; matrix-scan  -v 1 -matrix_format transfac -m $RSAT/public_html/tmp/www-data/2026/05/29/matrix-scan_2026-05-29.170225_CDptNV.matrix -pseudo 1 -decimals 1 -2str -origin end -bginput -markov 1 -bg_pseudo 0.01 -return limits -return sites -return pval -return rank -lth score 1 -uth pval 1e-3 -i $RSAT/public_html/tmp/www-data/2026/05/29/tmp_sequence_2026-05-29.170225_bw8vId.fasta -seq_format fasta -n score
; Slow counting mode            
; Input files
;	input	$RSAT/public_html/tmp/www-data/2026/05/29/tmp_sequence_2026-05-29.170225_bw8vId.fasta
; Matrix files
;	matrix 1	$RSAT/public_html/tmp/www-data/2026/05/29/matrix-scan_2026-05-29.170225_CDptNV.matrix
; Sequence format      	fasta
; Pseudo counts        	1
; Background model
;	Method        	input
;	Markov order  	1
;	Strand        	undef
;	Background pseudo-frequency	0.01
;	Residue probabilities
;		a	0.34464
;		c	0.18339
;		g	0.14842
;		t	0.32356
; Thresholds	lower	upper
;	pval  	NA	0.001
;	score 	1    	NA
; Output columns
;	1	seq_id
;	2	ft_type
;	3	ft_name
;	4	strand
;	5	start
;	6	end
;	7	sequence
;	8	weight
#seq_id	ft_type	ft_name	strand	start	end	sequence	weight	Pval	ln_Pval	sig	rank	rank_pm
BVRB_3g059400|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_3g059400	limit	START_END	D	-455	-1	.	0	0	0	0
BVRB_3g059400|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_3g059400	site	oligos_6-8nt_m1	D	-412	-397	NNNNNNNCCNNNNNNN	3.0	7.7e-04	-7.169	3.113	1	1
BVRB_3g059400|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_3g059400	site	oligos_6-8nt_m1	D	-407	-392	NNCCNNNNNNNNNNNN	2.8	8.7e-04	-7.045	3.060	2	2
BVRB_3g059400|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_3g059400	site	oligos_6-8nt_m1	D	-408	-393	NNNCCNNNNNNNNNNN	2.7	9.2e-04	-6.990	3.036	3	3
BVRB_3g059400|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_3g059400	site	oligos_6-8nt_m1	R	-274	-259	GTGCNNNNNNNNNNNN	2.6	9.8e-04	-6.929	3.009	4	4
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	limit	START_END	D	-1701	-1	.	0	0	0	0
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	D	-1527	-1512	GGTCCGACCNNNNNNN	7.6	3.0e-05	-10.399	4.516	1	1
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	R	-792	-777	GTCCGGCACCGTCACT	7.1	4.5e-05	-10.007	4.346	2	2
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	D	-593	-578	TGGTCGTCACGGTCAG	6.1	9.5e-05	-9.260	4.022	3	3
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	D	-247	-232	TCCCCGGCCCAGGGCA	6.0	1.0e-04	-9.180	3.987	4	4
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	D	-1532	-1517	TTCACGGTCCGACCNN	5.6	1.4e-04	-8.901	3.866	5	5
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	D	-588	-573	GTCACGGTCAGTCCGT	5.5	1.5e-04	-8.823	3.832	6	6
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	R	-1635	-1620	GTTCCTTCNNNNNNNN	4.5	2.9e-04	-8.132	3.532	7	7
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	R	-594	-579	TGACCGTGACGACCAG	4.1	3.8e-04	-7.874	3.419	8	8
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	R	-248	-233	GCCCTGGGCCGGGGAT	3.8	4.7e-04	-7.673	3.332	9	9
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	D	-1526	-1511	GTCCGACCNNNNNNNN	3.1	7.2e-04	-7.237	3.143	10	10
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	R	-417	-402	CTNNNNNNNNGTTCCT	3.1	7.2e-04	-7.237	3.143	11	11
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	D	-610	-595	GCCTCTTCTCAGTCGG	3.0	7.7e-04	-7.169	3.113	12	12
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	R	-304	-289	GCCACTGTCTGTCGCC	2.9	8.2e-04	-7.107	3.086	13	13
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	R	-1630	-1615	ATCATGTTCCTTCNNN	2.8	8.7e-04	-7.045	3.060	14	14
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	R	-566	-551	GCTCCGACGCACCACT	2.7	9.2e-04	-6.990	3.036	15	15
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	oligos_6-8nt_m1	R	-309	-294	TGTCTGTCGCCTGTCG	2.5	1.0e-03	-6.863	2.981	16	16
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	limit	START_END	D	-1701	-1	.	0	0	0	0
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	site	oligos_6-8nt_m1	D	-173	-158	GTTCTGTCCCACCTCA	8.2	1.9e-05	-10.874	4.723	1	1
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	site	oligos_6-8nt_m1	D	-23	-8	GGCCCGGCCCACTATG	8.1	2.1e-05	-10.793	4.688	2	2
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	site	oligos_6-8nt_m1	D	-178	-163	TTTCAGTTCTGTCCCA	5.4	1.6e-04	-8.759	3.804	3	3
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	site	oligos_6-8nt_m1	D	-841	-826	TTCGCGTGCTATCTAT	4.3	3.3e-04	-8.005	3.477	4	4
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	site	oligos_6-8nt_m1	D	-18	-3	GGCCCACTATGTGCGG	4.1	3.8e-04	-7.874	3.419	5	5
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	site	oligos_6-8nt_m1	D	-1586	-1571	TGCTCTTCTCGATCCA	3.0	7.7e-04	-7.169	3.113	6	6
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	site	oligos_6-8nt_m1	R	-30	-15	GGCCGGGCCCTATTAA	3.0	7.7e-04	-7.169	3.113	7	7
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	site	oligos_6-8nt_m1	R	-504	-489	CTCTCTTCTCATCCAT	2.9	8.2e-04	-7.107	3.086	8	8
T459_31204|Capsicum_annuum.ASM51225v2.60|T459_31204	limit	START_END	D	-1701	-1	.	0	0	0	0
T459_31204|Capsicum_annuum.ASM51225v2.60|T459_31204	site	oligos_6-8nt_m1	R	-356	-341	TGCCTGCNNNNNNNNN	3.0	7.7e-04	-7.169	3.113	1	1
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	limit	START_END	D	-1701	-1	.	0	0	0	0
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m1	R	-1274	-1259	NNNNNNNNNCGGCCAG	5.3	1.7e-04	-8.689	3.774	1	1
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m1	D	-1272	-1257	GGCCGNNNNNNNNNNN	4.6	2.7e-04	-8.206	3.564	2	2
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m1	D	-1273	-1258	TGGCCGNNNNNNNNNN	4.4	3.1e-04	-8.072	3.506	3	3
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m1	D	-1637	-1622	ACCACTACCCATCCAT	3.7	4.9e-04	-7.615	3.307	4	4
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m1	D	-1277	-1262	TGGCTGGCCGNNNNNN	3.5	5.6e-04	-7.482	3.249	5	5
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m1	D	-267	-252	GGCTCGAAGCATGCCG	3.4	6.0e-04	-7.418	3.222	6	6
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m1	D	-256	-241	TGCCGCTGATGTTCCG	2.9	8.2e-04	-7.107	3.086	7	7
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m1	R	-1269	-1254	NNNNNNNNNNNNNNCG	2.7	9.2e-04	-6.990	3.036	8	8
Cla97C08G153070|Citrullus_lanatus.Cla97_v1.62|Cla97C08G153070	limit	START_END	D	-1701	-1	.	0	0	0	0
Cla97C08G153070|Citrullus_lanatus.Cla97_v1.62|Cla97C08G153070	site	oligos_6-8nt_m1	D	-710	-695	GTCCTNNNNNNNNNNN	3.9	4.4e-04	-7.737	3.360	1	1
Cla97C08G153070|Citrullus_lanatus.Cla97_v1.62|Cla97C08G153070	site	oligos_6-8nt_m1	D	-187	-172	TGCTACTCCCGCTCAG	3.9	4.4e-04	-7.737	3.360	2	2
Cla97C08G153070|Citrullus_lanatus.Cla97_v1.62|Cla97C08G153070	site	oligos_6-8nt_m1	R	-847	-832	GTCCTTTNNNNNNNNN	3.4	6.0e-04	-7.418	3.222	3	3
Cla97C08G153070|Citrullus_lanatus.Cla97_v1.62|Cla97C08G153070	site	oligos_6-8nt_m1	D	-1476	-1461	GTCNNNNNNNNNNNNN	3.2	6.8e-04	-7.299	3.170	4	4
Cla97C08G153070|Citrullus_lanatus.Cla97_v1.62|Cla97C08G153070	site	oligos_6-8nt_m1	R	-294	-279	TGCCTNNNNNNNNNNN	2.7	9.2e-04	-6.990	3.036	5	5
Cla97C08G153070|Citrullus_lanatus.Cla97_v1.62|Cla97C08G153070	site	oligos_6-8nt_m1	D	-711	-696	GGTCCTNNNNNNNNNN	2.5	1.0e-03	-6.863	2.981	6	6
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	limit	START_END	D	-1701	-1	.	0	0	0	0
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	oligos_6-8nt_m1	D	-74	-59	TTGCTGCTCCGGCTCA	4.2	3.6e-04	-7.933	3.445	1	1
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	oligos_6-8nt_m1	R	-206	-191	TGCCNNNNNNNNNNNN	3.3	6.4e-04	-7.362	3.197	2	2
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	oligos_6-8nt_m1	R	-207	-192	GCCNNNNNNNNNNNNN	2.7	9.2e-04	-6.990	3.036	3	3
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	oligos_6-8nt_m1	D	-69	-54	GCTCCGGCTCAGGGCT	2.7	9.2e-04	-6.990	3.036	4	4
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	oligos_6-8nt_m1	R	-70	-55	GCCCTGAGCCGGAGCA	2.6	9.8e-04	-6.929	3.009	5	5
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	oligos_6-8nt_m1	D	-890	-875	GGCTTGATTCGTGCTT	2.5	1.0e-03	-6.863	2.981	6	6
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	limit	START_END	D	-1701	-1	.	0	0	0	0
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	site	oligos_6-8nt_m1	D	-83	-68	TTGCTGCTCCGGCTCA	4.2	3.6e-04	-7.933	3.445	1	1
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	site	oligos_6-8nt_m1	D	-616	-601	GGCTTGATTCGTGCTT	2.5	1.0e-03	-6.863	2.981	2	2
HanXRQr2_Chr13g0574171|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr13g0574171	limit	START_END	D	-1701	-1	.	0	0	0	0
HanXRQr2_Chr13g0574171|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr13g0574171	site	oligos_6-8nt_m1	D	-372	-357	GGCCATTCTCATGCAT	4.0	4.1e-04	-7.802	3.388	1	1
HanXRQr2_Chr13g0574171|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr13g0574171	site	oligos_6-8nt_m1	D	-271	-256	GGCCATTCTCATGCAT	4.0	4.1e-04	-7.802	3.388	2	2
HanXRQr2_Chr13g0574181|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr13g0574181	limit	START_END	D	-1701	-1	.	0	0	0	0
HanXRQr2_Chr13g0574181|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr13g0574181	site	oligos_6-8nt_m1	R	-168	-153	TGCAGGCCCCTTTGAG	2.7	9.2e-04	-6.990	3.036	1	1
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	limit	START_END	D	-1701	-1	.	0	0	0	0
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	oligos_6-8nt_m1	D	-1096	-1081	TTACCATCACGACCCT	3.0	7.7e-04	-7.169	3.113	1	1
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	oligos_6-8nt_m1	D	-1660	-1645	NNNNNGTTCNNNNNNN	2.7	9.2e-04	-6.990	3.036	2	2
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	oligos_6-8nt_m1	D	-1239	-1224	NNNNNNNNNNNNNNCG	2.7	9.2e-04	-6.990	3.036	3	3
gene25542|Medicago_truncatula.MtrunA17r50ANR.60|gene25542	limit	START_END	D	-1701	-1	.	0	0	0	0
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	limit	START_END	D	-1701	-1	.	0	0	0	0
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	R	-330	-315	GGCCTGTCTCATGCCT	10.0	4.0e-06	-12.417	5.393	1	1
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	D	-576	-561	GGCCCGATCCATTACG	9.4	6.9e-06	-11.884	5.161	2	2
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	R	-325	-310	TGCTCGGCCTGTCTCA	8.9	1.1e-05	-11.458	4.976	3	3
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	D	-1313	-1298	TTCCCGAGACGTCCAC	8.0	2.2e-05	-10.712	4.652	4	4
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	D	-236	-221	GTCCAGTCCTCCCTCG	6.1	9.5e-05	-9.260	4.022	5	5
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	D	-715	-700	TCTCCGATCGGTTACG	4.3	3.3e-04	-8.005	3.477	6	6
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	R	-567	-552	GGTCGGTCTCGTAATG	3.4	6.0e-04	-7.418	3.222	7	7
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	D	-553	-538	CCCCCGACGCGATCCC	3.3	6.4e-04	-7.362	3.197	8	8
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	R	-348	-333	TTCCCATGCTTTTTCG	3.2	6.8e-04	-7.299	3.170	9	9
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	R	-519	-504	GGCTTGCCCGATTTTG	3.0	7.7e-04	-7.169	3.113	10	10
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	D	-1654	-1639	GGCGGGGTCGGTTCTC	2.9	8.2e-04	-7.107	3.086	11	11
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	R	-1615	-1600	GGTCGAACCTGTACAG	2.9	8.2e-04	-7.107	3.086	12	12
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	R	-562	-547	TCGGGGGTCGGTCTCG	2.8	8.7e-04	-7.045	3.060	13	13
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	D	-329	-314	GGCATGAGACAGGCCG	2.8	8.7e-04	-7.045	3.060	14	14
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	D	-1318	-1303	TCCGTTTCCCGAGACG	2.7	9.2e-04	-6.990	3.036	15	15
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	R	-556	-541	ATCGCGTCGGGGGTCG	2.7	9.2e-04	-6.990	3.036	16	16
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	D	-275	-260	GGGCGTTCCAAGCCCA	2.7	9.2e-04	-6.990	3.036	17	17
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	R	-1309	-1294	GCACGTGGACGTCTCG	2.6	9.8e-04	-6.929	3.009	18	18
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m1	D	-580	-565	ATCTGGCCCGATCCAT	2.6	9.8e-04	-6.929	3.009	19	19
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	limit	START_END	D	-1701	-1	.	0	0	0	0
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	oligos_6-8nt_m1	D	-1125	-1110	GCTCCAGCCCGCCCCG	12.0	6.2e-07	-14.298	6.210	1	1
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	oligos_6-8nt_m1	D	-1120	-1105	AGCCCGCCCCGTCTGT	11.2	1.3e-06	-13.516	5.870	2	2
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	oligos_6-8nt_m1	R	-170	-155	GGCCTGCCCCATGCTG	10.2	3.4e-06	-12.590	5.468	3	3
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	oligos_6-8nt_m1	R	-145	-130	GGCATGTCCTATGCCT	8.0	2.2e-05	-10.712	4.652	4	4
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	oligos_6-8nt_m1	R	-165	-150	TTTTCGGCCTGCCCCA	5.8	1.2e-04	-9.036	3.924	5	5
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	oligos_6-8nt_m1	R	-140	-125	TGCTTGGCATGTCCTA	3.2	6.8e-04	-7.299	3.170	6	6
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	oligos_6-8nt_m1	D	-1036	-1021	GTGCTGGCACACCTAT	3.1	7.2e-04	-7.237	3.143	7	7
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	limit	START_END	D	-1701	-1	.	0	0	0	0
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1511	-1496	GTCCCGTCCCATCCCG	18.3	2.9e-10	-21.963	9.538	1	1
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1363	-1348	GGGCCGTCCCGTCCCA	17.1	1.7e-09	-20.213	8.779	2	2
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1385	-1370	TCCCGGTCCCGTCCCG	16.7	2.8e-09	-19.691	8.552	3	3
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1368	-1353	GTCCCGTCCCATTCCG	16.6	3.3e-09	-19.532	8.482	4	4
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1390	-1375	GTCCCGTCCCGCGTCG	16.5	3.7e-09	-19.426	8.436	5	5
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1526	-1511	GTCATGTCCCGTCCCG	16.0	6.8e-09	-18.799	8.164	6	6
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1407	-1392	GTTCCGTCCCGTCCTG	15.9	7.7e-09	-18.685	8.115	7	7
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-1357	-1342	GGGACGGCCCGTCCCG	15.2	1.8e-08	-17.833	7.745	8	8
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-276	-261	GGCCTGTCCCATGCCG	15.1	2.1e-08	-17.701	7.688	9	9
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1531	-1516	GTCCCGTCCCGCCTAT	14.2	6.1e-08	-16.618	7.217	10	10
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1402	-1387	GTCGTGTTCCGTCCCG	13.6	1.2e-07	-15.962	6.932	11	11
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-1352	-1337	GGCCCGTCCCGTTGGA	13.3	1.6e-07	-15.665	6.803	12	12
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-1445	-1430	GGCCCATCCCGTTTAG	12.8	2.7e-07	-15.126	6.569	13	13
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1521	-1506	ATCCCGTCATGTCCCG	12.4	4.1e-07	-14.712	6.389	14	14
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1412	-1397	GTCCCGTCCTGTTTCA	12.3	4.5e-07	-14.605	6.343	15	15
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1358	-1343	GGGACGGGCCGTCCCG	12.3	4.5e-07	-14.605	6.343	16	16
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1516	-1501	GTCCCATCCCGTCATG	11.7	8.4e-07	-13.995	6.078	17	17
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1379	-1364	TTCCGGTCCCGGTCCC	10.8	2.0e-06	-13.143	5.708	18	18
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-251	-236	GGCATGTCCCATGCCT	10.4	2.8e-06	-12.782	5.551	19	19
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1506	-1491	CGTTTGTCCCGTCCCA	9.4	6.9e-06	-11.884	5.161	20	20
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1374	-1359	TCCCATTCCGGTCCCG	9.3	7.5e-06	-11.798	5.124	21	21
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1373	-1358	GTCCCATTCCGGTCCC	8.4	1.6e-05	-11.045	4.797	22	22
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1417	-1402	GTCCTGTTTCATTCCG	8.2	1.9e-05	-10.874	4.723	23	23
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1492	-1477	TGGCCATTTCGTCCCG	8.1	2.1e-05	-10.793	4.688	24	24
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-1300	-1285	TCTCCGATCCGTCCAT	8.1	2.1e-05	-10.793	4.688	25	25
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-246	-231	TGCTCGGCATGTCCCA	7.7	2.8e-05	-10.471	4.547	26	26
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1422	-1407	GTTTCATTCCGTCCCA	7.6	3.0e-05	-10.399	4.516	27	27
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-1362	-1347	GGGACGGGACGGCCCG	7.4	3.6e-05	-10.241	4.448	28	28
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-339	-324	GCCCCTTCTCTTCCAT	6.6	6.6e-05	-9.628	4.181	29	29
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1397	-1382	CCCGCGTCGTGTTCCG	6.2	8.9e-05	-9.326	4.050	30	30
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1497	-1482	ATTTCGTCCCGTTTGT	5.9	1.1e-04	-9.115	3.959	31	31
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1380	-1365	TCCGGTCCCGGTCCCG	5.9	1.1e-04	-9.115	3.959	32	32
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1384	-1369	GTCCCGGTCCCGTCCC	5.4	1.6e-04	-8.759	3.804	33	33
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-250	-235	GGCATGGGACATGCCG	5.3	1.7e-04	-8.689	3.774	34	34
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1395	-1380	GTCCCGCGTCGTGTTC	5.0	2.1e-04	-8.473	3.680	35	35
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1540	-1525	CGCCTATCCCACGTCC	4.5	2.9e-04	-8.132	3.532	36	36
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1427	-1412	ATTCCGTCCCACTTAA	4.5	2.9e-04	-8.132	3.532	37	37
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-1482	-1467	TGGCCATACCTTCCCA	4.0	4.1e-04	-7.802	3.388	38	38
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-1472	-1457	TTCCCATCTTGTGTCC	3.9	4.4e-04	-7.737	3.360	39	39
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-1450	-1435	ACATGGGCCCATCCCG	3.9	4.4e-04	-7.737	3.360	40	40
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-1477	-1462	ATACCTTCCCATCTTG	3.5	5.6e-04	-7.482	3.249	41	41
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1535	-1520	CGTCCCGCCTATCCCA	3.1	7.2e-04	-7.237	3.143	42	42
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1502	-1487	GTCCCGTTTGTCCCGT	3.0	7.7e-04	-7.169	3.113	43	43
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-275	-260	GGCATGGGACAGGCCG	2.9	8.2e-04	-7.107	3.086	44	44
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-271	-256	AATTCGGCCTGTCCCA	2.9	8.2e-04	-7.107	3.086	45	45
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-1364	-1349	GGCCGTCCCGTCCCAT	2.6	9.8e-04	-6.929	3.009	46	46
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-1291	-1276	CGTCCATCACATGCAC	2.6	9.8e-04	-6.929	3.009	47	47
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	R	-256	-241	GTCCCATGCCTTTAAA	2.6	9.8e-04	-6.929	3.009	48	48
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m1	D	-1525	-1510	GGGACGGGACATGACG	2.5	1.0e-03	-6.863	2.981	49	49
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	limit	START_END	D	-1701	-1	.	0	0	0	0
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	oligos_6-8nt_m1	R	-314	-299	GGCCCGTCCCATGCCT	15.5	1.2e-08	-18.201	7.905	1	1
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	oligos_6-8nt_m1	R	-309	-294	TGCTCGGCCCGTCCCA	13.6	1.2e-07	-15.962	6.932	2	2
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	oligos_6-8nt_m1	R	-319	-304	GTCCCATGCCTTTACG	6.7	6.2e-05	-9.695	4.210	3	3
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	oligos_6-8nt_m1	D	-313	-298	GGCATGGGACGGGCCG	5.4	1.6e-04	-8.759	3.804	4	4
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	oligos_6-8nt_m1	D	-261	-246	GGCCGTTCCAAGCCCA	4.8	2.4e-04	-8.336	3.620	5	5
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	oligos_6-8nt_m1	D	-262	-247	CGGCCGTTCCAAGCCC	3.5	5.6e-04	-7.482	3.249	6	6
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	oligos_6-8nt_m1	D	-308	-293	GGGACGGGCCGAGCAA	3.1	7.2e-04	-7.237	3.143	7	7
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	limit	START_END	D	-1701	-1	.	0	0	0	0
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	oligos_6-8nt_m1	R	-323	-308	GCCCTGTTCGGTNNNN	7.5	3.3e-05	-10.312	4.478	1	1
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	oligos_6-8nt_m1	R	-328	-313	GTTCGGTNNNNNNNNN	4.2	3.6e-04	-7.933	3.445	2	2
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	oligos_6-8nt_m1	D	-439	-424	NNNNNNNNNNNNGCCG	3.8	4.7e-04	-7.673	3.332	3	3
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	oligos_6-8nt_m1	R	-440	-425	GGCNNNNNNNNNNNNN	3.6	5.3e-04	-7.551	3.279	4	4
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	oligos_6-8nt_m1	D	-1194	-1179	GTCNNNNNNNNNNNNN	3.2	6.8e-04	-7.299	3.170	5	5
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	oligos_6-8nt_m1	R	-1356	-1341	CTCTCTTCCNNNNNNN	3.0	7.7e-04	-7.169	3.113	6	6
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	oligos_6-8nt_m1	R	-1361	-1346	TTCCNNNNNNNNNNNN	2.8	8.7e-04	-7.045	3.060	7	7
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	oligos_6-8nt_m1	R	-322	-307	GGCCCTGTTCGGTNNN	2.6	9.8e-04	-6.929	3.009	8	8
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	oligos_6-8nt_m1	R	-202	-187	GTTTCATGCCTTTCCT	2.5	1.0e-03	-6.863	2.981	9	9
;
; Matrices
;	matrix	name           	ncol	nrow	pseudo	Wmin	Wmax	Wrange
;	1	oligos_6-8nt_m1	16	4	1	-39.400	21.500	60.900	a:0.345 c:0.183 g:0.148 t:0.324 
; Number of sequences scanned	17
; Sum of sequence lengths	27671
; N residues           	7120
; Matches per matrix
;	matrix	name           	matches	scored
;	1	oligos_6-8nt_m1	148	54832
;		TOTAL          	148	54832
; Host name	rsat
; Job started	2026-05-29.170226
; Job done	2026-05-29.170232
; Seconds	5.98
;	user	5.98
;	system	0.04
;	cuser	0.11
;	csystem	0.01