; matrix-scan  -v 1 -matrix_format transfac -m $RSAT/public_html/tmp/www-data/2026/06/17/matrix-scan_2026-06-17.033308_Fj4jvn.matrix -pseudo 1 -decimals 1 -2str -origin end -offset -200 -bginput -markov 1 -bg_pseudo 0.01 -return limits -return sites -return pval -return rank -lth score 1 -uth pval 1e-4 -i $RSAT/public_html/tmp/www-data/2026/06/17/tmp_sequence_2026-06-17.033308_pKp9mf.fasta -seq_format fasta -n score
; Slow counting mode            
; Input files
;	input	$RSAT/public_html/tmp/www-data/2026/06/17/tmp_sequence_2026-06-17.033308_pKp9mf.fasta
; Matrix files
;	matrix 1	$RSAT/public_html/tmp/www-data/2026/06/17/matrix-scan_2026-06-17.033308_Fj4jvn.matrix
; Sequence format      	fasta
; Pseudo counts        	1
; Background model
;	Method        	input
;	Markov order  	1
;	Strand        	undef
;	Background pseudo-frequency	0.01
;	Residue probabilities
;		a	0.32771
;		c	0.20496
;		g	0.15721
;		t	0.31013
; Thresholds	lower	upper
;	pval  	NA	0.0001
;	score 	1    	NA
; Output columns
;	1	seq_id
;	2	ft_type
;	3	ft_name
;	4	strand
;	5	start
;	6	end
;	7	sequence
;	8	weight
#seq_id	ft_type	ft_name	strand	start	end	sequence	weight	Pval	ln_Pval	sig	rank	rank_pm
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	limit	START_END	D	-501	199	.	0	0	0	0
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	24	41	AAGCATGGTGAGAGCCAT	6.4	7.3e-05	-9.521	4.135	1	1
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	limit	START_END	D	-501	199	.	0	0	0	0
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	limit	START_END	D	-501	199	.	0	0	0	0
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	limit	START_END	D	-501	199	.	0	0	0	0
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-134	-117	AAGCATGGTGAGAGCCAT	6.4	7.3e-05	-9.521	4.135	1	1
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	limit	START_END	D	-501	199	.	0	0	0	0
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-144	-127	AAGCATGGTGAGAGCCAT	6.4	7.3e-05	-9.521	4.135	1	1
A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA	limit	START_END	D	-501	199	.	0	0	0	0
A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-144	-127	AAGCATGGTGAGAGCCAT	6.4	7.3e-05	-9.521	4.135	1	1
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	limit	START_END	D	-501	199	.	0	0	0	0
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-183	-166	CCGCATGATGCATGTAAT	7.2	4.2e-05	-10.074	4.375	1	1
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	limit	START_END	D	-501	199	.	0	0	0	0
107763182|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107763182	limit	START_END	D	-501	199	.	0	0	0	0
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	limit	START_END	D	-501	199	.	0	0	0	0
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	limit	START_END	D	-501	199	.	0	0	0	0
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-42	-25	TGGCATGCCAATTGCCTA	9.1	1.0e-05	-11.511	4.999	1	1
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-43	-26	AGGCAATTGGCATGCCAT	6.5	6.9e-05	-9.582	4.162	2	2
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	limit	START_END	D	-501	199	.	0	0	0	0
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-326	-309	GCGCATGACACATGTATT	8.1	2.2e-05	-10.735	4.662	1	1
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-83	-66	CTTCCCGACCCATGCATA	7.3	3.9e-05	-10.153	4.409	2	2
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-84	-67	ATGCATGGGTCGGGAAGG	6.1	9.0e-05	-9.317	4.046	3	3
Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915	limit	START_END	D	-501	199	.	0	0	0	0
PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000	limit	START_END	D	-233	199	.	0	0	0	0
Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0	limit	START_END	D	-501	199	.	0	0	0	0
AT3G12900|Arabidopsis_thaliana.TAIR10.60|AT3G12900	limit	START_END	D	-501	199	.	0	0	0	0
AT3G12900|Arabidopsis_thaliana.TAIR10.60|AT3G12900	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-420	-403	GTGCATGCGTCTCGCCAT	8.4	1.7e-05	-10.970	4.764	1	1
GSBRNA2T00000146001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g26300D	limit	START_END	D	-501	199	.	0	0	0	0
GSBRNA2T00000146001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g26300D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-226	-209	AAGCATGTATAATGCCAA	9.6	6.7e-06	-11.919	5.176	1	1
GSBRNA2T00020767001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73310D	limit	START_END	D	-501	199	.	0	0	0	0
GSBRNA2T00020768001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73320D	limit	START_END	D	-501	199	.	0	0	0	0
GSBRNA2T00020768001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73320D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-244	-227	AAGCGTGTATAATGCCAT	6.8	5.6e-05	-9.791	4.252	1	1
GSBRNA2T00026360001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC01g38190D	limit	START_END	D	-501	199	.	0	0	0	0
A01p052810.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A01p052810.1_BraROA	limit	START_END	D	-501	199	.	0	0	0	0
A01p052810.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A01p052810.1_BraROA	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-217	-200	AGGCGTGTATAGTGCCAA	8.0	2.3e-05	-10.660	4.629	1	1
A01p052810.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A01p052810.1_BraROA	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-279	-262	GTACATGAGCCACGCCTC	6.3	7.9e-05	-9.452	4.105	2	2
A03p039990.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p039990.1_BraROA	limit	START_END	D	-501	199	.	0	0	0	0
A03p039990.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p039990.1_BraROA	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-248	-231	AAGCGTGTATAATGCCAT	6.8	5.6e-05	-9.791	4.252	1	1
A05p046620.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A05p046620.1_BraROA	limit	START_END	D	-501	199	.	0	0	0	0
A05p046620.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A05p046620.1_BraROA	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-186	-169	AAGCATGTATAATGCCAA	9.6	6.7e-06	-11.919	5.176	1	1
GLYMA_08G169100|Glycine_max.Glycine_max_v2.1.60|GLYMA_08G169100	limit	START_END	D	-501	199	.	0	0	0	0
gene-Lalb_Chr20g0108651|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0108651	limit	START_END	D	-501	199	.	0	0	0	0
gene-Lalb_Chr20g0108651|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0108651	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-24	-7	AGGCCTGAATCTTGCCAC	11.6	1.1e-06	-13.696	5.948	1	1
gene-Lalb_Chr20g0108651|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0108651	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-25	-8	TGGCAAGATTCAGGCCTC	9.5	7.2e-06	-11.844	5.144	2	2
gene-Lalb_Chr20g0108651|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0108651	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-335	-318	TAGCATGAAAAAGGCCAC	7.6	3.1e-05	-10.371	4.504	3	3
gene-Lalb_Chr01g0015881|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr01g0015881	limit	START_END	D	-501	199	.	0	0	0	0
gene-Lalb_Chr01g0015881|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr01g0015881	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-497	-480	ATGCATGAANNNNNNNNN	6.3	7.9e-05	-9.452	4.105	1	1
107821681|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107821681	limit	START_END	D	-501	199	.	0	0	0	0
Prudul26B035414|Prunus_dulcis.ALMONDv2.60|Prudul26B035414	limit	START_END	D	-501	199	.	0	0	0	0
PRUPE_4G138300|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_4G138300	limit	START_END	D	-501	199	.	0	0	0	0
AT4G31940|Arabidopsis_thaliana.TAIR10.60|CYP82C4	limit	START_END	D	-501	199	.	0	0	0	0
AT4G31940|Arabidopsis_thaliana.TAIR10.60|CYP82C4	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-357	-340	ATGCATGGATCTTGCAAG	7.9	2.5e-05	-10.592	4.600	1	1
AT4G31940|Arabidopsis_thaliana.TAIR10.60|CYP82C4	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-85	-68	GTGTATGTCTCATGCGTT	7.9	2.5e-05	-10.592	4.600	2	2
GSBRNA2T00011262001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g67210D	limit	START_END	D	-501	199	.	0	0	0	0
GSBRNA2T00011262001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g67210D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-132	-115	ATGCATGGATCTTGCAGG	9.1	1.0e-05	-11.511	4.999	1	1
GSBRNA2T00011262001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g67210D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-133	-116	CTGCAAGATCCATGCATG	6.9	5.2e-05	-9.868	4.286	2	2
GSBRNA2T00021899001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA08g12300D	limit	START_END	D	-501	199	.	0	0	0	0
GSBRNA2T00021899001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA08g12300D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-132	-115	ATGCATGGATCTTGCAGG	9.1	1.0e-05	-11.511	4.999	1	1
GSBRNA2T00021899001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA08g12300D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-133	-116	CTGCAAGATCCATGCATG	6.9	5.2e-05	-9.868	4.286	2	2
A08p025520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A08p025520.1_BraROA	limit	START_END	D	-501	199	.	0	0	0	0
A08p025520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A08p025520.1_BraROA	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-73	-56	ATGCATGGATCTTGCAGG	9.1	1.0e-05	-11.511	4.999	1	1
A08p025520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A08p025520.1_BraROA	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-74	-57	CTGCAAGATCCATGCATG	6.9	5.2e-05	-9.868	4.286	2	2
GLYMA_04G035600|Glycine_max.Glycine_max_v2.1.60|GLYMA_04G035600	limit	START_END	D	-501	199	.	0	0	0	0
GLYMA_04G035600|Glycine_max.Glycine_max_v2.1.60|GLYMA_04G035600	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-85	-68	TAGCATGAAGCATGCCGT	12.6	4.2e-07	-14.685	6.378	1	1
GLYMA_04G035600|Glycine_max.Glycine_max_v2.1.60|GLYMA_04G035600	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-84	-67	CGGCATGCTTCATGCTAG	9.7	6.1e-06	-12.002	5.212	2	2
gene-Lalb_Chr23g0266791|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr23g0266791	limit	START_END	D	-501	199	.	0	0	0	0
gene-Lalb_Chr23g0266791|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr23g0266791	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-61	-44	TAGCATAAAGCATGCCTA	7.0	4.9e-05	-9.932	4.313	1	1
gene-Lalb_Chr23g0266791|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr23g0266791	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-479	-462	TGGCCTGAACAATGCTTT	6.4	7.3e-05	-9.521	4.135	2	2
gene-Lalb_Chr23g0266791|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr23g0266791	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-480	-463	AAGCATTGTTCAGGCCAC	5.9	1.0e-04	-9.183	3.988	3	3
107782393|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107782393	limit	START_END	D	-501	199	.	0	0	0	0
107782393|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107782393	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-224	-207	AAACATGTACCATGCCGT	8.8	1.3e-05	-11.273	4.896	1	1
107782393|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107782393	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-225	-208	CGGCATGGTACATGTTTG	8.0	2.3e-05	-10.660	4.629	2	2
107782393|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107782393	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	138	155	ATGCTCGACGACTGCCTA	7.8	2.7e-05	-10.511	4.565	3	3
107790829|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107790829	limit	START_END	D	-501	199	.	0	0	0	0
107790829|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107790829	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-342	-325	ATGCATGTACCATGCCGT	15.2	1.8e-08	-17.829	7.743	1	1
107790829|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107790829	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-343	-326	CGGCATGGTACATGCATG	12.6	4.2e-07	-14.685	6.378	2	2
Prudul26B028905|Prunus_dulcis.ALMONDv2.60|Prudul26B028905	limit	START_END	D	-501	199	.	0	0	0	0
Prudul26B028905|Prunus_dulcis.ALMONDv2.60|Prudul26B028905	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-99	-82	CAGCATGAGACATGCCAA	13.5	1.6e-07	-15.669	6.805	1	1
Prudul26B028905|Prunus_dulcis.ALMONDv2.60|Prudul26B028905	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-122	-105	TTGCATGCCCCTTGCCTT	10.3	3.6e-06	-12.521	5.438	2	2
Prudul26B028905|Prunus_dulcis.ALMONDv2.60|Prudul26B028905	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-98	-81	TGGCATGTCTCATGCTGC	10.1	4.4e-06	-12.340	5.359	3	3
Prudul26B028905|Prunus_dulcis.ALMONDv2.60|Prudul26B028905	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-123	-106	AGGCAAGGGGCATGCAAG	7.2	4.2e-05	-10.074	4.375	4	4
PRUPE_1G387700|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_1G387700	limit	START_END	D	-501	199	.	0	0	0	0
PRUPE_1G387700|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_1G387700	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-99	-82	CAGCATGAGACATGCCAA	13.5	1.6e-07	-15.669	6.805	1	1
PRUPE_1G387700|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_1G387700	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-122	-105	TTGCATGCCCCTTGCCTT	10.3	3.6e-06	-12.521	5.438	2	2
PRUPE_1G387700|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_1G387700	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-98	-81	TGGCATGTCTCATGCTGC	10.1	4.4e-06	-12.340	5.359	3	3
PRUPE_1G387700|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_1G387700	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-123	-106	AGGCAAGGGGCATGCAAG	7.2	4.2e-05	-10.074	4.375	4	4
gene:Solyc12g088970.1.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|gene:Solyc12g088970.1.ITAG4.0	limit	START_END	D	-501	199	.	0	0	0	0
gene:Solyc12g088970.1.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|gene:Solyc12g088970.1.ITAG4.0	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-150	-133	TGGCATGGTGCATGTTTT	5.9	1.0e-04	-9.183	3.988	1	1
AT1G28680|Arabidopsis_thaliana.TAIR10.60|AT1G28680	limit	START_END	D	-1	199	.	0	0	0	0
GSBRNA2T00056005001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA09g27140D	limit	START_END	D	-501	199	.	0	0	0	0
GSBRNA2T00056005001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA09g27140D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-129	-112	ATGCATTAATCTTGCCTT	8.2	2.0e-05	-10.810	4.695	1	1
GSBRNA2T00056005001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA09g27140D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-130	-113	AGGCAAGATTAATGCATT	6.6	6.4e-05	-9.658	4.195	2	2
GSBRNA2T00046289001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g22050D	limit	START_END	D	-501	199	.	0	0	0	0
GSBRNA2T00046289001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g22050D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-125	-108	AGGCAAGATTAATGCCTT	9.8	5.6e-06	-12.086	5.249	1	1
GSBRNA2T00046289001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g22050D	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-124	-107	AGGCATTAATCTTGCCTT	9.5	7.2e-06	-11.844	5.144	2	2
A09p048520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A09p048520.1_BraROA	limit	START_END	D	-501	199	.	0	0	0	0
A09p048520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A09p048520.1_BraROA	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-129	-112	ATGCATTAATCTTGCCTT	8.2	2.0e-05	-10.810	4.695	1	1
A09p048520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A09p048520.1_BraROA	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-130	-113	AGGCAAGATTAATGCATT	6.6	6.4e-05	-9.658	4.195	2	2
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	limit	START_END	D	-501	199	.	0	0	0	0
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	140	157	CAGCAGGAGTCATGCCAT	10.1	4.4e-06	-12.340	5.359	1	1
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	139	156	TGGCATGACTCCTGCTGT	9.4	7.8e-06	-11.762	5.108	2	2
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	77	94	CAGCATGCTCCACGTCGT	6.4	7.3e-05	-9.521	4.135	3	3
gene-Lalb_Chr20g0121341|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0121341	limit	START_END	D	-501	199	.	0	0	0	0
gene-Lalb_Chr20g0121341|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0121341	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	28	45	CAGCATGCACCACGTCGT	6.3	7.9e-05	-9.452	4.105	1	1
107773785|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107773785	limit	START_END	D	-501	199	.	0	0	0	0
Prudul26B009025|Prunus_dulcis.ALMONDv2.60|Prudul26B009025	limit	START_END	D	-501	199	.	0	0	0	0
Prudul26B009025|Prunus_dulcis.ALMONDv2.60|Prudul26B009025	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-76	-59	CGGCATGCCCCACGTCGC	9.0	1.1e-05	-11.439	4.968	1	1
Prudul26B009025|Prunus_dulcis.ALMONDv2.60|Prudul26B009025	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	R	-77	-60	CGACGTGGGGCATGCCGC	8.6	1.5e-05	-11.117	4.828	2	2
PRUPE_4G057600|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_4G057600	limit	START_END	D	-345	199	.	0	0	0	0
PRUPE_4G057600|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_4G057600	site	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	D	-77	-60	CCGCATGCTCCACGTCGC	6.1	9.0e-05	-9.317	4.046	1	1
Solyc04g079720.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc04g079720.ITAG4.0	limit	START_END	D	-501	199	.	0	0	0	0
;
; Matrices
;	matrix	name                                      	ncol	nrow	pseudo	Wmin	Wmax	Wrange
;	1	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	18	4	1	-38.000	18.700	56.700	a:0.328 c:0.205 g:0.157 t:0.310 
; Number of sequences scanned	50
; Sum of sequence lengths	34126
; N residues           	3290
; Matches per matrix
;	matrix	name                                      	matches	scored
;	1	dyads_test_vs_ctrl_m1dyads_test_vs_ctrl_m1	61	66552
;		TOTAL          	61	66552
; Host name	rsat
; Job started	2026-06-17.033309
; Job done	2026-06-17.033316
; Seconds	7.56
;	user	7.56
;	system	0.02
;	cuser	0.11
;	csystem	0.02