; pattern-assembly  -v 1 -subst 1 -toppat 50 -2str -max_asmb_nb 20 -i $RSAT/public_html/tmp/www-data/2026/05/29/oligo-analysis_2026-05-29.183633_LgEqgH.tab -o $RSAT/public_html/tmp/www-data/2026/05/29/oligo-analysis_2026-05-29.183633_LgEqgH.asmb
; Input file	/var/www/html/rsat/public_html/tmp/www-data/2026/05/29/oligo-analysis_2026-05-29.183633_LgEqgH.tab
; Output file	/var/www/html/rsat/public_html/tmp/www-data/2026/05/29/oligo-analysis_2026-05-29.183633_LgEqgH.asmb
; Input score column           	8
; Output score column          	0
; Strand-insensitive assembly
; Max flanking bases           	1
; Max substitutions            	1
; Min matches                  	0
; Min weight                   	0
; Max assembly size            	50
; Max assembly width           	0
; Top number of patterns       	50
; Number of input patterns     	2
;

; assembly # 1	seed: ggtgga	1 assembled patterns	length 6
;alignt	rev_cpl	score
ggtgga	tccacc	0.20
ggtgga	tccacc	0.20	best consensus

; assembly # 2	seed: caaggac	1 assembled patterns	length 7
;alignt	rev_cpl	score
caaggac	gtccttg	0.19
caaggac	gtccttg	0.19	best consensus
; Host name	rsat
; Job started	2026-05-29.183638
; Job done	2026-05-29.183638
; Seconds	0.08
;	user	0.08
;	system	0
;	cuser	0
;	csystem	0