; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2026/06/17/oligo-analysis_2026-06-17.142027_KBUGvS_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2026/06/17/oligo-analysis_2026-06-17.142027_KBUGvS_pssm_count_matrices.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2026/06/17/oligo-analysis_2026-06-17.142027_KBUGvS_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2026/06/17/oligo-analysis_2026-06-17.142027_KBUGvS_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 10 11 0 28 0 28 0 0 10 13
c 5 4 28 0 0 0 0 0 5 5
g 5 5 0 0 28 0 0 28 6 3
t 8 8 0 0 0 0 28 0 7 7
//
a 1 5 1 11 0 0 0 11 0 0 10 5 4
c 4 0 1 1 0 0 12 0 12 12 1 1 0
g 2 2 9 0 0 0 0 0 0 0 0 2 1
t 5 5 1 0 12 12 0 1 0 0 1 4 7
//
a 6 7 13 13 0 0 0 0 3 4
c 1 3 0 0 13 0 13 13 5 3
g 3 1 0 0 0 13 0 0 1 1
t 3 2 0 0 0 0 0 0 4 5
//
a 47 38 6 105 15 122 9 117 117 51 43
c 22 22 3 9 101 2 5 4 3 25 25
g 20 25 3 2 7 2 6 4 1 24 29
t 39 43 116 12 5 2 108 3 7 28 31
//
a 26 18 7 77 76 78 8 8 81 80 32 35
c 20 19 1 1 1 2 1 7 3 3 13 10
g 10 19 4 0 2 2 2 65 0 0 16 11
t 28 28 72 6 5 2 73 4 0 1 23 28
//
a 22 22 9 7 0 1 72 69 3 70 29 14
c 12 18 51 7 0 67 1 1 63 0 7 17
g 11 10 6 5 3 3 0 0 4 3 16 14
t 30 25 9 56 72 4 2 5 5 2 23 30
//
a 20 24 50 8 2 5 3 54 4 25 19
c 4 3 3 0 1 1 1 0 2 5 6
g 18 19 2 45 48 46 50 1 46 14 13
t 13 9 0 2 4 3 1 0 3 11 17
//
a 19 16 0 50 50 50 0 50 22 11
c 10 4 0 0 0 0 0 0 10 7
g 13 6 0 0 0 0 50 0 4 16
t 8 24 50 0 0 0 0 0 14 16
//
a 10 6 0 0 21 0 0 21 5 5
c 4 1 21 0 0 0 0 0 6 7
g 3 6 0 21 0 0 0 0 5 3
t 4 8 0 0 0 21 21 0 5 6
//
a 4 3 0 0 0 0 0 0 5 3
c 7 6 20 20 20 0 0 20 5 6
g 1 3 0 0 0 0 0 0 0 6
t 8 8 0 0 0 20 20 0 10 5
//
; Host name rsat
; Job started 2026-06-17.142033
; Job done 2026-06-17.142033
; Seconds 0.15
; user 0.15
; system 0.01
; cuser 0
; csystem 0