; oligo-analysis  -v 1 -sort -i $RSAT/public_html/tmp/www-data/2026/06/05/retrieve-seq_2026-06-05.093815_h3YG9b.fasta.fasta.purged -format fasta -return occ -table -2str -noov -quick_if_possible -seqtype dna -bg upstream-noorf -org Vitis_vinifera.PN40024.v4.60 -pseudo 0.01 -l 6 -o $RSAT/public_html/tmp/www-data/2026/06/05/oligo-analysis_2026-06-05.093851_U5oRg8_6nt.tab
; Citation: van Helden et al. (1998). J Mol Biol 281(5), 827-42. 
; Program version              	1.169
; Slow counting mode           
; Oligomer length              	6
; Input file                   	$RSAT/public_html/tmp/www-data/2026/06/05/retrieve-seq_2026-06-05.093815_h3YG9b.fasta.fasta.purged
; Input format                 	fasta
; Output file                  	$RSAT/public_html/tmp/www-data/2026/06/05/oligo-analysis_2026-06-05.093851_U5oRg8_6nt.tab
; Discard overlapping matches
; Counted on both strands
; 	grouped by pairs of reverse complements
; Number of output patterns	2080
# seq	aaaaaa|tttttt	aaaaac|gttttt	aaaaag|cttttt	aaaaat|attttt	aaaaca|tgtttt	aaaacc|ggtttt	aaaacg|cgtttt	aaaact|agtttt	aaaaga|tctttt	aaaagc|gctttt	aaaagg|cctttt	aaaagt|actttt	aaaata|tatttt	aaaatc|gatttt	aaaatg|catttt	aaaatt|aatttt	aaacaa|ttgttt	aaacac|gtgttt	aaacag|ctgttt	aaacat|atgttt	aaacca|tggttt	aaaccc|gggttt	aaaccg|cggttt	aaacct|aggttt	aaacga|tcgttt	aaacgc|gcgttt	aaacgg|ccgttt	aaacgt|acgttt	aaacta|tagttt	aaactc|gagttt	aaactg|cagttt	aaactt|aagttt	aaagaa|ttcttt	aaagac|gtcttt	aaagag|ctcttt	aaagat|atcttt	aaagca|tgcttt	aaagcc|ggcttt	aaagcg|cgcttt	aaagct|agcttt	aaagga|tccttt	aaaggc|gccttt	aaaggg|cccttt	aaaggt|accttt	aaagta|tacttt	aaagtc|gacttt	aaagtg|cacttt	aaagtt|aacttt	aaataa|ttattt	aaatac|gtattt	aaatag|ctattt	aaatat|atattt	aaatca|tgattt	aaatcc|ggattt	aaatcg|cgattt	aaatct|agattt	aaatga|tcattt	aaatgc|gcattt	aaatgg|ccattt	aaatgt|acattt	aaatta|taattt	aaattc|gaattt	aaattg|caattt	aaattt|aaattt	aacaaa|tttgtt	aacaac|gttgtt	aacaag|cttgtt	aacaat|attgtt	aacaca|tgtgtt	aacacc|ggtgtt	aacacg|cgtgtt	aacact|agtgtt	aacaga|tctgtt	aacagc|gctgtt	aacagg|cctgtt	aacagt|actgtt	aacata|tatgtt	aacatc|gatgtt	aacatg|catgtt	aacatt|aatgtt	aaccaa|ttggtt	aaccac|gtggtt	aaccag|ctggtt	aaccat|atggtt	aaccca|tgggtt	aacccc|ggggtt	aacccg|cgggtt	aaccct|agggtt	aaccga|tcggtt	aaccgc|gcggtt	aaccgg|ccggtt	aaccgt|acggtt	aaccta|taggtt	aacctc|gaggtt	aacctg|caggtt	aacctt|aaggtt	aacgaa|ttcgtt	aacgac|gtcgtt	aacgag|ctcgtt	aacgat|atcgtt	aacgca|tgcgtt	aacgcc|ggcgtt	aacgcg|cgcgtt	aacgct|agcgtt	aacgga|tccgtt	aacggc|gccgtt	aacggg|cccgtt	aacggt|accgtt	aacgta|tacgtt	aacgtc|gacgtt	aacgtg|cacgtt	aacgtt|aacgtt	aactaa|ttagtt	aactac|gtagtt	aactag|ctagtt	aactat|atagtt	aactca|tgagtt	aactcc|ggagtt	aactcg|cgagtt	aactct|agagtt	aactga|tcagtt	aactgc|gcagtt	aactgg|ccagtt	aactgt|acagtt	aactta|taagtt	aacttc|gaagtt	aacttg|caagtt	aagaaa|tttctt	aagaac|gttctt	aagaag|cttctt	aagaat|attctt	aagaca|tgtctt	aagacc|ggtctt	aagacg|cgtctt	aagact|agtctt	aagaga|tctctt	aagagc|gctctt	aagagg|cctctt	aagagt|actctt	aagata|tatctt	aagatc|gatctt	aagatg|catctt	aagatt|aatctt	aagcaa|ttgctt	aagcac|gtgctt	aagcag|ctgctt	aagcat|atgctt	aagcca|tggctt	aagccc|gggctt	aagccg|cggctt	aagcct|aggctt	aagcga|tcgctt	aagcgc|gcgctt	aagcgg|ccgctt	aagcgt|acgctt	aagcta|tagctt	aagctc|gagctt	aagctg|cagctt	aagctt|aagctt	aaggaa|ttcctt	aaggac|gtcctt	aaggag|ctcctt	aaggat|atcctt	aaggca|tgcctt	aaggcc|ggcctt	aaggcg|cgcctt	aaggct|agcctt	aaggga|tccctt	aagggc|gccctt	aagggg|cccctt	aagggt|accctt	aaggta|tacctt	aaggtc|gacctt	aaggtg|cacctt	aagtaa|ttactt	aagtac|gtactt	aagtag|ctactt	aagtat|atactt	aagtca|tgactt	aagtcc|ggactt	aagtcg|cgactt	aagtct|agactt	aagtga|tcactt	aagtgc|gcactt	aagtgg|ccactt	aagtgt|acactt	aagtta|taactt	aagttc|gaactt	aagttg|caactt	aataaa|tttatt	aataac|gttatt	aataag|cttatt	aataat|attatt	aataca|tgtatt	aatacc|ggtatt	aatacg|cgtatt	aatact|agtatt	aataga|tctatt	aatagc|gctatt	aatagg|cctatt	aatagt|actatt	aatata|tatatt	aatatc|gatatt	aatatg|catatt	aatatt|aatatt	aatcaa|ttgatt	aatcac|gtgatt	aatcag|ctgatt	aatcat|atgatt	aatcca|tggatt	aatccc|gggatt	aatccg|cggatt	aatcct|aggatt	aatcga|tcgatt	aatcgc|gcgatt	aatcgg|ccgatt	aatcgt|acgatt	aatcta|tagatt	aatctc|gagatt	aatctg|cagatt	aatgaa|ttcatt	aatgac|gtcatt	aatgag|ctcatt	aatgat|atcatt	aatgca|tgcatt	aatgcc|ggcatt	aatgcg|cgcatt	aatgct|agcatt	aatgga|tccatt	aatggc|gccatt	aatggg|cccatt	aatggt|accatt	aatgta|tacatt	aatgtc|gacatt	aatgtg|cacatt	aattaa|ttaatt	aattac|gtaatt	aattag|ctaatt	aattat|ataatt	aattca|tgaatt	aattcc|ggaatt	aattcg|cgaatt	aattct|agaatt	aattga|tcaatt	aattgc|gcaatt	aattgg|ccaatt	aattgt|acaatt	aattta|taaatt	aatttc|gaaatt	aatttg|caaatt	acaaaa|ttttgt	acaaac|gtttgt	acaaag|ctttgt	acaaat|atttgt	acaaca|tgttgt	acaacc|ggttgt	acaacg|cgttgt	acaact|agttgt	acaaga|tcttgt	acaagc|gcttgt	acaagg|ccttgt	acaagt|acttgt	acaata|tattgt	acaatc|gattgt	acaatg|cattgt	acacaa|ttgtgt	acacac|gtgtgt	acacag|ctgtgt	acacat|atgtgt	acacca|tggtgt	acaccc|gggtgt	acaccg|cggtgt	acacct|aggtgt	acacga|tcgtgt	acacgc|gcgtgt	acacgg|ccgtgt	acacgt|acgtgt	acacta|tagtgt	acactc|gagtgt	acactg|cagtgt	acagaa|ttctgt	acagac|gtctgt	acagag|ctctgt	acagat|atctgt	acagca|tgctgt	acagcc|ggctgt	acagcg|cgctgt	acagct|agctgt	acagga|tcctgt	acaggc|gcctgt	acaggg|ccctgt	acaggt|acctgt	acagta|tactgt	acagtc|gactgt	acagtg|cactgt	acataa|ttatgt	acatac|gtatgt	acatag|ctatgt	acatat|atatgt	acatca|tgatgt	acatcc|ggatgt	acatcg|cgatgt	acatct|agatgt	acatga|tcatgt	acatgc|gcatgt	acatgg|ccatgt	acatgt|acatgt	acatta|taatgt	acattc|gaatgt	acattg|caatgt	accaaa|tttggt	accaac|gttggt	accaag|cttggt	accaat|attggt	accaca|tgtggt	accacc|ggtggt	accacg|cgtggt	accact|agtggt	accaga|tctggt	accagc|gctggt	accagg|cctggt	accagt|actggt	accata|tatggt	accatc|gatggt	accatg|catggt	acccaa|ttgggt	acccac|gtgggt	acccag|ctgggt	acccat|atgggt	acccca|tggggt	accccc|gggggt	accccg|cggggt	acccct|aggggt	acccga|tcgggt	acccgc|gcgggt	acccgg|ccgggt	acccgt|acgggt	acccta|tagggt	accctc|gagggt	accctg|cagggt	accgaa|ttcggt	accgac|gtcggt	accgag|ctcggt	accgat|atcggt	accgca|tgcggt	accgcc|ggcggt	accgcg|cgcggt	accgct|agcggt	accgga|tccggt	accggc|gccggt	accggg|cccggt	accggt|accggt	accgta|tacggt	accgtc|gacggt	accgtg|cacggt	acctaa|ttaggt	acctac|gtaggt	acctag|ctaggt	acctat|ataggt	acctca|tgaggt	acctcc|ggaggt	acctcg|cgaggt	acctct|agaggt	acctga|tcaggt	acctgc|gcaggt	acctgg|ccaggt	acctta|taaggt	accttc|gaaggt	accttg|caaggt	acgaaa|tttcgt	acgaac|gttcgt	acgaag|cttcgt	acgaat|attcgt	acgaca|tgtcgt	acgacc|ggtcgt	acgacg|cgtcgt	acgact|agtcgt	acgaga|tctcgt	acgagc|gctcgt	acgagg|cctcgt	acgagt|actcgt	acgata|tatcgt	acgatc|gatcgt	acgatg|catcgt	acgcaa|ttgcgt	acgcac|gtgcgt	acgcag|ctgcgt	acgcat|atgcgt	acgcca|tggcgt	acgccc|gggcgt	acgccg|cggcgt	acgcct|aggcgt	acgcga|tcgcgt	acgcgc|gcgcgt	acgcgg|ccgcgt	acgcgt|acgcgt	acgcta|tagcgt	acgctc|gagcgt	acgctg|cagcgt	acggaa|ttccgt	acggac|gtccgt	acggag|ctccgt	acggat|atccgt	acggca|tgccgt	acggcc|ggccgt	acggcg|cgccgt	acggct|agccgt	acggga|tcccgt	acgggc|gcccgt	acgggg|ccccgt	acggta|taccgt	acggtc|gaccgt	acggtg|caccgt	acgtaa|ttacgt	acgtac|gtacgt	acgtag|ctacgt	acgtat|atacgt	acgtca|tgacgt	acgtcc|ggacgt	acgtcg|cgacgt	acgtct|agacgt	acgtga|tcacgt	acgtgc|gcacgt	acgtgg|ccacgt	acgtta|taacgt	acgttc|gaacgt	acgttg|caacgt	actaaa|tttagt	actaac|gttagt	actaag|cttagt	actaat|attagt	actaca|tgtagt	actacc|ggtagt	actacg|cgtagt	actact|agtagt	actaga|tctagt	actagc|gctagt	actagg|cctagt	actagt|actagt	actata|tatagt	actatc|gatagt	actatg|catagt	actcaa|ttgagt	actcac|gtgagt	actcag|ctgagt	actcat|atgagt	actcca|tggagt	actccc|gggagt	actccg|cggagt	actcct|aggagt	actcga|tcgagt	actcgc|gcgagt	actcgg|ccgagt	actcta|tagagt	actctc|gagagt	actctg|cagagt	actgaa|ttcagt	actgac|gtcagt	actgag|ctcagt	actgat|atcagt	actgca|tgcagt	actgcc|ggcagt	actgcg|cgcagt	actgct|agcagt	actgga|tccagt	actggc|gccagt	actggg|cccagt	actgta|tacagt	actgtc|gacagt	actgtg|cacagt	acttaa|ttaagt	acttac|gtaagt	acttag|ctaagt	acttat|ataagt	acttca|tgaagt	acttcc|ggaagt	acttcg|cgaagt	acttct|agaagt	acttga|tcaagt	acttgc|gcaagt	acttgg|ccaagt	acttta|taaagt	actttc|gaaagt	actttg|caaagt	agaaaa|ttttct	agaaac|gtttct	agaaag|ctttct	agaaat|atttct	agaaca|tgttct	agaacc|ggttct	agaacg|cgttct	agaact|agttct	agaaga|tcttct	agaagc|gcttct	agaagg|ccttct	agaata|tattct	agaatc|gattct	agaatg|cattct	agacaa|ttgtct	agacac|gtgtct	agacag|ctgtct	agacat|atgtct	agacca|tggtct	agaccc|gggtct	agaccg|cggtct	agacct|aggtct	agacga|tcgtct	agacgc|gcgtct	agacgg|ccgtct	agacta|tagtct	agactc|gagtct	agactg|cagtct	agagaa|ttctct	agagac|gtctct	agagag|ctctct	agagat|atctct	agagca|tgctct	agagcc|ggctct	agagcg|cgctct	agagct|agctct	agagga|tcctct	agaggc|gcctct	agaggg|ccctct	agagta|tactct	agagtc|gactct	agagtg|cactct	agataa|ttatct	agatac|gtatct	agatag|ctatct	agatat|atatct	agatca|tgatct	agatcc|ggatct	agatcg|cgatct	agatct|agatct	agatga|tcatct	agatgc|gcatct	agatgg|ccatct	agatta|taatct	agattc|gaatct	agattg|caatct	agcaaa|tttgct	agcaac|gttgct	agcaag|cttgct	agcaat|attgct	agcaca|tgtgct	agcacc|ggtgct	agcacg|cgtgct	agcact|agtgct	agcaga|tctgct	agcagc|gctgct	agcagg|cctgct	agcata|tatgct	agcatc|gatgct	agcatg|catgct	agccaa|ttggct	agccac|gtggct	agccag|ctggct	agccat|atggct	agccca|tgggct	agcccc|ggggct	agcccg|cgggct	agccct|agggct	agccga|tcggct	agccgc|gcggct	agccgg|ccggct	agccta|taggct	agcctc|gaggct	agcctg|caggct	agcgaa|ttcgct	agcgac|gtcgct	agcgag|ctcgct	agcgat|atcgct	agcgca|tgcgct	agcgcc|ggcgct	agcgcg|cgcgct	agcgct|agcgct	agcgga|tccgct	agcggc|gccgct	agcggg|cccgct	agcgta|tacgct	agcgtc|gacgct	agcgtg|cacgct	agctaa|ttagct	agctac|gtagct	agctag|ctagct	agctat|atagct	agctca|tgagct	agctcc|ggagct	agctcg|cgagct	agctga|tcagct	agctgc|gcagct	agctgg|ccagct	agctta|taagct	agcttc|gaagct	agcttg|caagct	aggaaa|tttcct	aggaac|gttcct	aggaag|cttcct	aggaat|attcct	aggaca|tgtcct	aggacc|ggtcct	aggacg|cgtcct	aggact|agtcct	aggaga|tctcct	aggagc|gctcct	aggagg|cctcct	aggata|tatcct	aggatc|gatcct	aggatg|catcct	aggcaa|ttgcct	aggcac|gtgcct	aggcag|ctgcct	aggcat|atgcct	aggcca|tggcct	aggccc|gggcct	aggccg|cggcct	aggcct|aggcct	aggcga|tcgcct	aggcgc|gcgcct	aggcgg|ccgcct	aggcta|tagcct	aggctc|gagcct	aggctg|cagcct	agggaa|ttccct	agggac|gtccct	agggag|ctccct	agggat|atccct	agggca|tgccct	agggcc|ggccct	agggcg|cgccct	agggga|tcccct	aggggc|gcccct	aggggg|ccccct	agggta|taccct	agggtc|gaccct	agggtg|caccct	aggtaa|ttacct	aggtac|gtacct	aggtag|ctacct	aggtat|atacct	aggtca|tgacct	aggtcc|ggacct	aggtcg|cgacct	aggtga|tcacct	aggtgc|gcacct	aggtgg|ccacct	aggtta|taacct	aggttc|gaacct	aggttg|caacct	agtaaa|tttact	agtaac|gttact	agtaag|cttact	agtaat|attact	agtaca|tgtact	agtacc|ggtact	agtacg|cgtact	agtact|agtact	agtaga|tctact	agtagc|gctact	agtagg|cctact	agtata|tatact	agtatc|gatact	agtatg|catact	agtcaa|ttgact	agtcac|gtgact	agtcag|ctgact	agtcat|atgact	agtcca|tggact	agtccc|gggact	agtccg|cggact	agtcga|tcgact	agtcgc|gcgact	agtcgg|ccgact	agtcta|tagact	agtctc|gagact	agtctg|cagact	agtgaa|ttcact	agtgac|gtcact	agtgag|ctcact	agtgat|atcact	agtgca|tgcact	agtgcc|ggcact	agtgcg|cgcact	agtgga|tccact	agtggc|gccact	agtggg|cccact	agtgta|tacact	agtgtc|gacact	agtgtg|cacact	agttaa|ttaact	agttac|gtaact	agttag|ctaact	agttat|ataact	agttca|tgaact	agttcc|ggaact	agttcg|cgaact	agttga|tcaact	agttgc|gcaact	agttgg|ccaact	agttta|taaact	agtttc|gaaact	agtttg|caaact	ataaaa|ttttat	ataaac|gtttat	ataaag|ctttat	ataaat|atttat	ataaca|tgttat	ataacc|ggttat	ataacg|cgttat	ataaga|tcttat	ataagc|gcttat	ataagg|ccttat	ataata|tattat	ataatc|gattat	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; Host name	rsat
; Job started	2026-06-05.093853
; Job done	2026-06-05.093855
; Seconds	2.35
;	user	2.35
;	system	0
;	cuser	0
;	csystem	0