/var/www/html/rsat/public_html/tmp/www-data/2026/07/02/matrix-clustering_2026-07-02.140117_qoCFYw/matrix-clustering_tables/alignment_table.tab


id name cluster strand offset_up offset_down width aligned_consensus aligned_consensus_rc
Collection_1_m22_IQSEATRR_RhaR IQSEATRR_RhaR cluster_1 R 4 13 34 ++++YRATCRWWWWYGATYRW+++++++++++++ +++++++++++++wyrATCrwwwwyGATyr++++
Collection_1_m35_VQSEATRR_RhaR VQSEATRR_RhaR cluster_1 R 4 13 34 ++++YRATCRWWWWYGATYRW+++++++++++++ +++++++++++++wyrATCrwwwwyGATyr++++
Collection_1_m27_LDSESTRR_FruR LDSESTRR_FruR cluster_1 D 4 10 34 ++++TGRwAGWwwdTGmWwGAmwd++++++++++ ++++++++++HWKTCWWKCAHWWWCTWYCA++++
Collection_1_m38_LESESTRR_FruR LESESTRR_FruR cluster_1 D 4 10 34 ++++TGAwAGAwwwTGmTwGAmww++++++++++ ++++++++++WWKTCWAKCAWWWTCTWTCA++++
Collection_1_m13_VGSEATRR_RhaR VGSEATRR_RhaR cluster_1 R 4 13 34 ++++YRATCRWTTTYGATCRT+++++++++++++ +++++++++++++ayGAtCraaawyGATyr++++
Collection_1_m44_VPSEATRR_RhaR VPSEATRR_RhaR cluster_1 R 4 13 34 ++++YRATCRWWWWYGATYRW+++++++++++++ +++++++++++++wYRATCrwwwwYGATYR++++
Collection_1_m47_VASEATRR_RhaR_2 VASEATRR_RhaR_2 cluster_1 R 4 13 34 ++++YGAKCRWNNNYGATYRW+++++++++++++ +++++++++++++wyrATCrnnnwyGmTCr++++
Collection_1_m23_IESISTRR_FruR IESISTRR_FruR cluster_1 D 4 10 34 ++++WWAWCWATCAWWWWCWWTCA++++++++++ ++++++++++TGAwwGwwwwTGATwGwTww++++
Collection_1_m40_SKSESTRR_FruR SKSESTRR_FruR cluster_1 D 4 10 34 ++++TGAmwGTTkTTrmmbGTTTT++++++++++ ++++++++++AAAACVKKYAAMAACWKTCA++++
Collection_1_m46_LQSESTRR_FruR LQSESTRR_FruR cluster_1 D 4 10 34 ++++TGawTGwwTTTGrTTGwwwT++++++++++ ++++++++++AWWWCAAYCAAAWWCAWTCA++++
Collection_1_m7_IQSESTRR_FruR IQSESTRR_FruR cluster_1 D 1 3 34 +wwwTGAtTGwTWwTGAAtGwwTwTGAwTgw+++ +++WCAWTCAWAWWCATTCAWWAWCAATCAWWW+
Collection_1_m9_LQSASTRR_FruR LQSASTRR_FruR cluster_1 D 4 0 34 ++++TGAtTGTTTTTGAwTGwwwwTGrwarawww WWWTYTWYCAWWWWCAWTCAAAAACAATCA++++
Collection_1_m5_VESPATRR_UlaR VESPATRR_UlaR cluster_1 D 0 11 34 DWWTAWTCAAAWTTAATCWYWWT+++++++++++ +++++++++++awwrWGATTaaWTTTGAWTAwwh
Collection_1_m16_VESEVTRK_GlmR VESEVTRK_GlmR cluster_2 D 0 0 19 AwsTTTCGawtCGAAAswT AWSTTTCGAWTCGAAASWT
Collection_1_m29_VDSEVTRK_GlmR VDSEVTRK_GlmR cluster_2 D 0 0 19 AwSTTTCGAwTCGAAASwT AWSTTTCGAWTCGAAASWT
Collection_1_m36_VASTVTRN_AgaR VASTVTRN_AgaR cluster_2 D 2 2 19 ++MWWWCRWWWYGWWWK++ ++mwwwcrwwwygwwwk++
Collection_1_m21_VNSKVTRK_PflR VNSKVTRK_PflR cluster_2 D 0 1 19 TAMTTTCRWWYGAAAKTA+ +TAmTTTCrwwyGAAAkTA
Collection_1_m28_VESSVTRS_AgaR2 VESSVTRS_AgaR2 cluster_3 D 0 0 25 YTTTCRnnnnnnnnnnnnnYGAAAR YTTTCRNNNNNNNNNNNNNYGAAAR
Collection_1_m51_VESSVTRN_AgaR2 VESSVTRN_AgaR2 cluster_3 D 0 0 25 STTTCGnnnnnnnnnnnnnCGAAAS STTTCGNNNNNNNNNNNNNCGAAAS
Collection_1_m31_VKSEVTRS_RhaR VKSEVTRS_RhaR cluster_4 R 1 3 20 +TKTCRATTTTTKWCRA+++ +++TyGwmAaaaaTyGAmA+
Collection_1_m42_VKSEVTRN_RhaR VKSEVTRN_RhaR cluster_4 R 1 3 20 +TKTCRANNNNTKTCRA+++ +++TyGAmAnnnnTyGAmA+
Collection_1_m14_VASEVTRS_AgaR VASEVTRS_AgaR cluster_4 R 0 5 20 CTTTCAAAMASTTTC+++++ +++++GAAAsTkTTTGAAAG
Collection_1_m6_VNSTVTRN_AgaR VNSTVTRN_AgaR cluster_4 D 0 0 20 MAAWMRAAAYRAAAYGAAAG CTTTCRTTTyrTTTYkwTTk
Collection_1_m25_AQTPQARR_SufR AQTPQARR_SufR cluster_5 D 0 0 24 WwwAACAACAwwwwTGTTGTTwwW WWWAACAACAWWWWTGTTGTTWWW
Collection_1_m32_ALSPQARR_SufR ALSPQARR_SufR cluster_5 D 0 0 24 TTwAACAACAwmkwTGTTGTTwAA TTWAACAACAWMKWTGTTGTTWAA
Collection_1_m39_AQSPQARR_SufR AQSPQARR_SufR cluster_5 D 0 0 24 TTWARCAACAMWWKTGTTGYTWAA TTWArCAACamwwktGTTGyTWAA
Collection_1_m26_AVSPQARR_SufR AVSPQARR_SufR cluster_5 D 0 0 24 TTTAACAACHAWWTDGTTGTTAAA TTTAACAAChawwtdGTTGTTAAA
Collection_1_m18_SASLQARR_SufR SASLQARR_SufR cluster_5 D 0 0 24 TTDRRCAACRYHDRYGTTGYYHAA TTdRRCAACRYhdRYGTTGYYhAA
Collection_1_m49_VKSDMTRR_LacR VKSDMTRR_LacR cluster_6 D 3 0 22 +++wTGTTTktTwTTGTTTTtT AAAAAACAAWAAMAAACAW+++
Collection_1_m50_VNSDMTRR_LacR VNSDMTRR_LacR cluster_6 D 3 0 22 +++TTGTTTrTTwTTGTTTkTT AAMAAACAAWAAYAAACAA+++
Collection_1_m11_VSTEETRR_RhaR VSTEETRR_RhaR cluster_6 D 2 0 22 ++WAAAWWCAAAMAWAAACAAA TTTGTTTwtKTTTGwWTttw++
Collection_1_m24_TNSDMTRR_LacR TNSDMTRR_LacR cluster_6 D 4 3 22 ++++AAACAYWWWHMAACA+++ +++TGTTKdwWWRTGTTT++++
Collection_1_m12_LDSKNTRR_IolR LDSKNTRR_IolR cluster_6 R 0 1 22 TTTTGRTTATTTTTTKRTWAW+ +wTWAyMAAAAaATaAYCAAaA
Collection_1_m19_MKSMITRR_RhaR MKSMITRR_RhaR cluster_6 D 0 2 22 TTdTSATWAATTwATSAYAA++ ++TTRTSATWAATTWATSAHAA
Collection_1_m3_TESKETRR_FucR TESKETRR_FucR cluster_7 D 0 0 36 aTGmCCGTTTTarwwwwwwwwwwytAAAACGGkCAt ATGMCCGTTTTARWWWWWWWWWWYTAAAACGGKCAT
Collection_1_m30_TESRETRR_FucR TESRETRR_FucR cluster_7 D 0 0 36 wTGmCCGwWTdmramdAWWThktykhAWwCGGkCAw WTGMCCGWWTDMRAMDAWWTHKTYKHAWWCGGKCAW
Collection_1_m10_TESRDTRR_GlcR TESRDTRR_GlcR cluster_8 D 0 0 20 RCTTAwAWTyACTTAwwRAT ATYWWTAAGTRAWTWTAAGY
Collection_1_m45_VESRDTRR_GlcR VESRDTRR_GlcR cluster_8 D 0 3 20 rCTTAThhhhACTTATW+++ +++WATAAGTDDDDATAAGY
Collection_1_m8_ISSEMTYR_CutR ISSEMTYR_CutR cluster_8 D 1 3 20 +AAWATGTGAAAAWRTG+++ +++CAywTTTTCACATWTT+
Collection_1_m34_ITSAMTRR_GalR ITSAMTRR_GalR cluster_9 D 0 0 17 ckrwsmksssmkswymg CKRWSMKSSSMKSWYMG
Collection_1_m41_NC1]MTRR_GalR NC1]MTRR_GalR cluster_9 D 0 0 17 WkrwbmKnnnMkvwymW WKRWBMKNNNMKVWYMW
Collection_1_m2_LKSEMTRR_DeoR LKSEMTRR_DeoR cluster_10 D 0 0 22 twwTGTkAktwwamTmACAwwa TWWTGTKAKTWWAMTMACAWWA
Collection_1_m4_TESPQTRR_GlpR TESPQTRR_GlpR cluster_10 D 0 0 22 wwATGwKCGwwwwCGMwCATww WWATGWKCGWWWWCGMWCATWW
Collection_1_m43_VKSTSTRR_FucR VKSTSTRR_FucR cluster_11 D 0 0 19 AyTTGAAyAwTrTTCAArT AYTTGAAYAWTRTTCAART
Collection_1_m17_AKTTMGRQ_AzrR AKTTMGRQ_AzrR cluster_12 D 0 0 20 CYTTAYwwdRYhwwRTAARG CYTTAYWWDRYHWWRTAARG
Collection_1_m48_AQSTRTYR_SO1758 AQSTRTYR_SO1758 cluster_13 D 0 0 20 ACTGACAkSATSmTGTCAGT ACTGACAKSATSMTGTCAGT
Collection_1_m15_VETGTTRK_SrlR VETGTTRK_SrlR cluster_14 D 0 0 29 AwCTTTCAhhhhhhhhhhhhhATCTTTCA TGAAAGATDDDDDDDDDDDDDTGAAAGWT
Collection_1_m33_VKSTTARD_SufR VKSTTARD_SufR cluster_15 D 0 0 19 ddKyTATTGwCAATArMhh DDKYTATTGWCAATARMHH
Collection_1_m37_VNSKVTRK_PflR VNSKVTRK_PflR cluster_16 D 0 0 21 wCGwAAtwrWwWywaTTwCGw WCGWAATWRWWWYWATTWCGW
Collection_1_m1_IDSTQTRR_CsqR IDSTQTRR_CsqR cluster_17 D 0 0 24 AAAAAkTGACrssyGTCAmTTTTT AAAAAKTGACRSSYGTCAMTTTTT
Collection_1_m20_QPSTRK_MntR_2 QPSTRK_MntR_2 cluster_18 D 0 0 22 TwwyTTAGmCTAGkCTAArwwA TWWYTTAGMCTAGKCTAARWWA