; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2026/06/18/oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/06/18/oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/06/18/oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2026/06/18/oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2026/06/18/oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 361 408 694 858 253 55 40 10 49 987 201 139 461 409
c 190 169 80 60 9 43 941 1000 945 11 45 57 105 126
g 144 122 61 31 762 924 24 12 11 21 40 44 112 181
t 350 346 210 96 21 23 40 23 40 26 759 805 367 329
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m1_rc.png
;
a 411 448 865 1069 932 104 53 51 84 1109 211 159 476 461
c 225 220 82 33 9 49 1045 1067 1036 16 61 65 156 168
g 173 144 73 29 230 972 37 24 29 29 51 58 140 236
t 383 380 172 61 21 67 57 50 43 38 869 910 420 327
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m2_rc.png
;
a 405 458 821 926 237 60 36 28 89 1071 810 156 448 441
c 201 170 64 47 12 64 997 1052 976 16 45 79 146 167
g 159 136 63 48 836 974 40 17 16 18 40 49 144 202
t 363 364 180 107 43 30 55 31 47 23 233 844 390 318
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m3_rc.png
;
a 161 185 416 50 31 397 30 22 102 76 27 428 183 165
c 169 85 30 442 8 38 469 4 24 413 18 25 131 65
g 82 175 43 12 481 74 11 496 373 7 477 44 84 168
t 127 94 50 35 19 30 29 17 40 43 17 42 141 141
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m4_rc.png
;
a 42 59 14 8 19 6 3 14 14 5 13 11 11 16 15 30 41
c 75 33 21 162 4 139 177 1 130 176 3 33 145 6 28 69 24
g 19 57 10 8 127 11 2 159 10 0 163 10 8 146 14 35 66
t 54 41 145 12 40 34 8 16 36 9 11 136 26 22 133 56 59
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m5_rc.png
;
a 182 191 196 527 29 16 46 38 562 41 536 228 198
c 125 118 110 16 29 518 16 8 18 11 23 104 80
g 136 117 187 29 21 18 507 544 5 535 31 119 175
t 158 175 108 29 522 49 32 11 16 14 11 150 148
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m6_rc.png
;
a 158 193 71 14 18 53 83 29 721 238 206
c 336 75 620 779 6 31 646 11 21 183 117
g 109 254 56 8 772 675 12 762 39 156 276
t 210 291 66 12 17 54 72 11 32 236 214
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m7_rc.png
;
a 149 138 16 20 26 492 36 5 22 34 176 127
c 103 113 14 441 14 11 4 9 440 30 94 100
g 94 76 15 31 484 6 5 3 22 418 105 102
t 187 206 488 41 9 24 488 516 49 51 158 204
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m8_rc.png
;
a 159 156 422 106 32 449 132 19 455 419 22 449 412 139 227
c 123 72 27 286 12 7 278 7 5 36 18 12 23 78 91
g 106 202 17 52 436 23 39 454 25 16 442 23 19 207 92
t 104 62 26 48 12 13 43 12 7 21 10 8 38 68 82
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m9_rc.png
;
a 311 279 61 33 33 37 21 35 65 70 334 383
c 275 539 77 51 1373 41 58 1369 41 1105 502 332
g 312 189 35 37 34 42 19 33 27 70 176 290
t 634 525 1359 1411 92 1412 1434 95 1399 287 520 527
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m10_rc.png
;
a 326 345 796 782 32 61 26 42 25 25 111 687 379 325
c 177 119 50 32 33 15 7 21 950 798 93 61 109 159
g 138 108 51 35 9 924 979 942 18 13 67 80 162 176
t 391 460 135 183 958 32 20 27 39 196 761 204 382 372
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m11_rc.png
;
a 100 105 33 8 22 19 14 45 37 345 17 26 107 105
c 100 128 21 304 348 4 344 322 15 32 18 306 87 113
g 75 52 17 27 16 14 11 15 338 12 10 23 84 97
t 143 133 347 79 32 381 49 36 28 29 373 63 140 103
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m12_rc.png
;
a 71 76 154 29 25 175 23 7 45 34 8 38 183 21 189 75 71
c 69 34 20 172 8 10 185 2 14 172 4 12 27 5 10 54 36
g 48 75 27 13 191 34 5 221 160 4 212 176 4 191 24 37 84
t 45 48 32 19 9 14 20 3 14 23 9 7 19 16 10 67 42
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m13_rc.png
;
a 117 125 23 11 20 19 13 20 22 20 34 50 86 85
c 130 60 35 374 9 308 376 5 62 352 4 265 128 74
g 49 107 21 11 325 17 4 376 25 10 340 30 61 146
t 116 120 333 16 58 68 19 11 303 30 34 67 137 107
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m14_rc.png
;
a 297 364 88 31 66 62 949 77 1038 398 357
c 372 120 855 1001 23 17 97 16 37 196 167
g 179 313 68 28 995 1016 12 1009 29 223 322
t 282 333 119 70 46 35 72 28 26 313 284
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m15_rc.png
;
a 185 188 0 471 0 471 0 471 149 179
c 78 66 471 0 0 0 0 0 94 83
g 82 91 0 0 471 0 471 0 123 87
t 126 126 0 0 0 0 0 0 105 122
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m16_rc.png
;
a 264 260 23 28 58 68 33 44 772 277 280
c 302 194 31 901 15 794 913 10 56 254 157
g 145 226 15 27 804 66 13 931 97 159 309
t 285 316 927 40 119 68 37 11 71 306 250
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m17_rc.png
;
a 38 51 38 166 1 1 4 3 168 2 61 60 47
c 34 35 22 0 2 166 0 3 1 1 68 33 27
g 45 29 94 0 1 0 162 161 0 162 31 24 55
t 54 56 17 5 167 4 5 4 2 6 11 54 42
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m18_rc.png
;
a 255 364 0 822 0 822 0 822 264 317
c 146 124 0 0 0 0 0 0 123 124
g 204 157 822 0 822 0 822 0 250 185
t 217 177 0 0 0 0 0 0 185 196
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m19_rc.png
;
a 373 410 805 926 13 45 24 48 20 21 439 496 432
c 213 143 90 30 24 5 9 54 1130 985 140 158 145
g 148 118 102 44 2 1116 1152 1063 7 10 134 162 192
t 461 524 198 195 1156 29 10 30 38 179 482 379 426
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/06/18//oligo-analysis_2026-06-18.141233_F8lkXE_pssm_count_matrices_logo_m20_rc.png
;
; Host name rsat
; Job started 2026-06-18.141248
; Job done 2026-06-18.141255
; Seconds 0.5
; user 0.5
; system 0.22
; cuser 5.71
; csystem 0.91