; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2026/06/02/oligo-analysis_2026-06-02.224821_AMq79K_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2026/06/02/oligo-analysis_2026-06-02.224821_AMq79K_pssm_count_matrices.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2026/06/02/oligo-analysis_2026-06-02.224821_AMq79K_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2026/06/02/oligo-analysis_2026-06-02.224821_AMq79K_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 2 4 4 0 1 1 0 14 0 1 0 0 2 15 6 3 6 3
c 7 3 4 17 0 12 17 0 13 15 0 1 6 0 1 10 2 5
g 6 0 9 0 2 2 0 0 3 0 1 15 8 1 7 3 2 7
t 2 10 0 0 14 2 0 3 1 1 16 1 1 1 3 1 7 2
//
a 10 4 0 22 1 0 30 0 0 2 10 7
c 4 9 7 3 26 30 0 28 0 2 10 5
g 8 3 23 3 1 0 0 1 29 23 4 14
t 8 14 0 2 2 0 0 1 1 3 6 4
//
a 25 11 56 4 3 68 5 1 63 15 15
c 21 28 7 5 67 0 4 69 3 23 25
g 12 20 8 62 2 0 6 2 3 15 20
t 14 13 1 1 0 4 57 0 3 19 12
//
a 3 7 1 4 0 0 0 19 0 2 17 1 2 8 4 3
c 5 3 2 11 1 14 19 0 0 0 1 2 5 9 5 8
g 8 3 17 5 1 6 2 0 21 19 0 17 12 0 6 8
t 5 8 1 1 19 1 0 2 0 0 3 1 2 4 6 2
//
a 10 15 3 1 3 56 1 2 2 17 15
c 20 17 47 2 3 0 3 50 9 13 15
g 12 15 6 55 52 1 2 6 46 16 16
t 17 12 3 1 1 2 53 1 2 13 13
//
a 1 3 1 0 0 2 0 1 12 1 0 4 2
c 0 5 1 2 11 0 0 0 0 1 12 1 3
g 8 2 0 9 1 0 11 11 0 10 0 2 4
t 3 2 10 1 0 10 1 0 0 0 0 5 3
//
a 0 1 1 4 1 1 0 1 13 2 1 2 0 1 10 3 1 8 4
c 10 6 2 11 14 0 11 15 0 13 15 1 1 4 2 3 12 3 5
g 1 7 4 1 0 1 4 0 1 0 0 0 14 10 2 9 3 2 5
t 5 2 9 0 1 14 1 0 2 1 0 13 1 1 2 1 0 3 2
//
a 2 5 18 0 0 18 0 0 6 2
c 11 7 0 0 0 0 18 18 2 6
g 4 4 0 0 18 0 0 0 5 5
t 1 2 0 18 0 0 0 0 5 5
//
a 3 0 2 0 1 0 7 2 1 6 0 0 4 1 1 0 1 4
c 2 5 3 0 2 7 0 5 7 0 0 1 1 0 1 8 5 2
g 1 2 2 6 3 0 0 0 0 1 8 7 0 6 6 0 1 2
t 2 1 1 2 2 1 1 1 0 1 0 0 3 1 0 0 1 0
//
a 1 0 1 1 0 3 1 0 2 0 1 10 7 2 2
c 4 6 0 10 11 0 12 13 0 1 1 0 2 5 1
g 4 4 9 1 2 0 0 0 0 12 11 1 2 5 4
t 4 3 3 1 0 10 0 0 11 0 0 2 2 1 6
//
a 2 6 0 0 0 0 0 20 5 1
c 13 0 20 20 0 0 20 0 4 11
g 4 5 0 0 0 20 0 0 3 3
t 1 9 0 0 20 0 0 0 8 5
//
a 4 2 2 1 12 0 0 1 12 0 0 11 0 1 2 2 6
c 5 3 11 4 0 1 9 10 0 0 1 0 2 2 10 5 2
g 4 5 1 9 1 0 5 2 2 14 13 0 10 9 1 4 2
t 1 4 0 0 1 13 0 1 0 0 0 3 2 2 1 3 4
//
a 17 13 48 1 1 7 2 2 47 19 14
c 24 16 2 57 0 2 5 4 4 15 19
g 9 16 5 0 58 50 0 54 7 20 16
t 11 16 6 3 2 2 54 1 3 7 12
//
a 20 12 6 0 61 4 2 5 59 21 16
c 20 12 7 62 2 54 63 2 5 14 9
g 18 22 1 5 2 5 2 61 2 21 18
t 10 22 54 1 3 5 1 0 2 12 25
//
a 4 3 0 16 16 0 0 0 7 5
c 4 3 16 0 0 0 0 0 6 3
g 2 5 0 0 0 16 16 16 0 3
t 6 5 0 0 0 0 0 0 3 5
//
a 4 5 0 19 0 0 0 19 2 8
c 3 9 19 0 0 0 0 0 4 4
g 8 2 0 0 0 19 19 0 4 5
t 4 3 0 0 19 0 0 0 9 2
//
a 6 3 3 3 1 20 1 1 0 0 1 19 5 2 9 3
c 9 10 3 18 19 0 21 21 1 1 6 0 0 15 4 8
g 5 6 10 1 2 1 0 1 0 23 16 0 16 3 6 9
t 4 5 8 2 2 3 2 1 23 0 1 5 3 4 5 4
//
a 6 3 20 0 0 0 0 0 7 3
c 9 7 0 0 20 0 20 20 3 4
g 3 7 0 0 0 20 0 0 4 4
t 2 3 0 20 0 0 0 0 6 9
//
a 9 11 2 0 0 30 0 2 0 5 4 9
c 8 8 27 2 1 2 2 31 32 0 11 8
g 8 11 0 32 31 2 2 1 2 27 8 8
t 9 4 5 0 2 0 30 0 0 2 11 9
//
a 14 5 24 4 1 1 7 1 2 25 2 3 12 4
c 5 5 5 0 29 27 0 2 1 3 2 28 7 11
g 7 16 2 2 2 5 1 29 29 1 26 2 4 13
t 7 7 2 27 1 0 25 1 1 4 3 0 10 5
//
; Host name rsat
; Job started 2026-06-02.224831
; Job done 2026-06-02.224831
; Seconds 0.16
; user 0.16
; system 0.02
; cuser 0
; csystem 0