; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/06/17/oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/06/17/oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/06/17/oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/06/17/oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/06/17/oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	10	11	0	28	0	28	0	0	10	13
c	5	4	28	0	0	0	0	0	5	5
g	5	5	0	0	28	0	0	28	6	3
t	8	8	0	0	0	0	28	0	7	7
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m1_rc.png
;
a	1	5	1	11	0	0	0	11	0	0	10	5	4
c	4	0	1	1	0	0	12	0	12	12	1	1	0
g	2	2	9	0	0	0	0	0	0	0	0	2	1
t	5	5	1	0	12	12	0	1	0	0	1	4	7
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m2_rc.png
;
a	20	18	3	2	0	1	59	56	3	57	23	12
c	10	14	51	4	0	54	1	1	50	0	6	13
g	8	9	5	0	3	3	0	0	4	3	13	11
t	24	21	3	56	59	4	2	5	5	2	20	26
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m3_rc.png
;
a	10	13	29	5	0	3	1	28	2	25	10	9
c	3	1	0	0	0	1	0	0	1	1	4	5
g	8	9	0	23	27	24	28	1	24	2	7	7
t	8	6	0	1	2	1	0	0	2	1	8	8
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m4_rc.png
;
a	6	7	13	13	0	0	0	0	3	4
c	1	3	0	0	13	0	13	13	5	3
g	3	1	0	0	0	13	0	0	1	1
t	3	2	0	0	0	0	0	0	4	5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m5_rc.png
;
a	47	38	6	105	15	122	9	117	117	51	43
c	22	22	3	9	101	2	5	4	3	25	25
g	20	25	3	2	7	2	6	4	1	24	29
t	39	43	116	12	5	2	108	3	7	28	31
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m6_rc.png
;
a	21	22	12	42	51	40	2	1	62	63	4	20	23
c	18	11	5	6	3	7	0	1	2	0	3	10	9
g	6	11	3	5	4	2	0	62	0	0	52	10	4
t	19	20	44	11	6	15	62	0	0	1	5	24	28
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m7_rc.png
;
a	47	44	27	0	0	0	0	125	49	32
c	34	15	29	125	0	0	0	0	16	33
g	13	22	19	0	0	0	0	0	19	24
t	31	44	50	0	125	125	125	0	41	36
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m8_rc.png
;
a	11	8	0	0	44	0	44	14	10
c	10	12	44	0	0	0	0	11	12
g	3	10	0	44	0	0	0	7	7
t	20	14	0	0	0	44	0	12	15
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m9_rc.png
;
a	10	6	0	0	21	0	0	21	5	5
c	4	1	21	0	0	0	0	0	6	7
g	3	6	0	21	0	0	0	0	5	3
t	4	8	0	0	0	21	21	0	5	6
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m10_rc.png
;
a	29	21	20	18	3	2	0	1	68	60	5	67	29	16
c	4	18	20	24	58	5	0	62	1	3	54	0	7	15
g	10	13	8	9	6	0	4	3	0	3	6	3	13	13
t	29	20	24	21	5	65	68	6	3	6	7	2	23	28
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/17//oligo-analysis_2026-06-17.142701_4DoJCc_pssm_count_matrices_logo_m11_rc.png
;
; Host name	rsat
; Job started	2026-06-17.142708
; Job done	2026-06-17.142711
; Seconds	0.2
;	user	0.2
;	system	0.09
;	cuser	2.6
;	csystem	0.53