peak-motifs XSXZ126_(no_IgG)

Motif discovery

Motif 1 oligos_6nt_mkv3_m1

k-mer sig=94.88; evalue=1.3e-95

ggGGCGGGGCgGgg

CCCCGCCCCGCCCC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ggGGCGGGGCgGgg

ZBED4 MA2328.1 R 10 0.7143 0.964 0.688 NA NA

KLF12 MA0742.2 D 9 0.6429 0.959 0.617 NA NA

KLF5 MA0599.1 R 10 0.7143 0.862 0.616 NA NA

Total matches= 27 (24 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 338 (33.80%)
Max nb of predicted sites per peak: 25
(P_5564::chr2:112812010-112813011)
Mean nb of predicted sites per peak: 3.04

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 2 oligos_6nt_mkv3_m2

k-mer sig=60.43; evalue=3.7e-61

whcAgCCAATcAra

TYTGATTGGCTGDW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor whcAgCCAATcAra

NFYA MA0060.4 D 8 0.5714 0.992 0.567 NA NA

NFYB MA0502.3 R 9 0.6429 0.820 0.527 NA NA

NFYC MA1644.2 D 7 0.5000 0.996 0.498 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 234 (23.40%)
Max nb of predicted sites per peak: 6
(P_5110::chr19:54640708-54641709)
Mean nb of predicted sites per peak: 1.74

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 3 oligos_6nt_mkv3_m3

k-mer sig=27.94; evalue=1.1e-28

TgGAATGGAATgg

CCATTCCATTCCA

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor TgGAATGGAATgg

TEAD4 MA0809.3 R 8 0.6154 0.873 0.537 NA NA

TEAD1 MA0090.4 R 9 0.6923 0.764 0.529 NA NA

TEAD3 MA0808.1 R 8 0.6154 0.840 0.517 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 181 (18.10%)
Max nb of predicted sites per peak: 168
(P_10124::chrUn_gl000216:75308-76309)
Mean nb of predicted sites per peak: 65.22

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 4 oligos_6nt_mkv3_m4

k-mer sig=26.59; evalue=2.6e-27

gsgCGGAGCsg

CSGCTCCGCSC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gsgCGGAGCsg

ZNF331 MA1726.2 D 10 0.9091 0.728 0.661 NA NA

ZBED4 MA2328.1 R 9 0.7500 0.866 0.650 NA NA

KLF7 MA1959.2 D 8 0.7273 0.732 0.533 NA NA

Total matches= 9 (6 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 281 (28.10%)
Max nb of predicted sites per peak: 12
(P_4435::chr19:491408-492409)
Mean nb of predicted sites per peak: 1.70

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 5 oligos_6nt_mkv3_m5

k-mer sig=60.43; evalue=3.7e-61

htmAACCAATCAym

KRTGATTGGTTKAD

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor htmAACCAATCAym

DUX4 MA0468.1 D 11 0.7857 0.735 0.577 NA NA

NFYA MA0060.4 D 8 0.5714 0.987 0.564 NA NA

PBX1 MA0070.2 D 9 0.6429 0.801 0.515 NA NA

Total matches= 9 (6 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 278 (27.80%)
Max nb of predicted sites per peak: 9
(P_3296::chr16:908087-909088)
Mean nb of predicted sites per peak: 1.64

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 6 oligos_6nt_mkv3_m6

k-mer sig=24.56; evalue=2.8e-25

sgcgTGCGCAcgcs

SGCGTGCGCACGCS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sgcgTGCGCAcgcs

Nrf1 MA0506.3 R 11 0.7333 0.759 0.557 NA NA

ZBTB14 MA1650.2 D 8 0.5714 0.765 0.437 NA NA

HINFP MA0131.3 R 8 0.5714 0.750 0.428 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 152 (15.20%)
Max nb of predicted sites per peak: 12
(P_6222::chr21:9825741-9826742)
Mean nb of predicted sites per peak: 2.80

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 7 oligos_6nt_mkv3_m7

k-mer sig=12.46; evalue=3.5e-13

chcACCCCACCCmc

GKGGGTGGGGTGDG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor chcACCCCACCCmc

PATZ1 MA1961.2 R 11 0.7857 0.851 0.669 NA NA

KLF5 MA0599.1 D 10 0.7143 0.899 0.642 NA NA

KLF16 MA0741.1 D 11 0.7857 0.764 0.600 NA NA

Total matches= 28 (25 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 328 (32.80%)
Max nb of predicted sites per peak: 42
(P_4337::chr18:4510414-4511415)
Mean nb of predicted sites per peak: 2.56

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 8 oligos_6nt_mkv3_m8

k-mer sig=94.88; evalue=1.3e-95

hsGCCCCGCCCCtccccc

GGGGGAGGGGCGGGGCSD

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor hsGCCCCGCCCCtccccc

PATZ1 MA1961.2 R 11 0.6111 0.908 0.555 NA NA

ZNF148 MA1653.2 D 10 0.5556 0.920 0.511 NA NA

SP3 MA0746.3 D 11 0.6111 0.836 0.511 NA NA

Total matches= 23 (20 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 400 (40.00%)
Max nb of predicted sites per peak: 26
(P_5564::chr2:112812010-112813011)
Mean nb of predicted sites per peak: 4.12

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 9 oligos_6nt_mkv3_m9

k-mer sig=11.38; evalue=4.2e-12

gvcCGAGCGAGgv

BCCTCGCTCGGBC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gvcCGAGCGAGgv

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 161 (16.10%)
Max nb of predicted sites per peak: 37
(P_3234::chr15:100467200-100468201)
Mean nb of predicted sites per peak: 1.53

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 10 oligos_6nt_mkv3_m10

k-mer sig=10.79; evalue=1.6e-11

ssccCGGCCGggss

SSCCCGGCCGGGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssccCGGCCGggss

KLF15 MA1513.2 D 8 0.5714 0.787 0.450 NA NA

KLF7 MA1959.2 R 8 0.5714 0.704 0.402 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 132 (13.20%)
Max nb of predicted sites per peak: 12
(P_6223::chr21:9826641-9827642)
Mean nb of predicted sites per peak: 2.78

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 11 positions_6nt_m1

k-mer sig=26.01; evalue=9.8e-27

ywcTgATTGGctgr

YCAGCCAATCAGWR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ywcTgATTGGctgr

NFYA MA0060.4 R 8 0.5714 0.988 0.565 NA NA

NFYB MA0502.3 D 9 0.6429 0.865 0.556 NA NA

NFYC MA1644.2 R 7 0.5000 0.985 0.493 NA NA

Total matches= 6 (3 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 241 (24.10%)
Max nb of predicted sites per peak: 7
(P_6873::chr3:119813081-119814082)
Mean nb of predicted sites per peak: 1.87

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 12 positions_6nt_m2

k-mer sig=22.19; evalue=6.5e-23

yggCCCCGCCCCyyc

GRRGGGGCGGGGCCR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor yggCCCCGCCCCyyc

PATZ1 MA1961.2 R 11 0.7333 0.933 0.684 NA NA

KLF16 MA0741.1 D 11 0.7333 0.858 0.629 NA NA

SP3 MA0746.3 D 11 0.7333 0.852 0.625 NA NA

Total matches= 32 (29 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 397 (39.70%)
Max nb of predicted sites per peak: 25
(P_5564::chr2:112812010-112813011)
Mean nb of predicted sites per peak: 3.96

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 13 positions_6nt_m3

k-mer sig=26.01; evalue=9.8e-27

yycATTGGCTkm

KMAGCCAATGRR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor yycATTGGCTkm

NFYB MA0502.3 D 9 0.7500 0.937 0.703 NA NA

NFYA MA0060.4 R 8 0.6667 0.822 0.548 NA NA

NFYC MA1644.2 R 7 0.5833 0.826 0.482 NA NA

Total matches= 11 (8 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 217 (21.70%)
Max nb of predicted sites per peak: 9
(P_3335::chr16:2955340-2956341)
Mean nb of predicted sites per peak: 1.65

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 14 positions_6nt_m4

k-mer sig=9.37; evalue=4.3e-10

wwwTTaATTTTATTAAAWTTaAww

WWTTAAWTTTAATAAAATTAAWWW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wwwTTaATTTTATTAAAWTTaAww

PHOX2B MA0681.3 R 12 0.5000 0.853 0.427 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 453 (45.30%)
Max nb of predicted sites per peak: 330
(P_9488::chr8:43094333-43095334)
Mean nb of predicted sites per peak: 28.71

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 15 positions_6nt_m5

k-mer sig=9.37; evalue=4.3e-10

wwAmAAAAAAwwAAAAwAAAAAaw

WTTTTTTWTTTTWWTTTTTTKTWW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wwAmAAAAAAwwAAAAwAAAAAaw

FOXD3 MA0041.3 D 14 0.5833 0.725 0.423 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 367 (36.70%)
Max nb of predicted sites per peak: 227
(P_9489::chr8:43095434-43096435)
Mean nb of predicted sites per peak: 10.64

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 16 positions_6nt_m6

k-mer sig=15.85; evalue=1.4e-16

maACCAATCAgmd

HKCTGATTGGTTK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor maACCAATCAgmd

NFYA MA0060.4 D 8 0.6154 0.989 0.609 NA NA

NFYC MA1644.2 D 7 0.5385 0.985 0.530 NA NA

PBX1 MA0070.2 D 9 0.6923 0.764 0.529 NA NA

Total matches= 9 (6 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 242 (24.20%)
Max nb of predicted sites per peak: 20
(P_3296::chr16:908087-909088)
Mean nb of predicted sites per peak: 1.81

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 17 positions_6nt_m7

k-mer sig=22.19; evalue=6.5e-23

cssCcCCGCCgCCcCcsc

GSGGGGGCGGCGGGGSSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssCcCCGCCgCCcCcsc

PATZ1 MA1961.2 R 11 0.6111 0.863 0.528 NA NA

ZNF93 MA1721.2 R 13 0.6842 0.719 0.492 NA NA

KLF16 MA0741.1 D 11 0.6111 0.758 0.463 NA NA

Total matches= 18 (15 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 355 (35.50%)
Max nb of predicted sites per peak: 33
(P_5454::chr2:88123956-88124957)
Mean nb of predicted sites per peak: 4.34

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 18 positions_6nt_m8

k-mer sig=5.05; evalue=8.9e-06

swGACCCCrc

GYGGGGTCWS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor swGACCCCrc

ZBTB7B MA0694.2 D 9 0.8182 0.727 0.595 NA NA

ZBTB7C MA0695.2 D 8 0.8000 0.721 0.577 NA NA

Plagl1 MA1615.2 R 8 0.8000 0.717 0.574 NA NA

Total matches= 23 (20 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 254 (25.40%)
Max nb of predicted sites per peak: 30
(P_5188::chr2:487793-488794)
Mean nb of predicted sites per peak: 1.80

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 19 positions_6nt_m9

k-mer sig=4.60; evalue=2.5e-05

TgGAATGGAATgg

CCATTCCATTCCA

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor TgGAATGGAATgg

TEAD4 MA0809.3 R 8 0.6154 0.874 0.538 NA NA

TEAD1 MA0090.4 R 9 0.6923 0.764 0.529 NA NA

TEAD3 MA0808.1 R 8 0.6154 0.841 0.518 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 179 (17.90%)
Max nb of predicted sites per peak: 168
(P_10124::chrUn_gl000216:75308-76309)
Mean nb of predicted sites per peak: 66.09

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 20 positions_6nt_m10

k-mer sig=4.14; evalue=7.2e-05

cgCATGCGCrs

SYGCGCATGCG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cgCATGCGCrs

Nrf1 MA0506.3 R 11 0.9167 0.868 0.796 NA NA

TCFL5 MA0632.3 D 8 0.7273 0.789 0.574 NA NA

ZBTB14 MA1650.2 R 8 0.7273 0.749 0.544 NA NA

Total matches= 4 (1 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 147 (14.70%)
Max nb of predicted sites per peak: 14
(P_2600::chr13:114428379-114429380)
Mean nb of predicted sites per peak: 1.97

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 21 oligos_7nt_mkv4_m1

k-mer sig=54.92; evalue=1.2e-55

chgGCCCCGCCCCcys

SRGGGGGCGGGGCCDG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor chgGCCCCGCCCCcys

PATZ1 MA1961.2 R 11 0.6875 0.921 0.633 NA NA

KLF16 MA0741.1 D 11 0.6875 0.874 0.601 NA NA

SP3 MA0746.3 D 11 0.6875 0.865 0.594 NA NA

Total matches= 33 (30 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 404 (40.40%)
Max nb of predicted sites per peak: 26
(P_5564::chr2:112812010-112813011)
Mean nb of predicted sites per peak: 4.01

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 22 oligos_7nt_mkv4_m2

k-mer sig=37.60; evalue=2.5e-38

TgGAATGGAATggA

TCCATTCCATTCCA

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor TgGAATGGAATggA

TEAD4 MA0809.3 R 8 0.5714 0.873 0.499 NA NA

TEAD1 MA0090.4 R 9 0.6429 0.768 0.494 NA NA

TEAD3 MA0808.1 R 8 0.5714 0.841 0.480 NA NA

Total matches= 6 (3 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 144 (14.40%)
Max nb of predicted sites per peak: 179
(P_10124::chrUn_gl000216:75308-76309)
Mean nb of predicted sites per peak: 88.15

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 23 oligos_7nt_mkv4_m3

k-mer sig=27.38; evalue=4.2e-28

tyAgCCAATcAgarm

KYTCTGATTGGCTRA

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor tyAgCCAATcAgarm

NFYA MA0060.4 D 8 0.5333 0.995 0.531 NA NA

NFYB MA0502.3 R 9 0.6000 0.833 0.500 NA NA

Gfi1B MA0483.2 D 10 0.6667 0.704 0.469 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 229 (22.90%)
Max nb of predicted sites per peak: 7
(P_4288::chr17:79980458-79981459)
Mean nb of predicted sites per peak: 1.93

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 24 oligos_7nt_mkv4_m4

k-mer sig=21.15; evalue=7.1e-22

krGGCgGAGCckArrs

SYYTMGGCTCCGCCYM

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor krGGCgGAGCckArrs

ZBED4 MA2328.1 R 10 0.6250 0.792 0.495 NA NA

SP4 MA0685.2 D 9 0.5625 0.879 0.494 NA NA

SP1 MA0079.5 D 9 0.5625 0.847 0.476 NA NA

Total matches= 12 (9 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 381 (38.10%)
Max nb of predicted sites per peak: 35
(P_2520::chr13:44715774-44716775)
Mean nb of predicted sites per peak: 2.93

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 25 oligos_7nt_mkv4_m5

k-mer sig=18.84; evalue=1.4e-19

chgGCCACGCCccc

GGGGGCGTGGCCDG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor chgGCCACGCCccc

SP3 MA0746.3 D 11 0.7857 0.955 0.750 NA NA

KLF16 MA0741.1 D 11 0.7857 0.911 0.715 NA NA

SP9 MA1564.2 D 10 0.7143 0.954 0.681 NA NA

Total matches= 34 (31 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 368 (36.80%)
Max nb of predicted sites per peak: 21
(P_5564::chr2:112812010-112813011)
Mean nb of predicted sites per peak: 3.38

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 26 oligos_7nt_mkv4_m6

k-mer sig=14.63; evalue=2.3e-15

cscCCCCTCCCCcc

GGGGGGAGGGGGSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cscCCCCTCCCCcc

PATZ1 MA1961.2 R 11 0.7857 0.941 0.739 NA NA

ZNF148 MA1653.2 D 10 0.7143 0.977 0.698 NA NA

ZNF281 MA1630.3 R 10 0.7143 0.946 0.676 NA NA

Total matches= 28 (25 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 323 (32.30%)
Max nb of predicted sites per peak: 22
(P_5109::chr19:54636953-54637954)
Mean nb of predicted sites per peak: 2.05

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 27 oligos_7nt_mkv4_m7

k-mer sig=14.45; evalue=3.5e-15

ccCCGCCTCCyc

GRGGAGGCGGGG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ccCCGCCTCCyc

SP2 MA0516.3 R 9 0.7500 0.858 0.644 NA NA

ZNF281 MA1630.3 R 10 0.8333 0.750 0.625 NA NA

PATZ1 MA1961.2 R 10 0.7692 0.805 0.619 NA NA

Total matches= 25 (22 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 345 (34.50%)
Max nb of predicted sites per peak: 34
(P_5454::chr2:88123956-88124957)
Mean nb of predicted sites per peak: 2.94

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 28 oligos_7nt_mkv4_m8

k-mer sig=10.50; evalue=3.2e-11

csCCAGGCCCcs

SGGGGCCTGGSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csCCAGGCCCcs

SP3 MA0746.3 D 11 0.9167 0.788 0.722 NA NA

ZNF213 MA2121.1 D 12 1.0000 0.722 0.722 NA NA

ZBTB24 MA2330.1 D 10 0.8333 0.820 0.684 NA NA

Total matches= 24 (21 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 222 (22.20%)
Max nb of predicted sites per peak: 9
(P_8980::chr7:94287164-94288165)
Mean nb of predicted sites per peak: 1.46

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 29 oligos_7nt_mkv4_m9

k-mer sig=10.34; evalue=4.6e-11

cccGGCCCsGCCCcs

SGGGGCSGGGCCGGG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cccGGCCCsGCCCcs

PATZ1 MA1961.2 R 11 0.7333 0.822 0.603 NA NA

SP3 MA0746.3 D 11 0.7333 0.749 0.549 NA NA

KLF5 MA0599.1 D 10 0.6667 0.816 0.544 NA NA

Total matches= 22 (19 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 335 (33.50%)
Max nb of predicted sites per peak: 20
(P_5564::chr2:112812010-112813011)
Mean nb of predicted sites per peak: 3.02

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 30 oligos_7nt_mkv4_m10

k-mer sig=9.70; evalue=2e-10

cmcCACCmCCACCmcc

GGKGGTGGKGGTGGKG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cmcCACCmCCACCmcc

PATZ1 MA1961.2 R 11 0.6875 0.857 0.589 NA NA

KLF9 MA1107.3 D 11 0.6875 0.821 0.565 NA NA

SP8 MA0747.2 D 11 0.6875 0.784 0.539 NA NA

Total matches= 26 (23 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 304 (30.40%)
Max nb of predicted sites per peak: 304
(P_7221::chr4:6513117-6514118)
Mean nb of predicted sites per peak: 7.71

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 31 positions_7nt_m1

k-mer sig=20.21; evalue=6.2e-21

hrGCCCCGCCCCyyc

GRRGGGGCGGGGCYD

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor hrGCCCCGCCCCyyc

PATZ1 MA1961.2 R 11 0.7333 0.912 0.668 NA NA

KLF16 MA0741.1 D 11 0.7333 0.845 0.620 NA NA

SP3 MA0746.3 D 11 0.7333 0.845 0.619 NA NA

Total matches= 31 (28 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 402 (40.20%)
Max nb of predicted sites per peak: 26
(P_5564::chr2:112812010-112813011)
Mean nb of predicted sites per peak: 3.94

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 32 positions_7nt_m2

k-mer sig=10.59; evalue=2.6e-11

wycAgCCAATgAdw

WHTCATTGGCTGRW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wycAgCCAATgAdw

NFYB MA0502.3 R 9 0.6429 0.869 0.559 NA NA

NFYA MA0060.4 D 8 0.5714 0.876 0.501 NA NA

NFYC MA1644.2 D 7 0.5000 0.889 0.444 NA NA

Total matches= 4 (1 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 238 (23.80%)
Max nb of predicted sites per peak: 11
(P_3559::chr16:46432007-46433008)
Mean nb of predicted sites per peak: 1.98

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 33 positions_7nt_m3

k-mer sig=10.59; evalue=2.6e-11

hycAGCCAATcAgar

YTCTGATTGGCTGRD

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor hycAGCCAATcAgar

NFYA MA0060.4 D 8 0.5333 0.995 0.531 NA NA

NFYB MA0502.3 R 9 0.6000 0.808 0.485 NA NA

NFYC MA1644.2 D 7 0.4667 0.999 0.466 NA NA

Total matches= 3

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 216 (21.60%)
Max nb of predicted sites per peak: 7
(P_4288::chr17:79980458-79981459)
Mean nb of predicted sites per peak: 1.79

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 34 positions_7nt_m4

k-mer sig=7.98; evalue=1e-08

ycTcATTGGCcrh

DYGGCCAATGAGR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ycTcATTGGCcrh

NFYB MA0502.3 D 9 0.6923 0.983 0.681 NA NA

NFYA MA0060.4 R 8 0.6154 0.860 0.529 NA NA

NFYC MA1644.2 R 7 0.5385 0.870 0.469 NA NA

Total matches= 8 (5 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 219 (21.90%)
Max nb of predicted sites per peak: 15
(P_1948::chr12:2629048-2630049)
Mean nb of predicted sites per peak: 1.65

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 35 positions_7nt_m5

k-mer sig=20.21; evalue=6.2e-21

yvgCCCCGCCCmccc

GGGKGGGCGGGGCBR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor yvgCCCCGCCCmccc

PATZ1 MA1961.2 R 11 0.7333 0.911 0.668 NA NA

SP3 MA0746.3 D 11 0.7333 0.889 0.652 NA NA

KLF16 MA0741.1 D 11 0.7333 0.858 0.629 NA NA

Total matches= 33 (30 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 400 (40.00%)
Max nb of predicted sites per peak: 23
(P_5564::chr2:112812010-112813011)
Mean nb of predicted sites per peak: 3.71

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 36 positions_7nt_m6

k-mer sig=4.64; evalue=2.3e-05

ssCCCGCGGGss

SSCCCGCGGGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssCCCGCGGGss

TFAP2A MA0810.2 D 11 0.9167 0.725 0.665 NA NA

TFAP2C MA0524.3 R 11 0.9167 0.704 0.646 NA NA

TFAP2B MA0811.2 R 11 0.9167 0.702 0.643 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 76 (7.60%)
Max nb of predicted sites per peak: 6
(P_6222::chr21:9825741-9826742)
Mean nb of predicted sites per peak: 2.50

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 37 positions_7nt_m7

k-mer sig=4.61; evalue=2.5e-05

syGCGCATGCGCrs

SYGCGCATGCGCRS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syGCGCATGCGCrs

Nrf1 MA0506.3 D 12 0.8571 0.944 0.809 NA NA

ZBTB14 MA1650.2 R 8 0.5714 0.791 0.452 NA NA

TCFL5 MA0632.3 R 8 0.5714 0.771 0.440 NA NA

Total matches= 4 (1 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 191 (19.10%)
Max nb of predicted sites per peak: 18
(P_6222::chr21:9825741-9826742)
Mean nb of predicted sites per peak: 3.53

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 38 positions_7nt_m8

k-mer sig=15.52; evalue=3e-16

ggrGGCGGGGCyd

HRGCCCCGCCYCC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ggrGGCGGGGCyd

PATZ1 MA1961.2 D 11 0.8462 0.909 0.770 NA NA

SP3 MA0746.3 R 11 0.8462 0.821 0.695 NA NA

KLF16 MA0741.1 R 11 0.8462 0.797 0.674 NA NA

Total matches= 31 (28 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 374 (37.40%)
Max nb of predicted sites per peak: 27
(P_5564::chr2:112812010-112813011)
Mean nb of predicted sites per peak: 3.54

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 39 positions_7nt_m9

k-mer sig=2.94; evalue=0.0011

sccGCCGCCGCcg

CGGCGGCGGCGGS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sccGCCGCCGCcg

ZNF93 MA1721.2 R 12 0.8000 0.809 0.647 NA NA

ZNF610 MA1713.2 D 9 0.6429 0.771 0.496 NA NA

SP1 MA0079.5 R 9 0.6923 0.711 0.492 NA NA

Total matches= 8 (5 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 292 (29.20%)
Max nb of predicted sites per peak: 35
(P_5454::chr2:88123956-88124957)
Mean nb of predicted sites per peak: 3.55

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 40 positions_7nt_m10

k-mer sig=3.92; evalue=0.00012

scCACGCCCCTyc

GRAGGGGCGTGGS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor scCACGCCCCTyc

KLF16 MA0741.1 D 11 0.8462 0.865 0.732 NA NA

SP3 MA0746.3 D 11 0.8462 0.852 0.721 NA NA

SP8 MA0747.2 D 11 0.8462 0.818 0.692 NA NA

Total matches= 27 (24 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 266 (26.60%)
Max nb of predicted sites per peak: 32
(P_2600::chr13:114428379-114429380)
Mean nb of predicted sites per peak: 2.25

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Word significance table
Word comparisons		[tab] [html] [heatmap]
Comparisons between discovered motifs
Discovered motifs versus discovered motifs		[ Discovered motif(s): tf ] [ table: html txt ] [ alignments (logo): html text ] [ clustering: html ] [ graph: gml (for CytoScape) ]
Discovered motifs versus transcription factor databases
Motifs versus JASPAR2024_CORE_vertebrates_non-redundant database		[ table: html txt ] [ alignments (logo): html text ] [ graph: gml (for CytoScape) ]

Log files
Parameters and files		[txt] [html]
Time log		[time table] [time log] [html]

RSAT - peak-motifs result

Analysis: XSXZ126_(no_IgG)_500bp (05/06/2026 14:16)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gvcCGAGCGAGgv

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssccCGGCCGggss

KLF15 MA1513.2 D 8 0.5714 0.787 0.450 NA NA

KLF7 MA1959.2 R 8 0.5714 0.704 0.402 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wwwTTaATTTTATTAAAWTTaAww

PHOX2B MA0681.3 R 12 0.5000 0.853 0.427 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wwAmAAAAAAwwAAAAwAAAAAaw

FOXD3 MA0041.3 D 14 0.5833 0.725 0.423 NA NA

Total matches= 1

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

RSAT - peak-motifs result

Analysis: XSXZ126_(no_IgG)_500bp (05/06/2026 14:16)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor gvcCGAGCGAGgv Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssccCGGCCGggss KLF15 MA1513.2 D 8 0.5714 0.787 0.450 NA NA KLF7 MA1959.2 R 8 0.5714 0.704 0.402 NA NA Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor wwwTTaATTTTATTAAAWTTaAww PHOX2B MA0681.3 R 12 0.5000 0.853 0.427 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor wwAmAAAAAAwwAAAAwAAAAAaw FOXD3 MA0041.3 D 14 0.5833 0.725 0.423 NA NA Total matches= 1

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gvcCGAGCGAGgv

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssccCGGCCGggss

KLF15 MA1513.2 D 8 0.5714 0.787 0.450 NA NA

KLF7 MA1959.2 R 8 0.5714 0.704 0.402 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wwwTTaATTTTATTAAAWTTaAww

PHOX2B MA0681.3 R 12 0.5000 0.853 0.427 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wwAmAAAAAAwwAAAAwAAAAAaw

FOXD3 MA0041.3 D 14 0.5833 0.725 0.423 NA NA

Total matches= 1