; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/07/01/oligo-analysis_2026-07-01.093605_ZJHi28_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/07/01/oligo-analysis_2026-07-01.093605_ZJHi28_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/07/01/oligo-analysis_2026-07-01.093605_ZJHi28_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/07/01/oligo-analysis_2026-07-01.093605_ZJHi28_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/07/01/oligo-analysis_2026-07-01.093605_ZJHi28_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	4	10	12	17	0	1	0	0	0	1	4	8
c	4	2	1	1	0	0	0	0	19	14	4	2
g	4	1	3	0	0	17	19	19	0	0	1	1
t	7	6	3	1	19	1	0	0	0	4	10	8
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/01//oligo-analysis_2026-07-01.093605_ZJHi28_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/01//oligo-analysis_2026-07-01.093605_ZJHi28_pssm_count_matrices_logo_m1_rc.png
;
a	11	10	39	39	39	39	0	0	11	16
c	3	11	0	0	0	0	39	0	5	3
g	7	6	0	0	0	0	0	0	9	5
t	18	12	0	0	0	0	0	39	14	15
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/01//oligo-analysis_2026-07-01.093605_ZJHi28_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/01//oligo-analysis_2026-07-01.093605_ZJHi28_pssm_count_matrices_logo_m2_rc.png
;
a	11	7	17	1	1	1	0	17	0	2	9	6
c	2	1	0	0	17	1	0	1	1	1	1	3
g	2	5	0	0	0	0	0	0	1	14	4	6
t	3	5	1	17	0	16	18	0	16	1	4	3
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/01//oligo-analysis_2026-07-01.093605_ZJHi28_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/01//oligo-analysis_2026-07-01.093605_ZJHi28_pssm_count_matrices_logo_m3_rc.png
;
; Host name	rsat
; Job started	2026-07-01.093611
; Job done	2026-07-01.093612
; Seconds	0.13
;	user	0.13
;	system	0.04
;	cuser	0.71
;	csystem	0.16