; matrix-scan  -v 1 -matrix_format transfac -m $RSAT/public_html/tmp/www-data/2026/06/17/matrix-scan_2026-06-17.062228_3crDZi.matrix -pseudo 1 -decimals 1 -2str -origin end -offset -200 -bginput -markov 1 -bg_pseudo 0.01 -return limits -return sites -return pval -return rank -lth score 5 -uth pval 1e-3 -i $RSAT/public_html/tmp/www-data/2026/06/17/tmp_sequence_2026-06-17.062228_eISaWO.fasta -seq_format fasta -n score
; Slow counting mode            
; Input files
;	input	$RSAT/public_html/tmp/www-data/2026/06/17/tmp_sequence_2026-06-17.062228_eISaWO.fasta
; Matrix files
;	matrix 1	$RSAT/public_html/tmp/www-data/2026/06/17/matrix-scan_2026-06-17.062228_3crDZi.matrix
; Sequence format      	fasta
; Pseudo counts        	1
; Background model
;	Method        	input
;	Markov order  	1
;	Strand        	undef
;	Background pseudo-frequency	0.01
;	Residue probabilities
;		a	0.34242
;		c	0.18661
;		g	0.15145
;		t	0.31953
; Thresholds	lower	upper
;	pval  	NA	0.001
;	score 	5    	NA
; Output columns
;	1	seq_id
;	2	ft_type
;	3	ft_name
;	4	strand
;	5	start
;	6	end
;	7	sequence
;	8	weight
#seq_id	ft_type	ft_name	strand	start	end	sequence	weight	Pval	ln_Pval	sig	rank	rank_pm
BVRB_3g059400|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_3g059400	limit	START_END	D	-255	199	.	0	0	0	0
BVRB_3g059400|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_3g059400	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-137	-125	GAATCATGCCTTT	9.7	7.1e-06	-11.861	5.151	1	1
BVRB_4g096340|Beta_vulgaris.RefBeet-1.2.2.60|BVRB_4g096340	limit	START_END	D	-1501	199	.	0	0	0	0
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	limit	START_END	D	-1501	199	.	0	0	0	0
T459_03445|Capsicum_annuum.ASM51225v2.60|T459_03445	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-542	-530	AAGTAATGCCAAA	6.5	2.1e-04	-8.476	3.681	1	1
T459_31204|Capsicum_annuum.ASM51225v2.60|T459_31204	limit	START_END	D	-1501	199	.	0	0	0	0
T459_31204|Capsicum_annuum.ASM51225v2.60|T459_31204	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-122	-110	GTTTCATGCCACT	10.8	6.3e-07	-14.280	6.202	1	1
T459_31204|Capsicum_annuum.ASM51225v2.60|T459_31204	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1403	-1391	GAGTTATGCCAAT	7.6	6.8e-05	-9.603	4.171	2	2
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	limit	START_END	D	-1501	199	.	0	0	0	0
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-106	-94	GATTCATGCCTTT	10.6	1.1e-06	-13.758	5.975	1	1
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-62	-50	GAAGCATGCCGCT	7.8	5.7e-05	-9.769	4.243	2	2
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-803	-791	GTTACTTGCCAAA	6.1	3.1e-04	-8.095	3.516	3	3
AUR62023693.v1.0|Chenopodium_quinoa.PI614886.392.v1.JGI|AUR62023693.v1.0	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-378	-366	GGATCATTCCATT	5.5	5.2e-04	-7.561	3.284	4	4
Cla97C08G153070|Citrullus_lanatus.Cla97_v1.62|Cla97C08G153070	limit	START_END	D	-1501	199	.	0	0	0	0
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	limit	START_END	D	-1501	199	.	0	0	0	0
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-693	-681	GAATCAAGCCATG	6.7	1.7e-04	-8.679	3.769	1	1
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	3	15	GAATTATGCCNNN	6.7	1.7e-04	-8.679	3.769	2	2
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-321	-309	ATATCATGNNNNN	5.5	5.2e-04	-7.561	3.284	3	3
MELO3C011439.2|Cucumis_melo.Melonv4.60|MELO3C011439.2	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1042	-1030	TGTTCATCCCTTC	5.0	7.6e-04	-7.176	3.117	4	4
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	limit	START_END	D	-1501	199	.	0	0	0	0
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-312	-300	GATTCATGCAGAT	6.8	1.5e-04	-8.783	3.814	1	1
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-419	-407	GAATCAAGCCATC	6.7	1.7e-04	-8.679	3.769	2	2
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	17	29	GAATTATGCCTAT	6.7	1.7e-04	-8.679	3.769	3	3
Csa_6G366300|Cucumis_sativus.ASM407v2.60|Csa_6G366300	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1109	-1097	GACTCACGCCCTT	6.6	1.9e-04	-8.587	3.729	4	4
HanXRQr2_Chr13g0574171|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr13g0574171	limit	START_END	D	-1501	199	.	0	0	0	0
HanXRQr2_Chr13g0574181|Helianthus_annuus.HanXRQr2.0-SUNRISE.60|HanXRQr2_Chr13g0574181	limit	START_END	D	-1501	199	.	0	0	0	0
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	limit	START_END	D	-1501	199	.	0	0	0	0
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-201	-189	GAAACATGCCAAT	8.3	3.7e-05	-10.210	4.434	1	1
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-209	-197	GTTTCATGCAAAC	6.6	1.9e-04	-8.587	3.729	2	2
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1206	-1194	TGCACATGCCAAT	6.4	2.3e-04	-8.387	3.643	3	3
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-712	-700	TCTTCAAGCCTAA	5.5	5.2e-04	-7.561	3.284	4	4
gene-LSAT_8X33320|Lactuca_sativa.Lsat_Salinas_v7.60|gene-LSAT_8X33320	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-146	-134	GTAACATGACATA	5.2	6.6e-04	-7.323	3.180	5	5
gene25542|Medicago_truncatula.MtrunA17r50ANR.60|gene25542	limit	START_END	D	-1501	199	.	0	0	0	0
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	limit	START_END	D	-1501	199	.	0	0	0	0
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-132	-120	GTCTCATGCCTTT	8.9	2.1e-05	-10.771	4.678	1	1
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-107	-95	TATTCACGCCAAA	8.1	4.4e-05	-10.025	4.354	2	2
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1092	-1080	CATTCTCGCCATA	6.1	3.1e-04	-8.095	3.516	3	3
107761937|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107761937	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-124	-112	GAGACAGGCCGAG	5.1	7.1e-04	-7.257	3.152	4	4
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	limit	START_END	D	-1501	199	.	0	0	0	0
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	78	90	TATTCACGCCGAA	7.6	6.8e-05	-9.603	4.171	1	1
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	61	73	AGGACATGCCAAG	6.8	1.5e-04	-8.783	3.814	2	2
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-381	-369	GAGTCATGCTTTG	6.7	1.7e-04	-8.679	3.769	3	3
107793142|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107793142	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	179	191	CATTCATCCCAAG	6.4	2.3e-04	-8.387	3.643	4	4
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	limit	START_END	D	-1501	199	.	0	0	0	0
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-28	-16	TATTCACGCCGAA	7.6	6.8e-05	-9.603	4.171	1	1
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-45	-33	GGGACATGCCGAG	7.1	1.1e-04	-9.097	3.951	2	2
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-693	-681	GAGTCATGCTTTG	6.7	1.7e-04	-8.679	3.769	3	3
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	82	94	CATTCATCCCAAG	6.4	2.3e-04	-8.387	3.643	4	4
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-53	-41	GTCCCATGCCTTT	6.2	2.8e-04	-8.177	3.551	5	5
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-78	-66	GTCCCATGCCGGA	5.9	3.7e-04	-7.909	3.435	6	6
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-925	-913	GATGCATGCTTAT	5.8	4.0e-04	-7.813	3.393	7	7
107759548|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107759548	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-1219	-1207	GTTTCATTCCGTC	5.4	5.6e-04	-7.489	3.252	8	8
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	limit	START_END	D	-1501	199	.	0	0	0	0
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-91	-79	TATTCACGCCAAA	8.1	4.4e-05	-10.025	4.354	1	1
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-116	-104	GTCCCATGCCTTT	6.2	2.8e-04	-8.177	3.551	2	2
107812499|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107812499	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-791	-779	TTGTCATTCCATA	5.0	7.6e-04	-7.176	3.117	3	3
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	limit	START_END	D	-1501	199	.	0	0	0	0
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	1	13	GTTTCATGCCTTT	10.0	3.8e-06	-12.475	5.418	1	1
gene-LOC110794951|Spinacia_oleracea.GCF020520425.1.RefSeq|gene-LOC110794951	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	53	65	GAAGCACGCCGCT	5.9	3.7e-04	-7.909	3.435	2	2
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	limit	START_END	D	-1501	199	.	0	0	0	0
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1486	-1474	CAACCATGCCTAG	6.0	3.4e-04	-7.994	3.472	1	1
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1457	-1445	CAACCATGCCTAG	6.0	3.4e-04	-7.994	3.472	2	2
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-986	-974	GGTTCATGTCTAA	5.9	3.7e-04	-7.909	3.435	3	3
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1228	-1216	GAGTCATGACCTT	5.6	4.8e-04	-7.650	3.322	4	4
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-1030	-1018	TGTAAATGCCATT	5.1	7.1e-04	-7.257	3.152	5	5
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	limit	START_END	D	-1448	199	.	0	0	0	0
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-138	-126	GAAGCATGCCATA	8.9	2.1e-05	-10.771	4.678	1	1
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-301	-289	AAAACATGCCAGT	7.1	1.1e-04	-9.097	3.951	2	2
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-883	-871	AGTCCATGCCTCT	6.4	2.3e-04	-8.387	3.643	3	3
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	71	83	CCTTTACGCCATT	5.2	6.6e-04	-7.323	3.180	4	4
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-138	-126	GAAGCATGCCATC	8.4	3.4e-05	-10.288	4.468	1	1
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-296	-284	CAAACATGCCAGT	7.3	9.1e-05	-9.304	4.041	2	2
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-891	-879	AGTCCATGCCTCT	6.4	2.3e-04	-8.387	3.643	3	3
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-495	-483	TATTCATGACTCA	5.8	4.0e-04	-7.813	3.393	4	4
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	71	83	CCTTTACGCCATT	5.2	6.6e-04	-7.323	3.180	5	5
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1390	-1378	AAGTTATGCCAGA	6.3	2.5e-04	-8.288	3.599	1	1
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-1261	-1249	TTGTTATGCCACT	6.0	3.4e-04	-7.994	3.472	2	2
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-540	-528	TATTCATGACTCA	5.8	4.0e-04	-7.813	3.393	3	3
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1248	-1236	GAACCATGCCCAG	5.6	4.8e-04	-7.650	3.322	4	4
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1104	-1092	GCTACATGACAAC	5.6	4.8e-04	-7.650	3.322	5	5
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	limit	START_END	D	-1459	199	.	0	0	0	0
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-1005	-993	TTGTTATGCCACG	6.0	3.4e-04	-7.994	3.472	1	1
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-550	-538	TATTCATGACTCA	5.8	4.0e-04	-7.813	3.393	2	2
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-992	-980	GAACCATGCCCAG	5.6	4.8e-04	-7.650	3.322	3	3
A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA	limit	START_END	D	-1426	199	.	0	0	0	0
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	limit	START_END	D	-1501	199	.	0	0	0	0
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-18	-6	AATTCATGCCGGG	8.4	3.4e-05	-10.288	4.468	1	1
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-316	-304	CATTCATCCCATT	7.1	1.1e-04	-9.097	3.951	2	2
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-804	-792	CGGTCATGCTATC	6.7	1.7e-04	-8.679	3.769	3	3
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-263	-251	GTTGCATGCCCCA	6.6	1.9e-04	-8.587	3.729	4	4
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-176	-164	GCATCATGCGGGC	5.8	4.0e-04	-7.813	3.393	5	5
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	limit	START_END	D	-1501	199	.	0	0	0	0
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-431	-419	CGGACATGCCGGA	6.7	1.7e-04	-8.679	3.769	1	1
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-165	-153	GTAACTTGCCATT	5.8	4.0e-04	-7.813	3.393	2	2
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-877	-865	GAAACATGACATT	5.1	7.1e-04	-7.257	3.152	3	3
107763182|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107763182	limit	START_END	D	-1501	199	.	0	0	0	0
107763182|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107763182	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-491	-479	AAAACATGCCAAG	6.7	1.7e-04	-8.679	3.769	1	1
107763182|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107763182	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-729	-717	CCATTATGCCACA	5.9	3.7e-04	-7.909	3.435	2	2
107763182|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107763182	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-754	-742	GACACTTGCCATT	5.7	4.4e-04	-7.727	3.356	3	3
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	limit	START_END	D	-1501	199	.	0	0	0	0
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-132	-120	AAATCATGCGGCA	5.3	6.1e-04	-7.409	3.218	1	1
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	limit	START_END	D	-1501	199	.	0	0	0	0
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-43	-31	ATGGCATGCCAAT	7.1	1.1e-04	-9.097	3.951	1	1
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-547	-535	GATACATGCTAAT	7.0	1.3e-04	-8.985	3.902	2	2
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-44	-32	TTGGCATGCCATG	6.9	1.4e-04	-8.900	3.865	3	3
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-48	-36	CTTTCATGGCATG	5.9	3.7e-04	-7.909	3.435	4	4
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	139	151	ACTCCATGCCCTT	5.8	4.0e-04	-7.813	3.393	5	5
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	limit	START_END	D	-1501	199	.	0	0	0	0
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-319	-307	GTGTCATGCGCGT	6.3	2.5e-04	-8.288	3.599	1	1
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	-1292	-1280	CACTTATGCCACA	5.9	3.7e-04	-7.909	3.435	2	2
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-514	-502	GTTTATTGCCAGA	5.1	7.1e-04	-7.257	3.152	3	3
Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915	limit	START_END	D	-773	199	.	0	0	0	0
Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-20	-8	AAATCATACCAGA	5.2	6.6e-04	-7.323	3.180	1	1
PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000	limit	START_END	D	-233	199	.	0	0	0	0
Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0	limit	START_END	D	-1501	199	.	0	0	0	0
Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0	site	oligos_6-8nt_m4oligos_6-8nt_m4	D	-1274	-1262	AGATCATGACATA	5.9	3.7e-04	-7.909	3.435	1	1
Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0	site	oligos_6-8nt_m4oligos_6-8nt_m4	R	59	71	CCTTTACGCCATT	5.2	6.6e-04	-7.323	3.180	2	2
;
; Matrices
;	matrix	name                          	ncol	nrow	pseudo	Wmin	Wmax	Wrange
;	1	oligos_6-8nt_m4oligos_6-8nt_m4	13	4	1	-22.400	11.900	34.300	a:0.342 c:0.187 g:0.151 t:0.320 
; Number of sequences scanned	32
; Sum of sequence lengths	51020
; N residues           	10767
; Matches per matrix
;	matrix	name                          	matches	scored
;	1	oligos_6-8nt_m4oligos_6-8nt_m4	87	101272
;		TOTAL          	87	101272
; Host name	rsat
; Job started	2026-06-17.062228
; Job done	2026-06-17.062237
; Seconds	8.58
;	user	8.58
;	system	0.02
;	cuser	0.12
;	csystem	0.01