peak-motifs no

Motif discovery

Motif 1 oligos_6nt_test_vs_ctrl_m1

k-mer sig=5.01; evalue=9.8e-06

caaCATGCCayt

ARTGGCATGTTG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 6 (35.29%)
Max nb of predicted sites per peak: 5
(LOC107796682|Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI|LOC107796682)
Mean nb of predicted sites per peak: 2.33

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 2 oligos_6nt_test_vs_ctrl_m2

k-mer sig=4.35; evalue=4.5e-05

krCAGGGGSak

MTSCCCCTGYM

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 10 (58.82%)
Max nb of predicted sites per peak: 3
(T459_20146|Capsicum_annuum.ASM51225v2.60|T459_20146)
Mean nb of predicted sites per peak: 1.40

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 3 oligos_6nt_test_vs_ctrl_m3

k-mer sig=1.54; evalue=0.029

mmCCTCCAyy

RRTGGAGGKK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 9 (52.94%)
Max nb of predicted sites per peak: 3
(HanXRQr2_Chr06g0245991|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr06g0245991)
Mean nb of predicted sites per peak: 1.44

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 4 oligos_6nt_test_vs_ctrl_m4

k-mer sig=1.16; evalue=0.069

dbGCAACAkG

CMTGTTGCVH

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 5 (29.41%)
Max nb of predicted sites per peak: 4
(LOC107825203|Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI|LOC107825203)
Mean nb of predicted sites per peak: 2.20

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 5 oligos_6nt_test_vs_ctrl_m5

k-mer sig=0.66; evalue=0.22

rwATTCCCmS

SKGGGAATWY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 7 (41.18%)
Max nb of predicted sites per peak: 3
(Cla97C02G043390|Citrullus_lanatus.Cla97_v1.62|Cla97C02G043390)
Mean nb of predicted sites per peak: 1.43

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 6 oligos_6nt_test_vs_ctrl_m6

k-mer sig=4.35; evalue=4.5e-05

mtCCCCCTasw

WSTAGGGGGAK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 6 (35.29%)
Max nb of predicted sites per peak: 2
(T459_20146|Capsicum_annuum.ASM51225v2.60|T459_20146)
Mean nb of predicted sites per peak: 1.17

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 7 oligos_6nt_test_vs_ctrl_m7

k-mer sig=2.35; evalue=0.0045

rrCaGGGGcar

YTGCCCCTGYY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 7 (41.18%)
Max nb of predicted sites per peak: 2
(LOC107796682|Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI|LOC107796682)
Mean nb of predicted sites per peak: 1.29

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 8 oligos_6nt_test_vs_ctrl_m8

k-mer sig=0.03; evalue=0.93

rraGTGGGwg

CWCCCACTYY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 7 (41.18%)
Max nb of predicted sites per peak: 2
(gene3683|Medicago_truncatula.MtrunA17r50ANR.60|gene3683)
Mean nb of predicted sites per peak: 1.57

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 9 oligos_6nt_test_vs_ctrl_m9

k-mer sig=0.02; evalue=0.95

ykGCaGCAry

RYTGCTGCMR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 4 (23.53%)
Max nb of predicted sites per peak: 3
(gene3683|Medicago_truncatula.MtrunA17r50ANR.60|gene3683)
Mean nb of predicted sites per peak: 2.00

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 10 oligos_7nt_test_vs_ctrl_m1

k-mer sig=16.67; evalue=2.1e-17

ccAAAAAAAky

RMTTTTTTTGG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 1 (5.88%)
Max nb of predicted sites per peak: 1
(AUR62007757.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62007757.v1.0)
Mean nb of predicted sites per peak: 1.00

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 11 oligos_7nt_test_vs_ctrl_m2

k-mer sig=3.35; evalue=0.00045

ygCAGGGGCwr

YWGCCCCTGCR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 9 (52.94%)
Max nb of predicted sites per peak: 2
(LOC107796682|Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI|LOC107796682)
Mean nb of predicted sites per peak: 1.22

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 12 oligos_7nt_test_vs_ctrl_m3

k-mer sig=2.35; evalue=0.0045

GmAaCATGCMAyt

ARTKGCATGTTKC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 13 oligos_7nt_test_vs_ctrl_m4

k-mer sig=1.27; evalue=0.054

rkAGGGGGAgk

MCTCCCCCTMY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 9 (52.94%)
Max nb of predicted sites per peak: 3
(T459_20146|Capsicum_annuum.ASM51225v2.60|T459_20146)
Mean nb of predicted sites per peak: 1.56

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 14 oligos_7nt_test_vs_ctrl_m5

k-mer sig=1.82; evalue=0.015

artGGCATGwwg

CWWCATGCCAYT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 4 (23.53%)
Max nb of predicted sites per peak: 3
(gene-LOC110799892|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110799892)
Mean nb of predicted sites per peak: 2.75

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 15 oligos_7nt_test_vs_ctrl_m6

k-mer sig=0.98; evalue=0.1

rrAGkGGGAvd

HBTCCCMCTYY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 8 (47.06%)
Max nb of predicted sites per peak: 2
(gene3683|Medicago_truncatula.MtrunA17r50ANR.60|gene3683)
Mean nb of predicted sites per peak: 1.50

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 16 oligos_7nt_test_vs_ctrl_m7

k-mer sig=0.35; evalue=0.45

gsaTGTTGCar

YTGCAACATSC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 7 (41.18%)
Max nb of predicted sites per peak: 4
(LOC107796682|Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI|LOC107796682)
Mean nb of predicted sites per peak: 1.71

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 17 oligos_7nt_test_vs_ctrl_m8

k-mer sig=0.02; evalue=0.95

wRAaATGGCra

TYGCCATTTYW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 9 (52.94%)
Max nb of predicted sites per peak: 3
(gene-LSAT_3X37280|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_3X37280)
Mean nb of predicted sites per peak: 1.56

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 18 oligos_8nt_test_vs_ctrl_m1

k-mer sig=7.28; evalue=5.2e-08

raCAAAaAaAtrt

AYATTTTTTTGTY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 4 (23.53%)
Max nb of predicted sites per peak: 2
(LOC107796682|Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI|LOC107796682)
Mean nb of predicted sites per peak: 1.25

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 19 oligos_8nt_test_vs_ctrl_m2

k-mer sig=7.28; evalue=5.2e-08

ySCAmAAAAAAyss

SSRTTTTTTKTGSR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 3 (17.65%)
Max nb of predicted sites per peak: 2
(AUR62007757.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62007757.v1.0)
Mean nb of predicted sites per peak: 1.33

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 20 oligos_8nt_test_vs_ctrl_m3

k-mer sig=7.28; evalue=5.2e-08

ahTAAAaAaATtr

YAATTTTTTTADT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 9 (52.94%)
Max nb of predicted sites per peak: 3
(T459_20168|Capsicum_annuum.ASM51225v2.60|T459_20168)
Mean nb of predicted sites per peak: 1.22

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 21 oligos_8nt_test_vs_ctrl_m4

k-mer sig=1.70; evalue=0.02

rtGSrACATGCCatdt

AHATGGCATGTYSCAY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 5 (29.41%)
Max nb of predicted sites per peak: 5
(LOC107796682|Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI|LOC107796682)
Mean nb of predicted sites per peak: 2.40

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 22 oligos_8nt_test_vs_ctrl_m5

k-mer sig=7.28; evalue=5.2e-08

ssCAAAAAAaCCm

KGGTTTTTTTGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 4 (23.53%)
Max nb of predicted sites per peak: 3
(AUR62007757.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62007757.v1.0)
Mean nb of predicted sites per peak: 2.25

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 23 oligos_8nt_test_vs_ctrl_m6

k-mer sig=7.28; evalue=5.2e-08

mrCAAaAaAAGtm

KACTTTTTTTGYK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 6 (35.29%)
Max nb of predicted sites per peak: 2
(gene-LOC110799892|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110799892)
Mean nb of predicted sites per peak: 1.17

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 24 oligos_8nt_test_vs_ctrl_m7

k-mer sig=0.97; evalue=0.11

awGCCCTTaAacb

VGTTTAAGGGCWT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 8 (47.06%)
Max nb of predicted sites per peak: 3
(BVRB_4g085970|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g085970)
Mean nb of predicted sites per peak: 1.50

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 25 oligos_8nt_test_vs_ctrl_m8

k-mer sig=0.85; evalue=0.14

mrAATACaGGsG

CSCCTGTATTYK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 7 (41.18%)
Max nb of predicted sites per peak: 3
(LOC107796682|Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI|LOC107796682)
Mean nb of predicted sites per peak: 1.43

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 26 oligos_8nt_test_vs_ctrl_m9

k-mer sig=0.72; evalue=0.19

wkGAaaTGGCAwS

SWTGCCATTTCMW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 27 dyads_test_vs_ctrl_m1

k-mer sig=4.14; evalue=7.2e-05

mraCATGCCayt

ARTGGCATGTYK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 6 (35.29%)
Max nb of predicted sites per peak: 6
(LOC107796682|Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI|LOC107796682)
Mean nb of predicted sites per peak: 3.00

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 28 dyads_test_vs_ctrl_m2

k-mer sig=4.14; evalue=7.2e-05

mvCCaCCmccssssccmssCCCvm

KBGGGSSKGGSSSSGGKGGTGGBK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 8 (47.06%)
Max nb of predicted sites per peak: 6
(HanXRQr2_Chr06g0245991|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr06g0245991)
Mean nb of predicted sites per peak: 2.62

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 29 dyads_test_vs_ctrl_m3

k-mer sig=4.14; evalue=7.2e-05

svrGatTSssRbbgGgGGGmg

CKCCCCCCVVYSSSAATCYBS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 11 (64.71%)
Max nb of predicted sites per peak: 5
(AUR62002952.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62002952.v1.0)
Mean nb of predicted sites per peak: 1.91

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 30 dyads_test_vs_ctrl_m4

k-mer sig=4.14; evalue=7.2e-05

vGGCrkSsSbGSkGssGSCkk

MMGSCSSCMSCVSSSMYGCCB

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 7 (41.18%)
Max nb of predicted sites per peak: 5
(gene22259|Medicago_truncatula.MtrunA17r50ANR.60|gene22259)
Mean nb of predicted sites per peak: 2.14

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 31 dyads_test_vs_ctrl_m5

k-mer sig=4.14; evalue=7.2e-05

rvCCabsGscgstssmsGssscaCCks

SMGGTGSSSCSKSSASCGSCSVTGGBY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 7 (41.18%)
Max nb of predicted sites per peak: 4
(gene22259|Medicago_truncatula.MtrunA17r50ANR.60|gene22259)
Mean nb of predicted sites per peak: 2.43

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 32 dyads_test_vs_ctrl_m6

k-mer sig=4.14; evalue=7.2e-05

vsCraSGGssGkrSsvsGvkstcctt

AAGGASMBCSBSSYMCSSCCSTYGSB

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 9 (52.94%)
Max nb of predicted sites per peak: 6
(HanXRQr2_Chr06g0245991|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr06g0245991)
Mean nb of predicted sites per peak: 1.89

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 33 dyads_test_vs_ctrl_m7

k-mer sig=4.14; evalue=7.2e-05

rsSbCsGGsbssbSsssGksssySsssss

SSSSSSRSSSMCSSSSVSSVSCCSGVSSY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 3 (17.65%)
Max nb of predicted sites per peak: 13
(gene22259|Medicago_truncatula.MtrunA17r50ANR.60|gene22259)
Mean nb of predicted sites per peak: 9.00

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 34 dyads_test_vs_ctrl_m8

k-mer sig=4.14; evalue=7.2e-05

ssccbssgsbsgssssbrgbSsyCSskb

VMSSGRSSVCYVSSSSCSVSCSSVGGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 6 (35.29%)
Max nb of predicted sites per peak: 12
(gene22259|Medicago_truncatula.MtrunA17r50ANR.60|gene22259)
Mean nb of predicted sites per peak: 4.83

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 35 dyads_test_vs_ctrl_m9

k-mer sig=4.14; evalue=7.2e-05

wsCtCsbSsbSSysSmsscska

TMSGSSKSSRSSVSSVSGAGSW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 7 (41.18%)
Max nb of predicted sites per peak: 3
(gene22259|Medicago_truncatula.MtrunA17r50ANR.60|gene22259)
Mean nb of predicted sites per peak: 1.86

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 36 dyads_test_vs_ctrl_m10

k-mer sig=4.14; evalue=7.2e-05

svSGScrsSssSSgsGsgGsSSccSGsbks

SMVSCSGGSSSCCSCSCSSSSSSYGSCSBS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 7 (41.18%)
Max nb of predicted sites per peak: 12
(gene22259|Medicago_truncatula.MtrunA17r50ANR.60|gene22259)
Mean nb of predicted sites per peak: 4.71

[ view in genome browser :

]
[ sites: text BED (UCSC track) ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Word significance table
Word comparisons		[tab] [html] [heatmap]
Comparisons between discovered motifs
Discovered motifs versus discovered motifs		[ Discovered motif(s): tf ] [ table: html txt ] [ alignments (logo): html text ] [ clustering: html ] [ graph: gml (for CytoScape) ]

Log files
Parameters and files		[txt] [html]
Time log		[time table] [time log] [html]

RSAT - peak-motifs result

Analysis: no_merge (08/06/2026 10:13)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results