASPAR_rc_shift11 (ERF043:MA0996.1:JASPAR_rc) 0.649 0.433 4.576 0.849 0.817 114 148 107 222 173 152.800
; oligos_6-8nt_m4 versus ERF043_MA0996.1_JASPAR_rc (ERF043:MA0996.1:JASPAR_rc); m=169/241; ncol2=8; w=0; offset=4; strand=R; shift=11; score= 152.8; -----------cACCGACA ; cor=0.649; Ncor=0.433; logoDP=4.576; NsEucl=0.849; NSW=0.817; rcor=114; rNcor=148; rlogoDP=107; rNsEucl=222; rNSW=173; rank_mean=152.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 101 749 1 1 1 998 1 921 c 0 0 0 0 0 0 0 0 0 0 0 599 1 998 998 1 1 998 1 g 0 0 0 0 0 0 0 0 0 0 0 101 250 1 1 998 1 1 77 t 0 0 0 0 0 0 0 0 0 0 0 200 1 1 1 1 1 1 1

Zm00001d005892_MA1819.2_JASPAR_shift11 (Zm00001d005892:MA1819.2:JASPAR) 0.648 0.432 4.033 0.853 0.828 115 151 141 205 152 152.800
; oligos_6-8nt_m4 versus Zm00001d005892_MA1819.2_JASPAR (Zm00001d005892:MA1819.2:JASPAR); m=170/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 152.8; -----------CGCCGCCG ; cor=0.648; Ncor=0.432; logoDP=4.033; NsEucl=0.853; NSW=0.828; rcor=115; rNcor=151; rlogoDP=141; rNsEucl=205; rNSW=152; rank_mean=152.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 761 795 852 535 795 885 613 1241 c 0 0 0 0 0 0 0 0 0 0 0 24431 767 23527 25251 435 23482 25022 1029 g 0 0 0 0 0 0 0 0 0 0 0 1309 25046 1794 917 25421 1696 990 24113 t 0 0 0 0 0 0 0 0 0 0 0 872 765 1200 670 722 1310 748 990

CBF4_MA1218.1_JASPAR_rc_shift9 (CBF4:MA1218.1:JASPAR_rc) 0.635 0.424 0.282 0.878 0.850 123 174 239 109 119 152.800
; oligos_6-8nt_m4 versus CBF4_MA1218.1_JASPAR_rc (CBF4:MA1218.1:JASPAR_rc); m=171/241; ncol2=13; w=0; offset=2; strand=R; shift=9; score= 152.8; ---------kyyrCCGACa ; cor=0.635; Ncor=0.424; logoDP=0.282; NsEucl=0.878; NSW=0.850; rcor=123; rNcor=174; rlogoDP=239; rNsEucl=109; rNSW=119; rank_mean=152.800; match_rank= a 0 0 0 0 0 0 0 0 0 143 93 57 286 0 0 0 597 0 402 c 0 0 0 0 0 0 0 0 0 88 165 245 0 576 597 0 0 597 52 g 0 0 0 0 0 0 0 0 0 152 65 95 311 0 0 597 0 0 109 t 0 0 0 0 0 0 0 0 0 214 274 200 0 21 0 0 0 0 34

ERF4_MA0992.3_JASPAR_shift10 (ERF4:MA0992.3:JASPAR) 0.582 0.437 5.352 0.852 0.802 171 141 42 209 202 153.000
; oligos_6-8nt_m4 versus ERF4_MA0992.3_JASPAR (ERF4:MA0992.3:JASPAR); m=172/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 153; ----------cCGCCGyCA ; cor=0.582; Ncor=0.437; logoDP=5.352; NsEucl=0.852; NSW=0.802; rcor=171; rNcor=141; rlogoDP=42; rNsEucl=209; rNSW=202; rank_mean=153.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 88 11 24 5 5 9 34 42 827 c 0 0 0 0 0 0 0 0 0 0 644 1005 1 992 1015 0 349 900 19 g 0 0 0 0 0 0 0 0 0 0 165 2 979 9 2 1006 13 25 91 t 0 0 0 0 0 0 0 0 0 0 126 5 19 17 1 8 627 56 86

NAC92_MA1044.1_JASPAR_shift6 (NAC92:MA1044.1:JASPAR) 0.515 0.436 2.675 0.880 0.842 204 143 199 92 131 153.800
; oligos_6-8nt_m4 versus NAC92_MA1044.1_JASPAR (NAC92:MA1044.1:JASPAR); m=173/241; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score= 153.8; ------tarCAmGccAva- ; cor=0.515; Ncor=0.436; logoDP=2.675; NsEucl=0.880; NSW=0.842; rcor=204; rNcor=143; rlogoDP=199; rNsEucl=92; rNSW=131; rank_mean=153.800; match_rank= a 0 0 0 0 0 0 227 318 559 22 909 430 0 224 247 932 274 314 0 c 0 0 0 0 0 0 227 227 80 935 0 480 0 497 607 23 299 229 0 g 0 0 0 0 0 0 227 227 282 22 0 0 1000 92 23 23 256 229 0 t 0 0 0 0 0 0 318 227 80 22 91 91 0 186 123 23 170 229 0

ARF18_B73_1_m1_EEAD0185_EEADannot_shift5 (ARF18_B73_1_m1:EEAD0185:EEADannot) 0.517 0.414 3.092 0.887 0.847 202 196 183 64 126 154.200
; oligos_6-8nt_m4 versus ARF18_B73_1_m1_EEAD0185_EEADannot (ARF18_B73_1_m1:EEAD0185:EEADannot); m=174/241; ncol2=15; w=-2; offset=-2; strand=D; shift=5; score= 154.2; -----rmmarmasCmGACA ; cor=0.517; Ncor=0.414; logoDP=3.092; NsEucl=0.887; NSW=0.847; rcor=202; rNcor=196; rlogoDP=183; rNsEucl=64; rNSW=126; rank_mean=154.200; match_rank= a 0 0 0 0 0 25 46 25 53 28 28 46 23 7 33 1 95 0 94 c 0 0 0 0 0 22 25 47 21 24 37 16 40 72 62 0 0 100 6 g 0 0 0 0 0 44 19 18 15 33 20 23 25 7 5 99 5 0 0 t 0 0 0 0 0 9 10 10 11 15 15 15 12 14 0 0 0 0 0

ERF109_MA1053.1_JASPAR_shift10 (ERF109:MA1053.1:JASPAR) 0.628 0.419 5.089 0.848 0.816 128 183 63 224 177 155.000
; oligos_6-8nt_m4 versus ERF109_MA1053.1_JASPAR (ERF109:MA1053.1:JASPAR); m=175/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 155; ----------sCGCCGCC- ; cor=0.628; Ncor=0.419; logoDP=5.089; NsEucl=0.848; NSW=0.816; rcor=128; rNcor=183; rlogoDP=63; rNsEucl=224; rNSW=177; rank_mean=155.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 38 50 3 3 13 4 38 207 0 c 0 0 0 0 0 0 0 0 0 0 287 936 5 827 982 13 862 773 0 g 0 0 0 0 0 0 0 0 0 0 661 8 989 168 2 978 13 2 0 t 0 0 0 0 0 0 0 0 0 0 13 6 3 2 3 5 86 18 0

NAC2_M1404_1.02_CISBP_shift6 (NAC2:M1404_1.02:CISBP) 0.515 0.436 2.699 0.880 0.841 205 144 198 96 133 155.200
; oligos_6-8nt_m4 versus NAC2_M1404_1.02_CISBP (NAC2:M1404_1.02:CISBP); m=176/241; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score= 155.2; ------tarCAmGcmAva- ; cor=0.515; Ncor=0.436; logoDP=2.699; NsEucl=0.880; NSW=0.841; rcor=205; rNcor=144; rlogoDP=198; rNsEucl=96; rNSW=133; rank_mean=155.200; match_rank= a 0 0 0 0 0 0 23 32 56 2 91 43 0 22 25 93 27 31 0 c 0 0 0 0 0 0 23 23 8 94 0 48 0 50 61 3 30 23 0 g 0 0 0 0 0 0 23 23 28 2 0 0 100 9 2 2 26 23 0 t 0 0 0 0 0 0 31 22 8 2 9 9 0 19 12 2 17 23 0

AT4G16750_MA1237.1_JASPAR_shift5 (AT4G16750:MA1237.1:JASPAR) 0.501 0.401 4.852 0.879 0.825 211 237 77 99 157 156.200
; oligos_6-8nt_m4 versus AT4G16750_MA1237.1_JASPAR (AT4G16750:MA1237.1:JASPAR); m=177/241; ncol2=15; w=-2; offset=-2; strand=D; shift=5; score= 156.2; -----cdycdyCrCCGaCr ; cor=0.501; Ncor=0.401; logoDP=4.852; NsEucl=0.879; NSW=0.825; rcor=211; rNcor=237; rlogoDP=77; rNsEucl=99; rNSW=157; rank_mean=156.200; match_rank= a 0 0 0 0 0 122 186 113 102 161 66 30 366 0 0 10 405 0 385 c 0 0 0 0 0 277 97 226 326 63 301 494 0 593 600 0 110 599 14 g 0 0 0 0 0 72 166 91 41 192 47 20 227 4 0 590 1 0 160 t 0 0 0 0 0 129 151 170 131 184 186 56 7 3 0 0 84 1 41

ERF024PS_EEAD0159_EEADannot_shift7 (ERF024PS:EEAD0159:EEADannot) 0.504 0.403 4.497 0.881 0.831 210 230 114 87 148 157.800
; oligos_6-8nt_m4 versus ERF024PS_EEAD0159_EEADannot (ERF024PS:EEAD0159:EEADannot); m=178/241; ncol2=15; w=0; offset=0; strand=D; shift=7; score= 157.8; -------yckyYGCCGmCr ; cor=0.504; Ncor=0.403; logoDP=4.497; NsEucl=0.881; NSW=0.831; rcor=210; rNcor=230; rlogoDP=114; rNsEucl=87; rNSW=148; rank_mean=157.800; match_rank= a 0 0 0 0 0 0 0 12 11 20 8 3 19 0 0 0 32 0 36 c 0 0 0 0 0 0 0 53 58 9 53 68 3 93 100 0 44 100 0 g 0 0 0 0 0 0 0 10 9 40 3 3 68 0 0 97 0 0 60 t 0 0 0 0 0 0 0 25 22 31 36 26 10 7 0 3 24 0 4

ERF112_MA1245.3_JASPAR_shift10 (ERF112:MA1245.3:JASPAR) 0.585 0.438 4.715 0.854 0.807 168 138 91 203 193 158.600
; oligos_6-8nt_m4 versus ERF112_MA1245.3_JASPAR (ERF112:MA1245.3:JASPAR); m=179/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 158.6; ----------cCGCCGCCr ; cor=0.585; Ncor=0.438; logoDP=4.715; NsEucl=0.854; NSW=0.807; rcor=168; rNcor=138; rlogoDP=91; rNsEucl=203; rNSW=193; rank_mean=158.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 217 168 253 1 38 219 7 38 831 c 0 0 0 0 0 0 0 0 0 0 1507 2246 20 2454 2449 3 2446 2406 73 g 0 0 0 0 0 0 0 0 0 0 361 33 2173 37 1 2236 14 3 1264 t 0 0 0 0 0 0 0 0 0 0 410 48 49 3 7 37 28 48 327

ERF2_MA1262.2_JASPAR_shift7 (ERF2:MA1262.2:JASPAR) 0.466 0.430 4.907 0.870 0.798 223 159 74 131 208 159.000
; oligos_6-8nt_m4 versus ERF2_MA1262.2_JASPAR (ERF2:MA1262.2:JASPAR); m=180/241; ncol2=13; w=0; offset=0; strand=D; shift=7; score= 159; -------ccdcCGCCGCCr ; cor=0.466; Ncor=0.430; logoDP=4.907; NsEucl=0.870; NSW=0.798; rcor=223; rNcor=159; rlogoDP=74; rNsEucl=131; rNSW=208; rank_mean=159.000; match_rank= a 0 0 0 0 0 0 0 65 102 162 34 118 42 3 7 43 0 0 177 c 0 0 0 0 0 0 0 325 348 46 367 451 0 590 588 0 565 595 0 g 0 0 0 0 0 0 0 63 27 190 85 9 509 0 0 550 0 0 353 t 0 0 0 0 0 0 0 142 118 197 109 17 44 2 0 2 30 0 65

DEAR4_DEAR4_2_ArabidopsisPBM_shift9 (DEAR4:DEAR4_2:ArabidopsisPBM) 0.537 0.447 4.657 0.860 0.803 193 122 100 180 201 159.200
; oligos_6-8nt_m4 versus DEAR4_DEAR4_2_ArabidopsisPBM (DEAR4:DEAR4_2:ArabidopsisPBM); m=181/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 159.2; ---------rGCGCCGCCt ; cor=0.537; Ncor=0.447; logoDP=4.657; NsEucl=0.860; NSW=0.803; rcor=193; rNcor=122; rlogoDP=100; rNsEucl=180; rNSW=201; rank_mean=159.200; match_rank= a 0 0 0 0 0 0 0 0 0 29 3 2 12 1 0 1 1 3 4 c 0 0 0 0 0 0 0 0 0 22 13 94 0 91 98 1 83 86 20 g 0 0 0 0 0 0 0 0 0 37 76 2 87 8 1 95 9 2 15 t 0 0 0 0 0 0 0 0 0 12 8 2 1 0 1 3 7 9 61

ERF082_MA1005.3_JASPAR_shift10 (ERF082:MA1005.3:JASPAR) 0.583 0.438 4.840 0.852 0.804 170 140 80 208 200 159.600
; oligos_6-8nt_m4 versus ERF082_MA1005.3_JASPAR (ERF082:MA1005.3:JASPAR); m=182/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 159.6; ----------cCGCCGCCr ; cor=0.583; Ncor=0.438; logoDP=4.840; NsEucl=0.852; NSW=0.804; rcor=170; rNcor=140; rlogoDP=80; rNsEucl=208; rNSW=200; rank_mean=159.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 162 113 186 0 30 149 2 12 658 c 0 0 0 0 0 0 0 0 0 0 1145 1713 8 1878 1844 2 1852 1852 48 g 0 0 0 0 0 0 0 0 0 0 257 16 1658 3 1 1697 7 1 925 t 0 0 0 0 0 0 0 0 0 0 319 41 31 2 8 35 22 18 252

DREB2C_MA0986.1_JASPAR_shift11 (DREB2C:MA0986.1:JASPAR) 0.627 0.418 4.696 0.850 0.819 129 186 93 220 171 159.800
; oligos_6-8nt_m4 versus DREB2C_MA0986.1_JASPAR (DREB2C:MA0986.1:JASPAR); m=183/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 159.8; -----------CACCGACA ; cor=0.627; Ncor=0.418; logoDP=4.696; NsEucl=0.850; NSW=0.819; rcor=129; rNcor=186; rlogoDP=93; rNsEucl=220; rNSW=171; rank_mean=159.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 110 809 4 7 8 776 5 806 c 0 0 0 0 0 0 0 0 0 0 0 757 3 985 986 3 158 977 50 g 0 0 0 0 0 0 0 0 0 0 0 121 185 3 3 984 47 5 27 t 0 0 0 0 0 0 0 0 0 0 0 13 3 8 4 4 19 13 117

BHLH10_UN0688.2_JASPAR_shift10 (BHLH10:UN0688.2:JASPAR) 0.601 0.416 4.741 0.857 0.817 158 189 88 190 175 160.000
; oligos_6-8nt_m4 versus BHLH10_UN0688.2_JASPAR (BHLH10:UN0688.2:JASPAR); m=184/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 160; ----------cCrCCGACA ; cor=0.601; Ncor=0.416; logoDP=4.741; NsEucl=0.857; NSW=0.817; rcor=158; rNcor=189; rlogoDP=88; rNsEucl=190; rNSW=175; rank_mean=160.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 48 31 308 9 3 10 487 7 537 c 0 0 0 0 0 0 0 0 0 0 412 492 1 589 601 1 78 591 7 g 0 0 0 0 0 0 0 0 0 0 42 17 293 7 2 593 16 4 48 t 0 0 0 0 0 0 0 0 0 0 105 67 5 2 1 3 26 5 15

Carub.0001s3581.1.p_AP2EREBP_1_AT1G46768_EEAD0602_EEADannot_rc_shift11 (Carub.0001s3581.1.p_AP2EREBP_1_AT1G46768:EEAD0602:EEADannot_rc) 0.624 0.416 4.266 0.854 0.828 131 190 129 204 150 160.800
; oligos_6-8nt_m4 versus Carub.0001s3581.1.p_AP2EREBP_1_AT1G46768_EEAD0602_EEADannot_rc (Carub.0001s3581.1.p_AP2EREBP_1_AT1G46768:EEAD0602:EEADannot_rc); m=185/241; ncol2=8; w=0; offset=4; strand=R; shift=11; score= 160.8; -----------CACCGACA ; cor=0.624; Ncor=0.416; logoDP=4.266; NsEucl=0.854; NSW=0.828; rcor=131; rNcor=190; rlogoDP=129; rNsEucl=204; rNSW=150; rank_mean=160.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 10 71 0 0 7 71 0 72 c 0 0 0 0 0 0 0 0 0 0 0 78 0 97 100 0 22 100 10 g 0 0 0 0 0 0 0 0 0 0 0 4 19 0 0 92 2 0 16 t 0 0 0 0 0 0 0 0 0 0 0 8 10 3 0 1 5 0 2

EREB138_MA2415.1_JASPAR_shift10 (EREB138:MA2415.1:JASPAR) 0.605 0.419 4.467 0.859 0.820 157 184 116 183 168 161.600
; oligos_6-8nt_m4 versus EREB138_MA2415.1_JASPAR (EREB138:MA2415.1:JASPAR); m=186/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 161.6; ----------cmGCCGCCA ; cor=0.605; Ncor=0.419; logoDP=4.467; NsEucl=0.859; NSW=0.820; rcor=157; rNcor=184; rlogoDP=116; rNsEucl=183; rNSW=168; rank_mean=161.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 718 3337 114 77 186 189 57 78 5531 c 0 0 0 0 0 0 0 0 0 0 3513 2127 183 6069 5826 156 6075 6124 154 g 0 0 0 0 0 0 0 0 0 0 1178 539 5958 134 242 5888 128 99 588 t 0 0 0 0 0 0 0 0 0 0 947 353 101 76 102 123 96 55 83

ATERF1_ATERF1_2_ArabidopsisPBM_rc_shift10 (ATERF1:ATERF1_2:ArabidopsisPBM_rc) 0.592 0.410 4.404 0.863 0.830 164 211 120 166 149 162.000
; oligos_6-8nt_m4 versus ATERF1_ATERF1_2_ArabidopsisPBM_rc (ATERF1:ATERF1_2:ArabidopsisPBM_rc); m=187/241; ncol2=10; w=0; offset=3; strand=R; shift=10; score= 162; ----------ytGCCGGCa ; cor=0.592; Ncor=0.410; logoDP=4.404; NsEucl=0.863; NSW=0.830; rcor=164; rNcor=211; rlogoDP=120; rNsEucl=166; rNSW=149; rank_mean=162.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 16 14 4 3 1 4 1 1 59 c 0 0 0 0 0 0 0 0 0 0 29 15 0 90 95 0 6 94 12 g 0 0 0 0 0 0 0 0 0 0 20 12 94 6 1 95 90 1 15 t 0 0 0 0 0 0 0 0 0 0 35 59 2 1 3 1 3 4 14

Auxin_6sdg_B_3D-footprint_rc_shift12 (Auxin:6sdg_B:3D-footprint_rc) 0.749 0.403 0.153 0.857 0.857 47 227 241 193 105 162.600
; oligos_6-8nt_m4 versus Auxin_6sdg_B_3D-footprint_rc (Auxin:6sdg_B:3D-footprint_rc); m=188/241; ncol2=8; w=0; offset=5; strand=R; shift=12; score= 162.6; ------------GCCgACA ; cor=0.749; Ncor=0.403; logoDP=0.153; NsEucl=0.857; NSW=0.857; rcor=47; rNcor=227; rlogoDP=241; rNsEucl=193; rNSW=105; rank_mean=162.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 96 0 96 c 0 0 0 0 0 0 0 0 0 0 0 0 0 96 96 21 0 96 0 g 0 0 0 0 0 0 0 0 0 0 0 0 96 0 0 42 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0

ERF037_MA1230.2_JASPAR_shift10 (ERF037:MA1230.2:JASPAR) 0.571 0.428 5.396 0.848 0.792 175 163 37 225 216 163.200
; oligos_6-8nt_m4 versus ERF037_MA1230.2_JASPAR (ERF037:MA1230.2:JASPAR); m=189/241; ncol2=9; w=0; offset=3; strand=D; shift=10; score= 163.2; ----------yCRCCGACA ; cor=0.571; Ncor=0.428; logoDP=5.396; NsEucl=0.848; NSW=0.792; rcor=175; rNcor=163; rlogoDP=37; rNsEucl=225; rNSW=216; rank_mean=163.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 47 37 443 0 0 0 589 0 529 c 0 0 0 0 0 0 0 0 0 0 307 446 0 598 598 0 3 598 0 g 0 0 0 0 0 0 0 0 0 0 65 31 155 0 0 598 0 0 62 t 0 0 0 0 0 0 0 0 0 0 179 84 0 0 0 0 6 0 7

Zm00001d002364_MA1832.2_JASPAR_shift8 (Zm00001d002364:MA1832.2:JASPAR) 0.516 0.430 6.067 0.850 0.776 203 160 7 217 230 163.400
; oligos_6-8nt_m4 versus Zm00001d002364_MA1832.2_JASPAR (Zm00001d002364:MA1832.2:JASPAR); m=190/241; ncol2=10; w=0; offset=1; strand=D; shift=8; score= 163.4; --------cGCCGCCGcc- ; cor=0.516; Ncor=0.430; logoDP=6.067; NsEucl=0.850; NSW=0.776; rcor=203; rNcor=160; rlogoDP=7; rNsEucl=217; rNSW=230; rank_mean=163.400; match_rank= a 0 0 0 0 0 0 0 0 1747 1536 0 0 0 0 0 0 1785 1941 0 c 0 0 0 0 0 0 0 0 11808 2981 19090 19090 0 19090 19090 0 11009 11352 0 g 0 0 0 0 0 0 0 0 3334 13670 0 0 19090 0 0 19090 3546 3763 0 t 0 0 0 0 0 0 0 0 2201 903 0 0 0 0 0 0 2750 2034 0

CBF12C_1_EEAD0562_EEADannot_rc_shift8 (CBF12C_1:EEAD0562:EEADannot_rc) 0.621 0.402 0.415 0.881 0.844 136 232 232 88 129 163.400
; oligos_6-8nt_m4 versus CBF12C_1_EEAD0562_EEADannot_rc (CBF12C_1:EEAD0562:EEADannot_rc); m=191/241; ncol2=16; w=0; offset=1; strand=R; shift=8; score= 163.4; --------rsbTGCCGACA ; cor=0.621; Ncor=0.402; logoDP=0.415; NsEucl=0.881; NSW=0.844; rcor=136; rNcor=232; rlogoDP=232; rNsEucl=88; rNSW=129; rank_mean=163.400; match_rank= a 0 0 0 0 0 0 0 0 30 11 3 4 0 0 0 2 72 1 64 c 0 0 0 0 0 0 0 0 16 21 20 0 0 64 74 3 0 72 6 g 0 0 0 0 0 0 0 0 24 30 20 4 76 0 2 70 4 0 0 t 0 0 0 0 0 0 0 0 6 14 33 68 0 12 0 1 0 3 6

ETHYLENE_1gcc_A_3D-footprint_rc_shift10 (ETHYLENE:1gcc_A:3D-footprint_rc) 0.597 0.448 4.355 0.851 0.801 161 117 123 213 205 163.800
; oligos_6-8nt_m4 versus ETHYLENE_1gcc_A_3D-footprint_rc (ETHYLENE:1gcc_A:3D-footprint_rc); m=192/241; ncol2=9; w=0; offset=3; strand=R; shift=10; score= 163.8; ----------TAGCCGCCA ; cor=0.597; Ncor=0.448; logoDP=4.355; NsEucl=0.851; NSW=0.801; rcor=161; rNcor=117; rlogoDP=123; rNsEucl=213; rNSW=205; rank_mean=163.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 8 80 0 0 0 0 8 0 72 c 0 0 0 0 0 0 0 0 0 0 8 8 0 96 96 0 72 96 8 g 0 0 0 0 0 0 0 0 0 0 8 0 96 0 0 96 8 0 8 t 0 0 0 0 0 0 0 0 0 0 72 8 0 0 0 0 8 0 8

EREBP1_EEAD0001_EEADannot_shift7 (EREBP1:EEAD0001:EEADannot) 0.699 0.408 3.226 0.851 0.845 84 216 180 215 128 164.600
; oligos_6-8nt_m4 versus EREBP1_EEAD0001_EEADannot (EREBP1:EEAD0001:EEADannot); m=193/241; ncol2=7; w=0; offset=0; strand=D; shift=7; score= 164.6; -------AGCmGsC----- ; cor=0.699; Ncor=0.408; logoDP=3.226; NsEucl=0.851; NSW=0.845; rcor=84; rNcor=216; rlogoDP=180; rNsEucl=215; rNSW=128; rank_mean=164.600; match_rank= a 0 0 0 0 0 0 0 100 0 0 50 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 100 50 0 50 100 0 0 0 0 0 g 0 0 0 0 0 0 0 0 100 0 0 100 50 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

ERF1_ERF1_Athamap_shift11 (ERF1:ERF1:Athamap) 0.617 0.411 6.138 0.828 0.764 143 206 1 241 234 165.000
; oligos_6-8nt_m4 versus ERF1_ERF1_Athamap (ERF1:ERF1:Athamap); m=194/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 165; -----------AGCCGCCA ; cor=0.617; Ncor=0.411; logoDP=6.138; NsEucl=0.828; NSW=0.764; rcor=143; rNcor=206; rlogoDP=1; rNsEucl=241; rNSW=234; rank_mean=165.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 2 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 2 2 0 g 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

PHYPADRAFT_64121_MA1010.1_JASPAR_rc_shift7 (PHYPADRAFT_64121:MA1010.1:JASPAR_rc) 0.477 0.440 1.367 0.879 0.824 220 133 217 103 161 166.800
; oligos_6-8nt_m4 versus PHYPADRAFT_64121_MA1010.1_JASPAR_rc (PHYPADRAFT_64121:MA1010.1:JASPAR_rc); m=195/241; ncol2=13; w=0; offset=0; strand=R; shift=7; score= 166.8; -------tttwtACCGACA ; cor=0.477; Ncor=0.440; logoDP=1.367; NsEucl=0.879; NSW=0.824; rcor=220; rNcor=133; rlogoDP=217; rNsEucl=103; rNSW=161; rank_mean=166.800; match_rank= a 0 0 0 0 0 0 0 230 230 230 294 164 1000 0 0 20 748 107 877 c 0 0 0 0 0 0 0 230 230 230 209 158 0 912 912 20 125 853 41 g 0 0 0 0 0 0 0 230 230 230 209 70 0 0 87 941 20 20 41 t 0 0 0 0 0 0 0 309 309 309 288 608 0 87 0 20 107 20 41

ONAC127_UN0429.1_JASPAR_shift8 (ONAC127:UN0429.1:JASPAR) 0.484 0.444 3.337 0.868 0.810 217 124 170 139 187 167.400
; oligos_6-8nt_m4 versus ONAC127_UN0429.1_JASPAR (ONAC127:UN0429.1:JASPAR); m=196/241; ncol2=11; w=0; offset=1; strand=D; shift=8; score= 167.4; --------rgAGGAAGAyv ; cor=0.484; Ncor=0.444; logoDP=3.337; NsEucl=0.868; NSW=0.810; rcor=217; rNcor=124; rlogoDP=170; rNsEucl=139; rNSW=187; rank_mean=167.400; match_rank= a 0 0 0 0 0 0 0 0 21 11 49 0 1 50 53 1 51 12 14 c 0 0 0 0 0 0 0 0 9 10 0 3 0 0 1 1 0 15 15 g 0 0 0 0 0 0 0 0 15 27 1 46 48 0 1 52 2 11 21 t 0 0 0 0 0 0 0 0 10 7 5 6 6 5 0 1 2 17 5

Os05g0497200_MA1034.1_JASPAR_shift11 (Os05g0497200:MA1034.1:JASPAR) 0.620 0.413 5.099 0.842 0.801 138 197 62 236 204 167.400
; oligos_6-8nt_m4 versus Os05g0497200_MA1034.1_JASPAR (Os05g0497200:MA1034.1:JASPAR); m=197/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 167.4; -----------CGsCGCCr ; cor=0.620; Ncor=0.413; logoDP=5.099; NsEucl=0.842; NSW=0.801; rcor=138; rNcor=197; rlogoDP=62; rNsEucl=236; rNSW=204; rank_mean=167.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 3 3 3 3 3 3 495 c 0 0 0 0 0 0 0 0 0 0 0 990 3 661 990 3 990 990 5 g 0 0 0 0 0 0 0 0 0 0 0 3 990 332 3 990 3 3 495 t 0 0 0 0 0 0 0 0 0 0 0 3 3 3 3 3 3 3 5

fgenesh1_pg.scaffold_1000495_M0074_1.02_CISBP_rc_shift7 (fgenesh1_pg.scaffold_1000495:M0074_1.02:CISBP_rc) 0.476 0.439 1.362 0.879 0.824 221 134 218 104 162 167.800
; oligos_6-8nt_m4 versus fgenesh1_pg.scaffold_1000495_M0074_1.02_CISBP_rc (fgenesh1_pg.scaffold_1000495:M0074_1.02:CISBP_rc); m=198/241; ncol2=13; w=0; offset=0; strand=R; shift=7; score= 167.8; -------tttwtACCGACA ; cor=0.476; Ncor=0.439; logoDP=1.362; NsEucl=0.879; NSW=0.824; rcor=221; rNcor=134; rlogoDP=218; rNsEucl=104; rNSW=162; rank_mean=167.800; match_rank= a 0 0 0 0 0 0 0 23 23 23 29 16 100 0 0 2 75 11 88 c 0 0 0 0 0 0 0 23 23 23 21 16 0 91 91 2 13 85 4 g 0 0 0 0 0 0 0 23 23 23 21 7 0 0 9 94 1 2 4 t 0 0 0 0 0 0 0 31 31 31 29 61 0 9 0 2 11 2 4

ERF118_MA1671.2_JASPAR_shift10 (ERF118:MA1671.2:JASPAR) 0.613 0.409 5.301 0.844 0.805 150 214 47 235 198 168.800
; oligos_6-8nt_m4 versus ERF118_MA1671.2_JASPAR (ERF118:MA1671.2:JASPAR); m=199/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 168.8; ----------cCGCCGCc- ; cor=0.613; Ncor=0.409; logoDP=5.301; NsEucl=0.844; NSW=0.805; rcor=150; rNcor=214; rlogoDP=47; rNsEucl=235; rNSW=198; rank_mean=168.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 254 30 195 0 19 170 2 593 0 c 0 0 0 0 0 0 0 0 0 0 2309 3343 8 3396 3370 9 3338 1903 0 g 0 0 0 0 0 0 0 0 0 0 354 0 3186 2 3 3190 11 286 0 t 0 0 0 0 0 0 0 0 0 0 482 26 10 1 7 30 48 617 0

RAP2-6_MA1052.1_JASPAR_shift10 (RAP2-6:MA1052.1:JASPAR) 0.614 0.409 5.439 0.839 0.793 148 212 31 239 215 169.000
; oligos_6-8nt_m4 versus RAP2-6_MA1052.1_JASPAR (RAP2-6:MA1052.1:JASPAR); m=200/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 169; ----------SCGCCGCC- ; cor=0.614; Ncor=0.409; logoDP=5.439; NsEucl=0.839; NSW=0.793; rcor=148; rNcor=212; rlogoDP=31; rNsEucl=239; rNSW=215; rank_mean=169.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 34 27 7 2 12 4 20 66 0 c 0 0 0 0 0 0 0 0 0 0 271 958 2 894 985 3 947 921 0 g 0 0 0 0 0 0 0 0 0 0 681 7 989 104 2 990 14 2 0 t 0 0 0 0 0 0 0 0 0 0 14 8 2 1 1 3 20 10 0

TGA1_TGA1_Athamap_shift7 (TGA1:TGA1:Athamap) 0.420 0.420 4.803 0.870 0.797 237 180 85 134 211 169.400
; oligos_6-8nt_m4 versus TGA1_TGA1_Athamap (TGA1:TGA1:Athamap); m=201/241; ncol2=12; w=0; offset=0; strand=D; shift=7; score= 169.4; -------wtsvTGACGtta ; cor=0.420; Ncor=0.420; logoDP=4.803; NsEucl=0.870; NSW=0.797; rcor=237; rNcor=180; rlogoDP=85; rNsEucl=134; rNSW=211; rank_mean=169.400; match_rank= a 0 0 0 0 0 0 0 10 6 7 12 0 0 31 0 0 7 6 18 c 0 0 0 0 0 0 0 4 6 8 8 0 0 0 31 0 3 3 0 g 0 0 0 0 0 0 0 6 6 13 11 0 31 0 0 31 2 6 7 t 0 0 0 0 0 0 0 11 13 3 0 31 0 0 0 0 19 16 6

LOC_Os05g41760_M0043_1.02_CISBP_shift11 (LOC_Os05g41760:M0043_1.02:CISBP) 0.617 0.411 5.203 0.841 0.797 142 204 55 237 210 169.600
; oligos_6-8nt_m4 versus LOC_Os05g41760_M0043_1.02_CISBP (LOC_Os05g41760:M0043_1.02:CISBP); m=202/241; ncol2=8; w=0; offset=4; strand=D; shift=11; score= 169.6; -----------CGsCGCCr ; cor=0.617; Ncor=0.411; logoDP=5.203; NsEucl=0.841; NSW=0.797; rcor=142; rNcor=204; rlogoDP=55; rNsEucl=237; rNSW=210; rank_mean=169.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 50 c 0 0 0 0 0 0 0 0 0 0 0 100 0 66 100 0 99 100 0 g 0 0 0 0 0 0 0 0 0 0 0 0 99 34 0 99 0 0 50 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0

ERF077_MA1240.2_JASPAR_shift10 (ERF077:MA1240.2:JASPAR) 0.584 0.404 5.023 0.854 0.808 169 224 65 202 190 170.000
; oligos_6-8nt_m4 versus ERF077_MA1240.2_JASPAR (ERF077:MA1240.2:JASPAR); m=203/241; ncol2=10; w=0; offset=3; strand=D; shift=10; score= 170; ----------cCGCCGCCr ; cor=0.584; Ncor=0.404; logoDP=5.023; NsEucl=0.854; NSW=0.808; rcor=169; rNcor=224; rlogoDP=65; rNsEucl=202; rNSW=190; rank_mean=170.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 35 23 38 0 0 27 5 34 195 c 0 0 0 0 0 0 0 0 0 0 342 538 0 571 571 0 511 528 0 g 0 0 0 0 0 0 0 0 0 0 75 6 448 0 0 544 0 0 323 t 0 0 0 0 0 0 0 0 0 0 119 4 85 0 0 0 55 9 53

ETT_ETT_ArabidopsisPBM_rc_shift10 (ETT:ETT:ArabidopsisPBM_rc) 0.592 0.410 4.421 0.857 0.817 163 210 117 188 174 170.400
; oligos_6-8nt_m4 versus ETT_ETT_ArabidopsisPBM_rc (ETT:ETT:ArabidopsisPBM_rc); m=204/241; ncol2=10; w=0; offset=3; strand=R; shift=10; score= 170.4; ----------dttCCGACA ; cor=0.592; Ncor=0.410; logoDP=4.421; NsEucl=0.857; NSW=0.817; rcor=163; rNcor=210; rlogoDP=117; rNsEucl=188; rNSW=174; rank_mean=170.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 26 14 5 1 1 1 98 1 92 c 0 0 0 0 0 0 0 0 0 0 12 19 21 96 98 0 0 99 8 g 0 0 0 0 0 0 0 0 0 0 28 9 12 2 1 99 2 0 0 t 0 0 0 0 0 0 0 0 0 0 34 58 62 1 0 0 0 0 0

PHYPADRAFT_173530_MA1007.1_JASPAR_rc_shift11 (PHYPADRAFT_173530:MA1007.1:JASPAR_rc) 0.618 0.412 4.680 0.845 0.809 140 199 96 231 188 170.800
; oligos_6-8nt_m4 versus PHYPADRAFT_173530_MA1007.1_JASPAR_rc (PHYPADRAFT_173530:MA1007.1:JASPAR_rc); m=205/241; ncol2=8; w=0; offset=4; strand=R; shift=11; score= 170.8; -----------mACCGACm ; cor=0.618; Ncor=0.412; logoDP=4.680; NsEucl=0.845; NSW=0.809; rcor=140; rNcor=199; rlogoDP=96; rNsEucl=231; rNSW=188; rank_mean=170.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 250 849 0 0 0 949 0 642 c 0 0 0 0 0 0 0 0 0 0 0 665 0 999 999 0 0 999 286 g 0 0 0 0 0 0 0 0 0 0 0 1 150 0 0 999 0 0 1 t 0 0 0 0 0 0 0 0 0 0 0 84 0 0 0 0 50 0 72

Solyc06g051120.4.1_TRIHELIX_4_AT5G05550_EEAD0653_EEADannot_shift8 (Solyc06g051120.4.1_TRIHELIX_4_AT5G05550:EEAD0653:EEADannot) 0.463 0.425 4.255 0.868 0.808 225 173 130 140 189 171.400
; oligos_6-8nt_m4 versus Solyc06g051120.4.1_TRIHELIX_4_AT5G05550_EEAD0653_EEADannot (Solyc06g051120.4.1_TRIHELIX_4_AT5G05550:EEAD0653:EEADannot); m=206/241; ncol2=11; w=0; offset=1; strand=D; shift=8; score= 171.4; --------hkTCrCCGGAr ; cor=0.463; Ncor=0.425; logoDP=4.255; NsEucl=0.868; NSW=0.808; rcor=225; rNcor=173; rlogoDP=130; rNsEucl=140; rNSW=189; rank_mean=171.400; match_rank= a 0 0 0 0 0 0 0 0 25 22 6 2 29 4 0 0 1 72 40 c 0 0 0 0 0 0 0 0 36 20 16 74 3 79 99 0 1 17 6 g 0 0 0 0 0 0 0 0 11 30 6 6 67 0 0 100 94 7 52 t 0 0 0 0 0 0 0 0 28 28 72 18 1 17 1 0 4 4 2

ARF3_MA1009.1_JASPAR_rc_shift11 (ARF3:MA1009.1:JASPAR_rc) 0.621 0.414 4.380 0.848 0.815 137 194 122 226 181 172.000
; oligos_6-8nt_m4 versus ARF3_MA1009.1_JASPAR_rc (ARF3:MA1009.1:JASPAR_rc); m=207/241; ncol2=8; w=0; offset=4; strand=R; shift=11; score= 172; -----------ttCCGACA ; cor=0.621; Ncor=0.414; logoDP=4.380; NsEucl=0.848; NSW=0.815; rcor=137; rNcor=194; rlogoDP=122; rNsEucl=226; rNSW=181; rank_mean=172.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 139 46 10 10 6 981 3 917 c 0 0 0 0 0 0 0 0 0 0 0 191 212 964 980 1 2 991 77 g 0 0 0 0 0 0 0 0 0 0 0 95 124 24 8 990 16 3 4 t 0 0 0 0 0 0 0 0 0 0 0 575 618 3 2 2 1 2 2

GRF4_EEAD0016_EEADannot_shift7 (GRF4:EEAD0016:EEADannot) 0.441 0.441 4.237 0.867 0.788 234 131 132 143 220 172.000
; oligos_6-8nt_m4 versus GRF4_EEAD0016_EEADannot (GRF4:EEAD0016:EEADannot); m=208/241; ncol2=12; w=0; offset=0; strand=D; shift=7; score= 172; -------ccGCCGCCGCcg ; cor=0.441; Ncor=0.441; logoDP=4.237; NsEucl=0.867; NSW=0.788; rcor=234; rNcor=131; rlogoDP=132; rNsEucl=143; rNSW=220; rank_mean=172.000; match_rank= a 0 0 0 0 0 0 0 98 85 36 14 28 23 20 21 26 29 77 97 c 0 0 0 0 0 0 0 445 463 32 723 707 13 738 715 15 697 447 147 g 0 0 0 0 0 0 0 132 137 704 35 28 741 21 32 722 38 159 441 t 0 0 0 0 0 0 0 121 111 24 24 33 19 17 28 33 32 113 111

estExt_fgenesh1_pg.C_4800009_M0072_1.02_CISBP_rc_shift11 (estExt_fgenesh1_pg.C_4800009:M0072_1.02:CISBP_rc) 0.618 0.412 4.682 0.845 0.808 141 201 95 232 192 172.200
; oligos_6-8nt_m4 versus estExt_fgenesh1_pg.C_4800009_M0072_1.02_CISBP_rc (estExt_fgenesh1_pg.C_4800009:M0072_1.02:CISBP_rc); m=209/241; ncol2=8; w=0; offset=4; strand=R; shift=11; score= 172.2; -----------mACCGACm ; cor=0.618; Ncor=0.412; logoDP=4.682; NsEucl=0.845; NSW=0.808; rcor=141; rNcor=201; rlogoDP=95; rNsEucl=232; rNSW=192; rank_mean=172.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 25 85 0 0 0 95 0 64 c 0 0 0 0 0 0 0 0 0 0 0 67 0 100 100 0 0 100 29 g 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 100 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 5 0 7

ERF6_MA1006.2_JASPAR_rc_shift12 (ERF6:MA1006.2:JASPAR_rc) 0.704 0.410 1.445 0.847 0.837 81 207 216 228 145 175.400
; oligos_6-8nt_m4 versus ERF6_MA1006.2_JASPAR_rc (ERF6:MA1006.2:JASPAR_rc); m=210/241; ncol2=7; w=0; offset=5; strand=R; shift=12; score= 175.4; ------------GCCGGCa ; cor=0.704; Ncor=0.410; logoDP=1.445; NsEucl=0.847; NSW=0.837; rcor=81; rNcor=207; rlogoDP=216; rNsEucl=228; rNSW=145; rank_mean=175.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 535 c 0 0 0 0 0 0 0 0 0 0 0 0 0 912 1000 0 0 1000 166 g 0 0 0 0 0 0 0 0 0 0 0 0 1000 88 0 1000 1000 0 221 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 78

Zm00001d005892_MA1819.1_JASPAR_shift9 (Zm00001d005892:MA1819.1:JASPAR) 0.564 0.403 4.073 0.864 0.815 181 229 137 159 179 177.000
; oligos_6-8nt_m4 versus Zm00001d005892_MA1819.1_JASPAR (Zm00001d005892:MA1819.1:JASPAR); m=211/241; ncol2=12; w=0; offset=2; strand=D; shift=9; score= 177; ---------scCGCCGCCG ; cor=0.564; Ncor=0.403; logoDP=4.073; NsEucl=0.864; NSW=0.815; rcor=181; rNcor=229; rlogoDP=137; rNsEucl=159; rNSW=179; rank_mean=177.000; match_rank= a 0 0 0 0 0 0 0 0 0 3849 3675 761 795 852 535 795 885 613 1241 c 0 0 0 0 0 0 0 0 0 7060 11954 24431 767 23527 25251 435 23482 25022 1029 g 0 0 0 0 0 0 0 0 0 12797 6742 1309 25046 1794 917 25421 1696 990 24113 t 0 0 0 0 0 0 0 0 0 3667 5002 872 765 1200 670 722 1310 748 990

LEC2_MA0581.1_JASPAR_shift7 (LEC2:MA0581.1:JASPAR) 0.462 0.423 4.005 0.865 0.800 227 175 143 153 206 180.800
; oligos_6-8nt_m4 versus LEC2_MA0581.1_JASPAR (LEC2:MA0581.1:JASPAR); m=212/241; ncol2=11; w=0; offset=0; strand=D; shift=7; score= 180.8; -------tsCATGCrcwt- ; cor=0.462; Ncor=0.423; logoDP=4.005; NsEucl=0.865; NSW=0.800; rcor=227; rNcor=175; rlogoDP=143; rNsEucl=153; rNSW=206; rank_mean=180.800; match_rank= a 0 0 0 0 0 0 0 107 96 2 487 0 0 0 301 115 228 96 0 c 0 0 0 0 0 0 0 86 163 475 0 0 0 487 30 218 86 79 0 g 0 0 0 0 0 0 0 119 165 0 0 0 487 0 156 60 44 62 0 t 0 0 0 0 0 0 0 175 63 10 0 487 0 0 0 94 129 250 0

ERF091_MA1228.2_JASPAR_rc_shift7 (ERF091:MA1228.2:JASPAR_rc) 0.464 0.429 3.894 0.866 0.784 224 162 153 149 225 182.600
; oligos_6-8nt_m4 versus ERF091_MA1228.2_JASPAR_rc (ERF091:MA1228.2:JASPAR_rc); m=213/241; ncol2=13; w=0; offset=0; strand=R; shift=7; score= 182.6; -------cckCCGCCGCCr ; cor=0.464; Ncor=0.429; logoDP=3.894; NsEucl=0.866; NSW=0.784; rcor=224; rNcor=162; rlogoDP=153; rNsEucl=149; rNSW=225; rank_mean=182.600; match_rank= a 0 0 0 0 0 0 0 73 84 121 5 52 19 0 0 11 0 3 170 c 0 0 0 0 0 0 0 288 337 32 378 472 0 537 537 0 503 534 0 g 0 0 0 0 0 0 0 48 25 205 69 7 505 0 0 526 0 0 289 t 0 0 0 0 0 0 0 128 91 179 85 6 13 0 0 0 34 0 78

RAP2-10_MA0980.1_JASPAR_shift10 (RAP2-10:MA0980.1:JASPAR) 0.605 0.404 4.650 0.844 0.805 156 226 101 234 197 182.800
; oligos_6-8nt_m4 versus RAP2-10_MA0980.1_JASPAR (RAP2-10:MA0980.1:JASPAR); m=214/241; ncol2=8; w=0; offset=3; strand=D; shift=10; score= 182.8; ----------GCGCCGCC- ; cor=0.605; Ncor=0.404; logoDP=4.650; NsEucl=0.844; NSW=0.805; rcor=156; rNcor=226; rlogoDP=101; rNsEucl=234; rNSW=197; rank_mean=182.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 33 22 117 6 4 9 8 33 0 c 0 0 0 0 0 0 0 0 0 0 128 942 5 912 981 7 838 859 0 g 0 0 0 0 0 0 0 0 0 0 757 14 872 78 9 952 85 16 0 t 0 0 0 0 0 0 0 0 0 0 83 22 7 4 6 32 69 92 0

ERF3_MA1005.2_JASPAR_shift9 (ERF3:MA1005.2:JASPAR) 0.528 0.406 4.847 0.856 0.792 200 222 79 199 217 183.400
; oligos_6-8nt_m4 versus ERF3_MA1005.2_JASPAR (ERF3:MA1005.2:JASPAR); m=215/241; ncol2=11; w=0; offset=2; strand=D; shift=9; score= 183.4; ---------dcCGCCGCCr ; cor=0.528; Ncor=0.406; logoDP=4.847; NsEucl=0.856; NSW=0.792; rcor=200; rNcor=222; rlogoDP=79; rNsEucl=199; rNSW=217; rank_mean=183.400; match_rank= a 0 0 0 0 0 0 0 0 0 519 162 113 186 0 30 149 2 12 658 c 0 0 0 0 0 0 0 0 0 229 1145 1713 8 1878 1844 2 1852 1852 48 g 0 0 0 0 0 0 0 0 0 644 257 16 1658 3 1 1697 7 1 925 t 0 0 0 0 0 0 0 0 0 491 319 41 31 2 8 35 22 18 252

AT2G33710_MA1245.2_JASPAR_shift9 (AT2G33710:MA1245.2:JASPAR) 0.529 0.407 4.723 0.857 0.795 198 220 90 195 214 183.400
; oligos_6-8nt_m4 versus AT2G33710_MA1245.2_JASPAR (AT2G33710:MA1245.2:JASPAR); m=216/241; ncol2=11; w=0; offset=2; strand=D; shift=9; score= 183.4; ---------dcCGCCGCCr ; cor=0.529; Ncor=0.407; logoDP=4.723; NsEucl=0.857; NSW=0.795; rcor=198; rNcor=220; rlogoDP=90; rNsEucl=195; rNSW=214; rank_mean=183.400; match_rank= a 0 0 0 0 0 0 0 0 0 641 217 168 253 1 38 219 7 38 831 c 0 0 0 0 0 0 0 0 0 302 1507 2246 20 2454 2449 3 2446 2406 73 g 0 0 0 0 0 0 0 0 0 895 361 33 2173 37 1 2236 14 3 1264 t 0 0 0 0 0 0 0 0 0 657 410 48 49 3 7 37 28 48 327

EREB36_ZmDREB1D_B73_1_m1_EEAD0347_EEADannot_rc_shift7 (EREB36_ZmDREB1D_B73_1_m1:EEAD0347:EEADannot_rc) 0.449 0.449 2.813 0.865 0.782 231 114 194 154 229 184.400
; oligos_6-8nt_m4 versus EREB36_ZmDREB1D_B73_1_m1_EEAD0347_EEADannot_rc (EREB36_ZmDREB1D_B73_1_m1:EEAD0347:EEADannot_rc); m=217/241; ncol2=12; w=0; offset=0; strand=R; shift=7; score= 184.4; -------dssATGTCGGCr ; cor=0.449; Ncor=0.449; logoDP=2.813; NsEucl=0.865; NSW=0.782; rcor=231; rNcor=114; rlogoDP=194; rNsEucl=154; rNSW=229; rank_mean=184.400; match_rank= a 0 0 0 0 0 0 0 30 14 4 79 8 0 0 0 0 4 0 51 c 0 0 0 0 0 0 0 18 36 36 6 4 0 0 100 0 0 98 12 g 0 0 0 0 0 0 0 27 31 48 2 11 100 0 0 100 96 0 35 t 0 0 0 0 0 0 0 25 19 12 13 77 0 100 0 0 0 2 2

WER_WER_Athamap_rc_shift7 (WER:WER:Athamap_rc) 0.446 0.412 0.825 0.878 0.823 232 200 223 106 166 185.400
; oligos_6-8nt_m4 versus WER_WER_Athamap_rc (WER:WER:Athamap_rc); m=218/241; ncol2=13; w=0; offset=0; strand=R; shift=7; score= 185.4; -------kACwrrcrkwrw ; cor=0.446; Ncor=0.412; logoDP=0.825; NsEucl=0.878; NSW=0.823; rcor=232; rNcor=200; rlogoDP=223; rNsEucl=106; rNSW=166; rank_mean=185.400; match_rank= a 0 0 0 0 0 0 0 0 5 0 4 2 3 1 4 0 4 2 4 c 0 0 0 0 0 0 0 0 0 5 0 0 0 4 0 0 0 0 0 g 0 0 0 0 0 0 0 4 1 1 0 4 2 0 2 3 0 4 0 t 0 0 0 0 0 0 0 2 0 0 2 0 1 1 0 3 2 0 2

ABI3_MA0564.1_JASPAR_rc_shift7 (ABI3:MA0564.1:JASPAR_rc) 0.571 0.428 0.952 0.857 0.816 176 164 220 192 178 186.000
; oligos_6-8nt_m4 versus ABI3_MA0564.1_JASPAR_rc (ABI3:MA0564.1:JASPAR_rc); m=219/241; ncol2=9; w=0; offset=0; strand=R; shift=7; score= 186; -------tGCATGCar--- ; cor=0.571; Ncor=0.428; logoDP=0.952; NsEucl=0.857; NSW=0.816; rcor=176; rNcor=164; rlogoDP=220; rNsEucl=192; rNSW=178; rank_mean=186.000; match_rank= a 0 0 0 0 0 0 0 22 2 1 97 1 1 5 53 25 0 0 0 c 0 0 0 0 0 0 0 13 8 96 1 1 2 85 15 9 0 0 0 g 0 0 0 0 0 0 0 15 84 1 1 1 96 7 16 60 0 0 0 t 0 0 0 0 0 0 0 50 6 1 1 97 1 3 15 6 0 0 0

ERF105_MA1000.3_JASPAR_rc_shift10 (ERF105:MA1000.3:JASPAR_rc) 0.588 0.407 4.501 0.850 0.796 167 219 113 219 213 186.200
; oligos_6-8nt_m4 versus ERF105_MA1000.3_JASPAR_rc (ERF105:MA1000.3:JASPAR_rc); m=220/241; ncol2=10; w=0; offset=3; strand=R; shift=10; score= 186.2; ----------cCGCCGCCr ; cor=0.588; Ncor=0.407; logoDP=4.501; NsEucl=0.850; NSW=0.796; rcor=167; rNcor=219; rlogoDP=113; rNsEucl=219; rNSW=213; rank_mean=186.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 17 62 21 0 0 16 0 0 229 c 0 0 0 0 0 0 0 0 0 0 382 523 0 585 586 0 565 586 0 g 0 0 0 0 0 0 0 0 0 0 109 0 544 1 0 569 0 0 307 t 0 0 0 0 0 0 0 0 0 0 78 1 21 0 0 1 21 0 50

ERF036_MA1253.2_JASPAR_rc_shift11 (ERF036:MA1253.2:JASPAR_rc) 0.614 0.409 4.006 0.845 0.807 149 213 142 233 195 186.400
; oligos_6-8nt_m4 versus ERF036_MA1253.2_JASPAR_rc (ERF036:MA1253.2:JASPAR_rc); m=221/241; ncol2=8; w=0; offset=4; strand=R; shift=11; score= 186.4; -----------CACCGACA ; cor=0.614; Ncor=0.409; logoDP=4.006; NsEucl=0.845; NSW=0.807; rcor=149; rNcor=213; rlogoDP=142; rNsEucl=233; rNSW=195; rank_mean=186.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 47 463 0 0 2 556 25 435 c 0 0 0 0 0 0 0 0 0 0 0 444 16 555 561 0 5 479 33 g 0 0 0 0 0 0 0 0 0 0 0 20 55 0 0 559 0 32 55 t 0 0 0 0 0 0 0 0 0 0 0 50 27 6 0 0 0 25 38

RAP21_MA1216.1_JASPAR_rc_shift7 (RAP21:MA1216.1:JASPAR_rc) 0.450 0.415 3.511 0.870 0.797 230 192 164 135 212 186.600
; oligos_6-8nt_m4 versus RAP21_MA1216.1_JASPAR_rc (RAP21:MA1216.1:JASPAR_rc); m=222/241; ncol2=13; w=0; offset=0; strand=R; shift=7; score= 186.6; -------ycdcCRCCGmCa ; cor=0.450; Ncor=0.415; logoDP=3.511; NsEucl=0.870; NSW=0.797; rcor=230; rNcor=192; rlogoDP=164; rNsEucl=135; rNSW=212; rank_mean=186.600; match_rank= a 0 0 0 0 0 0 0 113 114 186 36 23 432 0 0 0 380 1 391 c 0 0 0 0 0 0 0 244 303 49 363 567 0 590 590 0 148 589 60 g 0 0 0 0 0 0 0 74 63 184 76 0 158 0 0 590 1 0 85 t 0 0 0 0 0 0 0 159 110 171 115 0 0 0 0 0 61 0 54

ABR1_MA1244.2_JASPAR_rc_shift8 (ABR1:MA1244.2:JASPAR_rc) 0.510 0.431 0.270 0.867 0.805 208 152 240 145 199 188.800
; oligos_6-8nt_m4 versus ABR1_MA1244.2_JASPAR_rc (ABR1:MA1244.2:JASPAR_rc); m=223/241; ncol2=12; w=0; offset=1; strand=R; shift=8; score= 188.8; --------CkCCGCCGyma ; cor=0.510; Ncor=0.431; logoDP=0.270; NsEucl=0.867; NSW=0.805; rcor=208; rNcor=152; rlogoDP=240; rNsEucl=145; rNSW=199; rank_mean=188.800; match_rank= a 0 0 0 0 0 0 0 0 77 76 17 35 12 0 2 8 22 218 386 c 0 0 0 0 0 0 0 0 421 30 445 550 0 588 598 0 401 308 14 g 0 0 0 0 0 0 0 0 36 298 105 10 584 12 0 590 27 15 97 t 0 0 0 0 0 0 0 0 66 196 33 5 4 0 0 2 150 59 103

ERF095_MA1264.2_JASPAR_rc_shift7 (ERF095:MA1264.2:JASPAR_rc) 0.454 0.419 3.636 0.866 0.784 229 182 159 150 227 189.400
; oligos_6-8nt_m4 versus ERF095_MA1264.2_JASPAR_rc (ERF095:MA1264.2:JASPAR_rc); m=224/241; ncol2=13; w=0; offset=0; strand=R; shift=7; score= 189.4; -------cCkCCGCCGCCr ; cor=0.454; Ncor=0.419; logoDP=3.636; NsEucl=0.866; NSW=0.784; rcor=229; rNcor=182; rlogoDP=159; rNsEucl=150; rNSW=227; rank_mean=189.400; match_rank= a 0 0 0 0 0 0 0 79 74 126 7 77 53 0 0 18 0 0 176 c 0 0 0 0 0 0 0 318 402 43 423 503 0 587 591 0 534 587 2 g 0 0 0 0 0 0 0 51 25 231 85 6 525 4 0 570 2 0 335 t 0 0 0 0 0 0 0 143 90 191 76 5 13 0 0 3 55 4 78

ERF122_MA1261.2_JASPAR_rc_shift8 (ERF122:MA1261.2:JASPAR_rc) 0.492 0.410 3.247 0.861 0.807 215 209 176 171 194 193.000
; oligos_6-8nt_m4 versus ERF122_MA1261.2_JASPAR_rc (ERF122:MA1261.2:JASPAR_rc); m=225/241; ncol2=10; w=0; offset=1; strand=R; shift=8; score= 193; --------mdCmGCCGyr- ; cor=0.492; Ncor=0.410; logoDP=3.247; NsEucl=0.861; NSW=0.807; rcor=215; rNcor=209; rlogoDP=176; rNsEucl=171; rNSW=194; rank_mean=193.000; match_rank= a 0 0 0 0 0 0 0 0 37 35 7 46 32 0 2 18 3 77 0 c 0 0 0 0 0 0 0 0 91 9 106 89 0 138 136 0 80 16 0 g 0 0 0 0 0 0 0 0 10 53 0 3 106 0 0 120 0 35 0 t 0 0 0 0 0 0 0 0 0 41 25 0 0 0 0 0 55 10 0

ERF034_MA1229.2_JASPAR_rc_shift10 (ERF034:MA1229.2:JASPAR_rc) 0.559 0.419 3.858 0.847 0.790 185 181 156 227 218 193.400
; oligos_6-8nt_m4 versus ERF034_MA1229.2_JASPAR_rc (ERF034:MA1229.2:JASPAR_rc); m=226/241; ncol2=9; w=0; offset=3; strand=R; shift=10; score= 193.4; ----------yCACCGACA ; cor=0.559; Ncor=0.419; logoDP=3.858; NsEucl=0.847; NSW=0.790; rcor=185; rNcor=181; rlogoDP=156; rNsEucl=227; rNSW=218; rank_mean=193.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 48 33 446 0 0 0 528 0 448 c 0 0 0 0 0 0 0 0 0 0 287 434 0 560 560 0 14 560 2 g 0 0 0 0 0 0 0 0 0 0 71 19 114 0 0 560 0 0 85 t 0 0 0 0 0 0 0 0 0 0 154 74 0 0 0 0 18 0 25

Zm00001d020267_MA1817.1_JASPAR_shift7 (Zm00001d020267:MA1817.1:JASPAR) 0.440 0.406 4.393 0.863 0.776 235 221 121 163 231 194.200
; oligos_6-8nt_m4 versus Zm00001d020267_MA1817.1_JASPAR (Zm00001d020267:MA1817.1:JASPAR); m=227/241; ncol2=13; w=0; offset=0; strand=D; shift=7; score= 194.2; -------ccGCCGCCGCCg ; cor=0.440; Ncor=0.406; logoDP=4.393; NsEucl=0.863; NSW=0.776; rcor=235; rNcor=221; rlogoDP=121; rNsEucl=163; rNSW=231; rank_mean=194.200; match_rank= a 0 0 0 0 0 0 0 1873 1541 453 299 271 567 308 277 458 379 354 2204 c 0 0 0 0 0 0 0 7440 8346 711 13416 13624 247 13462 13749 233 13257 13267 3064 g 0 0 0 0 0 0 0 3127 2985 13149 683 555 13656 632 446 13639 657 760 7641 t 0 0 0 0 0 0 0 2361 1929 488 403 351 331 399 329 471 508 420 1892

ERF055_MA1263.2_JASPAR_rc_shift10 (ERF055:MA1263.2:JASPAR_rc) 0.545 0.409 3.835 0.851 0.801 190 215 157 211 203 195.200
; oligos_6-8nt_m4 versus ERF055_MA1263.2_JASPAR_rc (ERF055:MA1263.2:JASPAR_rc); m=228/241; ncol2=9; w=0; offset=3; strand=R; shift=10; score= 195.2; ----------cCACCGmCm ; cor=0.545; Ncor=0.409; logoDP=3.835; NsEucl=0.851; NSW=0.801; rcor=190; rNcor=215; rlogoDP=157; rNsEucl=211; rNSW=203; rank_mean=195.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 39 37 459 1 0 0 291 0 226 c 0 0 0 0 0 0 0 0 0 0 378 535 0 597 598 0 171 598 277 g 0 0 0 0 0 0 0 0 0 0 70 18 139 0 0 598 19 0 45 t 0 0 0 0 0 0 0 0 0 0 111 8 0 0 0 0 117 0 50

TCP15_Mo17_1_EEAD0515_EEADannot_rc_shift6 (TCP15_Mo17_1:EEAD0515:EEADannot_rc) 0.467 0.400 3.940 0.867 0.787 222 240 150 144 221 195.400
; oligos_6-8nt_m4 versus TCP15_Mo17_1_EEAD0515_EEADannot_rc (TCP15_Mo17_1:EEAD0515:EEADannot_rc); m=229/241; ncol2=14; w=-1; offset=-1; strand=R; shift=6; score= 195.4; ------gwsYGGGCCCCsa ; cor=0.467; Ncor=0.400; logoDP=3.940; NsEucl=0.867; NSW=0.787; rcor=222; rNcor=240; rlogoDP=150; rNsEucl=144; rNSW=221; rank_mean=195.400; match_rank= a 0 0 0 0 0 0 20 26 13 0 0 0 19 0 0 0 0 6 50 c 0 0 0 0 0 0 15 24 54 70 0 0 0 96 100 100 100 34 10 g 0 0 0 0 0 0 51 20 33 0 100 100 80 4 0 0 0 39 18 t 0 0 0 0 0 0 14 30 0 30 0 0 1 0 0 0 0 21 22

ERF11_MA1001.3_JASPAR_rc_shift7 (ERF11:MA1001.3:JASPAR_rc) 0.407 0.407 3.506 0.863 0.773 239 218 165 165 232 203.800
; oligos_6-8nt_m4 versus ERF11_MA1001.3_JASPAR_rc (ERF11:MA1001.3:JASPAR_rc); m=230/241; ncol2=12; w=0; offset=0; strand=R; shift=7; score= 203.8; -------ygGyGGCGGCGg ; cor=0.407; Ncor=0.407; logoDP=3.506; NsEucl=0.863; NSW=0.773; rcor=239; rNcor=218; rlogoDP=165; rNsEucl=165; rNSW=232; rank_mean=203.800; match_rank= a 0 0 0 0 0 0 0 290 286 157 81 18 74 24 6 9 38 109 224 c 0 0 0 0 0 0 0 522 144 45 435 11 9 1271 5 13 1270 63 181 g 0 0 0 0 0 0 0 126 653 1086 5 1304 1281 2 1346 1347 6 1008 830 t 0 0 0 0 0 0 0 435 290 85 852 40 9 76 16 4 59 193 138

ONAC127_UN0428.1_JASPAR_rc_shift9 (ONAC127:UN0428.1:JASPAR_rc) 0.512 0.426 0.931 0.853 0.785 207 169 222 206 222 205.200
; oligos_6-8nt_m4 versus ONAC127_UN0428.1_JASPAR_rc (ONAC127:UN0428.1:JASPAR_rc); m=231/241; ncol2=10; w=0; offset=2; strand=R; shift=9; score= 205.2; ---------ggGGCAGCwr ; cor=0.512; Ncor=0.426; logoDP=0.931; NsEucl=0.853; NSW=0.785; rcor=207; rNcor=169; rlogoDP=222; rNsEucl=206; rNSW=222; rank_mean=205.200; match_rank= a 0 0 0 0 0 0 0 0 0 4 2 0 0 0 20 0 0 7 5 c 0 0 0 0 0 0 0 0 0 3 4 0 0 20 0 0 20 2 3 g 0 0 0 0 0 0 0 0 0 10 11 20 20 0 0 20 0 4 11 t 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 7 1

CRF4_MA0976.2_JASPAR_rc_shift7 (CRF4:MA0976.2:JASPAR_rc) 0.404 0.404 3.533 0.861 0.769 240 225 161 170 233 205.800
; oligos_6-8nt_m4 versus CRF4_MA0976.2_JASPAR_rc (CRF4:MA0976.2:JASPAR_rc); m=232/241; ncol2=12; w=0; offset=0; strand=R; shift=7; score= 205.8; -------ygGyGGCGGCGg ; cor=0.404; Ncor=0.404; logoDP=3.533; NsEucl=0.861; NSW=0.769; rcor=240; rNcor=225; rlogoDP=161; rNsEucl=170; rNSW=233; rank_mean=205.800; match_rank= a 0 0 0 0 0 0 0 363 369 134 131 25 87 51 9 9 63 163 321 c 0 0 0 0 0 0 0 757 198 40 653 16 9 1734 15 22 1744 111 247 g 0 0 0 0 0 0 0 168 1002 1659 12 1804 1794 2 1866 1865 4 1377 1167 t 0 0 0 0 0 0 0 612 331 67 1104 55 10 113 10 4 89 249 165

At5g08330.ampDAP_M0757_AthalianaCistrome_rc_shift7 (At5g08330.ampDAP:M0757:AthalianaCistrome_rc) 0.411 0.411 2.987 0.857 0.756 238 205 190 187 236 211.200
; oligos_6-8nt_m4 versus At5g08330.ampDAP_M0757_AthalianaCistrome_rc (At5g08330.ampDAP:M0757:AthalianaCistrome_rc); m=233/241; ncol2=12; w=0; offset=0; strand=R; shift=7; score= 211.2; -------rTgGGkCCCACw ; cor=0.411; Ncor=0.411; logoDP=2.987; NsEucl=0.857; NSW=0.756; rcor=238; rNcor=205; rlogoDP=190; rNsEucl=187; rNSW=236; rank_mean=211.200; match_rank= a 0 0 0 0 0 0 0 146 54 111 0 0 123 18 0 0 582 0 226 c 0 0 0 0 0 0 0 61 52 13 0 0 48 527 584 584 0 578 140 g 0 0 0 0 0 0 0 326 42 394 577 583 242 0 0 0 2 1 53 t 0 0 0 0 0 0 0 51 436 66 7 1 171 39 0 0 0 5 165

TCP15_B73_1_m1_EEAD0514_EEADannot_shift8 (TCP15_B73_1_m1:EEAD0514:EEADannot) 0.440 0.403 3.927 0.853 0.761 236 228 151 207 235 211.400
; oligos_6-8nt_m4 versus TCP15_B73_1_m1_EEAD0514_EEADannot (TCP15_B73_1_m1:EEAD0514:EEADannot); m=234/241; ncol2=11; w=0; offset=1; strand=D; shift=8; score= 211.4; --------syGGGCCCCgw ; cor=0.440; Ncor=0.403; logoDP=3.927; NsEucl=0.853; NSW=0.761; rcor=236; rNcor=228; rlogoDP=151; rNsEucl=207; rNSW=235; rank_mean=211.400; match_rank= a 0 0 0 0 0 0 0 0 12 0 1 0 14 0 0 0 0 0 36 c 0 0 0 0 0 0 0 0 47 66 0 0 0 80 100 100 100 21 1 g 0 0 0 0 0 0 0 0 41 0 99 100 85 20 0 0 0 62 23 t 0 0 0 0 0 0 0 0 0 34 0 0 1 0 0 0 0 17 40

TCP23_TCP23_ArabidopsisPBM_shift9 (TCP23:TCP23:ArabidopsisPBM) 0.481 0.401 4.044 0.838 0.739 219 236 139 240 241 215.000
; oligos_6-8nt_m4 versus TCP23_TCP23_ArabidopsisPBM (TCP23:TCP23:ArabidopsisPBM); m=235/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 215; ---------GGGGCCCACA ; cor=0.481; Ncor=0.401; logoDP=4.044; NsEucl=0.838; NSW=0.739; rcor=219; rNcor=236; rlogoDP=139; rNsEucl=240; rNSW=241; rank_mean=215.000; match_rank= a 0 0 0 0 0 0 0 0 0 2 0 1 4 1 1 1 95 1 73 c 0 0 0 0 0 0 0 0 0 5 0 1 9 97 98 98 2 96 14 g 0 0 0 0 0 0 0 0 0 77 97 98 84 1 1 0 3 1 3 t 0 0 0 0 0 0 0 0 0 16 3 0 3 1 0 1 0 2 10

TCP1_MA1284.2_JASPAR_rc_shift7 (TCP1:MA1284.2:JASPAR_rc) 0.442 0.405 3.518 0.849 0.749 233 223 162 221 239 215.600
; oligos_6-8nt_m4 versus TCP1_MA1284.2_JASPAR_rc (TCP1:MA1284.2:JASPAR_rc); m=236/241; ncol2=11; w=0; offset=0; strand=R; shift=7; score= 215.6; -------gkGGGrCCCAC- ; cor=0.442; Ncor=0.405; logoDP=3.518; NsEucl=0.849; NSW=0.749; rcor=233; rNcor=223; rlogoDP=162; rNsEucl=221; rNSW=239; rank_mean=215.600; match_rank= a 0 0 0 0 0 0 0 17 9 4 0 0 25 0 0 0 84 0 0 c 0 0 0 0 0 0 0 2 8 0 0 1 8 95 95 95 5 84 0 g 0 0 0 0 0 0 0 61 26 82 95 94 54 0 0 0 6 7 0 t 0 0 0 0 0 0 0 15 52 9 0 0 8 0 0 0 0 4 0

TCP15_TCP15_ArabidopsisPBM_shift9 (TCP15:TCP15:ArabidopsisPBM) 0.482 0.401 3.947 0.841 0.746 218 234 149 238 240 215.800
; oligos_6-8nt_m4 versus TCP15_TCP15_ArabidopsisPBM (TCP15:TCP15:ArabidopsisPBM); m=237/241; ncol2=10; w=0; offset=2; strand=D; shift=9; score= 215.8; ---------GGGGCCCACm ; cor=0.482; Ncor=0.401; logoDP=3.947; NsEucl=0.841; NSW=0.746; rcor=218; rNcor=234; rlogoDP=149; rNsEucl=238; rNSW=240; rank_mean=215.800; match_rank= a 0 0 0 0 0 0 0 0 0 1 1 0 6 1 0 0 95 1 27 c 0 0 0 0 0 0 0 0 0 5 0 0 14 95 99 99 1 96 45 g 0 0 0 0 0 0 0 0 0 81 98 100 77 0 0 0 4 2 12 t 0 0 0 0 0 0 0 0 0 13 1 0 3 4 1 1 0 1 16

ASIL2_MA2039.2_JASPAR_rc_shift10 (ASIL2:MA2039.2:JASPAR_rc) 0.535 0.401 2.640 0.845 0.785 194 233 201 230 224 216.400
; oligos_6-8nt_m4 versus ASIL2_MA2039.2_JASPAR_rc (ASIL2:MA2039.2:JASPAR_rc); m=238/241; ncol2=9; w=0; offset=3; strand=R; shift=10; score= 216.4; ----------tCGCCGGAG ; cor=0.535; Ncor=0.401; logoDP=2.640; NsEucl=0.845; NSW=0.785; rcor=194; rNcor=233; rlogoDP=201; rNsEucl=230; rNSW=224; rank_mean=216.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 174 40 134 31 1 2 6 1168 244 c 0 0 0 0 0 0 0 0 0 0 228 1217 7 1244 1382 0 14 147 33 g 0 0 0 0 0 0 0 0 0 0 144 59 1233 61 2 1391 1367 10 1089 t 0 0 0 0 0 0 0 0 0 0 853 83 25 63 14 6 12 74 33

Zm00001d020595_MA1821.1_JASPAR_rc_shift7 (Zm00001d020595:MA1821.1:JASPAR_rc) 0.455 0.417 1.570 0.851 0.754 228 187 214 216 237 216.400
; oligos_6-8nt_m4 versus Zm00001d020595_MA1821.1_JASPAR_rc (Zm00001d020595:MA1821.1:JASPAR_rc); m=239/241; ncol2=11; w=0; offset=0; strand=R; shift=7; score= 216.4; -------ccGCCGCCGcc- ; cor=0.455; Ncor=0.417; logoDP=1.570; NsEucl=0.851; NSW=0.754; rcor=228; rNcor=187; rlogoDP=214; rNsEucl=216; rNSW=237; rank_mean=216.400; match_rank= a 0 0 0 0 0 0 0 774 707 5 0 0 1 2 0 0 676 869 0 c 0 0 0 0 0 0 0 3732 4405 3 7064 7064 1 7061 7064 0 4239 3902 0 g 0 0 0 0 0 0 0 1448 1193 7056 0 0 7062 0 0 7064 1187 1437 0 t 0 0 0 0 0 0 0 1110 759 0 0 0 0 1 0 0 962 856 0

TCP20.ampDAP_M0759_AthalianaCistrome_shift7 (TCP20.ampDAP:M0759:AthalianaCistrome) 0.401 0.401 3.483 0.856 0.752 241 239 167 197 238 216.400
; oligos_6-8nt_m4 versus TCP20.ampDAP_M0759_AthalianaCistrome (TCP20.ampDAP:M0759:AthalianaCistrome); m=240/241; ncol2=12; w=0; offset=0; strand=D; shift=7; score= 216.4; -------gTGGGkCCCACm ; cor=0.401; Ncor=0.401; logoDP=3.483; NsEucl=0.856; NSW=0.752; rcor=241; rNcor=239; rlogoDP=167; rNsEucl=197; rNSW=238; rank_mean=216.400; match_rank= a 0 0 0 0 0 0 0 130 37 87 2 0 121 16 0 0 542 0 174 c 0 0 0 0 0 0 0 63 69 12 1 0 53 485 542 542 0 534 178 g 0 0 0 0 0 0 0 302 30 389 533 542 191 3 0 0 0 0 60 t 0 0 0 0 0 0 0 47 406 54 6 0 177 38 0 0 0 8 130

ENAP2_MA2040.2_JASPAR_rc_shift10 (ENAP2:MA2040.2:JASPAR_rc) 0.534 0.401 2.576 0.845 0.785 195 238 203 229 223 217.600
; oligos_6-8nt_m4 versus ENAP2_MA2040.2_JASPAR_rc (ENAP2:MA2040.2:JASPAR_rc); m=241/241; ncol2=9; w=0; offset=3; strand=R; shift=10; score= 217.6; ----------tCGCCGGAG ; cor=0.534; Ncor=0.401; logoDP=2.576; NsEucl=0.845; NSW=0.785; rcor=195; rNcor=238; rlogoDP=203; rNsEucl=229; rNSW=223; rank_mean=217.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 299 65 191 57 4 8 15 1797 351 c 0 0 0 0 0 0 0 0 0 0 428 2037 10 2017 2281 0 15 328 43 g 0 0 0 0 0 0 0 0 0 0 208 68 2038 119 0 2283 2244 13 1863 t 0 0 0 0 0 0 0 0 0 0 1363 128 59 105 13 7 24 160 41