; matrix-scan -v 1 -matrix_format transfac -m $RSAT/public_html/tmp/www-data/2026/06/17/matrix-scan_2026-06-17.025709_ew37iL.matrix -pseudo 1 -decimals 1 -2str -origin end -offset -200 -bginput -markov 1 -bg_pseudo 0.01 -return limits -return sites -return pval -return rank -lth score 1 -uth pval 1e-2 -i $RSAT/public_html/tmp/www-data/2026/06/17/tmp_sequence_2026-06-17.025709_tKQ0iS.fasta -seq_format fasta -n score ; Slow counting mode ; Input files ; input $RSAT/public_html/tmp/www-data/2026/06/17/tmp_sequence_2026-06-17.025709_tKQ0iS.fasta ; Matrix files ; matrix 1 $RSAT/public_html/tmp/www-data/2026/06/17/matrix-scan_2026-06-17.025709_ew37iL.matrix ; Sequence format fasta ; Pseudo counts 1 ; Background model ; Method input ; Markov order 1 ; Strand undef ; Background pseudo-frequency 0.01 ; Residue probabilities ; a 0.35356 ; c 0.20630 ; g 0.15199 ; t 0.28815 ; Thresholds lower upper ; pval NA 0.01 ; score 1 NA ; Output columns ; 1 seq_id ; 2 ft_type ; 3 ft_name ; 4 strand ; 5 start ; 6 end ; 7 sequence ; 8 weight #seq_id ft_type ft_name strand start end sequence weight Pval ln_Pval sig rank rank_pm AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1 limit START_END D -501 199 . 0 0 0 0 AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -444 -433 TCACATTCCTGT 4.1 1.5e-03 -6.470 2.810 1 1 AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R 22 33 CACCATGCTTAT 3.3 2.5e-03 -5.999 2.605 2 2 AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D 10 21 GNNNNNNNCAGT 2.3 3.9e-03 -5.551 2.411 3 3 AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -227 -216 NNNNNNNNCAAT 2.0 4.5e-03 -5.404 2.347 4 4 AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1 10 CTTCTTCCCGCG 1.9 4.8e-03 -5.349 2.323 5 5 AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -271 -260 CCTCNNNNNNNN 1.2 7.1e-03 -4.955 2.152 6 6 AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -304 -293 ACTCGTCCCAAT 1.1 7.5e-03 -4.886 2.122 7 7 GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D limit START_END D -501 199 . 0 0 0 0 GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D site oligos_6-8nt_m2oligos_6-8nt_m2 D -300 -289 AAACATGCCAGT 9.0 2.1e-05 -10.773 4.679 1 1 GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D site oligos_6-8nt_m2oligos_6-8nt_m2 D -137 -126 AAGCATGCCATA 8.9 2.6e-05 -10.548 4.581 2 2 GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D site oligos_6-8nt_m2oligos_6-8nt_m2 R -139 -128 TGGCATGCTTCG 2.7 3.3e-03 -5.728 2.488 3 3 GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D site oligos_6-8nt_m2oligos_6-8nt_m2 D 125 136 ATTCAACCCTTT 2.4 3.7e-03 -5.592 2.429 4 4 GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D site oligos_6-8nt_m2oligos_6-8nt_m2 R 71 82 CTTTACGCCATT 2.2 4.1e-03 -5.504 2.391 5 5 GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D site oligos_6-8nt_m2oligos_6-8nt_m2 R -349 -338 AATCTTGGCAGA 2.0 4.5e-03 -5.404 2.347 6 6 GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D site oligos_6-8nt_m2oligos_6-8nt_m2 R -194 -183 NNNNNNNNCGAT 2.0 4.5e-03 -5.404 2.347 7 7 GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D site oligos_6-8nt_m2oligos_6-8nt_m2 R 95 106 TTTGATTCCTGT 1.7 5.3e-03 -5.246 2.278 8 8 GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D site oligos_6-8nt_m2oligos_6-8nt_m2 D -358 -347 NNNNNNNNCTCT 1.3 6.6e-03 -5.015 2.178 9 9 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D limit START_END D -501 199 . 0 0 0 0 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D site oligos_6-8nt_m2oligos_6-8nt_m2 D -295 -284 AAACATGCCAGT 9.0 2.1e-05 -10.773 4.679 1 1 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D site oligos_6-8nt_m2oligos_6-8nt_m2 D -137 -126 AAGCATGCCATC 8.1 7.4e-05 -9.506 4.128 2 2 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D site oligos_6-8nt_m2oligos_6-8nt_m2 R -495 -484 ATTCATGACTCA 3.7 2.0e-03 -6.209 2.696 3 3 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D site oligos_6-8nt_m2oligos_6-8nt_m2 R -139 -128 TGGCATGCTTCG 2.7 3.3e-03 -5.728 2.488 4 4 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D site oligos_6-8nt_m2oligos_6-8nt_m2 D -357 -346 ATTCNNNNNNNN 2.3 3.9e-03 -5.551 2.411 5 5 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D site oligos_6-8nt_m2oligos_6-8nt_m2 R 71 82 CTTTACGCCATT 2.2 4.1e-03 -5.504 2.391 6 6 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D site oligos_6-8nt_m2oligos_6-8nt_m2 R -343 -332 AATCTTGGCAGA 2.0 4.5e-03 -5.404 2.347 7 7 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D site oligos_6-8nt_m2oligos_6-8nt_m2 R -194 -183 NNNNNNNNCGAT 2.0 4.5e-03 -5.404 2.347 8 8 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D site oligos_6-8nt_m2oligos_6-8nt_m2 R 95 106 TTTGATTCCTGT 1.7 5.3e-03 -5.246 2.278 9 9 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D site oligos_6-8nt_m2oligos_6-8nt_m2 D -352 -341 NNNNNNNNCTCT 1.3 6.6e-03 -5.015 2.178 10 10 GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D site oligos_6-8nt_m2oligos_6-8nt_m2 R -134 -123 CTAGATGGCATG 1.2 7.1e-03 -4.955 2.152 11 11 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D limit START_END D -501 199 . 0 0 0 0 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 D -295 -284 AAACATGTCTTT 4.4 1.2e-03 -6.702 2.911 1 1 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 D 178 189 GGCCATTCCTGT 3.8 1.9e-03 -6.262 2.719 2 2 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 R -136 -125 CACCATGCTTGT 3.2 2.6e-03 -5.951 2.585 3 3 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 D -278 -267 AAGCTGGCCATA 2.4 3.7e-03 -5.592 2.429 4 4 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 D 173 184 GACGAGGCCATT 2.4 3.7e-03 -5.592 2.429 5 5 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 R -392 -381 CGTCANNNNNNN 2.3 3.9e-03 -5.551 2.411 6 6 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 R 71 82 CTTTACGCCGTT 2.1 4.3e-03 -5.456 2.369 7 7 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 D -390 -379 NNNNNTGACGAG 1.8 5.0e-03 -5.296 2.300 8 8 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 R 95 106 TTTGATTCCTGT 1.7 5.3e-03 -5.246 2.278 9 9 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 D 107 118 GCTCTTCCCGAC 1.5 5.9e-03 -5.134 2.230 10 10 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 R -245 -234 NNNNNNNNCAAA 1.1 7.5e-03 -4.886 2.122 11 11 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 R -160 -149 CCTCTTCCCGCN 1.1 7.5e-03 -4.886 2.122 12 12 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 D 129 140 AACCATTCGAAG 1.1 7.5e-03 -4.886 2.122 13 13 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 R -481 -470 GCACNNNNNNNN 1.0 8.0e-03 -4.831 2.098 14 14 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 D -457 -446 AATCATGGAGTA 1.0 8.0e-03 -4.831 2.098 15 15 GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D site oligos_6-8nt_m2oligos_6-8nt_m2 D -395 -384 TTTNNNNNNNTG 1.0 8.0e-03 -4.831 2.098 16 16 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D limit START_END D -501 199 . 0 0 0 0 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 D -108 -97 TGTCATTCCTTT 5.2 5.8e-04 -7.453 3.237 1 1 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 D -305 -294 AAACATGTCTTT 4.4 1.2e-03 -6.702 2.911 2 2 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 R -146 -135 CACCATGCTTGT 3.2 2.6e-03 -5.951 2.585 3 3 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 D 178 189 GGCCATTCCCGT 3.2 2.6e-03 -5.951 2.585 4 4 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 R -170 -159 TTTCTTCCCGCT 2.6 3.4e-03 -5.684 2.468 5 5 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 D -288 -277 AAGCTGGCCATA 2.4 3.7e-03 -5.592 2.429 6 6 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 D 173 184 GACGAGGCCATT 2.4 3.7e-03 -5.592 2.429 7 7 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 R 71 82 CTTTACGCCGTT 2.1 4.3e-03 -5.456 2.369 8 8 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 R 95 106 TTTGATCCCTGT 2.1 4.3e-03 -5.456 2.369 9 9 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 D -406 -395 TTTNNNNNNNTT 1.5 5.9e-03 -5.134 2.230 10 10 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 D 107 118 GCTCTTCCCGAC 1.5 5.9e-03 -5.134 2.230 11 11 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 D -183 -172 ATACATGTAATA 1.1 7.5e-03 -4.886 2.122 12 12 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 D 129 140 AACCATTCGAAG 1.1 7.5e-03 -4.886 2.122 13 13 GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D site oligos_6-8nt_m2oligos_6-8nt_m2 D -466 -455 AATCATGGAGTA 1.0 8.0e-03 -4.831 2.098 14 14 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA limit START_END D -501 199 . 0 0 0 0 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 D -108 -97 TGTCATTCCTTT 5.2 5.8e-04 -7.453 3.237 1 1 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 D -305 -294 AAACATGTCTTT 4.4 1.2e-03 -6.702 2.911 2 2 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 R -146 -135 CACCATGCTTGT 3.2 2.6e-03 -5.951 2.585 3 3 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 D 178 189 GGCCATTCCCGT 3.2 2.6e-03 -5.951 2.585 4 4 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 R -170 -159 TTTCTTCCCGCT 2.6 3.4e-03 -5.684 2.468 5 5 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 D -288 -277 AAGCTGGCCATA 2.4 3.7e-03 -5.592 2.429 6 6 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 D 173 184 GACGAGGCCATT 2.4 3.7e-03 -5.592 2.429 7 7 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 R 71 82 CTTTACGCCGTT 2.1 4.3e-03 -5.456 2.369 8 8 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 R 95 106 TTTGATCCCTGT 2.1 4.3e-03 -5.456 2.369 9 9 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 D -336 -325 NNNNNNNNCGCT 1.8 5.0e-03 -5.296 2.300 10 10 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 D 107 118 GCTCTTCCCGAC 1.5 5.9e-03 -5.134 2.230 11 11 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 D -183 -172 ATACATGTAATA 1.1 7.5e-03 -4.886 2.122 12 12 A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA site oligos_6-8nt_m2oligos_6-8nt_m2 D 129 140 AACCATTCGAAG 1.1 7.5e-03 -4.886 2.122 13 13 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 limit START_END D -501 199 . 0 0 0 0 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R -18 -7 ATTCATGCCGGG 8.9 2.6e-05 -10.548 4.581 1 1 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R -316 -305 ATTCATCCCATT 6.9 1.6e-04 -8.754 3.802 2 2 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 D -262 -251 TTGCATGCCCCA 6.1 2.4e-04 -8.324 3.615 3 3 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R -98 -87 TAACTTGCCTTA 5.3 5.1e-04 -7.575 3.290 4 4 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 D 74 85 TAACATGGCACC 3.7 2.0e-03 -6.209 2.696 5 5 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R 127 138 CTCCATTCCCTT 3.5 2.3e-03 -6.096 2.647 6 6 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 D -175 -164 CATCATGCGGGC 3.4 2.4e-03 -6.045 2.625 7 7 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R -386 -375 NNNNNNNCCTCT 2.8 3.1e-03 -5.767 2.504 8 8 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 D -182 -171 TTACATGCATCA 2.7 3.3e-03 -5.728 2.488 9 9 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 D -135 -124 TATCTTGTCATT 2.7 3.3e-03 -5.728 2.488 10 10 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R -264 -253 GGGCATGCAACA 2.5 3.6e-03 -5.635 2.447 11 11 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 D -192 -181 CTCCACGACATT 2.5 3.6e-03 -5.635 2.447 12 12 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 D -70 -59 AAACANNNNNNN 2.3 3.9e-03 -5.551 2.411 13 13 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R -438 -427 NNNNNTGTCAAT 2.0 4.5e-03 -5.404 2.347 14 14 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 D -436 -425 TGACANNNNNNN 2.0 4.5e-03 -5.404 2.347 15 15 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 D 11 22 AAGCNNNNNNNT 2.0 4.5e-03 -5.404 2.347 16 16 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R -144 -133 ATACATGTAATT 1.6 5.6e-03 -5.186 2.252 17 17 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 D 63 74 AATCAAGCAATT 1.5 5.9e-03 -5.134 2.230 18 18 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R -355 -344 ACACACGCTTTC 1.3 6.6e-03 -5.015 2.178 19 19 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R -67 -56 TATNNNNNNNTG 1.2 7.1e-03 -4.955 2.152 20 20 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R -80 -69 TTCCATTGCATA 1.1 7.5e-03 -4.886 2.122 21 21 GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400 site oligos_6-8nt_m2oligos_6-8nt_m2 R -433 -422 TTTNNNNNNNTG 1.0 8.0e-03 -4.831 2.098 22 22 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 limit START_END D -501 199 . 0 0 0 0 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 D -430 -419 GGACATGCCGGA 7.4 1.3e-04 -8.984 3.902 1 1 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 D -164 -153 TAACTTGCCATT 6.4 2.0e-04 -8.517 3.699 2 2 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 R -125 -114 NNNNNNNCCAAT 3.5 2.3e-03 -6.096 2.647 3 3 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 D -94 -83 AACCATGCAACA 3.3 2.5e-03 -5.999 2.605 4 4 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 D -203 -192 GTTCACGCTGGT 2.9 3.0e-03 -5.811 2.524 5 5 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 R -104 -93 TTGCANNNNNNN 2.2 4.1e-03 -5.504 2.391 6 6 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 D -345 -334 AATCNNNNNNNN 2.1 4.3e-03 -5.456 2.369 7 7 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 D 169 180 ATTCAACCCTTG 2.0 4.5e-03 -5.404 2.347 8 8 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 R -432 -421 CGGCATGTCCGA 1.7 5.3e-03 -5.246 2.278 9 9 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 R -410 -399 NNNNNNNNCAGA 1.6 5.6e-03 -5.186 2.252 10 10 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 D -11 0 ACTCAAGCAATT 1.6 5.6e-03 -5.186 2.252 11 11 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 D 0 11 TCTCNNNNNNNN 1.6 5.6e-03 -5.186 2.252 12 12 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 D -488 -477 AACCNNNNNNNN 1.4 6.3e-03 -5.069 2.201 13 13 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 R -67 -56 ATTCAACCCAAA 1.4 6.3e-03 -5.069 2.201 14 14 gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931 site oligos_6-8nt_m2oligos_6-8nt_m2 R -212 -201 AACCATGTTATT 1.1 7.5e-03 -4.886 2.122 15 15 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 limit START_END D -501 199 . 0 0 0 0 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 D -19 -8 AATCATACCAGA 5.3 5.1e-04 -7.575 3.290 1 1 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 D -179 -168 AAGCATGCTAAT 4.9 7.8e-04 -7.159 3.109 2 2 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 R -181 -170 TAGCATGCTTTT 4.5 1.1e-03 -6.778 2.944 3 3 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 D -217 -206 ATGCATGCATGT 4.1 1.5e-03 -6.470 2.810 4 4 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 R 182 193 TGACATGTCGAT 4.0 1.7e-03 -6.391 2.776 5 5 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 R -219 -208 ATGCATGCATTA 3.9 1.8e-03 -6.325 2.747 6 6 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 R -215 -204 GTACATGCATGC 3.0 2.9e-03 -5.855 2.543 7 7 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 D 7 18 AACCATGGCCAG 2.8 3.1e-03 -5.767 2.504 8 8 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 D 184 195 CGACATGTCAAA 2.8 3.1e-03 -5.767 2.504 9 9 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 D -101 -90 TCTGTTGCCACT 2.2 4.1e-03 -5.504 2.391 10 10 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 R -497 -486 AATGTTGCCATC 2.0 4.5e-03 -5.404 2.347 11 11 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 R 10 21 GGGCTGGCCATG 1.5 5.9e-03 -5.134 2.230 12 12 Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915 site oligos_6-8nt_m2oligos_6-8nt_m2 D 110 121 ATCCAGCCCCTT 1.3 6.6e-03 -5.015 2.178 13 13 PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000 limit START_END D -233 199 . 0 0 0 0 PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000 site oligos_6-8nt_m2oligos_6-8nt_m2 D 77 88 AAGCATGCTAAT 4.9 7.8e-04 -7.159 3.109 1 1 PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000 site oligos_6-8nt_m2oligos_6-8nt_m2 R 75 86 TAGCATGCTTTT 4.5 1.1e-03 -6.778 2.944 2 2 PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000 site oligos_6-8nt_m2oligos_6-8nt_m2 D 39 50 ATGCATGCATGT 4.1 1.5e-03 -6.470 2.810 3 3 PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000 site oligos_6-8nt_m2oligos_6-8nt_m2 R 37 48 ATGCATGCATTA 3.9 1.8e-03 -6.325 2.747 4 4 PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000 site oligos_6-8nt_m2oligos_6-8nt_m2 R 41 52 GTACATGCATGC 3.0 2.9e-03 -5.855 2.543 5 5 PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000 site oligos_6-8nt_m2oligos_6-8nt_m2 D 155 166 TCTGTTGCCACT 2.2 4.1e-03 -5.504 2.391 6 6 PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000 site oligos_6-8nt_m2oligos_6-8nt_m2 R -220 -209 AGTCCTACCGTT 1.0 8.0e-03 -4.831 2.098 7 7 Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0 limit START_END D -501 199 . 0 0 0 0 Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0 site oligos_6-8nt_m2oligos_6-8nt_m2 D -85 -74 NNNNNNNCCAGA 3.1 2.7e-03 -5.904 2.564 1 1 Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0 site oligos_6-8nt_m2oligos_6-8nt_m2 R 59 70 CTTTACGCCATT 2.2 4.1e-03 -5.504 2.391 2 2 Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0 site oligos_6-8nt_m2oligos_6-8nt_m2 D -59 -48 CTTCTTCCCAGA 2.0 4.5e-03 -5.404 2.347 3 3 Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0 site oligos_6-8nt_m2oligos_6-8nt_m2 R 117 128 CTTCATGGGGTT 1.1 7.5e-03 -4.886 2.122 4 4 ; ; Matrices ; matrix name ncol nrow pseudo Wmin Wmax Wrange ; 1 oligos_6-8nt_m2oligos_6-8nt_m2 12 4 1 -23.100 11.000 34.100 a:0.354 c:0.206 g:0.152 t:0.288 ; Number of sequences scanned 11 ; Sum of sequence lengths 7443 ; N residues 1059 ; Matches per matrix ; matrix name matches scored ; 1 oligos_6-8nt_m2oligos_6-8nt_m2 131 14644 ; TOTAL 131 14644 ; Host name rsat ; Job started 2026-06-17.025709 ; Job done 2026-06-17.025711 ; Seconds 1.54 ; user 1.54 ; system 0.02 ; cuser 0.1 ; csystem 0.03