/var/www/html/rsat/public_html/tmp/www-data/2026/05/29/peak-motifs.2026-05-29.200826_2026-05-29.200826_3Thh4P/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/05/29/peak-motifs.2026-05-29.200826_2026-05-29.200826_3Thh4P/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title pro -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/05/29/peak-motifs.2026-05-29.200826_2026-05-29.200826_3Thh4P/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/05/29/peak-motifs.2026-05-29.200826_2026-05-29.200826_3Thh4P/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/05/29/peak-motifs.2026-05-29.200826_2026-05-29.200826_3Thh4P/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	26
	Sum of sequence lengths      	19526
	Min sequence length          	0
	Max sequence length          	751
	Average sequence length      	751
	Possible positions           	19500
 Sequences:
	#	length	ID
	1	751	FBgn0002284|Prosbeta6
	2	751	FBgn0002787|Rpn8
	3	751	FBgn0010590|Prosbeta1
	4	751	FBgn0011327|Uch-L5
	5	751	FBgn0015283|Rpn10
	6	751	FBgn0017556|Prosalpha4T2
	7	751	FBgn0029745|Rpn13R
	8	751	FBgn0029812|Prosbeta2R1
	9	751	FBgn0030370|Uch-L5R
	10	751	FBgn0031442|Prosbeta4R1
	11	751	FBgn0031443|Prosbeta4R2
	12	751	FBgn0032492|Prosalpha6T
	13	751	FBgn0033886|Rpn13
	14	751	FBgn0034842|Prosbeta5R1
	15	751	FBgn0036224|Rpt4R
	16	751	FBgn0036465|Rpn12R
	17	751	FBgn0037296|Prosbeta2R2
	18	751	FBgn0037742|Rpt3R
	19	751	FBgn0039788|Rpt6R
	20	751	FBgn0050382|Prosalpha1R
	21	751	FBgn0051742|Prosbeta5R2
	22	751	FBgn0250746|Prosbeta7
	23	751	FBgn0261394|Prosalpha3
	24	751	FBgn0261395|Prosalpha3T
	25	751	FBgn0263121|Prosalpha1
	26	751	FBgn0265606|Prosalpha4T1
 Oligonucleotide statistics:
	Total occurrences    	18766
 Position interval parameters:
	Position interval    	20
	Number of windows    	38
	Total positions      	19500
	Degrees of freedom   	37
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-19	[-379,-360]	-369.5	26	416
	2	-18	[-359,-340]	-349.5	26	520
	3	-17	[-339,-320]	-329.5	26	520
	4	-16	[-319,-300]	-309.5	26	520
	5	-15	[-299,-280]	-289.5	26	520
	6	-14	[-279,-260]	-269.5	26	520
	7	-13	[-259,-240]	-249.5	26	520
	8	-12	[-239,-220]	-229.5	26	520
	9	-11	[-219,-200]	-209.5	26	520
	10	-10	[-199,-180]	-189.5	26	520
	11	-9	[-179,-160]	-169.5	26	520
	12	-8	[-159,-140]	-149.5	26	520
	13	-7	[-139,-120]	-129.5	26	520
	14	-6	[-119,-100]	-109.5	26	520
	15	-5	[-99,-80]	-89.5	26	520
	16	-4	[-79,-60]	-69.5	26	520
	17	-3	[-59,-40]	-49.5	26	520
	18	-2	[-39,-20]	-29.5	26	520
	19	-1	[-19,0]	-9.5	26	520
	20	0	[1,20]	10.5	26	520
	21	1	[21,40]	30.5	26	520
	22	2	[41,60]	50.5	26	520
	23	3	[61,80]	70.5	26	520
	24	4	[81,100]	90.5	26	520
	25	5	[101,120]	110.5	26	520
	26	6	[121,140]	130.5	26	520
	27	7	[141,160]	150.5	26	520
	28	8	[161,180]	170.5	26	520
	29	9	[181,200]	190.5	26	520
	30	10	[201,220]	210.5	26	520
	31	11	[221,240]	230.5	26	520
	32	12	[241,260]	250.5	26	520
	33	13	[261,280]	270.5	26	520
	34	14	[281,300]	290.5	26	520
	35	15	[301,320]	310.5	26	520
	36	16	[321,340]	330.5	26	520
	37	17	[341,360]	350.5	26	520
	38	18	[361,380]	370.5	26	364

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-369.5         	occurrences in window	1	[-379,-360]
	11	-349.5         	occurrences in window	2	[-359,-340]
	12	-329.5         	occurrences in window	3	[-339,-320]
	13	-309.5         	occurrences in window	4	[-319,-300]
	14	-289.5         	occurrences in window	5	[-299,-280]
	15	-269.5         	occurrences in window	6	[-279,-260]
	16	-249.5         	occurrences in window	7	[-259,-240]
	17	-229.5         	occurrences in window	8	[-239,-220]
	18	-209.5         	occurrences in window	9	[-219,-200]
	19	-189.5         	occurrences in window	10	[-199,-180]
	20	-169.5         	occurrences in window	11	[-179,-160]
	21	-149.5         	occurrences in window	12	[-159,-140]
	22	-129.5         	occurrences in window	13	[-139,-120]
	23	-109.5         	occurrences in window	14	[-119,-100]
	24	-89.5          	occurrences in window	15	[-99,-80]
	25	-69.5          	occurrences in window	16	[-79,-60]
	26	-49.5          	occurrences in window	17	[-59,-40]
	27	-29.5          	occurrences in window	18	[-39,-20]
	28	-9.5           	occurrences in window	19	[-19,0]
	29	10.5           	occurrences in window	20	[1,20]
	30	30.5           	occurrences in window	21	[21,40]
	31	50.5           	occurrences in window	22	[41,60]
	32	70.5           	occurrences in window	23	[61,80]
	33	90.5           	occurrences in window	24	[81,100]
	34	110.5          	occurrences in window	25	[101,120]
	35	130.5          	occurrences in window	26	[121,140]
	36	150.5          	occurrences in window	27	[141,160]
	37	170.5          	occurrences in window	28	[161,180]
	38	190.5          	occurrences in window	29	[181,200]
	39	210.5          	occurrences in window	30	[201,220]
	40	230.5          	occurrences in window	31	[221,240]
	41	250.5          	occurrences in window	32	[241,260]
	42	270.5          	occurrences in window	33	[261,280]
	43	290.5          	occurrences in window	34	[281,300]
	44	310.5          	occurrences in window	35	[301,320]
	45	330.5          	occurrences in window	36	[321,340]
	46	350.5          	occurrences in window	37	[341,360]
	47	370.5          	occurrences in window	38	[361,380]
seq id occ chi2 df Pval Eval sig rank -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5
aa aa 1484 231.3 37 5.8e-30 9.3e-29 28.03 1 60 64 51 71 67 64 76 60 35 31 41 54 27 31 47 44 35 27 33 29 40 29 33 31 16 22 19 24 37 32 34 36 37 23 37 25 34 28
tt tt 1330 199.4 37 3.9e-24 6.2e-23 22.21 2 49 73 48 58 64 66 57 40 36 40 34 31 39 36 36 32 26 28 25 37 26 37 23 25 33 26 25 28 26 31 20 41 19 27 20 21 25 22
gg gg 1121 111.8 37 1.9e-09 3.1e-08 7.51 3 2 17 16 16 8 14 20 26 33 35 33 22 28 27 33 33 42 36 31 30 31 30 35 37 30 45 28 33 45 38 30 34 37 25 45 36 35 25
cc cc 1088 105.0 37 2.0e-08 3.2e-07 6.50 4 18 15 15 6 15 22 18 23 28 35 27 29 34 34 30 24 29 33 40 28 32 31 27 49 33 23 41 28 28 33 27 31 26 54 33 41 28 20
ta ta 898 100.9 37 7.8e-08 1.2e-06 5.91 5 36 47 28 32 36 31 39 32 32 24 23 21 25 27 20 20 18 14 20 15 17 22 18 18 23 25 18 33 20 11 17 16 21 20 21 19 20 19
gc gc 1226 71.8 37 5.2e-04 0.0084 2.08 6 16 19 22 17 25 18 20 29 32 33 33 36 31 38 26 30 36 33 36 35 38 28 45 30 37 42 32 33 29 44 49 34 34 42 35 49 34 26
ga ga 1257 53.7 37 3.7e-02 0.59 0.23 7 17 22 19 24 19 25 28 30 36 31 46 34 33 34 42 29 32 40 29 42 28 40 36 35 39 39 49 35 38 27 33 37 36 35 37 38 38 25
cg cg 1022 52.0 37 5.2e-02 0.83 0.08 8 14 13 18 16 19 19 22 22 26 30 24 35 21 30 29 32 31 37 29 30 35 27 30 22 36 27 32 27 24 34 29 25 37 24 31 32 35 18
at at 1350 46.9 37 1.3e-01 2 -0.31 9 44 50 39 39 47 36 47 38 38 37 34 37 30 45 35 28 41 26 30 41 24 35 32 30 39 36 42 35 40 24 29 35 30 37 36 32 29 23
tg tg 1309 42.0 37 2.6e-01 4.2 -0.63 10 28 25 32 23 34 27 25 34 35 41 32 25 44 33 28 33 39 35 31 41 32 33 50 34 40 43 45 37 30 42 42 32 38 42 38 35 33 18
ac ac 1103 37.4 37 4.5e-01 7.2 -0.86 11 22 22 37 36 26 39 29 27 34 27 28 22 33 15 27 28 32 33 29 25 34 31 22 37 28 24 42 37 25 27 28 29 31 24 34 26 31 22
gt gt 973 31.2 37 7.4e-01 12 -1.07 12 24 27 34 29 29 25 22 29 24 27 20 28 30 26 24 33 24 30 25 27 25 29 29 20 30 27 17 26 22 31 25 15 31 22 21 16 34 16
ct ct 975 31.2 37 7.4e-01 12 -1.07 13 20 20 27 20 24 23 19 19 26 28 23 18 31 26 22 27 20 29 32 25 29 26 29 32 25 27 26 35 23 26 36 30 33 28 26 32 19 14
ag ag 1121 30.2 37 7.8e-01 12 -1.10 14 14 29 26 29 19 22 26 32 29 24 40 38 31 34 31 33 22 31 29 29 30 33 33 27 31 35 23 30 33 30 31 31 29 29 28 35 38 27
ca ca 1420 30.0 37 7.8e-01 13 -1.10 15 28 32 50 51 39 42 30 38 32 33 38 36 35 33 35 38 43 34 43 34 47 37 32 45 30 34 38 35 43 40 42 42 26 42 36 36 41 30
tc tc 1089 28.9 37 8.3e-01 13 -1.12 16 24 25 38 33 29 27 22 21 24 24 24 34 28 31 35 36 30 34 38 32 32 32 26 28 30 25 23 24 37 30 28 32 35 26 22 27 26 17 
 Host name	rsat
 Job started	2026-05-29.200829
 Job done	2026-05-29.200829
 Seconds	0.24
	user	0.24
	system	0.02
	cuser	0.01
;	csystem	0