; matrix-scan  -v 1 -matrix_format transfac -m $RSAT/public_html/tmp/www-data/2026/06/17/matrix-scan_2026-06-17.063005_LYMW3j.matrix -pseudo 1 -decimals 1 -2str -origin end -offset -200 -bginput -markov 1 -bg_pseudo 0.01 -return limits -return sites -return pval -return rank -lth score 5 -uth pval 1e-3 -i $RSAT/public_html/tmp/www-data/2026/06/17/tmp_sequence_2026-06-17.063005_SAMIJG.fasta -seq_format fasta -n score
; Slow counting mode            
; Input files
;	input	$RSAT/public_html/tmp/www-data/2026/06/17/tmp_sequence_2026-06-17.063005_SAMIJG.fasta
; Matrix files
;	matrix 1	$RSAT/public_html/tmp/www-data/2026/06/17/matrix-scan_2026-06-17.063005_LYMW3j.matrix
; Sequence format      	fasta
; Pseudo counts        	1
; Background model
;	Method        	input
;	Markov order  	1
;	Strand        	undef
;	Background pseudo-frequency	0.01
;	Residue probabilities
;		a	0.34242
;		c	0.18661
;		g	0.15145
;		t	0.31953
; Thresholds	lower	upper
;	pval  	NA	0.001
;	score 	5    	NA
; Output columns
;	1	seq_id
;	2	ft_type
;	3	ft_name
;	4	strand
;	5	start
;	6	end
;	7	sequence
;	8	weight
#seq_id	ft_type	ft_name	strand	start	end	sequence	weight	Pval	ln_Pval	sig	rank	rank_pm
BVRB_3g059400|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_3g059400	limit	START_END	D	-255	199	.	0	0	0	0
BVRB_3g059400|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_3g059400	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-137	-118	GGTTCATGAATCATGCCTTT	9.0	1.4e-05	-11.199	4.864	1	1
BVRB_3g059400|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_3g059400	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-136	-117	AAGGCATGATTCATGAACCT	8.7	1.9e-05	-10.888	4.729	2	2
BVRB_3g059400|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_3g059400	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-66	-47	AAGGGGTGCTTTGTGCNNNN	5.9	2.3e-04	-8.357	3.629	3	3
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	limit	START_END	D	-1501	199	.	0	0	0	0
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-94	-75	CTGCCATTAGAGAAGCCACT	5.2	4.2e-04	-7.781	3.379	1	1
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-93	-74	GTGGCTTCTCTAATGGCAGT	5.1	4.5e-04	-7.710	3.348	2	2
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-50	-31	ATGCCCTGGGCCGGGGATGA	5.1	4.5e-04	-7.710	3.348	3	3
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	limit	START_END	D	-1501	199	.	0	0	0	0
T459_31204|Capsicum_annuum.ASM51225v2.60|T459_31204	limit	START_END	D	-1501	199	.	0	0	0	0
T459_31204|Capsicum_annuum.ASM51225v2.60|T459_31204	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-846	-827	ATGGCATTGTCCATGCTAAT	9.7	6.7e-06	-11.908	5.172	1	1
T459_31204|Capsicum_annuum.ASM51225v2.60|T459_31204	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-129	-110	GCTGAATGTTTCATGCCACT	9.7	6.7e-06	-11.908	5.172	2	2
T459_31204|Capsicum_annuum.ASM51225v2.60|T459_31204	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-845	-826	TTAGCATGGACAATGCCATC	9.6	7.5e-06	-11.803	5.126	3	3
T459_31204|Capsicum_annuum.ASM51225v2.60|T459_31204	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-130	-111	GTGGCATGAAACATTCAGCT	9.1	1.3e-05	-11.290	4.903	4	4
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	limit	START_END	D	-1501	199	.	0	0	0	0
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-70	-51	GCGGCATGCTTCGAGCCTTG	13.0	1.3e-07	-15.885	6.899	1	1
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-69	-50	AAGGCTCGAAGCATGCCGCT	11.4	9.6e-07	-13.851	6.015	2	2
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-106	-87	CGCGGATGATTCATGCCTTT	9.5	8.2e-06	-11.710	5.085	3	3
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-105	-86	AAGGCATGAATCATCCGCGC	8.6	2.1e-05	-10.789	4.686	4	4
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-431	-412	TTAGTATGGTGTGTGCTAAG	7.0	9.2e-05	-9.289	4.034	5	5
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-212	-193	AGGCCAAGACTAGTGCATCT	5.4	3.5e-04	-7.949	3.452	6	6
Cla97C08G153070|Citrullus_lanatus.Cla97_v1.62|Cla97C08G153070	limit	START_END	D	-1501	199	.	0	0	0	0
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	limit	START_END	D	-1501	199	.	0	0	0	0
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-692	-673	ATGGCTTGATTCGTGCTTCT	10.6	2.5e-06	-12.894	5.600	1	1
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-693	-674	GAAGCACGAATCAAGCCATG	9.0	1.4e-05	-11.199	4.864	2	2
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-705	-686	AAGCCATGGNNNNNNNNNNN	5.9	2.3e-04	-8.357	3.629	3	3
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	limit	START_END	D	-1501	199	.	0	0	0	0
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-418	-399	ATGGCTTGATTCGTGCTTCC	9.4	9.1e-06	-11.606	5.041	1	1
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-419	-400	GAAGCACGAATCAAGCCATC	7.9	4.0e-05	-10.121	4.396	2	2
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-312	-293	ACAACATGATTCATGCAGAT	7.3	7.0e-05	-9.566	4.154	3	3
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-311	-292	TCTGCATGAATCATGTTGTC	6.9	1.0e-04	-9.209	4.000	4	4
HanXRQr2_Chr13g0574171|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr13g0574171	limit	START_END	D	-1501	199	.	0	0	0	0
HanXRQr2_Chr13g0574171|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr13g0574171	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-175	-156	GATGCATGAGAATGGCCTTG	7.1	8.4e-05	-9.386	4.076	1	1
HanXRQr2_Chr13g0574171|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr13g0574171	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-74	-55	GATGCATGAGAATGGCCTTA	7.0	9.2e-05	-9.289	4.034	2	2
HanXRQr2_Chr13g0574181|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr13g0574181	limit	START_END	D	-1501	199	.	0	0	0	0
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	limit	START_END	D	-1501	199	.	0	0	0	0
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-208	-189	TTTGCATGAAACATGCCAAT	11.0	1.6e-06	-13.372	5.807	1	1
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-154	-135	ATGTCATGTTACATGGCTTT	9.7	6.7e-06	-11.908	5.172	2	2
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-209	-190	TTGGCATGTTTCATGCAAAC	9.4	9.1e-06	-11.606	5.041	3	3
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-153	-134	AAGCCATGTAACATGACATA	9.3	1.0e-05	-11.504	4.996	4	4
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1213	-1194	CGACCCTTGCACATGCCAAT	6.5	1.4e-04	-8.854	3.845	5	5
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1004	-985	TAGCCATGGCGTACACCCGC	5.8	2.6e-04	-8.266	3.590	6	6
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1214	-1195	TTGGCATGTGCAAGGGTCGA	5.4	3.5e-04	-7.949	3.452	7	7
gene25542|Medicago_truncatula.MtrunA17r50ANR.60|gene25542	limit	START_END	D	-1501	199	.	0	0	0	0
gene25542|Medicago_truncatula.MtrunA17r50ANR.60|gene25542	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-243	-224	ATAGCAAGATATATGTTACT	5.4	3.5e-04	-7.949	3.452	1	1
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	limit	START_END	D	-1501	199	.	0	0	0	0
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-131	-112	AAGGCATGAGACAGGCCGAG	13.6	5.4e-08	-16.740	7.270	1	1
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-132	-113	TCGGCCTGTCTCATGCCTTT	13.4	7.1e-08	-16.455	7.146	2	2
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-379	-360	TCGTAATGGATCGGGCCAGA	8.6	2.1e-05	-10.789	4.686	3	3
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-436	-417	CTGGCCTCGATCTTGGCGGG	7.8	4.5e-05	-10.017	4.351	4	4
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-437	-418	CCGCCAAGATCGAGGCCAGT	6.5	1.4e-04	-8.854	3.845	5	5
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-665	-646	CGTGAATGTCAGGTGCCTAC	6.1	2.0e-04	-8.523	3.702	6	6
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-378	-359	CTGGCCCGATCCATTACGAG	5.2	4.2e-04	-7.781	3.379	7	7
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-79	-60	TGGGCTTGGAACGCCCGTTT	5.0	4.9e-04	-7.623	3.311	8	8
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	limit	START_END	D	-1501	199	.	0	0	0	0
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	53	72	TTGGCATGTCCTATGCCTTT	12.3	3.2e-07	-14.962	6.498	1	1
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	29	48	CCAGCATGGGGCAGGCCGAA	12.0	4.6e-07	-14.586	6.334	2	2
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	54	73	AAGGCATAGGACATGCCAAG	11.9	5.2e-07	-14.462	6.281	3	3
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	28	47	TCGGCCTGCCCCATGCTGGA	11.4	9.6e-07	-13.851	6.015	4	4
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	58	77	GTTGCTTGGCATGTCCTATG	6.0	2.2e-04	-8.432	3.662	5	5
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-440	-421	GGTGTATGTAACATGTTGTT	5.5	3.3e-04	-8.021	3.484	6	6
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-376	-357	ATGCTTTGACACGTGGCCCA	5.1	4.5e-04	-7.710	3.348	7	7
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	limit	START_END	D	-1501	199	.	0	0	0	0
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-52	-33	AAGGCATGGGACATGCCGAG	16.0	9.4e-10	-20.790	9.029	1	1
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-53	-34	TCGGCATGTCCCATGCCTTT	14.5	1.3e-08	-18.154	7.884	2	2
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-77	-58	CCGGCATGGGACAGGCCGAA	14.3	1.8e-08	-17.837	7.746	3	3
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-78	-59	TCGGCCTGTCCCATGCCGGA	13.4	7.1e-08	-16.455	7.146	4	4
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1159	-1140	ACGGGACGGCCCGTCCCGTT	10.9	1.8e-06	-13.254	5.756	5	5
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1327	-1308	GCGGGACGGGACATGACGGG	10.6	2.5e-06	-12.894	5.600	6	6
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1328	-1309	CCGTCATGTCCCGTCCCGCC	9.8	6.1e-06	-12.014	5.218	7	7
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1160	-1141	ACGGGACGGGCCGTCCCGTC	9.6	7.5e-06	-11.803	5.126	8	8
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1169	-1150	CCGGAATGGGACGGGACGGC	8.9	1.5e-05	-11.098	4.820	9	9
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1203	-1184	ACGGGACGGAACACGACGCG	8.7	1.9e-05	-10.888	4.729	10	10
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1312	-1293	ACGGGATGGGACGGGACAAA	8.3	2.7e-05	-10.505	4.562	11	11
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1218	-1199	ACGGAATGAAACAGGACGGG	8.1	3.4e-05	-10.302	4.474	12	12
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1204	-1185	GCGTCGTGTTCCGTCCCGTC	8.0	3.7e-05	-10.207	4.433	13	13
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1164	-1145	ATGGGACGGGACGGCCCGTC	7.9	4.0e-05	-10.121	4.396	14	14
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1191	-1172	ACGACGCGGGACGGGACCGG	7.3	7.0e-05	-9.566	4.154	15	15
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1165	-1146	ACGGGCCGTCCCGTCCCATT	7.2	7.7e-05	-9.467	4.111	16	16
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1219	-1200	CCGTCCTGTTTCATTCCGTC	6.3	1.7e-04	-8.692	3.775	17	17
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1196	-1177	GGAACACGACGCGGGACGGG	6.3	1.7e-04	-8.692	3.775	18	18
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1170	-1151	CCGTCCCGTCCCATTCCGGT	6.2	1.8e-04	-8.599	3.734	19	19
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1341	-1322	AGGACGTGGGATAGGCGGGA	6.0	2.2e-04	-8.432	3.662	20	20
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-48	-29	ATTGCTCGGCATGTCCCATG	5.9	2.3e-04	-8.357	3.629	21	21
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1197	-1178	CCGTCCCGCGTCGTGTTCCG	5.8	2.6e-04	-8.266	3.590	22	22
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1192	-1173	CGGTCCCGTCCCGCGTCGTG	5.6	3.0e-04	-8.111	3.522	23	23
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1313	-1294	TTGTCCCGTCCCATCCCGTC	5.5	3.3e-04	-8.021	3.484	24	24
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	limit	START_END	D	-1501	199	.	0	0	0	0
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-115	-96	AAGGCATGGGACGGGCCGAG	14.4	1.5e-08	-17.996	7.815	1	1
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-116	-97	TCGGCCCGTCCCATGCCTTT	11.3	1.1e-06	-13.730	5.963	2	2
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-111	-92	ATTGCTCGGCCCGTCCCATG	7.9	4.0e-05	-10.121	4.396	3	3
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-110	-91	ATGGGACGGGCCGAGCAATT	7.1	8.4e-05	-9.386	4.076	4	4
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-90	-71	TTGGCGTGAATATTGCTCTT	6.5	1.4e-04	-8.854	3.845	5	5
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-65	-46	TGGGCTTGGAACGGCCGTTT	5.5	3.3e-04	-8.021	3.484	6	6
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	limit	START_END	D	-1501	199	.	0	0	0	0
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	45	64	GCGGCGTGCTTCGAGCTGTT	10.5	2.8e-06	-12.792	5.555	1	1
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	1	20	TTGCGATGTTTCATGCCTTT	9.1	1.3e-05	-11.290	4.903	2	2
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	2	21	AAGGCATGAAACATCGCAAA	9.0	1.4e-05	-11.199	4.864	3	3
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	46	65	ACAGCTCGAAGCACGCCGCT	8.1	3.4e-05	-10.302	4.474	4	4
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-241	-222	NNNNNNNNNNNNNNGCCGCT	5.4	3.5e-04	-7.949	3.452	5	5
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-242	-223	GCGGCNNNNNNNNNNNNNNN	5.0	4.9e-04	-7.623	3.311	6	6
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	limit	START_END	D	-1501	199	.	0	0	0	0
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	23	42	TAAGCATGGTGAGAGCCATA	8.6	2.1e-05	-10.789	4.686	1	1
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-986	-967	GGAGTATGGTTCATGTCTAA	7.4	6.4e-05	-9.657	4.194	2	2
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1465	-1446	TAGGCATGGTTGGTGGAGAA	7.2	7.7e-05	-9.467	4.111	3	3
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1482	-1463	GAAGCGTGAGACTAGGCATG	6.7	1.2e-04	-9.026	3.920	4	4
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-985	-966	TAGACATGAACCATACTCCA	5.6	3.0e-04	-8.111	3.522	5	5
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	limit	START_END	D	-1448	199	.	0	0	0	0
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-891	-872	GAGGCATGGACTATGCATGG	11.1	1.4e-06	-13.479	5.854	1	1
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-890	-871	CATGCATAGTCCATGCCTCT	9.4	9.1e-06	-11.606	5.041	2	2
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-146	-127	ATGGCATGCTTCGTCTACCG	7.8	4.5e-05	-10.017	4.351	3	3
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-902	-883	TATGCATGGTTCTTGTTGCG	7.7	4.9e-05	-9.924	4.310	4	4
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-145	-126	GGTAGACGAAGCATGCCATA	6.2	1.8e-04	-8.599	3.734	5	5
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-899	-880	GAGGCATGGACTATGCATGG	11.1	1.4e-06	-13.479	5.854	1	1
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-898	-879	CATGCATAGTCCATGCCTCT	9.4	9.1e-06	-11.606	5.041	2	2
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-146	-127	ATGGCATGCTTCGTCTACCG	7.8	4.5e-05	-10.017	4.351	3	3
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-910	-891	TATGCATGGTTCTTGTTGCG	7.7	4.9e-05	-9.924	4.310	4	4
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1159	-1140	TCGAGATGAAACTTGCGGTA	5.5	3.3e-04	-8.021	3.484	5	5
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-145	-126	GGTAGACGAAGCATGCCATC	5.2	4.2e-04	-7.781	3.379	6	6
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1256	-1237	TGGGCATGGTTCTTGTTATG	9.0	1.4e-05	-11.199	4.864	1	1
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1244	-1225	GAAGCATGGGACTGGGCATG	9.0	1.4e-05	-11.199	4.864	2	2
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-135	-116	CAAGCATGGTGAGAGCCATA	8.7	1.9e-05	-10.888	4.729	3	3
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1398	-1379	CTGGCATAACTTGTGCAGCG	8.2	3.0e-05	-10.398	4.516	4	4
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1243	-1224	ATGCCCAGTCCCATGCTTCT	6.3	1.7e-04	-8.692	3.775	5	5
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1255	-1236	ATAACAAGAACCATGCCCAG	6.1	2.0e-04	-8.523	3.702	6	6
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1397	-1378	GCTGCACAAGTTATGCCAGA	5.9	2.3e-04	-8.357	3.629	7	7
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-1248	-1229	GAACCATGCCCAGTCCCATG	5.4	3.5e-04	-7.949	3.452	8	8
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-743	-724	CTTACATGTGACGTCCATAT	5.3	3.8e-04	-7.869	3.417	9	9
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	limit	START_END	D	-1459	199	.	0	0	0	0
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1000	-981	TGGGCATGGTTCTTGTTATG	9.0	1.4e-05	-11.199	4.864	1	1
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-988	-969	GAAGCATGGTACTGGGCATG	8.8	1.7e-05	-10.988	4.772	2	2
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-145	-126	CAAGCATGGTGAGAGCCATA	8.7	1.9e-05	-10.888	4.729	3	3
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-999	-980	ATAACAAGAACCATGCCCAG	6.1	2.0e-04	-8.523	3.702	4	4
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-987	-968	ATGCCCAGTACCATGCTTCT	5.8	2.6e-04	-8.266	3.590	5	5
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1115	-1096	CTGACATAACTTGTGCAGCG	5.7	2.8e-04	-8.184	3.554	6	6
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-753	-734	CTTACATGTGACGTCCATAT	5.3	3.8e-04	-7.869	3.417	7	7
A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA	limit	START_END	D	-1426	199	.	0	0	0	0
A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-145	-126	CAAGCATGGTGAGAGCCATA	8.7	1.9e-05	-10.888	4.729	1	1
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	limit	START_END	D	-1501	199	.	0	0	0	0
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-184	-165	CCCGCATGATGCATGTAATG	7.8	4.5e-05	-10.017	4.351	1	1
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-264	-245	CCACCGTGGGGCATGCAACA	7.6	5.3e-05	-9.840	4.274	2	2
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-263	-244	GTTGCATGCCCCACGGTGGT	7.2	7.7e-05	-9.467	4.111	3	3
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-183	-164	ATTACATGCATCATGCGGGC	6.6	1.3e-04	-8.948	3.886	4	4
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-143	-124	ATTACATGTATCTTGTCATT	5.8	2.6e-04	-8.266	3.590	5	5
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	65	84	GTGCCATGTTAATTGCTTGA	5.7	2.8e-04	-8.184	3.554	6	6
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-144	-125	ATGACAAGATACATGTAATT	5.5	3.3e-04	-8.021	3.484	7	7
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-270	-251	TACATATGTTGCATGCCCCA	5.3	3.8e-04	-7.869	3.417	8	8
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	limit	START_END	D	-1501	199	.	0	0	0	0
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-438	-419	CAGCGATCGGACATGCCGGA	9.2	1.1e-05	-11.391	4.947	1	1
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-439	-420	CCGGCATGTCCGATCGCTGA	9.1	1.3e-05	-11.290	4.903	2	2
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-211	-192	ATAACATGGTTCACGCTGGT	8.0	3.7e-05	-10.207	4.433	3	3
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-172	-153	CAAACATGTAACTTGCCATT	8.0	3.7e-05	-10.207	4.433	4	4
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-173	-154	ATGGCAAGTTACATGTTTGG	7.6	5.3e-05	-9.840	4.274	5	5
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-212	-193	CCAGCGTGAACCATGTTATT	7.1	8.4e-05	-9.386	4.076	6	6
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-586	-567	NNNNNNNNNNNNNNGCCGTT	5.3	3.8e-04	-7.869	3.417	7	7
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-1037	-1018	CCTGCATGAGTAANNNNNNN	5.2	4.2e-04	-7.781	3.379	8	8
107763182|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107763182	limit	START_END	D	-1501	199	.	0	0	0	0
107763182|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107763182	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-894	-875	TCTGAATGGCCAGTGCCAAA	6.6	1.3e-04	-8.948	3.886	1	1
107763182|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107763182	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-90	-71	AAAGCATGAGAATTGCAACC	5.3	3.8e-04	-7.869	3.417	2	2
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	limit	START_END	D	-1501	199	.	0	0	0	0
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-84	-65	GTGCTATGTACCATGATATG	5.6	3.0e-04	-8.111	3.522	1	1
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-83	-64	ATATCATGGTACATAGCACC	5.5	3.3e-04	-8.021	3.484	2	2
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	limit	START_END	D	-1501	199	.	0	0	0	0
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-43	-24	ATGGCATGCCAATTGCCTAT	10.1	4.4e-06	-12.336	5.358	1	1
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-44	-25	TAGGCAATTGGCATGCCATG	9.0	1.4e-05	-11.199	4.864	2	2
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-827	-808	CATGCATGATCTGGGGCCGG	5.7	2.8e-04	-8.184	3.554	3	3
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	limit	START_END	D	-1501	199	.	0	0	0	0
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-327	-308	CGCGCATGACACATGTATTT	8.5	2.3e-05	-10.701	4.647	1	1
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-326	-307	AATACATGTGTCATGCGCGT	8.0	3.7e-05	-10.207	4.433	2	2
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-85	-66	TATGCATGGGTCGGGAAGGA	6.7	1.2e-04	-9.026	3.920	3	3
Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915	limit	START_END	D	-773	199	.	0	0	0	0
Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-180	-161	AAAGCATGCTAATTGCTACC	5.9	2.3e-04	-8.357	3.629	1	1
Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	-181	-162	GTAGCAATTAGCATGCTTTT	5.5	3.3e-04	-8.021	3.484	2	2
Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-662	-643	GAGGCGTNNNNNNNNNNNNN	5.0	4.9e-04	-7.623	3.311	3	3
PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000	limit	START_END	D	-233	199	.	0	0	0	0
PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	76	95	AAAGCATGCTAATTGCTACC	5.9	2.3e-04	-8.357	3.629	1	1
PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	R	75	94	GTAGCAATTAGCATGCTTTT	5.5	3.3e-04	-8.021	3.484	2	2
Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0	limit	START_END	D	-1501	199	.	0	0	0	0
Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0	site	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	D	-905	-886	CAGACATGCTTGATCGCCTA	5.3	3.8e-04	-7.869	3.417	1	1
;
; Matrices
;	matrix	name                                      	ncol	nrow	pseudo	Wmin	Wmax	Wrange
;	1	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	20	4	1	-24.900	18.200	43.100	a:0.342 c:0.187 g:0.151 t:0.320 
; Number of sequences scanned	32
; Sum of sequence lengths	51020
; N residues           	10767
; Matches per matrix
;	matrix	name                                      	matches	scored
;	1	dyads_test_vs_ctrl_m2dyads_test_vs_ctrl_m2	149	100824
;		TOTAL          	149	100824
; Host name	rsat
; Job started	2026-06-17.063005
; Job done	2026-06-17.063017
; Seconds	11.93
;	user	11.93
;	system	0.04
;	cuser	0.11
;	csystem	0.01